BLASTX nr result
ID: Akebia25_contig00020086
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00020086
(769 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containi... 227 4e-57
emb|CBI15077.3| unnamed protein product [Vitis vinifera] 227 4e-57
ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containi... 226 5e-57
gb|EXC31176.1| hypothetical protein L484_004942 [Morus notabilis] 224 3e-56
ref|XP_004236513.1| PREDICTED: pentatricopeptide repeat-containi... 186 1e-44
ref|XP_006345185.1| PREDICTED: pentatricopeptide repeat-containi... 184 2e-44
gb|EPS59463.1| hypothetical protein M569_15345, partial [Genlise... 142 1e-31
ref|XP_007037424.1| Tetratricopeptide repeat-like superfamily pr... 126 7e-27
ref|XP_002311156.2| hypothetical protein POPTR_0008s05220g [Popu... 121 2e-25
ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containi... 120 4e-25
emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera] 120 5e-25
ref|XP_007033247.1| Mitochondrial editing factor 22 [Theobroma c... 120 7e-25
ref|NP_198573.1| pentatricopeptide repeat (PPR-like) superfamily... 119 2e-24
ref|XP_006430120.1| hypothetical protein CICLE_v10011370mg [Citr... 119 2e-24
ref|XP_003612041.1| Pentatricopeptide repeat-containing protein ... 119 2e-24
ref|XP_007027873.1| Pentatricopeptide repeat superfamily protein... 118 2e-24
ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containi... 118 2e-24
ref|XP_002870540.1| pentatricopeptide repeat-containing protein ... 118 2e-24
emb|CBI41082.3| unnamed protein product [Vitis vinifera] 118 3e-24
ref|XP_004289268.1| PREDICTED: pentatricopeptide repeat-containi... 117 3e-24
>ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 227 bits (578), Expect = 4e-57
Identities = 123/234 (52%), Positives = 164/234 (70%), Gaps = 9/234 (3%)
Frame = +2
Query: 95 ISHLKAKGIVVLPKPIKIQTPVFLSSSSTTFP--------AISIPNNPISQLSHLLKQHP 250
+S L + I L +P +Q+P+ SS+T+ + S+P++ S LLK+ P
Sbjct: 9 LSLLFSTKIPRLQEPFYVQSPLVYISSNTSSAIWEPSGTSSFSLPSH--STFVQLLKKRP 66
Query: 251 NPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQI 430
+ +QI QIH+Q++T + NTSL+ LI SYI N +ARI+FD FPS PP TI+WN +
Sbjct: 67 SLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPP-TIIWNLM 125
Query: 431 IQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACS-HQLSPICGENIHGLI 607
IQAYSKT +SQESL+LF+QMLA RPT + DKYTFTFV TACS H GEN+HG++
Sbjct: 126 IQAYSKTPSSQESLYLFHQMLAHGRPTSA--DKYTFTFVFTACSRHPTLRGYGENVHGMV 183
Query: 608 IKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
+K G ESDIFVGNSLVN YS+F++M +A ++FD MPQRDVITWTS+++GYA G
Sbjct: 184 VKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRG 237
Score = 61.6 bits (148), Expect = 3e-07
Identities = 37/148 (25%), Positives = 72/148 (48%)
Frame = +2
Query: 326 ALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNR 505
++++ Y + AR LFD P + + W ++ Y E+L F ML +
Sbjct: 228 SVVKGYAMRGELVRARELFDMMPG--RNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDE 285
Query: 506 PTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMG 685
P++ +++AC+H + G+ IH I K + +L++ Y+ ++
Sbjct: 286 VK---PNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRID 342
Query: 686 EAHKIFDGMPQRDVITWTSLLRGYAKSG 769
A ++FDG+ +RD++TWTS++ G + G
Sbjct: 343 CARRVFDGLHKRDLLTWTSMISGLSMHG 370
>emb|CBI15077.3| unnamed protein product [Vitis vinifera]
Length = 804
Score = 227 bits (578), Expect = 4e-57
Identities = 123/234 (52%), Positives = 164/234 (70%), Gaps = 9/234 (3%)
Frame = +2
Query: 95 ISHLKAKGIVVLPKPIKIQTPVFLSSSSTTFP--------AISIPNNPISQLSHLLKQHP 250
+S L + I L +P +Q+P+ SS+T+ + S+P++ S LLK+ P
Sbjct: 9 LSLLFSTKIPRLQEPFYVQSPLVYISSNTSSAIWEPSGTSSFSLPSH--STFVQLLKKRP 66
