BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00021915
         (2008 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ...   458   e-126
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik...   439   e-120
ref|XP_007014568.1| Pseudouridine synthase isoform 2 [Theobroma ...   437   e-120
ref|XP_007014567.1| Pseudouridine synthase isoform 1 [Theobroma ...   437   e-120
ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622...   434   e-119
ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citr...   434   e-119
ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-lik...   434   e-119
ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-lik...   434   e-119
ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Popu...   432   e-118
ref|XP_006372225.1| tRNA pseudouridine synthase family protein [...   431   e-118
gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]        427   e-117
ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-lik...   412   e-112
ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592...   410   e-112
emb|CBI33811.3| unnamed protein product [Vitis vinifera]              407   e-111
ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mi...   403   e-109
ref|XP_007222727.1| hypothetical protein PRUPE_ppa006478mg [Prun...   400   e-108
ref|XP_007014570.1| Pseudouridine synthase family protein isofor...   397   e-107
ref|XP_007160215.1| hypothetical protein PHAVU_002G302500g [Phas...   395   e-107
gb|AFK45334.1| unknown [Medicago truncatula]                          394   e-107
ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago trun...   394   e-107

>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 443

 Score =  458 bits (1179), Expect = e-126
 Identities = 226/335 (67%), Positives = 261/335 (77%), Gaps = 2/335 (0%)
 Frame = -1

Query: 1819 ENQTEKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSISVLFGT 1640
            E +T+ K+Y HYNHTDSCK  RWT+RE ++FMYARPWQ V DFY N+VNGR S   LF +
Sbjct: 26   ETKTQNKIYFHYNHTDSCKSFRWTARESFQFMYARPWQEVSDFYSNVVNGRLSFLELFRS 85

Query: 1639 KK-FVLDVAEISEAREGTESVRLSAKDRTGRWARVTFKILLSYHGGSFDGWQKQPDLNTV 1463
            +  FV D A+I E    TE    S +DR GRWARV FKI LSYHGGSFDGWQKQP LNTV
Sbjct: 86   QMHFVRDDAKIQEDSNKTELEHFSNEDRFGRWARVNFKIDLSYHGGSFDGWQKQPGLNTV 145

Query: 1462 QGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQVCAFYTWRKDVKPQ 1283
            QGLVEKSLG+FVDEKKAQ+LK+   PLEGCA+VAGRTDKGV+AL+QVC+FYTWRKDV+P 
Sbjct: 146  QGLVEKSLGKFVDEKKAQQLKEACKPLEGCAVVAGRTDKGVSALRQVCSFYTWRKDVRPH 205

Query: 1282 DVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLNDGEEEHCNGSKRD-EN 1106
            ++EDAIN+  PGK+RVISVS+VSR FHPNFSAKWRRY YIFP+NDGE+   +    D EN
Sbjct: 206  EIEDAINSSAPGKIRVISVSEVSRVFHPNFSAKWRRYLYIFPINDGEDSEQSFDSEDLEN 265

Query: 1105 LITNQPHCEQLNGCREYIGGEKDGYLTVDDENEFESGNKPRSFSIHKVNQLLLQLEGKSL 926
            L + + + EQ NGC E    E    L   D++E E   KPR FSI +VNQLL QLEGK L
Sbjct: 266  LRSYEKYDEQRNGCAELTSEEHVEELITSDKDELEGAKKPRIFSICRVNQLLQQLEGKLL 325

Query: 925  SYKMFARDTKASRSTGPPTECFIYHARATEARLPC 821
            SYK+FARDTKASR+ GPPTECFIYHARATEARLPC
Sbjct: 326  SYKIFARDTKASRNVGPPTECFIYHARATEARLPC 360


>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
          Length = 433

 Score =  439 bits (1129), Expect = e-120
 Identities = 218/335 (65%), Positives = 262/335 (78%), Gaps = 3/335 (0%)
 Frame = -1

Query: 1822 MENQTEKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSISVLFG 1643
            MEN+ E KVY+HY HT   K++RWT+RE ++FMY RPWQ VLDFY N+V GR S+  L G
Sbjct: 14   MENEKENKVYVHYTHTHPTKFSRWTARESHQFMYKRPWQQVLDFYSNVVTGRCSLLGLLG 73

Query: 1642 TKKFVLDVAEISEAREGTESVRLSAKDRTGRWARVTFKILLSYHGGSFDGWQKQPDLNTV 1463
             +   +   EI EA + TE   +  KDR GRWAR+TFKI+LSYHG SFDGWQKQP LNTV
Sbjct: 74   IETHPIHDGEIVEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTV 133

Query: 1462 QGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQVCAFYTWRKDVKPQ 1283
            QGLVE SLGRFVDE+KAQ+LK+K+LP+EG   VAGRTDKGVTAL+QVC+FYTW+KDVK Q
Sbjct: 134  QGLVEASLGRFVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVKVQ 193

Query: 1282 DVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLNDGEE-EHCNGSKRD-E 1109
            D+EDAIN   PGKLRVISVS+VSR FHPNFSAKWR YFYIFPLNDG++ E  + ++ D +
Sbjct: 194  DIEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQISENEMDIQ 253

Query: 1108 NLITNQPHCEQLNGC-REYIGGEKDGYLTVDDENEFESGNKPRSFSIHKVNQLLLQLEGK 932
             +  N+ + EQ + C  +Y GGE    L  DD+ EFES  KP +FSI +V+QLL QLEGK
Sbjct: 254  KISFNEKYGEQGSECPAQYNGGENTENLIFDDDGEFESRKKPSTFSISRVDQLLRQLEGK 313

Query: 931  SLSYKMFARDTKASRSTGPPTECFIYHARATEARL 827
             LSYK+FARDTKASR+ GPPTECF++HARATEARL
Sbjct: 314  LLSYKIFARDTKASRNIGPPTECFVFHARATEARL 348


>ref|XP_007014568.1| Pseudouridine synthase isoform 2 [Theobroma cacao]
            gi|508784931|gb|EOY32187.1| Pseudouridine synthase
            isoform 2 [Theobroma cacao]
          Length = 446

 Score =  437 bits (1125), Expect = e-120
 Identities = 215/343 (62%), Positives = 259/343 (75%), Gaps = 2/343 (0%)
 Frame = -1

