BLASTX nr result
ID: Akebia25_contig00020086
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia25_contig00020086 (769 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containi... 227 4e-57 emb|CBI15077.3| unnamed protein product [Vitis vinifera] 227 4e-57 ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containi... 226 5e-57 gb|EXC31176.1| hypothetical protein L484_004942 [Morus notabilis] 224 3e-56 ref|XP_004236513.1| PREDICTED: pentatricopeptide repeat-containi... 186 1e-44 ref|XP_006345185.1| PREDICTED: pentatricopeptide repeat-containi... 184 2e-44 gb|EPS59463.1| hypothetical protein M569_15345, partial [Genlise... 142 1e-31 ref|XP_007037424.1| Tetratricopeptide repeat-like superfamily pr... 126 7e-27 ref|XP_002311156.2| hypothetical protein POPTR_0008s05220g [Popu... 121 2e-25 ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containi... 120 4e-25 emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera] 120 5e-25 ref|XP_007033247.1| Mitochondrial editing factor 22 [Theobroma c... 120 7e-25 ref|NP_198573.1| pentatricopeptide repeat (PPR-like) superfamily... 119 2e-24 ref|XP_006430120.1| hypothetical protein CICLE_v10011370mg [Citr... 119 2e-24 ref|XP_003612041.1| Pentatricopeptide repeat-containing protein ... 119 2e-24 ref|XP_007027873.1| Pentatricopeptide repeat superfamily protein... 118 2e-24 ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containi... 118 2e-24 ref|XP_002870540.1| pentatricopeptide repeat-containing protein ... 118 2e-24 emb|CBI41082.3| unnamed protein product [Vitis vinifera] 118 3e-24 ref|XP_004289268.1| PREDICTED: pentatricopeptide repeat-containi... 117 3e-24 >ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520 [Vitis vinifera] Length = 663 Score = 227 bits (578), Expect = 4e-57 Identities = 123/234 (52%), Positives = 164/234 (70%), Gaps = 9/234 (3%) Frame = +2 Query: 95 ISHLKAKGIVVLPKPIKIQTPVFLSSSSTTFP--------AISIPNNPISQLSHLLKQHP 250 +S L + I L +P +Q+P+ SS+T+ + S+P++ S LLK+ P Sbjct: 9 LSLLFSTKIPRLQEPFYVQSPLVYISSNTSSAIWEPSGTSSFSLPSH--STFVQLLKKRP 66 Query: 251 NPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQI 430 + +QI QIH+Q++T + NTSL+ LI SYI N +ARI+FD FPS PP TI+WN + Sbjct: 67 SLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPP-TIIWNLM 125 Query: 431 IQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACS-HQLSPICGENIHGLI 607 IQAYSKT +SQESL+LF+QMLA RPT + DKYTFTFV TACS H GEN+HG++ Sbjct: 126 IQAYSKTPSSQESLYLFHQMLAHGRPTSA--DKYTFTFVFTACSRHPTLRGYGENVHGMV 183 Query: 608 IKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 +K G ESDIFVGNSLVN YS+F++M +A ++FD MPQRDVITWTS+++GYA G Sbjct: 184 VKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRG 237 Score = 61.6 bits (148), Expect = 3e-07 Identities = 37/148 (25%), Positives = 72/148 (48%) Frame = +2 Query: 326 ALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNR 505 ++++ Y + AR LFD P + + W ++ Y E+L F ML + Sbjct: 228 SVVKGYAMRGELVRARELFDMMPG--RNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDE 285 Query: 506 PTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMG 685 P++ +++AC+H + G+ IH I K + +L++ Y+ ++ Sbjct: 286 VK---PNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRID 342 Query: 686 EAHKIFDGMPQRDVITWTSLLRGYAKSG 769 A ++FDG+ +RD++TWTS++ G + G Sbjct: 343 CARRVFDGLHKRDLLTWTSMISGLSMHG 370 >emb|CBI15077.3| unnamed protein product [Vitis vinifera] Length = 804 Score = 227 bits (578), Expect = 4e-57 Identities = 123/234 (52%), Positives = 164/234 (70%), Gaps = 9/234 (3%) Frame = +2 Query: 95 ISHLKAKGIVVLPKPIKIQTPVFLSSSSTTFP--------AISIPNNPISQLSHLLKQHP 250 +S L + I L +P +Q+P+ SS+T+ + S+P++ S LLK+ P Sbjct: 9 LSLLFSTKIPRLQEPFYVQSPLVYISSNTSSAIWEPSGTSSFSLPSH--STFVQLLKKRP 66 Query: 251 NPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQI 430 + +QI QIH+Q++T + NTSL+ LI SYI N +ARI+FD FPS PP TI+WN + Sbjct: 67 SLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPP-TIIWNLM 125 Query: 431 IQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACS-HQLSPICGENIHGLI 607 IQAYSKT +SQESL+LF+QMLA RPT + DKYTFTFV TACS H GEN+HG++ Sbjct: 126 IQAYSKTPSSQESLYLFHQMLAHGRPTSA--DKYTFTFVFTACSRHPTLRGYGENVHGMV 183 Query: 608 IKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 +K G ESDIFVGNSLVN YS+F++M +A ++FD MPQRDVITWTS+++GYA G Sbjct: 184 VKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRG 237 Score = 99.8 bits (247), Expect = 1e-18 Identities = 61/166 (36%), Positives = 86/166 (51%) Frame = +2 Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451 