BLASTX nr result

ID: Akebia25_contig00020641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00020641
         (629 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596...    64   5e-08
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                61   3e-07
ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea ma...    56   8e-06

>ref|XP_006361364.1| PREDICTED: uncharacterized protein LOC102596609 [Solanum tuberosum]
          Length = 278

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = -2

Query: 601 KMSVVEM-MLRWMRGRTRKXXXXXXXXXXXXXXVLIDD*LRKS*LRWFGLVQ*RLIAAPV 425
           KM V EM MLRWM G TR                 + D LR++ LRWFG V+ R   APV
Sbjct: 165 KMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVRRRCADAPV 224

Query: 424 RR--NIRVEGPNQPRGRPGRNWTKIVKADINELKYQKTVLLTK 302
           RR   + VEG  + RGRP + W ++++ D+ +L   + + L +
Sbjct: 225 RRCEGLVVEGTRRGRGRPKKYWGEVIRQDLAQLHITEDMTLDR 267


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
 Frame = -2

Query: 604 NKMSVVEM-MLRWMRGRTRKXXXXXXXXXXXXXXVLIDD*LRKS*LRWFGLVQ*RLIAAP 428
           +KM V EM MLRWM G TR                 + D LR++ LRWFG V+ R   AP
Sbjct: 577 HKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAP 636

Query: 427 VRR--NIRVEGPNQPRGRPGRNWTKIVKADINELKYQKTVLLTK 302
           VRR   + VEG  + RGRP + W ++++ D+  L   + + L +
Sbjct: 637 VRRCEVMVVEGTRRGRGRPKKYWEEVIRQDLAMLHITEDMTLDR 680


>ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea mays]
           gi|238014750|gb|ACR38410.1| unknown [Zea mays]
          Length = 215

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
 Frame = -2

Query: 601 KMSVVEM-MLRWMRGRTRKXXXXXXXXXXXXXXVLIDD*LRKS*LRWFGLVQ*RLIAAPV 425
           ++ V EM MLRW+ G TR+                I++ L +  LRWFG +Q R   APV
Sbjct: 101 QLCVAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEEKLMQHRLRWFGHIQRRSDEAPV 160

Query: 424 RRNI--RVEGPNQPRGRPGRNWTKIVKADINELKYQKTVLLTK 302
              I  R E   + RGRP   WT+ VK D+ E K  K + + +
Sbjct: 161 HIGIIRRPENVKRGRGRPTLTWTEAVKRDLKEWKIDKELAVDR 203


Top