Query: 1828 SAMENQTEKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSISVL 1649
            S MEN+ E KVY+HYNH+DSC  ARWT+RE Y FMY R WQ V+DFY N+VNGR ++S L
Sbjct: 31   SVMENEAENKVYVHYNHSDSCSSARWTARESYRFMYDRAWQDVIDFYSNVVNGRLTLSTL 90

Query: 1648 FGTKKFVLDVAEISEAREGTESVRLSAKDRTGRWARVTFKILLSYHGGSFDGWQKQPDLN 1469
            FGT+  + D +E  E  +          +R+GRW RVTFKI++SY+GG+FDGWQKQP LN
Sbjct: 91   FGTETSIHDDSETVEVSD-------EKGERSGRWERVTFKIIISYNGGAFDGWQKQPGLN 143

Query: 1468 TVQGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQVCAFYTWRKDVK 1289
            TVQ +VE+SLGRFVDEKKAQ LK+KS PLEGCA+VAGRTDKGV+A++QVC+FYTWRKDVK
Sbjct: 144  TVQEIVERSLGRFVDEKKAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDVK 203

Query: 1288 PQDVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLNDG--EEEHCNGSKR 1115
            P D+EDAIN+  PGKLRV+SVS+VSR FHPNFSAKWR Y YIFPL++   E++ C   K 
Sbjct: 204  PWDIEDAINSVAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQSCENKKE 263

Query: 1114 DENLITNQPHCEQLNGCREYIGGEKDGYLTVDDENEFESGNKPRSFSIHKVNQLLLQLEG 935
             EN I++  + EQ NG  E I  E    L + D    E+ NKP  FS+ +VNQLL QLE 
Sbjct: 264  VENFISDGNYNEQRNGYLENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQLLQQLER 323

Query: 934  KSLSYKMFARDTKASRSTGPPTECFIYHARATEARLPCVEEVH 806
            K LSYKMFARDTKASR+ GPPTECF+YHARA EAR+PC    H
Sbjct: 324  KLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPCSVNDH 366


>ref|XP_007014567.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
            gi|508784930|gb|EOY32186.1| Pseudouridine synthase
            isoform 1 [Theobroma cacao]
          Length = 444

 Score =  437 bits (1124), Expect = e-120
 Identities = 214/338 (63%), Positives = 258/338 (76%), Gaps = 2/338 (0%)
 Frame = -1

Query: 1828 SAMENQTEKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSISVL 1649
            S MEN+ E KVY+HYNH+DSC  ARWT+RE Y FMY R WQ V+DFY N+VNGR ++S L
Sbjct: 31   SVMENEAENKVYVHYNHSDSCSSARWTARESYRFMYDRAWQDVIDFYSNVVNGRLTLSTL 90

Query: 1648 FGTKKFVLDVAEISEAREGTESVRLSAKDRTGRWARVTFKILLSYHGGSFDGWQKQPDLN 1469
            FGT+  + D +E  E  +          +R+GRW RVTFKI++SY+GG+FDGWQKQP LN
Sbjct: 91   FGTETSIHDDSETVEVSD-------EKGERSGRWERVTFKIIISYNGGAFDGWQKQPGLN 143

Query: 1468 TVQGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQVCAFYTWRKDVK 1289
            TVQ +VE+SLGRFVDEKKAQ LK+KS PLEGCA+VAGRTDKGV+A++QVC+FYTWRKDVK
Sbjct: 144  TVQEIVERSLGRFVDEKKAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDVK 203

Query: 1288 PQDVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLNDG--EEEHCNGSKR 1115
            P D+EDAIN+  PGKLRV+SVS+VSR FHPNFSAKWR Y YIFPL++   E++ C   K 
Sbjct: 204  PWDIEDAINSVAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQSCENKKE 263

Query: 1114 DENLITNQPHCEQLNGCREYIGGEKDGYLTVDDENEFESGNKPRSFSIHKVNQLLLQLEG 935
             EN I++  + EQ NG  E I  E    L + D    E+ NKP  FS+ +VNQLL QLE 
Sbjct: 264  VENFISDGNYNEQRNGYLENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQLLQQLER 323

Query: 934  KSLSYKMFARDTKASRSTGPPTECFIYHARATEARLPC 821
            K LSYKMFARDTKASR+ GPPTECF+YHARA EAR+PC
Sbjct: 324  KLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPC 361


>ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622951 [Citrus sinensis]
          Length = 454

 Score =  434 bits (1116), Expect = e-119
 Identities = 225/357 (63%), Positives = 269/357 (75%), Gaps = 11/357 (3%)
 Frame = -1

Query: 1843 KRIRCSAMENQT--EKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNG 1670
            K  R  +ME+Q+  EKKVY+HYNHTDSCK+ARWT++E YEFM ARPWQ V+DFY ++V+G
Sbjct: 27   KAFRRLSMESQSRAEKKVYVHYNHTDSCKFARWTAKESYEFMRARPWQDVVDFYSDIVSG 86

Query: 1669 RSSISVLFGTKKFVL-----DVAEISEAREGTESVRLSAKDR--TGRWARVTFKILLSYH 1511
            R ++S LFGT++        D  EI E   G+++     +DR  +GRWAR  FKI++SYH
Sbjct: 87   RLTLSDLFGTERTRTSSIHNDENEIPEVEAGSDA----NEDRAGSGRWARANFKIVVSYH 142

Query: 1510 GGSFDGWQKQPDLNTVQGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTAL 1331
            G SFDGWQKQPDLNTVQGLVEK LG FVDEK+A+ LK+K  PLEGCA+VAGRTDKGVTAL
Sbjct: 143  GPSFDGWQKQPDLNTVQGLVEKCLGSFVDEKRAKLLKEKCKPLEGCALVAGRTDKGVTAL 202

Query: 1330 KQVCAFYTWRKDVKPQDVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLN 1151
            +QVC+FYTWRKDVKP ++EDAIN+  PGK+RVISVS+VSR FHPNFSAKWRRY YIFPLN
Sbjct: 203  QQVCSFYTWRKDVKPSEIEDAINSAAPGKIRVISVSQVSRVFHPNFSAKWRRYLYIFPLN 262