IH I ++++ ALI Y AR +FD + W +I S Sbjct: 282 IHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHK--RDLLTWTSMISGLSMH 339 Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631 E L F +MLA PD T V+ CSH + E +HG+++K G ES+ Sbjct: 340 GLGAECLWTFSEMLAEGFK----PDDITLLGVLNGCSHS-GLVEEEIVHGMVVKSGFESN 394 Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 ++VGNS++N SVFA+M +A K+F+ M +RDV +WTSLL GYAK G Sbjct: 395 LYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHG 440 Score = 57.4 bits (137), Expect = 6e-06 Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 1/167 (0%) Frame = +2 Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451 +H ++ F SN + ++I AR +F+ W ++ Y+K Sbjct: 382 VHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSE--RDVFSWTSLLGGYAKH 439 Query: 452 SN-SQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628 + SL F ML +R P++ V++AC+H + G IH I KIG Sbjct: 440 GEMDRASLTFFCNMLCDDRVN---PNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQ 496 Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 + +L++ Y+ ++ A ++F+G+ +RDV+++TS++ G + G Sbjct: 497 SSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLSYHG 543 >ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Vitis vinifera] Length = 684 Score = 226 bits (577), Expect = 5e-57 Identities = 120/236 (50%), Positives = 156/236 (66%), Gaps = 7/236 (2%) Frame = +2 Query: 83 QMLVISHLKAKGIVVLPKPIKIQTPVFLSSSSTTFPAISIPNNPI-------SQLSHLLK 241 Q+ VIS + + K K T F SS TFP+ISIP NPI S LL Sbjct: 24 QIHVISKAITLNPIAVSKHFKFIT-YFSFCSSNTFPSISIPTNPIPIDLPNPQTFSLLLN 82 Query: 242 QHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILW 421 Q P S + QIH+Q++TQ SSN SL A+LI Y+ + N ARILFD +PS P LW Sbjct: 83 QRPKLSPLQQIHAQVVTQALSSNASLTASLIHCYLCAKNHPNARILFDHYPSPSPPIKLW 142 Query: 422 NQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHG 601 N +I+ YSK NSQE +HLF +ML L+ P +PD+YTFTFVIT+CSHQ+S I GE +HG Sbjct: 143 NVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISLIYGEIVHG 202 Query: 602 LIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 +++K G ES+++VGNS++N SVFA+M +A K+F+ M +RDV +WTSLL GYAK G Sbjct: 203 MVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHG 258 >gb|EXC31176.1| hypothetical protein L484_004942 [Morus notabilis] Length = 660 Score = 224 bits (571), Expect = 3e-56 Identities = 113/207 (54%), Positives = 145/207 (70%), Gaps = 7/207 (3%) Frame = +2 Query: 170 SSSTTFPAISIPNN------PISQ-LSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAA 328 SSSTT PAIS P N PI Q L LLK+ P+ + QIH++++T SS+ SL + Sbjct: 25 SSSTTSPAISRPTNKIPFDHPIPQTLFQLLKKGPSLPNLKQIHAKVVTFALSSHASLTTS 84 Query: 329 LIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRP 508 LI Y+ + ARILFD +PS P T++WN +I+AYSK NSQESLHLF QMLA+N Sbjct: 85 LINCYLCIKDLNKARILFDRYPSSLPPTLVWNLMIRAYSKLQNSQESLHLFTQMLAMNEG 144 Query: 509 TLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGE 688 ++PDKYTFTFVIT+CSHQ S CGE +HG+ +K G E D+FVGNS++N Y+ FA+ + Sbjct: 145 LKAVPDKYTFTFVITSCSHQNSMHCGEVVHGMAVKNGLELDLFVGNSVINVYAFFARWED 204 Query: 689 AHKIFDGMPQRDVITWTSLLRGYAKSG 769 A K+FDGMP+RD TWT LLRGY + G Sbjct: 205 AQKVFDGMPERDAFTWTGLLRGYTRGG 231 >ref|XP_004236513.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Solanum lycopersicum] Length = 618 Score = 186 bits (471), Expect = 1e-44 Identities = 98/230 (42%), Positives = 142/230 (61%), Gaps = 2/230 (0%) Frame = +2 Query: 86 MLVISHLKAKGIVVLPKPIKIQTPVFLSSSSTTFPAISIPNNPIS--QLSHLLKQHPNPS 259 M +S KAK + V+ +I SS+ TF A+ I+ +L LL Q P S Sbjct: 1 MRFLSWRKAKHLTVIKPKCRI-----CYSSTATFAAVFQDKIHITRKELCKLLHQRPPKS 55 Query: 260 QINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQA 439 Q+ QIH+QI+TQ SS S++ +LI Y+ AR LF P P ++WN +I+ Sbjct: 56 QLKQIHAQILTQELSSTASIVNSLIHCYLHIKEVTSARFLFLHHPLSSPPILIWNLMIRV 115 Query: 440 YSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIG 619 Y K NS ES LF Q+L L+ P +PD+YTFTF++T+C+HQ S + G+ +HGL+++ G Sbjct: 116 YCKLQNSSESFSLFRQLLNLDHPIRVLPDEYTFTFIVTSCAHQKSFVHGKIVHGLVVRNG 175 Query: 620 CESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 ES+++VGNSL+N YSVF +A+K+FD + RDV +WTSL+ GYA +G Sbjct: 176 LESNLYVGNSLINMYSVFKITDDAYKVFDRIADRDVFSWTSLICGYANNG 225 >ref|XP_006345185.