Query: 251 NPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQI 430
+ +QI QIH+Q++T + NTSL+ LI SYI N +ARI+FD FPS PP TI+WN +
Sbjct: 67 SLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPP-TIIWNLM 125
Query: 431 IQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACS-HQLSPICGENIHGLI 607
IQAYSKT +SQESL+LF+QMLA RPT + DKYTFTFV TACS H GEN+HG++
Sbjct: 126 IQAYSKTPSSQESLYLFHQMLAHGRPTSA--DKYTFTFVFTACSRHPTLRGYGENVHGMV 183
Query: 608 IKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
+K G ESDIFVGNSLVN YS+F++M +A ++FD MPQRDVITWTS+++GYA G
Sbjct: 184 VKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRG 237
Score = 99.8 bits (247), Expect = 1e-18
Identities = 61/166 (36%), Positives = 86/166 (51%)
Frame = +2
Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
IH I ++++ ALI Y AR +FD + W +I S
Sbjct: 282 IHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHK--RDLLTWTSMISGLSMH 339
Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631
E L F +MLA PD T V+ CSH + E +HG+++K G ES+
Sbjct: 340 GLGAECLWTFSEMLAEGFK----PDDITLLGVLNGCSHS-GLVEEEIVHGMVVKSGFESN 394
Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
++VGNS++N SVFA+M +A K+F+ M +RDV +WTSLL GYAK G
Sbjct: 395 LYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHG 440
Score = 57.4 bits (137), Expect = 6e-06
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
Frame = +2
Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
+H ++ F SN + ++I AR +F+ W ++ Y+K
Sbjct: 382 VHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSE--RDVFSWTSLLGGYAKH 439
Query: 452 SN-SQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628
+ SL F ML +R P++ V++AC+H + G IH I KIG
Sbjct: 440 GEMDRASLTFFCNMLCDDRVN---PNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQ 496
Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
+ +L++ Y+ ++ A ++F+G+ +RDV+++TS++ G + G
Sbjct: 497 SSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLSYHG 543
>ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 226 bits (577), Expect = 5e-57
Identities = 120/236 (50%), Positives = 156/236 (66%), Gaps = 7/236 (2%)
Frame = +2
Query: 83 QMLVISHLKAKGIVVLPKPIKIQTPVFLSSSSTTFPAISIPNNPI-------SQLSHLLK 241
Q+ VIS + + K K T F SS TFP+ISIP NPI S LL
Sbjct: 24 QIHVISKAITLNPIAVSKHFKFIT-YFSFCSSNTFPSISIPTNPIPIDLPNPQTFSLLLN 82
Query: 242 QHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILW 421
Q P S + QIH+Q++TQ SSN SL A+LI Y+ + N ARILFD +PS P LW
Sbjct: 83 QRPKLSPLQQIHAQVVTQALSSNASLTASLIHCYLCAKNHPNARILFDHYPSPSPPIKLW 142
Query: 422 NQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHG 601
N +I+ YSK NSQE +HLF +ML L+ P +PD+YTFTFVIT+CSHQ+S I GE +HG
Sbjct: 143 NVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISLIYGEIVHG 202
Query: 602 LIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
+++K G ES+++VGNS++N SVFA+M +A K+F+ M +RDV +WTSLL GYAK G
Sbjct: 203 MVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHG 258
>gb|EXC31176.1| hypothetical protein L484_004942 [Morus notabilis]
Length = 660
Score = 224 bits (571), Expect = 3e-56
Identities = 113/207 (54%), Positives = 145/207 (70%), Gaps = 7/207 (3%)
Frame = +2
Query: 170 SSSTTFPAISIPNN------PISQ-LSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAA 328
SSSTT PAIS P N PI Q L LLK+ P+ + QIH++++T SS+ SL +
Sbjct: 25 SSSTTSPAISRPTNKIPFDHPIPQTLFQLLKKGPSLPNLKQIHAKVVTFALSSHASLTTS 84
Query: 329 LIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRP 508
LI Y+ + ARILFD +PS P T++WN +I+AYSK NSQESLHLF QMLA+N
Sbjct: 85 LINCYLCIKDLNKARILFDRYPSSLPPTLVWNLMIRAYSKLQNSQESLHLFTQMLAMNEG 144
Query: 509 TLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGE 688
++PDKYTFTFVIT+CSHQ S CGE +HG+ +K G E D+FVGNS++N Y+ FA+ +
Sbjct: 145 LKAVPDKYTFTFVITSCSHQNSMHCGEVVHGMAVKNGLELDLFVGNSVINVYAFFARWED 204