Query: 1150 DGE--EEHCNGSKRDENLITNQPHCEQLNGCREYIGGEKDGYLTVDDENEFESGNKPRSF 977
            DGE  E+  +     EN  T+    +Q NGC E I       L ++DE  F S  KPR+F
Sbjct: 263  DGEKREQSIDSEVEVENFHTSNNVGKQSNGCYENIEN-----LLINDEGGFGSHEKPRNF 317

Query: 976  SIHKVNQLLLQLEGKSLSYKMFARDTKASRSTGPPTECFIYHARATEARLPCVEEVH 806
            +I +VN LL +LEGK LSYK FARDTKASR+ GPPTECFIYHARATEA LPC    H
Sbjct: 318  TICRVNLLLQRLEGKLLSYKTFARDTKASRNIGPPTECFIYHARATEATLPCPVNDH 374


>ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citrus clementina]
            gi|557556408|gb|ESR66422.1| hypothetical protein
            CICLE_v10008288mg [Citrus clementina]
          Length = 447

 Score =  434 bits (1116), Expect = e-119
 Identities = 225/357 (63%), Positives = 269/357 (75%), Gaps = 11/357 (3%)
 Frame = -1

Query: 1843 KRIRCSAMENQT--EKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNG 1670
            K  R  +ME+Q+  EKKVY+HYNHTDSCK+ARWT++E YEFM ARPWQ V+DFY ++V+G
Sbjct: 20   KAFRRLSMESQSRAEKKVYVHYNHTDSCKFARWTAKESYEFMRARPWQDVVDFYSDIVSG 79

Query: 1669 RSSISVLFGTKKFVL-----DVAEISEAREGTESVRLSAKDR--TGRWARVTFKILLSYH 1511
            R ++S LFGT++        D  EI E   G+++     +DR  +GRWAR  FKI++SYH
Sbjct: 80   RLTLSDLFGTERTRTSSIHNDENEIPEVEAGSDA----NEDRAGSGRWARANFKIVVSYH 135

Query: 1510 GGSFDGWQKQPDLNTVQGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTAL 1331
            G SFDGWQKQPDLNTVQGLVEK LG FVDEK+A+ LK+K  PLEGCA+VAGRTDKGVTAL
Sbjct: 136  GPSFDGWQKQPDLNTVQGLVEKCLGSFVDEKRAKLLKEKCKPLEGCALVAGRTDKGVTAL 195

Query: 1330 KQVCAFYTWRKDVKPQDVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLN 1151
            +QVC+FYTWRKDVKP ++EDAIN+  PGK+RVISVS+VSR FHPNFSAKWRRY YIFPLN
Sbjct: 196  QQVCSFYTWRKDVKPSEIEDAINSAAPGKIRVISVSQVSRVFHPNFSAKWRRYLYIFPLN 255

Query: 1150 DGE--EEHCNGSKRDENLITNQPHCEQLNGCREYIGGEKDGYLTVDDENEFESGNKPRSF 977
            DGE  E+  +     EN  T+    +Q NGC E I       L ++DE  F S  KPR+F
Sbjct: 256  DGEKREQSIDSEVEVENFHTSNNVGKQSNGCYENIEN-----LLINDEGGFGSHEKPRNF 310

Query: 976  SIHKVNQLLLQLEGKSLSYKMFARDTKASRSTGPPTECFIYHARATEARLPCVEEVH 806
            +I +VN LL +LEGK LSYK FARDTKASR+ GPPTECFIYHARATEA LPC    H
Sbjct: 311  TICRVNLLLQRLEGKLLSYKTFARDTKASRNIGPPTECFIYHARATEATLPCPVNDH 367


>ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  434 bits (1116), Expect = e-119
 Identities = 218/345 (63%), Positives = 258/345 (74%), Gaps = 8/345 (2%)
 Frame = -1

Query: 1822 MENQTEKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSISVLFG 1643
            MEN+ ++K YLHYNHTD C+ ARWT+RE Y+FMY RPWQ VLDFY + VNGR S+S L G
Sbjct: 23   MENRAQRKDYLHYNHTDRCRSARWTARESYQFMYGRPWQEVLDFYSHAVNGRFSLSSLLG 82

Query: 1642 TKKFV-LDVAEISEAREGTESVRLSAKDRTGRWARVTFKILLSYHGGSFDGWQKQPDLNT 1466
            T+     D AE        E  R + KD+TGRWAR TFKI+LSY G SFDGWQKQP LNT
Sbjct: 83   TEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNT 142

Query: 1465 VQGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQVCAFYTWRKDVKP 1286
            VQGLVE+SLG+FVDEKKAQ LKDK LPLEGCA+VAGRTDKGVTAL+QVC+FYTWR DVKP
Sbjct: 143  VQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVKP 202

Query: 1285 QDVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLNDGEEEHCNG------ 1124
            QD+ED+IN+  PGKLR  SVS+VSR FHPNFSAKWRRY YI PLNDGE    +       
Sbjct: 203  QDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGENMEPDSTTWENV 262

Query: 1123 -SKRDENLITNQPHCEQLNGCREYIGGEKDGYLTVDDENEFESGNKPRSFSIHKVNQLLL 947
             ++ +EN +      E  NG  + + G  D  +   ++ E  S +KP++FSI +VNQLL 
Sbjct: 263  ENREEENFV----KIEASNG-EKCVDGIHDNLVLSPNDEELVSADKPQTFSITRVNQLLR 317

Query: 946  QLEGKSLSYKMFARDTKASRSTGPPTECFIYHARATEARLPCVEE 812
            +LEGK LSYKMFARDTKASR+ GPPTECF+YHARA E RLPC+E+
Sbjct: 318  KLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLEQ 362


>ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  434 bits (1116), Expect = e-119
 Identities = 218/345 (63%), Positives = 258/345 (74%), Gaps = 8/345 (2%)
 Frame = -1

Query: 1822 MENQTEKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSISVLFG 1643
            MEN+ ++K YLHYNHTD C+ ARWT+RE Y+FMY RPWQ VLDFY + VNGR S+S L G
Sbjct: 23   MENRAQRKDYLHYNHTDRCRSARWTARESYQFMYGRPWQEVLDFYSHAVNGRFSLSSLLG 82