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Solanum tuberosum] Length = 547 Score = 184 bits (468), Expect = 2e-44 Identities = 92/202 (45%), Positives = 132/202 (65%), Gaps = 2/202 (0%) Frame = +2 Query: 170 SSSTTFPAISIP--NNPISQLSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSY 343 SS+ TFPA+ + +LS LL Q P SQ+ QIH+QI+TQ SS SL+ +LI Y Sbjct: 13 SSTATFPAVFQDKIHTTRKELSKLLHQRPPKSQLKQIHAQILTQELSSTASLVNSLIHCY 72 Query: 344 ISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIP 523 + AR LF +P P ++WN +I+ Y K NS ES LF Q+L L+ P Sbjct: 73 LHIKEVTSARFLFLHYPLPSPPILIWNLMIRVYCKLQNSSESFCLFRQLLNLDHRIRVFP 132 Query: 524 DKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIF 703 D+YTFTF++T+C+HQ S + G+ +HGL+++ G ES+++VGNSL+N YSVF +A+K+F Sbjct: 133 DEYTFTFIVTSCAHQKSIVHGKIVHGLVVRNGLESNLYVGNSLINMYSVFKITDDAYKVF 192 Query: 704 DGMPQRDVITWTSLLRGYAKSG 769 D + +RDV +WTSL+ GYA +G Sbjct: 193 DRITERDVFSWTSLICGYANNG 214 >gb|EPS59463.1| hypothetical protein M569_15345, partial [Genlisea aurea] Length = 433 Score = 142 bits (358), Expect = 1e-31 Identities = 75/183 (40%), Positives = 112/183 (61%), Gaps = 1/183 (0%) Frame = +2 Query: 224 LSHLLKQHPNPSQINQIHSQIITQ-TFSSNTSLIAALIRSYISSNNFIYARILFDSFPSC 400 LS LL + S + QIH++II Q T SLI +LI Y+ N A+ILFDS+P Sbjct: 3 LSWLLNRRVPISAVEQIHARIIVQRTRFGGVSLIDSLIHCYLHWNRLAAAKILFDSYPLR 62 Query: 401 PPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPI 580 P +LWN +I+A++K ES+ LF M+A + D+YTF V+T+C+HQ Sbjct: 63 SPPILLWNVVIRAFAKLRYRSESIALFRGMIAAGEFVAA--DEYTFNSVLTSCAHQQDVE 120 Query: 581 CGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYA 760 G +HG+ ++ G S+++VGNSL++ Y F EAHK+FD M RD+ +WTSL+R ++ Sbjct: 121 SGRAVHGMAMRNGFSSNLYVGNSLISVYGAFGLGDEAHKVFDEMSGRDIFSWTSLIRAHS 180 Query: 761 KSG 769 ++G Sbjct: 181 QNG 183 >ref|XP_007037424.1| Tetratricopeptide repeat-like superfamily protein, putative [Theobroma cacao] gi|508774669|gb|EOY21925.1| Tetratricopeptide repeat-like superfamily protein, putative [Theobroma cacao] Length = 551 Score = 126 bits (317), Expect = 7e-27 Identities = 73/197 (37%), Positives = 122/197 (61%), Gaps = 6/197 (3%) Frame = +2 Query: 197 SIPNNPISQLS--HLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYI-SSNNFIY 367 ++ N+ I Q S LL+++ +I QIH+QII FS ++ LI YI SSNN + Sbjct: 10 NLVNSRILQQSIISLLQKYRTIKKITQIHTQIIINGFSQKNFILVNLISFYITSSNNLPH 69 Query: 368 ARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFV 547 A +F++ PST +WN++I+ YS+T N ++S+ L+ QM+A T +IPD +T++++ Sbjct: 70 ALKIFETIEK--PSTTIWNRVIRGYSRTENPEKSVELYNQMVA----TGAIPDGFTYSYL 123 Query: 548 ITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFA---KMGEAHKIFDGMPQ 718 ++AC+ GE +HG ++ G S++FV +LVN Y++ +G A ++FD M + Sbjct: 124 LSACARSGMLREGEQVHGKVLADGYCSNVFVRTNLVNLYAMVGGGDGIGYARRVFDEMGE 183 Query: 719 RDVITWTSLLRGYAKSG 769 R+V++W SLL GY + G Sbjct: 184 RNVVSWNSLLAGYIRYG 200 Score = 58.2 bits (139), Expect = 3e-06 Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 4/152 (2%) Frame = +2 Query: 326 ALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNR 505 +L+ YI + AR +FD P + + W ++ +S+ +++L F QM R Sbjct: 191 SLLAGYIRYGDVHMARRVFDEMPE--RNVVSWTTMVAGFSRNGKCRQALSFFNQM---RR 245 Query: 506 PTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD----IFVGNSLVNFYSVF 673 + + D+ ++AC+ G+ IH I + + + N+L++ Y+ Sbjct: 246 ARVQL-DQVALLAALSACAELGDLESGKWIHSHIKETSRVRSQRLLVSLNNALIHMYASC 304 Query: 674 AKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 + EA+++ MP+R ++WTS++ G AK G Sbjct: 305 GLIEEAYQVLKYMPERSTVSWTSMIMGLAKQG 336 >ref|XP_002311156.2| hypothetical protein POPTR_0008s05220g [Populus trichocarpa] gi|550332465|gb|EEE88523.2| hypothetical protein POPTR_0008s05220g [Populus trichocarpa] Length = 878 Score = 121 bits (304), Expect = 2e-25 Identities = 73/192 (38%), Positives = 110/192 (57%), Gaps = 3/192 (1%) Frame = +2 Query: 200 IPNNPISQLSH---LLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYA 370 +P N I S+ LL + + QIH ++ ++ A LI+SY+ YA Sbjct: 25 LPPNHIRNYSNYVSLLSSCKTLNSLLQIHVRLTVSGLQNDHLTNAHLIKSYLLFLKCNYA 84 Query: 371 RILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVI 550 R LFDS P+ PS +L+N II+AYS+T N QE++++++ ML PDKYTFTFV+ Sbjct: 85 RFLFDSLPN--PSVMLYNSIIRAYSRTKNHQEAINIYHCMLNKGLE----PDKYTFTFVL 138 Query: 551 TACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVI 730 AC+ L G +H II G E D F+G SLV+ Y + A K+FD MP++DV+ Sbjct: 139 KACTGALYFKEGILVHKDIIVRGLERDAFIGTSLVDMYCKMGDLKLARKVFDKMPEKDVV 198 Query: 731 TWTSLLRGYAKS 766 W++++ G ++S Sbjct: 199 AWSAMILGLSQS 210 Score = 76.3 bits (186), Expect = 1e-11 Identities = 48/166 (28%), Positives = 76/166 (45%) Frame = +2 Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451 IH +II F S + ALI Y + A LF C + WN +I Y + Sbjct: 555 IHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHR-TGCRKDEVSWNVMIAGYMHS 613 Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631 ++ ++ F QM N P+ T V+ A +H + G +H +I++G +S Sbjct: 614 GHAIDAFSAFCQMKLENIQ----PNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSK 669 Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 VGN L++ Y+ + + KIF M +D ++W +L GYA G Sbjct: 670 TPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHG 715 Score = 66.2 bits (160), Expect = 1e-08 Identities = 44/167 (26%), Positives = 76/167 (45%) Frame = +2 Query: 269 QIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSK 448 +IH Q S+ ++ ++ Y A+ LF + W+ II A+ + Sbjct: 352 EIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKG--RDLVAWSAIIAAFVQ 409 Query: 449 TSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628 + QE+L LF M +K + AC+ S G+++H +K + Sbjct: 410 SGYPQEALSLFRSMQNEGLQA----NKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDL 465 Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 DI VG +LV+ Y+ A +F+ MP +DV+TW +++ GYA+ G Sbjct: 466 DISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIG 512 Score = 56.6 bits (135), Expect = 9e-06 Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 3/169 (1%) Frame = +2 Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451 +H + + S+ AL+ Y F A LF+ P + WN +I Y++ Sbjct: 454 MHCCAVKANVDLDISVGTALVSMYAKCGFFALALTLFNRMPC--KDVVTWNAMINGYAQI 511 Query: 452 SNSQESLHLFY--QMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCE 625 +L +F+ Q+ LN P+ T ++ A + G IHG IIK G E Sbjct: 512 GEPFPALEMFHKLQLSELN------PNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFE 565 Query: 626 SDIFVGNSLVNFYSVFAKMGEAHKIFDGMP-QRDVITWTSLLRGYAKSG 769 S+ V +L++ Y+ + A +F ++D ++W ++ GY SG Sbjct: 566 SECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSG 614 >ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like [Vitis vinifera] Length = 1005 Score = 120 bits (302), Expect = 4e-25 Identities = 74/206 (35%), Positives = 119/206 (57%), Gaps = 5/206 (2%) Frame = +2 Query: 164 LSSSSTTFPAISIPNNPISQLSHLLK-----QHPNPSQINQIHSQIITQTFSSNTSLIAA 328 ++++++ FP++S ++ + H + +H NP + QIH+QII F + S I Sbjct: 14 IATAASEFPSLS--SSTYTNYLHYPRLLSSCKHLNP--LLQIHAQIIVSGFKHHHS-ITH 68 Query: 329 LIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRP 508 LI Y + AR +FDS P+ PS ILWN +I+AY+++ E+L ++Y M+ Sbjct: 69 LINLYSLFHKCDLARSVFDSTPN--PSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126 Query: 509 TLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGE 688 PDKYTFTFV+ AC+ L+ G HG I + G E D+F+G LV+ YS + Sbjct: 127 ----PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKR 182 Query: 689 AHKIFDGMPQRDVITWTSLLRGYAKS 766 A ++FD MP+RDV+ W +++ G ++S Sbjct: 183 AREVFDKMPKRDVVAWNAMIAGLSQS 208 Score = 82.4 bits (202), Expect = 2e-13 Identities = 50/166 (30%), Positives = 84/166 (50%) Frame = +2 Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451 IH I+ F S+ + ALI Y + A LF+ + WN II AY + Sbjct: 553 IHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNK-TDFTKDEVTWNVIIAAYMQN 611 Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631 +++E++ F+QM N P+ TF V+ A ++ + G H II++G S+ Sbjct: 612 GHAKEAISSFHQMRLENFH----PNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSN 667 Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 VGNSL++ Y+ ++ + K+F+ M +D ++W ++L GYA G Sbjct: 668 TLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHG 713 Score = 71.6 bits (174), Expect = 3e-10 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 1/167 (0%) Frame = +2 Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451 IH + S+ S AL+ Y F A F+ S + WN +I Y++ Sbjct: 452 IHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSS--RDIVTWNSLINGYAQI 509 Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631 + ++ +FY++ R + PD T V+ AC+ G IHGLI+K+G ESD Sbjct: 510 GDPYNAIDMFYKL----RLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESD 565 Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMP-QRDVITWTSLLRGYAKSG 769 V N+L++ Y+ + A +F+ +D +TW ++ Y ++G Sbjct: 566 CHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNG 612 Score = 70.1 bits (170), Expect = 8e-10 Identities = 46/167 (27%), Positives = 76/167 (45%) Frame = +2 Query: 269 QIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSK 448 +IH + Q S+ + L+ Y A+ LF + W+ II A + Sbjct: 350 EIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG--RDLVAWSAIIAALVQ 407 Query: 449 TSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628 T +E+L LF +M P++ T ++ AC+ G++IH +K +S Sbjct: 408 TGYPEEALSLFQEMQNQKMK----PNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDS 463 Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 D+ G +LV+ Y+ A F+ M RD++TW SL+ GYA+ G Sbjct: 464 DLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIG 510 >emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera] Length = 1005 Score = 120 bits (301), Expect = 5e-25 Identities = 70/175 (40%), Positives = 103/175 (58%) Frame = +2 Query: 242 QHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILW 421 +H NP + QIH+QII F + S I LI Y + AR +FDS P+ PS ILW Sbjct: 43 KHLNP--LLQIHAQIIVSGFKHHHS-ITHLINLYSLFHKCDLARSVFDSTPN--PSRILW 97 Query: 422 NQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHG 601 N +I+AY+++ E+L ++Y M+ PDKYTFTFV+ AC+ L+ G HG Sbjct: 98 NSMIRAYTRSKQYNEALEMYYCMVEKGLE----PDKYTFTFVLKACTGALNLQEGVWFHG 153 Query: 602 LIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKS 766 I + G E D+F+G LV+ YS + A ++FD MP+RDV+ W +++ G ++S Sbjct: 154 EIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQS 208 Score = 82.4 bits (202), Expect = 2e-13 Identities = 50/166 (30%), Positives = 84/166 (50%) Frame = +2 Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451 IH I+ F S+ + ALI Y + A LF+ + WN II AY + Sbjct: 553 IHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNK-TDFTKDEVTWNVIIAAYMQN 611 Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631 +++E++ F+QM N P+ TF V+ A ++ + G H II++G S+ Sbjct: 612 GHAKEAISSFHQMRLENFH----PNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSN 667 Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 VGNSL++ Y+ ++ + K+F+ M +D ++W ++L GYA G Sbjct: 668 TLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHG 713 Score = 71.6 bits (174), Expect = 3e-10 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 1/167 (0%) Frame = +2 Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451 IH + S+ S AL+ Y F A F+ S + WN +I Y++ Sbjct: 452 IHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSS--RDIVTWNSLINGYAQI 509 Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631 + ++ +FY++ R + PD T V+ AC+ G IHGLI+K+G ESD Sbjct: 510 GDPYNAIDMFYKL----RLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESD 565 Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMP-QRDVITWTSLLRGYAKSG 769 V N+L++ Y+ + A +F+ +D +TW ++ Y ++G Sbjct: 566 CHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNG 612 Score = 70.1 bits (170), Expect = 8e-10 Identities = 46/167 (27%), Positives = 76/167 (45%) Frame = +2 Query: 269 QIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSK 448 +IH + Q S+ + L+ Y A+ LF + W+ II A + Sbjct: 350 EIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG--RDLVAWSAIIAALVQ 407 Query: 449 TSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628 T +E+L LF +M P++ T ++ AC+ G++IH +K +S Sbjct: 408 TGYPEEALSLFQEMQNQKMK----PNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDS 463 Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 D+ G +LV+ Y+ A F+ M RD++TW SL+ GYA+ G Sbjct: 464 DLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIG 510 >ref|XP_007033247.1| Mitochondrial editing factor 22 [Theobroma cacao] gi|508712276|gb|EOY04173.1| Mitochondrial editing factor 22 [Theobroma cacao] Length = 735 Score = 120 bits (300), Expect = 7e-25 Identities = 68/211 (32%), Positives = 106/211 (50%) Frame = +2 Query: 137 PIKIQTPVFLSSSSTTFPAISIPNNPISQLSHLLKQHPNPSQINQIHSQIITQTFSSNTS 316 P P +ST F + S ++LL + + QIH++++ N Sbjct: 42 PFNFLKPFSSHDNSTIFHTFNFD----SFYANLLDSSTRNAHLTQIHAKLVLLDIHQNGF 97 Query: 317 LIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLA 496 LI LI S ++ YAR +FD FP P LWN I++ YSK + ++ ++ +M Sbjct: 98 LITKLINSAVNLGEISYARKVFDEFPD--PDVFLWNAIVRGYSKCNMFANAIEMYSRMQV 155 Query: 497 LNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFA 676 L PD YT V+ AC G +HG I ++G E D+FV N +V FY+ Sbjct: 156 L----WVSPDGYTLPHVLKACGGLPGFEMGRRVHGQIFRLGFEKDVFVQNGIVAFYAKCG 211 Query: 677 KMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 K+ A +FDG+ R+V++WTS++ GYA++G Sbjct: 212 KIESAKVVFDGLELRNVVSWTSMISGYAQNG 242 Score = 75.1 bits (183), Expect = 3e-11 Identities = 46/166 (27%), Positives = 77/166 (46%) Frame = +2 Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451 IH +I L+ AL Y + AR FD P+ ILWN +I Y+K Sbjct: 285 IHGCVIKMGLELEPDLLIALTAMYAKCGQVMVARSFFDQMKV--PNLILWNAMISGYAKN 342 Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631 ++E++ LF +M++ N T D T + AC+ S + I K D Sbjct: 343 GYAEEAVELFRKMISNNIRT----DSITARCAVVACAQVGSLGLARWMDNYISKSEHRDD 398 Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 IFV ++L++ ++ + A +FD ++DV+ W++++ GY G Sbjct: 399 IFVNSALIDMFAKCGNVDMARMVFDRTLEKDVVVWSAMIVGYGLHG 444 Score = 65.9 bits (159), Expect = 2e-08 Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 6/188 (3%) Frame = +2 Query: 224 LSHLLKQH---PNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFP 394 L H+LK P ++H QI F + + ++ Y A+++FD Sbjct: 165 LPHVLKACGGLPGFEMGRRVHGQIFRLGFEKDVFVQNGIVAFYAKCGKIESAKVVFDGLE 224 Query: 395 SCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLS 574 + + W +I Y++ E+L +F +M + +PD F I A + Sbjct: 225 L--RNVVSWTSMISGYAQNGQPIEALRVFDEMRKMG----VMPDWVAFVSAIRAHTDVED 278 Query: 575 PICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGE---AHKIFDGMPQRDVITWTSL 745 G++IHG +IK+G E + + L+ +++AK G+ A FD M ++I W ++ Sbjct: 279 LEHGKSIHGCVIKMGLELE---PDLLIALTAMYAKCGQVMVARSFFDQMKVPNLILWNAM 335 Query: 746 LRGYAKSG 769 + GYAK+G Sbjct: 336 ISGYAKNG 343 >ref|NP_198573.1| pentatricopeptide repeat (PPR-like) superfamily protein [Arabidopsis thaliana] gi|75170664|sp|Q9FHR3.1|PP403_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At5g37570 gi|9757967|dbj|BAB08303.1| unnamed protein product [Arabidopsis thaliana] gi|332006824|gb|AED94207.1| CCCH-type zinc finger protein SOMNUS [Arabidopsis thaliana] Length = 550 Score = 119 bits (297), Expect = 2e-24 Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 1/183 (0%) Frame = +2 Query: 224 LSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFI-YARILFDSFPSC 400 L L K + +NQIH++II + + +LI+ I S SS++ + Y+ +F+ PS Sbjct: 13 LETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPS- 71 Query: 401 PPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPI 580 P T LWN +I+ YS E++ + +M+ R L+ PD+YTF V+ CS+ Sbjct: 72 -PGTYLWNHLIKGYSNKFLFFETVSILMRMM---RTGLARPDEYTFPLVMKVCSNNGQVR 127 Query: 581 CGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYA 760 G ++HGL+++IG + D+ VG S V+FY + A K+F MP+R+ ++WT+L+ Y Sbjct: 128 VGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYV 187 Query: 761 KSG 769 KSG Sbjct: 188 KSG 190 >ref|XP_006430120.1| hypothetical protein CICLE_v10011370mg [Citrus clementina] gi|557532177|gb|ESR43360.1| hypothetical protein CICLE_v10011370mg [Citrus clementina] Length = 574 Score = 119 bits (297), Expect = 2e-24 Identities = 75/223 (33%), Positives = 122/223 (54%), Gaps = 9/223 (4%) Frame = +2 Query: 128 LPKPIKIQTPVFLSSSSTTFPAISI--------PNNPISQLSHLLKQHPNPSQINQIHSQ 283 +PK + TP S S+ P S P+ +S L+ L+K+ + ++Q+HS Sbjct: 1 MPKIDEPNTPCKHKSCSSMLPNCSRSAPINFPKPSCLLSALT-LIKKCKLQTHLHQVHSH 59 Query: 284 IITQTFSSNTSLIAALIRSYIS-SNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNS 460 II + + SL+A I S + Y+ +F+ + P+T LWN +++ YS+ S Sbjct: 60 IIKKGLDQDHSLVAHFISLCHSLATPLSYSSAVFNRIVN--PNTFLWNTLLKGYSQNSRF 117 Query: 461 QESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFV 640 E +F +++ ++PDKYTF VI ACSH LS G IH +I+ G + D+FV Sbjct: 118 IEVFTIFVRLIREE----AVPDKYTFPLVIKACSHVLSVREGTAIHAAVIRWGVDEDVFV 173 Query: 641 GNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 G SL++ Y ++ A K+FD MP+R+V++WT+++ GYA G Sbjct: 174 GTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVG 216 >ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 518 Score = 119 bits (297), Expect = 2e-24 Identities = 63/187 (33%), Positives = 111/187 (59%), Gaps = 2/187 (1%) Frame = +2 Query: 215 ISQLSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISS--NNFIYARILFDS 388 + Q LL++ N ++ QIH Q++ + + ++ L+ +Y S +N YAR++FD Sbjct: 11 VEQTMSLLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDR 70 Query: 389 FPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQ 568 S P+T++WN +I+AYS +++ +E+L L++QML + P + YTF F++ ACS Sbjct: 71 ISS--PNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPH----NAYTFPFLLKACSAL 124 Query: 569 LSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLL 748 + IH IIK G S+++ NSL+ Y++ + AH +FD +P RD+++W +++ Sbjct: 125 SALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMI 184 Query: 749 RGYAKSG 769 GY K G Sbjct: 185 DGYIKCG 191 Score = 69.3 bits (168), Expect = 1e-09 Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 27/198 (13%) Frame = +2 Query: 257 SQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQ 436 ++ +QIH QII + F S +L+R Y S + A +LFD PS + WN +I Sbjct: 128 AETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPS--RDIVSWNTMID 185 Query: 437 AYSKTSNSQESLHLFYQM-----------------LALNRPTLSI----------PDKYT 535 Y K N + + +F M +++ L + PDK T Sbjct: 186 GYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKIT 245 Query: 536 FTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMP 715 + ++AC+ + G+ IH I K + D +G +L++ Y +M +A +F + Sbjct: 246 LSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLE 305 Query: 716 QRDVITWTSLLRGYAKSG 769 ++ V TWT+++ G+A G Sbjct: 306 KKCVYTWTAIIGGFAVHG 323 >ref|XP_007027873.