Query: 689 AHKIFDGMPQRDVITWTSLLRGYAKSG 769
A K+FDGMP+RD TWT LLRGY + G
Sbjct: 205 AQKVFDGMPERDAFTWTGLLRGYTRGG 231
>ref|XP_004236513.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum lycopersicum]
Length = 618
Score = 186 bits (471), Expect = 1e-44
Identities = 98/230 (42%), Positives = 142/230 (61%), Gaps = 2/230 (0%)
Frame = +2
Query: 86 MLVISHLKAKGIVVLPKPIKIQTPVFLSSSSTTFPAISIPNNPIS--QLSHLLKQHPNPS 259
M +S KAK + V+ +I SS+ TF A+ I+ +L LL Q P S
Sbjct: 1 MRFLSWRKAKHLTVIKPKCRI-----CYSSTATFAAVFQDKIHITRKELCKLLHQRPPKS 55
Query: 260 QINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQA 439
Q+ QIH+QI+TQ SS S++ +LI Y+ AR LF P P ++WN +I+
Sbjct: 56 QLKQIHAQILTQELSSTASIVNSLIHCYLHIKEVTSARFLFLHHPLSSPPILIWNLMIRV 115
Query: 440 YSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIG 619
Y K NS ES LF Q+L L+ P +PD+YTFTF++T+C+HQ S + G+ +HGL+++ G
Sbjct: 116 YCKLQNSSESFSLFRQLLNLDHPIRVLPDEYTFTFIVTSCAHQKSFVHGKIVHGLVVRNG 175
Query: 620 CESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
ES+++VGNSL+N YSVF +A+K+FD + RDV +WTSL+ GYA +G
Sbjct: 176 LESNLYVGNSLINMYSVFKITDDAYKVFDRIADRDVFSWTSLICGYANNG 225
>ref|XP_006345185.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum tuberosum]
Length = 547
Score = 184 bits (468), Expect = 2e-44
Identities = 92/202 (45%), Positives = 132/202 (65%), Gaps = 2/202 (0%)
Frame = +2
Query: 170 SSSTTFPAISIP--NNPISQLSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSY 343
SS+ TFPA+ + +LS LL Q P SQ+ QIH+QI+TQ SS SL+ +LI Y
Sbjct: 13 SSTATFPAVFQDKIHTTRKELSKLLHQRPPKSQLKQIHAQILTQELSSTASLVNSLIHCY 72
Query: 344 ISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIP 523
+ AR LF +P P ++WN +I+ Y K NS ES LF Q+L L+ P
Sbjct: 73 LHIKEVTSARFLFLHYPLPSPPILIWNLMIRVYCKLQNSSESFCLFRQLLNLDHRIRVFP 132
Query: 524 DKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIF 703
D+YTFTF++T+C+HQ S + G+ +HGL+++ G ES+++VGNSL+N YSVF +A+K+F
Sbjct: 133 DEYTFTFIVTSCAHQKSIVHGKIVHGLVVRNGLESNLYVGNSLINMYSVFKITDDAYKVF 192
Query: 704 DGMPQRDVITWTSLLRGYAKSG 769
D + +RDV +WTSL+ GYA +G
Sbjct: 193 DRITERDVFSWTSLICGYANNG 214
>gb|EPS59463.1| hypothetical protein M569_15345, partial [Genlisea aurea]
Length = 433
Score = 142 bits (358), Expect = 1e-31
Identities = 75/183 (40%), Positives = 112/183 (61%), Gaps = 1/183 (0%)
Frame = +2
Query: 224 LSHLLKQHPNPSQINQIHSQIITQ-TFSSNTSLIAALIRSYISSNNFIYARILFDSFPSC 400
LS LL + S + QIH++II Q T SLI +LI Y+ N A+ILFDS+P
Sbjct: 3 LSWLLNRRVPISAVEQIHARIIVQRTRFGGVSLIDSLIHCYLHWNRLAAAKILFDSYPLR 62
Query: 401 PPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPI 580
P +LWN +I+A++K ES+ LF M+A + D+YTF V+T+C+HQ
Sbjct: 63 SPPILLWNVVIRAFAKLRYRSESIALFRGMIAAGEFVAA--DEYTFNSVLTSCAHQQDVE 120
Query: 581 CGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYA 760
G +HG+ ++ G S+++VGNSL++ Y F EAHK+FD M RD+ +WTSL+R ++
Sbjct: 121 SGRAVHGMAMRNGFSSNLYVGNSLISVYGAFGLGDEAHKVFDEMSGRDIFSWTSLIRAHS 180
Query: 761 KSG 769
++G
Sbjct: 181 QNG 183
>ref|XP_007037424.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao] gi|508774669|gb|EOY21925.1|
Tetratricopeptide repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 551
Score = 126 bits (317), Expect = 7e-27
Identities = 73/197 (37%), Positives = 122/197 (61%), Gaps = 6/197 (3%)
Frame = +2
Query: 197 SIPNNPISQLS--HLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYI-SSNNFIY 367
++ N+ I Q S LL+++ +I QIH+QII FS ++ LI YI SSNN +
Sbjct: 10 NLVNSRILQQSIISLLQKYRTIKKITQIHTQIIINGFSQKNFILVNLISFYITSSNNLPH 69
Query: 368 ARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFV 547
A +F++ PST +WN++I+ YS+T N ++S+ L+ QM+A T +IPD +T++++
Sbjct: 70 ALKIFETIEK--PSTTIWNRVIRGYSRTENPEKSVELYNQMVA----TGAIPDGFTYSYL 123