Query: 1642 TKKFV-LDVAEISEAREGTESVRLSAKDRTGRWARVTFKILLSYHGGSFDGWQKQPDLNT 1466
            T+     D AE        E  R + KD+TGRWAR TFKI+LSY G SFDGWQKQP LNT
Sbjct: 83   TEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNT 142

Query: 1465 VQGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQVCAFYTWRKDVKP 1286
            VQGLVE+SLG+FVDEKKAQ LKDK LPLEGCA+VAGRTDKGVTAL+QVC+FYTWR DVKP
Sbjct: 143  VQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVKP 202

Query: 1285 QDVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLNDGEEEHCNG------ 1124
            QD+ED+IN+  PGKLR  SVS+VSR FHPNFSAKWRRY YI PLNDGE    +       
Sbjct: 203  QDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGENMEPDSTTWENV 262

Query: 1123 -SKRDENLITNQPHCEQLNGCREYIGGEKDGYLTVDDENEFESGNKPRSFSIHKVNQLLL 947
             ++ +EN +      E  NG  + + G  D  +   ++ E  S +KP++FSI +VNQLL 
Sbjct: 263  ENREEENFV----KIEASNG-EKCVDGIHDNLVLSPNDQELVSADKPQTFSITRVNQLLR 317

Query: 946  QLEGKSLSYKMFARDTKASRSTGPPTECFIYHARATEARLPCVEE 812
            +LEGK LSYKMFARDTKASR+ GPPTECF+YHARA E RLPC+E+
Sbjct: 318  KLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLEQ 362


>ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Populus trichocarpa]
            gi|550318755|gb|ERP50021.1| hypothetical protein
            POPTR_0018s14400g [Populus trichocarpa]
          Length = 448

 Score =  432 bits (1111), Expect = e-118
 Identities = 218/338 (64%), Positives = 259/338 (76%), Gaps = 5/338 (1%)
 Frame = -1

Query: 1822 MENQTEKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSISVLFG 1643
            ME Q +K VY+ YNHTDSCK++RWT+RE ++FM+ARPWQ V+DFY   VNG+ S+  LFG
Sbjct: 30   MEAQNDK-VYVQYNHTDSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLELFG 88

Query: 1642 TKKFVLD----VAEISEAREGTESVRLSAKDRTGRWARVTFKILLSYHGGSFDGWQKQPD 1475
            T+   +     + E+S      E V  S  D++GRWARVTFKI+LSYHGGSFDGWQKQP 
Sbjct: 89   TQAHDVHCDDKIEEVSNETGLLEGV--SNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPG 146

Query: 1474 LNTVQGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQVCAFYTWRKD 1295
            LNTVQGLVEKSLGRFVDEKKAQ+LK++  PLEGCA VAGRTDKGV+AL+QVC+FYTWRKD
Sbjct: 147  LNTVQGLVEKSLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRKD 206

Query: 1294 VKPQDVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLNDGE-EEHCNGSK 1118
            VKP ++EDAIN+  PGK+RV S+S+VSR FHPNFSAKWRRY YIFPLNDGE  E   G  
Sbjct: 207  VKPHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREEIEGEG 266

Query: 1117 RDENLITNQPHCEQLNGCREYIGGEKDGYLTVDDENEFESGNKPRSFSIHKVNQLLLQLE 938
              EN  +++   +Q N C E    E      + DE+E +   KPRSFS+ +VNQLL QLE
Sbjct: 267  GIENFSSHENCEKQRNECGELASEENVENSIISDEDELQGAKKPRSFSVCRVNQLLQQLE 326

Query: 937  GKSLSYKMFARDTKASRSTGPPTECFIYHARATEARLP 824
            GK LSYKMFARDTKASR+ GPPTECF+YHARATE RLP
Sbjct: 327  GKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLP 364


>ref|XP_006372225.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
            gi|550318756|gb|ERP50022.1| tRNA pseudouridine synthase
            family protein [Populus trichocarpa]
          Length = 457

 Score =  431 bits (1108), Expect = e-118
 Identities = 219/347 (63%), Positives = 259/347 (74%), Gaps = 14/347 (4%)
 Frame = -1

Query: 1822 MENQTEKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSISVLFG 1643
            ME Q +K VY+ YNHTDSCK++RWT+RE ++FM+ARPWQ V+DFY   VNG+ S+  LFG
Sbjct: 30   MEAQNDK-VYVQYNHTDSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLELFG 88

Query: 1642 TKKFVL-------------DVAEISEAREGTESVRLSAKDRTGRWARVTFKILLSYHGGS 1502
            T+ F                + E+S      E V  S  D++GRWARVTFKI+LSYHGGS
Sbjct: 89   TQVFFTMELKKAHDVHCDDKIEEVSNETGLLEGV--SNVDKSGRWARVTFKIVLSYHGGS 146

Query: 1501 FDGWQKQPDLNTVQGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQV 1322
            FDGWQKQP LNTVQGLVEKSLGRFVDEKKAQ+LK++  PLEGCA VAGRTDKGV+AL+QV
Sbjct: 147  FDGWQKQPGLNTVQGLVEKSLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQV 206

Query: 1321 CAFYTWRKDVKPQDVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLNDGE 1142
            C+FYTWRKDVKP ++EDAIN+  PGK+RV S+S+VSR FHPNFSAKWRRY YIFPLNDGE
Sbjct: 207  CSFYTWRKDVKPHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGE 266

Query: 1141 -EEHCNGSKRDENLITNQPHCEQLNGCREYIGGEKDGYLTVDDENEFESGNKPRSFSIHK 965
              E   G    EN  +++   +Q N C E    E      + DE+E +   KPRSFS+ +
Sbjct: 267  NREEIEGEGGIENFSSHENCEKQRNECGELASEENVENSIISDEDELQGAKKPRSFSVCR 326

Query: 964  VNQLLLQLEGKSLSYKMFARDTKASRSTGPPTECFIYHARATEARLP 824
            VNQLL QLEGK LSYKMFARDTKASR+ GPPTECF+YHARATE RLP
Sbjct: 327  VNQLLQQLEGKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLP 373


>gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]
          Length = 446

 Score =  427 bits (1098), Expect = e-117
 Identities = 217/338 (64%), Positives = 256/338 (75%), Gaps = 5/338 (1%)
 Frame = -1