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao] gi|508716478|gb|EOY08375.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao] Length = 598 Score = 118 bits (296), Expect = 2e-24 Identities = 68/199 (34%), Positives = 112/199 (56%), Gaps = 4/199 (2%) Frame = +2 Query: 185 FPAISIPN----NPISQLSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISS 352 FP + +P+ N + L LL+ +Q++QIH+ II + + LI + S Sbjct: 47 FPLMPVPHPHLLNTLPSLPTLLRSCKTQNQLHQIHAHIIKKGLQQDHILITLFLSL---S 103 Query: 353 NNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKY 532 + Y+ +F+ PST +WN +++ YS+ S+ ++L LF +M + +PDKY Sbjct: 104 TSLSYSTSVFNYL--FHPSTCVWNSLLKGYSRNSSFLQTLSLFIRM----KRDGGLPDKY 157 Query: 533 TFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGM 712 T++ VI ACS Q G+ +HGL +K G + D+FVG SLV+FY ++ A K+FD M Sbjct: 158 TYSLVIKACSSQFKAWEGKMLHGLALKGGGKEDVFVGTSLVDFYGKIMEIFNARKVFDEM 217 Query: 713 PQRDVITWTSLLRGYAKSG 769 +R+V++WT+L+ G G Sbjct: 218 SERNVVSWTALVAGCINVG 236 >ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520 [Vitis vinifera] Length = 640 Score = 118 bits (296), Expect = 2e-24 Identities = 73/214 (34%), Positives = 111/214 (51%), Gaps = 35/214 (16%) Frame = +2 Query: 233 LLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYI---SSNNFIYARILFDSFPSCP 403 LL+ +QI QIH+ II + N ++A L+R S+N+ +YAR +FD PS Sbjct: 9 LLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPS-- 66 Query: 404 PSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIP-DKYTFTFVITACSHQLSPI 580 P T +WN +I+AY + N QES+ LF+QM R IP D Y+ + VI AC P Sbjct: 67 PDTFIWNTMIRAYLNSQNPQESMSLFFQM----RHQECIPIDSYSLSLVIQACGRLKDPG 122 Query: 581 CGENIHGLIIKIGCESDIFVGNSLVNFYSVF----------------------------A 676 G+ +H ++KIG SD+FV +L+ Y+ F Sbjct: 123 NGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYV 182 Query: 677 KMGE---AHKIFDGMPQRDVITWTSLLRGYAKSG 769 ++GE AH +FD MP+RD+++W +++ G+A G Sbjct: 183 RVGEINLAHDLFDRMPERDLVSWNTMIHGHASLG 216 Score = 84.3 bits (207), Expect = 4e-14 Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 8/203 (3%) Frame = +2 Query: 185 FPAISIPNNPISQLSH--------LLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRS 340 F I I N + +++H LL ++ +IN H + + + +I Sbjct: 153 FGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHD-LFDRMPERDLVSWNTMIHG 211 Query: 341 YISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSI 520 + S + A+ LFD +C I W+ +I AY+K S E+L LF++M N + Sbjct: 212 HASLGDVGTAKKLFDR--TCERDLISWSSMIAAYAKARQSNEALRLFHEMQLAN----VL 265 Query: 521 PDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKI 700 PDK T V++AC + G+ IH I + E D+ +G SLV+ Y+ + + ++ Sbjct: 266 PDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRV 325 Query: 701 FDGMPQRDVITWTSLLRGYAKSG 769 F+GM RDV W++++ G A G Sbjct: 326 FNGMNNRDVFAWSAMIMGLANHG 348 >ref|XP_002870540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297316376|gb|EFH46799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 547 Score = 118 bits (296), Expect = 2e-24 Identities = 65/182 (35%), Positives = 104/182 (57%) Frame = +2 Query: 224 LSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCP 403 L LLK + +NQIH++II + + +LI+ I S SS++ Y+ +F+ P Sbjct: 13 LETLLKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISS--SSSSLSYSSSVFERVPY-- 68 Query: 404 PSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPIC 583 P T LWN +I+ YS E++ L +M+ R + PD+YTF V+ CS+ Sbjct: 69 PGTYLWNHLIKGYSNKFLFFETVSLLMRMM---RTGFARPDEYTFPLVMKVCSNNAEFRV 125 Query: 584 GENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAK 763 G +HGL+++IG + D+ +G S V+FY + A K+F MP+R+V++WT+L+ Y K Sbjct: 126 GSTVHGLVLRIGFDKDVVLGTSFVDFYGKCKDLCSARKVFGEMPERNVVSWTALIVAYVK 185 Query: 764 SG 769 SG Sbjct: 186 SG 187 >emb|CBI41082.3| unnamed protein product [Vitis vinifera] Length = 413 Score = 118 bits (295), Expect = 3e-24 Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 7/186 (3%) Frame = +2 Query: 233 LLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYI---SSNNFIYARILFDSFPSCP 403 LL+ +QI QIH+ II + N ++A L+R S+N+ +YAR +FD PS Sbjct: 3 LLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPS-- 60 Query: 404 PSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIP-DKYTFTFVITACSHQLSPI 580 P T +WN +I+AY + N QES+ LF+QM R IP D Y+ + VI AC P Sbjct: 61 PDTFIWNTMIRAYLNSQNPQESMSLFFQM----RHQECIPIDSYSLSLVIQACGRLKDPG 116 Query: 581 CGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQ---RDVITWTSLLR 751 G+ +H ++KIG SD+FV +L+ Y+ F + A I D M RD+++W +++ Sbjct: 117 NGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLRDLVSWNTMIH 176 Query: 752 GYAKSG 769 G+A G Sbjct: 177 GHASLG 182 Score = 60.1 bits (144), Expect(2) = 4e-08 Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 1/147 (0%) Frame = +2 Query: 251 NPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTIL-WNQ 427 +P ++H+Q++ S+ + ALI Y + AR + D ++ WN Sbjct: 114 DPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLRDLVSWNT 173 Query: 428 IIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLI 607 +I ++ +S E+L LF++M N +PDK T V++AC + G+ IH I Sbjct: 174 MIHGHASLGDSNEALRLFHEMQLAN----VLPDKVTMVSVLSACGDVGALGMGKMIHECI 229 Query: 608 IKIGCESDIFVGNSLVNFYSVFAKMGE 688 + E D+ +G SLV+ Y AK G+ Sbjct: 230 ERNRIEIDLKLGTSLVDMY---AKCGD 253 Score = 24.3 bits (51), Expect(2) = 4e-08 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +3 Query: 114 KALLSFQNPSKFKLLSFSPRHQPLFP 191 +A L+ QNP + L F RHQ P Sbjct: 71 RAYLNSQNPQESMSLFFQMRHQECIP 96 >ref|XP_004289268.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39530-like [Fragaria vesca subsp. vesca] Length = 794 Score = 117 bits (294), Expect = 3e-24 Identities = 60/167 (35%), Positives = 97/167 (58%) Frame = +2 Query: 269 QIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSK 448 +IH+QI+T F + L L+ SY S +YAR +FD+ P S++ W+ ++ Y+K Sbjct: 68 RIHAQILTSGFRQDVFLANLLLDSYKKSGYIVYARNVFDTMPD--RSSVTWSSMVSMYTK 125 Query: 449 TSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628 S+E+L +F + +R + P++YTF VI AC+ G +H ++K G + Sbjct: 126 HGKSEEALKVFSEF---HRSSDGRPNEYTFPSVIRACTQFGGVDQGSQVHCFVVKTGFDK 182 Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 ++FVG SL++FY + EA IFDG+ + +TWT ++ GYAKSG Sbjct: 183 EVFVGTSLIDFYVKMGDIEEARLIFDGLEVKSAVTWTIVIAGYAKSG 229 Score = 99.4 bits (246), Expect = 1e-18 Identities = 54/169 (31%), Positives = 93/169 (55%) Frame = +2 Query: 260 QINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQA 439 Q +Q+H ++ F + +LI Y+ + AR++FD S + W +I Sbjct: 167 QGSQVHCFVVKTGFDKEVFVGTSLIDFYVKMGDIEEARLIFDGLEV--KSAVTWTIVIAG 224 Query: 440 YSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIG 619 Y+K+ S+ +L LFYQM R T +PDKY + ++TACS G+ IH +++ G Sbjct: 225 YAKSGKSEAALKLFYQM----RDT-DVPDKYVLSALLTACSALKFIGGGKQIHAYVLRRG 279 Query: 620 CESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKS 766 E D+ V N L++FY+ ++ K+FD + RD+I+WT+++ GY ++ Sbjct: 280 TEMDVSVVNVLIDFYTKCGQVLAGQKLFDKVVDRDLISWTTMIAGYMQN 328 Score = 90.1 bits (222), Expect = 8e-16 Identities = 52/149 (34%), Positives = 82/149 (55%) Frame = +2 Query: 323 AALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALN 502 +ALI Y + A+++F+ ++WN + Y++ S+E+L L Y L L+ Sbjct: 490 SALIDVYSKCSCTREAKLVFEEMNE--KDIVVWNAMFSGYAQQQESEEALKL-YSKLQLS 546 Query: 503 RPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKM 682 R IP+++TF V++A S S G+ H IIK+G E+D FV N+LV+ YS + Sbjct: 547 R---QIPNEFTFASVVSAASSLASVQHGQQFHSQIIKVGLENDPFVTNALVDMYSKCGSI 603 Query: 683 GEAHKIFDGMPQRDVITWTSLLRGYAKSG 769 EAHK+FD +DV W +++ YA G Sbjct: 604 EEAHKLFDSKTLKDVACWNTIISTYAHHG 632 Score = 70.5 bits (171), Expect = 6e-10 Identities = 40/165 (24%), Positives = 79/165 (47%) Frame = +2 Query: 269 QIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSK 448 QIH+ ++ + + S++ LI Y + + LFD I W +I Y + Sbjct: 270 QIHAYVLRRGTEMDVSVVNVLIDFYTKCGQVLAGQKLFDKVVD--RDLISWTTMIAGYMQ 327 Query: 449 TSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628 S E++ LF +M L PD Y + ++T+C + G +H I++ Sbjct: 328 NSMHVEAVKLFSEMTRLGWR----PDGYGCSSILTSCGSLEALKHGREVHAYTIRVDLVY 383 Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAK 763 + +V NSL++ Y+ + +A +FD M +V+++ +++ GY++ Sbjct: 384 EYYVKNSLIDMYAKCDSLTDARTVFDSMTDHNVVSYNAMIEGYSR 428 Score = 70.1 bits (170), Expect = 8e-10 Identities = 42/146 (28%), Positives = 74/146 (50%) Frame = +2 Query: 326 ALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNR 505 +LI Y ++ AR +FDS + + +N +I+ YS+ E+L LF M R Sbjct: 390 SLIDMYAKCDSLTDARTVFDSMTD--HNVVSYNAMIEGYSRQDKLAEALDLFNLM----R 443 Query: 506 PTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMG 685 P TF ++ + L+ + +HG+ K G DIF G++L++ YS + Sbjct: 444 LRSVQPSILTFVSLLGVSAASLTLELSKQVHGMTTKYGLCLDIFAGSALIDVYSKCSCTR 503 Query: 686 EAHKIFDGMPQRDVITWTSLLRGYAK 763 EA +F+ M ++D++ W ++ GYA+ Sbjct: 504 EAKLVFEEMNEKDIVVWNAMFSGYAQ 529