Query: 1822 MENQTEKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSISVLFG 1643
            ME  +  K Y+HYNH+D C+++RWT+RE Y+FMY RPWQ VLDFY NLVNG +S S LF 
Sbjct: 29   METHSTNKDYVHYNHSDPCRFSRWTARESYQFMYGRPWQQVLDFYSNLVNGTTSFSSLFP 88

Query: 1642 T-KKFVLDV----AEISEAREGTESVRLSAKDRTGRWARVTFKILLSYHGGSFDGWQKQP 1478
              KK+ +D     AEI E  +    ++ S ++R+GRWAR TFK++L YHG SFDGWQKQP
Sbjct: 89   LHKKYQVDDDDYDAEIPEISDDKVKLKKS-EERSGRWARATFKVVLGYHGASFDGWQKQP 147

Query: 1477 DLNTVQGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQVCAFYTWRK 1298
             LNTVQGLVE+SLGRFVDEKKAQ LKDK LPLE C +VAGRTDKGVTAL+QVC+FYTWRK
Sbjct: 148  GLNTVQGLVERSLGRFVDEKKAQLLKDKCLPLEACTVVAGRTDKGVTALQQVCSFYTWRK 207

Query: 1297 DVKPQDVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLNDGEEEHCNGSK 1118
            D+  QD+E+AINN   GKL+  SVS+VSR FHPNFSAKWRRY YIFP ND E+E    +K
Sbjct: 208  DITCQDIEEAINNAALGKLKAKSVSEVSRVFHPNFSAKWRRYLYIFPFNDEEDEE-QSNK 266

Query: 1117 RDENLITNQPHCEQLNGCREYIGGEKDGYLTVDDENEFESGNKPRSFSIHKVNQLLLQLE 938
              ENL T +   +  +GC E+   E  G L +DD  E ESG KP SFS+ +V+QLL  LE
Sbjct: 267  NGENLETYE---KIESGCGEW-NDESFGNLIIDDSEELESGKKPSSFSVSRVDQLLRLLE 322

Query: 937  GKSLSYKMFARDTKASRSTGPPTECFIYHARATEARLP 824
            GK LSYKMFARDTKASR+ GPPTECFIYHARA EARLP
Sbjct: 323  GKLLSYKMFARDTKASRNEGPPTECFIYHARAAEARLP 360


>ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum lycopersicum]
          Length = 436

 Score =  412 bits (1058), Expect = e-112
 Identities = 208/347 (59%), Positives = 257/347 (74%), Gaps = 10/347 (2%)
 Frame = -1

Query: 1822 MENQ----TEKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSIS 1655
            MEN     T++KV+ HYNHTDSCK++RWTSRECYEFMYARPW  V+DFY ++V G  S+S
Sbjct: 15   MENSSPTATQQKVHFHYNHTDSCKFSRWTSRECYEFMYARPWHKVVDFYADMVKGHISLS 74

Query: 1654 VLFGTKKFV-LDVAEISEAREGTESVRLSAKDRT----GRWARVTFKILLSYHGGSFDGW 1490
             LFG +     + AEI E  E +E V +  KD++    GRWAR  F I+LSYHGGSFDGW
Sbjct: 75   GLFGKETPADHEDAEIREDHEKSELVNIPVKDKSRDKSGRWARANFMIVLSYHGGSFDGW 134

Query: 1489 QKQPDLNTVQGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQVCAFY 1310
            QKQPDLNTVQGLVE+SLG FVDEKKAQ LKDK+LPLE CA+VAGRTDKGV+A +QVC+FY
Sbjct: 135  QKQPDLNTVQGLVERSLGEFVDEKKAQLLKDKNLPLEACALVAGRTDKGVSASQQVCSFY 194

Query: 1309 TWRKDVKPQDVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLNDGEEEHC 1130
            TWRKDVK +DV+ A++   PGK+RV+S++KVSREFHPNFSAKWR Y YIFP++D   E  
Sbjct: 195  TWRKDVKIEDVKAALDKAAPGKIRVVSLTKVSREFHPNFSAKWRHYLYIFPIDDVLGEKQ 254

Query: 1129 NGSKRDENLITNQPHCEQLNGCREYIGGEKDGYLTVDDENE-FESGNKPRSFSIHKVNQL 953
             G    +  I +  +  Q N C +    +K     +++EN+    GNKP  F + KVN+L
Sbjct: 255  GG----QIWIDDSTNVHQQNEC-DKSDVDKSNVNEINNENDKLVHGNKPTKFEVGKVNRL 309

Query: 952  LLQLEGKSLSYKMFARDTKASRSTGPPTECFIYHARATEARLPCVEE 812
            L QLEGK LSYKMFARDTKASR+ GPPTECF++HARA E  +PC ++
Sbjct: 310  LGQLEGKLLSYKMFARDTKASRNIGPPTECFVFHARAIETSIPCAKD 356


>ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592314 [Solanum tuberosum]
          Length = 436

 Score =  410 bits (1055), Expect = e-112
 Identities = 204/343 (59%), Positives = 253/343 (73%), Gaps = 7/343 (2%)
 Frame = -1

Query: 1819 ENQTEKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSISVLFGT 1640
            +   ++KV+ HYNHTDSCK++RWTSRECYEFMYAR W  V+DFY ++V G +S+S LFG 
Sbjct: 20   QTAAQQKVHFHYNHTDSCKFSRWTSRECYEFMYARLWHKVVDFYADMVKGHTSLSRLFGK 79

Query: 1639 KKFV-LDVAEISEAREGTESVRLSAKDRT----GRWARVTFKILLSYHGGSFDGWQKQPD 1475
            +     + AEI E  E +E V +  KD++    GRWAR  F I+LSYHGGSFDGWQKQPD
Sbjct: 80   ETPADHEDAEIREDHEKSELVNIPVKDKSRDKSGRWARANFMIVLSYHGGSFDGWQKQPD 139

Query: 1474 LNTVQGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQVCAFYTWRKD 1295
            LNTVQGLVE+SLG FVDEKKAQ LKDK+LPLE CA+VAGRTDKGV+A +QVC+FYTWRKD
Sbjct: 140  LNTVQGLVERSLGEFVDEKKAQLLKDKNLPLEACALVAGRTDKGVSASQQVCSFYTWRKD 199

Query: 1294 VKPQDVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLND--GEEEHCNGS 1121
            VK +DV+ A++   PGK+RV+S++KVSREFHPNFSAKWR Y YIFP++D  GE++     
Sbjct: 200  VKIEDVKAALDKAAPGKIRVVSLTKVSREFHPNFSAKWRHYLYIFPIDDVLGEKQ----- 254

Query: 1120 KRDENLITNQPHCEQLNGCREYIGGEKDGYLTVDDENEFESGNKPRSFSIHKVNQLLLQL 941
             R +  I       Q N C +    + +     D+ NE   GNKP  F + KVN+LL QL
Sbjct: 255  -RGQIWIDGSTDVHQQNECGKSDIDKSNVNEINDENNELVHGNKPTKFEVGKVNRLLGQL 313

Query: 940  EGKSLSYKMFARDTKASRSTGPPTECFIYHARATEARLPCVEE 812
            EGK LSYKMFARDTKASR+ GPPTECF++HARA E  +PC ++
Sbjct: 314  EGKLLSYKMFARDTKASRNIGPPTECFVFHARAIETSIPCAKD 356


>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  407 bits (1047), Expect = e-111
 Identities = 208/332 (62%), Positives = 244/332 (73%)
 Frame = -1

Query: 1822 MENQTEKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSISVLFG 1643
            MEN+ E KVY+HY HT   K++RWT+RE ++FMY RPWQ VLDFY N+V GR S+  L G
Sbjct: 14   MENEKENKVYVHYTHTHPTKFSRWTARESHQFMYKRPWQQVLDFYSNVVTGRCSLLGLLG 73

Query: 1642 TKKFVLDVAEISEAREGTESVRLSAKDRTGRWARVTFKILLSYHGGSFDGWQKQPDLNTV 1463
             +   +   EI EA + TE   +  KDR GRWAR+TFKI+LSYHG SFDGWQKQP LNTV
Sbjct: 74   IETHPIHDGEIVEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTV 133

Query: 1462 QGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQVCAFYTWRKDVKPQ 1283
            QGLVE SLGRFVDE+KAQ+LK+K+LP+EG   VAGRTDKGVTAL+QVC+FYTW+KDVK Q
Sbjct: 134  QGLVEASLGRFVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVKVQ 193

Query: 1282 DVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLNDGEEEHCNGSKRDENL 1103
            D+EDAIN   PGKLRVISVS+VSR FHPNFSAKWR YFYIFPLNDG++    G +  EN 
Sbjct: 194  DIEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDD----GEQISEN- 248

Query: 1102 ITNQPHCEQLNGCREYIGGEKDGYLTVDDENEFESGNKPRSFSIHKVNQLLLQLEGKSLS 923
                               E D      +EN      KP +FSI +V+QLL QLEGK LS
Sbjct: 249  -------------------EMDIQKISFNENR----KKPSTFSISRVDQLLRQLEGKLLS 285

Query: 922  YKMFARDTKASRSTGPPTECFIYHARATEARL 827
            YK+FARDTKASR+ GPPTECF++HARATEARL
Sbjct: 286  YKIFARDTKASRNIGPPTECFVFHARATEARL 317


>ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 444

 Score =  403 bits (1035), Expect = e-109
 Identities = 203/342 (59%), Positives = 249/342 (72%), Gaps = 5/342 (1%)
 Frame = -1

Query: 1825 AMENQTEKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSISVLF 1646
            +M N  + + ++HYNHT   KYARWT+RE +EFMYARPWQ V DFYLN+V    S+ +LF
Sbjct: 40   SMNNLRQTETHVHYNHTHPSKYARWTARESFEFMYARPWQRVNDFYLNIVRANLSLPLLF 99

Query: 1645 GTKKFVLDVAE--ISEAREGTESVRLSAKDRTGRWARVTFKILLSYHGGSFDGWQKQPDL 1472
            G +  V+D  +  I+     +E   ++++DR+GRWAR TFKI+LSYHGGSFDGWQKQP L
Sbjct: 100  GAQTLVVDHNDTGIAALSGSSELESVASEDRSGRWARTTFKIILSYHGGSFDGWQKQPGL 159

Query: 1471 NTVQGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQVCAFYTWRKDV 1292
            NTVQ +VE SLG+FVDEKK Q LKDK LP+EGCAIVAGRTDKGVT L+QVC+FYTW+KDV
Sbjct: 160  NTVQSIVEGSLGKFVDEKKTQLLKDKGLPIEGCAIVAGRTDKGVTGLQQVCSFYTWKKDV 219

Query: 1291 KPQDVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLNDGEEEHCNGSKRD 1112
            KP+D+EDAIN+  PGKLRVISVS+VSR FHPNFSAKWRRY YIFPL              
Sbjct: 220  KPRDIEDAINHAAPGKLRVISVSEVSRVFHPNFSAKWRRYLYIFPL-------------- 265

Query: 1111 ENLITNQPHCEQLNGCREYIGGEKDGYLTVDD---ENEFESGNKPRSFSIHKVNQLLLQL 941
                TN  + +Q +   E+    K  Y  + D   ++E E+  K  +FSI KVN+LL +L
Sbjct: 266  ----TNGGYTDQSSDNGEFYDSFK--YNEIHDSASKDELENEKKSYAFSISKVNRLLRKL 319

Query: 940  EGKSLSYKMFARDTKASRSTGPPTECFIYHARATEARLPCVE 815
            EGK LSYKMFARDTKASR+ GPPTECF+YHARA E +LP  +
Sbjct: 320  EGKLLSYKMFARDTKASRNDGPPTECFVYHARAMEVKLPATD 361


>ref|XP_007222727.1| hypothetical protein PRUPE_ppa006478mg [Prunus persica]
            gi|462419663|gb|EMJ23926.1| hypothetical protein
            PRUPE_ppa006478mg [Prunus persica]
          Length = 409

 Score =  400 bits (1027), Expect = e-108
 Identities = 196/333 (58%), Positives = 246/333 (73%), Gaps = 2/333 (0%)
 Frame = -1

Query: 1807 EKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSISVLFGTKKFV 1628
            E KV + YNHTD C +ARWT++EC++FM ARPWQ V+DFY ++V  R  +S L G  K  
Sbjct: 2    ENKVLIQYNHTDPCSFARWTTKECFQFMSARPWQQVMDFYSDVVKDRKPLSALLG--KAC 59

Query: 1627 LDVAEISEAREGTESVRLSAKDRTGRWARVTFKILLSYHGGSFDGWQKQPDLNTVQGLVE 1448
            L  + I+   E        ++D+ GRWAR+TFKI++SYHGGSFDGWQ+QP LNTVQ +VE
Sbjct: 60   LSKSNINNRLESLPP----SQDKGGRWARLTFKIVVSYHGGSFDGWQRQPGLNTVQSVVE 115

Query: 1447 KSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQVCAFYTWRKDVKPQDVEDA 1268
            KSLG+FVDE+KAQ LKDK LPLEG A+VAGRTDKGVTA+ QVC+FYTWRKDVK QD+ DA
Sbjct: 116  KSLGKFVDERKAQMLKDKGLPLEGAALVAGRTDKGVTAVHQVCSFYTWRKDVKSQDITDA 175

Query: 1267 INNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLNDGE--EEHCNGSKRDENLITN 1094
            IN+  PGKLRV+SV++VSR FHPNF+AKWR Y YIFP ND E  E+     +  +N  + 
Sbjct: 176  INSAAPGKLRVVSVTEVSRAFHPNFTAKWRHYLYIFPFNDEEDMEQSNQSGENAQNFKSL 235

Query: 1093 QPHCEQLNGCREYIGGEKDGYLTVDDENEFESGNKPRSFSIHKVNQLLLQLEGKSLSYKM 914
            + + E  NGC +       G L ++D  + E+  KPR F++ +VNQLL +LEGK LSYKM
Sbjct: 236  ENYHEHKNGC-DQCNEANVGNLVINDNEDLET-LKPREFTVSRVNQLLQKLEGKLLSYKM 293

Query: 913  FARDTKASRSTGPPTECFIYHARATEARLPCVE 815
            FARDTK SR+ GPPTECF+YHARA E++LPC E
Sbjct: 294  FARDTKPSRNEGPPTECFLYHARAKESKLPCSE 326


>ref|XP_007014570.1| Pseudouridine synthase family protein isoform 4, partial [Theobroma
            cacao] gi|508784933|gb|EOY32189.1| Pseudouridine synthase
            family protein isoform 4, partial [Theobroma cacao]
          Length = 349

 Score =  397 bits (1019), Expect = e-107
 Identities = 197/317 (62%), Positives = 239/317 (75%), Gaps = 2/317 (0%)
 Frame = -1

Query: 1828 SAMENQTEKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSISVL 1649
            S MEN+ E KVY+HYNH+DSC  ARWT+RE Y FMY R WQ V+DFY N+VNGR ++S L
Sbjct: 31   SVMENEAENKVYVHYNHSDSCSSARWTARESYRFMYDRAWQDVIDFYSNVVNGRLTLSTL 90

Query: 1648 FGTKKFVLDVAEISEAREGTESVRLSAKDRTGRWARVTFKILLSYHGGSFDGWQKQPDLN 1469
            FGT+  + D +E  E  +          +R+GRW RVTFKI++SY+GG+FDGWQKQP LN
Sbjct: 91   FGTETSIHDDSETVEVSD-------EKGERSGRWERVTFKIIISYNGGAFDGWQKQPGLN 143

Query: 1468 TVQGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQVCAFYTWRKDVK 1289
            TVQ +VE+SLGRFVDEKKAQ LK+KS PLEGCA+VAGRTDKGV+A++QVC+FYTWRKDVK
Sbjct: 144  TVQEIVERSLGRFVDEKKAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDVK 203

Query: 1288 PQDVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLNDG--EEEHCNGSKR 1115
            P D+EDAIN+  PGKLRV+SVS+VSR FHPNFSAKWR Y YIFPL++   E++ C   K 
Sbjct: 204  PWDIEDAINSVAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQSCENKKE 263

Query: 1114 DENLITNQPHCEQLNGCREYIGGEKDGYLTVDDENEFESGNKPRSFSIHKVNQLLLQLEG 935
             EN I++  + EQ NG  E I  E    L + D    E+ NKP  FS+ +VNQLL QLE 
Sbjct: 264  VENFISDGNYNEQRNGYLENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQLLQQLER 323

Query: 934  KSLSYKMFARDTKASRS 884
            K LSYKMFARDTKASR+
Sbjct: 324  KLLSYKMFARDTKASRN 340


>ref|XP_007160215.1| hypothetical protein PHAVU_002G302500g [Phaseolus vulgaris]
            gi|561033630|gb|ESW32209.1| hypothetical protein
            PHAVU_002G302500g [Phaseolus vulgaris]
          Length = 440

 Score =  395 bits (1014), Expect = e-107
 Identities = 201/341 (58%), Positives = 246/341 (72%), Gaps = 5/341 (1%)
 Frame = -1

Query: 1819 ENQTEKKVYLHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSISVLFGT 1640
            E ++E + ++HYNHTD  +YARWT+RE ++FMYARPWQ V DFY N+V    S+S+LFG 
Sbjct: 40   EVESETESHVHYNHTDPSEYARWTARESFQFMYARPWQRVNDFYFNVVRANLSLSLLFGP 99

Query: 1639 KKFVLDVAE--ISEAREGTESVRLSAKDRTGRWARVTFKILLSYHGGSFDGWQKQPDLNT 1466
            +  +LD  +  I+   + +E   ++++DR+GRWAR TFKI+LSYHGGSFDGWQKQP LNT
Sbjct: 100  QT-ILDHNDTGIAALSDQSELESVASEDRSGRWARRTFKIILSYHGGSFDGWQKQPGLNT 158

Query: 1465 VQGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQVCAFYTWRKDVKP 1286
            VQG+VE SLG+FVDEKK Q LKDK LP+EGCA+VAGRTDKGVT L+QVC+FYTW+KDVKP
Sbjct: 159  VQGIVEASLGKFVDEKKTQLLKDKGLPIEGCAVVAGRTDKGVTGLQQVCSFYTWKKDVKP 218

Query: 1285 QDVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLNDGEEEHCNGSKRDEN 1106
            +D+EDAIN    GKLRVISVS+VSR FHPNFSAKWR Y YIFPL +G  +  N       
Sbjct: 219  RDIEDAINQAALGKLRVISVSEVSRVFHPNFSAKWRHYLYIFPLTNGYRDQSN------- 271

Query: 1105 LITNQPHCEQLNGCREYIGGEKDGYLTVDDENEFESGNKPRSFSIHKVNQLLLQLEGKSL 926
              +N   C+       +    KDG          E+  K   FS+ KVN LL +LEGK L
Sbjct: 272  --SNGESCDISKYNEMHDSSSKDG---------IENQEKSYLFSVSKVNVLLRKLEGKLL 320

Query: 925  SYKMFARDTKASRSTGPPTECFIYHARATEARLP---CVEE 812
            SYKMFARDTKASR+ GPPTECF+YHARA E +LP   C EE
Sbjct: 321  SYKMFARDTKASRNDGPPTECFVYHARAMEVKLPTTDCGEE 361


>gb|AFK45334.1| unknown [Medicago truncatula]
          Length = 400

 Score =  394 bits (1012), Expect = e-107
 Identities = 198/340 (58%), Positives = 245/340 (72%), Gaps = 4/340 (1%)
 Frame = -1

Query: 1822 MENQTEKKVY-LHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSISVLF 1646
            ME+Q+E+  + +HYNHT   KYARW +RE +EFMYARPWQ V  FY N V G  S+ +LF
Sbjct: 1    MEHQSERDSHHVHYNHTHPSKYARWNARESFEFMYARPWQRVNHFYSNTVRGNLSLPLLF 60

Query: 1645 GTKKFVLD---VAEISEAREGTESVRLSAKDRTGRWARVTFKILLSYHGGSFDGWQKQPD 1475
             ++   +    V EISE + G      ++KDR+G+WAR  FKILLSYHGGSFDGWQKQP+
Sbjct: 61   QSQTLPVHDSRVPEISEFQSG------ASKDRSGKWARFNFKILLSYHGGSFDGWQKQPN 114

Query: 1474 LNTVQGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQVCAFYTWRKD 1295
            LNTVQ +VE SLG+FVDE K Q LKDK LP++GCA VAGRTDKGVTAL+QVC+FYTW+KD
Sbjct: 115  LNTVQSVVEVSLGKFVDENKTQLLKDKGLPIQGCAAVAGRTDKGVTALQQVCSFYTWKKD 174

Query: 1294 VKPQDVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLNDGEEEHCNGSKR 1115
            +KP+++EDAIN+  PGKLRV+SV +VSR FHPNFSAKWRRY YIFPL DG+++  +G   
Sbjct: 175  IKPREIEDAINDAAPGKLRVVSVYEVSRAFHPNFSAKWRRYLYIFPLTDGQDKDQSGGNG 234

Query: 1114 DENLITNQPHCEQLNGCREYIGGEKDGYLTVDDENEFESGNKPRSFSIHKVNQLLLQLEG 935
            +               C  +I  E       D ++E E  NK   F + KVN+LL +LEG
Sbjct: 235  E--------------SCDSFIYNE---ICDSDSKDELEKENKSYVFGVRKVNRLLQKLEG 277

Query: 934  KSLSYKMFARDTKASRSTGPPTECFIYHARATEARLPCVE 815
            K LSYKMFARDTKASR+ GPPTECF++HARA EA+LP  E
Sbjct: 278  KMLSYKMFARDTKASRNDGPPTECFVHHARAMEAKLPITE 317


>ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago truncatula]
            gi|355524623|gb|AET05077.1| tRNA pseudouridine synthase A
            [Medicago truncatula]
          Length = 400

 Score =  394 bits (1012), Expect = e-107
 Identities = 198/340 (58%), Positives = 245/340 (72%), Gaps = 4/340 (1%)
 Frame = -1

Query: 1822 MENQTEKKVY-LHYNHTDSCKYARWTSRECYEFMYARPWQHVLDFYLNLVNGRSSISVLF 1646
            ME+Q+E+  + +HYNHT   KYARW +RE +EFMYARPWQ V  FY N V G  S+ +LF
Sbjct: 1    MEHQSERDSHHVHYNHTHPSKYARWNARESFEFMYARPWQRVNHFYSNTVRGNFSLPLLF 60

Query: 1645 GTKKFVLD---VAEISEAREGTESVRLSAKDRTGRWARVTFKILLSYHGGSFDGWQKQPD 1475
             ++   +    V EISE + G      ++KDR+G+WAR  FKILLSYHGGSFDGWQKQP+
Sbjct: 61   QSQTLPVHDSRVPEISEFQSG------ASKDRSGKWARFNFKILLSYHGGSFDGWQKQPN 114

Query: 1474 LNTVQGLVEKSLGRFVDEKKAQKLKDKSLPLEGCAIVAGRTDKGVTALKQVCAFYTWRKD 1295
            LNTVQ +VE SLG+FVDE K Q LKDK LP++GCA VAGRTDKGVTAL+QVC+FYTW+KD
Sbjct: 115  LNTVQSVVEVSLGKFVDENKTQLLKDKGLPIQGCAAVAGRTDKGVTALQQVCSFYTWKKD 174

Query: 1294 VKPQDVEDAINNGEPGKLRVISVSKVSREFHPNFSAKWRRYFYIFPLNDGEEEHCNGSKR 1115
            +KP+++EDAIN+  PGKLRV+SV +VSR FHPNFSAKWRRY YIFPL DG+++  +G   
Sbjct: 175  IKPREIEDAINDAAPGKLRVVSVYEVSRAFHPNFSAKWRRYLYIFPLTDGQDKDQSGGNG 234

Query: 1114 DENLITNQPHCEQLNGCREYIGGEKDGYLTVDDENEFESGNKPRSFSIHKVNQLLLQLEG 935
            +               C  +I  E       D ++E E  NK   F + KVN+LL +LEG
Sbjct: 235  E--------------SCDSFIYNE---ICDSDSKDELEKENKSYVFGVRKVNRLLQKLEG 277

Query: 934  KSLSYKMFARDTKASRSTGPPTECFIYHARATEARLPCVE 815
            K LSYKMFARDTKASR+ GPPTECF++HARA EA+LP  E
Sbjct: 278  KMLSYKMFARDTKASRNDGPPTECFVHHARAMEAKLPITE 317