Query: 548 ITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFA---KMGEAHKIFDGMPQ 718
++AC+ GE +HG ++ G S++FV +LVN Y++ +G A ++FD M +
Sbjct: 124 LSACARSGMLREGEQVHGKVLADGYCSNVFVRTNLVNLYAMVGGGDGIGYARRVFDEMGE 183
Query: 719 RDVITWTSLLRGYAKSG 769
R+V++W SLL GY + G
Sbjct: 184 RNVVSWNSLLAGYIRYG 200
Score = 58.2 bits (139), Expect = 3e-06
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Frame = +2
Query: 326 ALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNR 505
+L+ YI + AR +FD P + + W ++ +S+ +++L F QM R
Sbjct: 191 SLLAGYIRYGDVHMARRVFDEMPE--RNVVSWTTMVAGFSRNGKCRQALSFFNQM---RR 245
Query: 506 PTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD----IFVGNSLVNFYSVF 673
+ + D+ ++AC+ G+ IH I + + + N+L++ Y+
Sbjct: 246 ARVQL-DQVALLAALSACAELGDLESGKWIHSHIKETSRVRSQRLLVSLNNALIHMYASC 304
Query: 674 AKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
+ EA+++ MP+R ++WTS++ G AK G
Sbjct: 305 GLIEEAYQVLKYMPERSTVSWTSMIMGLAKQG 336
>ref|XP_002311156.2| hypothetical protein POPTR_0008s05220g [Populus trichocarpa]
gi|550332465|gb|EEE88523.2| hypothetical protein
POPTR_0008s05220g [Populus trichocarpa]
Length = 878
Score = 121 bits (304), Expect = 2e-25
Identities = 73/192 (38%), Positives = 110/192 (57%), Gaps = 3/192 (1%)
Frame = +2
Query: 200 IPNNPISQLSH---LLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYA 370
+P N I S+ LL + + QIH ++ ++ A LI+SY+ YA
Sbjct: 25 LPPNHIRNYSNYVSLLSSCKTLNSLLQIHVRLTVSGLQNDHLTNAHLIKSYLLFLKCNYA 84
Query: 371 RILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVI 550
R LFDS P+ PS +L+N II+AYS+T N QE++++++ ML PDKYTFTFV+
Sbjct: 85 RFLFDSLPN--PSVMLYNSIIRAYSRTKNHQEAINIYHCMLNKGLE----PDKYTFTFVL 138
Query: 551 TACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVI 730
AC+ L G +H II G E D F+G SLV+ Y + A K+FD MP++DV+
Sbjct: 139 KACTGALYFKEGILVHKDIIVRGLERDAFIGTSLVDMYCKMGDLKLARKVFDKMPEKDVV 198
Query: 731 TWTSLLRGYAKS 766
W++++ G ++S
Sbjct: 199 AWSAMILGLSQS 210
Score = 76.3 bits (186), Expect = 1e-11
Identities = 48/166 (28%), Positives = 76/166 (45%)
Frame = +2
Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
IH +II F S + ALI Y + A LF C + WN +I Y +
Sbjct: 555 IHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHR-TGCRKDEVSWNVMIAGYMHS 613
Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631
++ ++ F QM N P+ T V+ A +H + G +H +I++G +S
Sbjct: 614 GHAIDAFSAFCQMKLENIQ----PNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSK 669
Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
VGN L++ Y+ + + KIF M +D ++W +L GYA G
Sbjct: 670 TPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHG 715
Score = 66.2 bits (160), Expect = 1e-08
Identities = 44/167 (26%), Positives = 76/167 (45%)
Frame = +2
Query: 269 QIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSK 448
+IH Q S+ ++ ++ Y A+ LF + W+ II A+ +
Sbjct: 352 EIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKG--RDLVAWSAIIAAFVQ 409
Query: 449 TSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628
+ QE+L LF M +K + AC+ S G+++H +K +
Sbjct: 410 SGYPQEALSLFRSMQNEGLQA----NKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDL 465
Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
DI VG +LV+ Y+ A +F+ MP +DV+TW +++ GYA+ G
Sbjct: 466 DISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIG 512
Score = 56.6 bits (135), Expect = 9e-06
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 3/169 (1%)
Frame = +2
Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
+H + + S+ AL+ Y F A LF+ P + WN +I Y++
Sbjct: 454 MHCCAVKANVDLDISVGTALVSMYAKCGFFALALTLFNRMPC--KDVVTWNAMINGYAQI 511
Query: 452 SNSQESLHLFY--QMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCE 625
+L +F+ Q+ LN P+ T ++ A + G IHG IIK G E
Sbjct: 512 GEPFPALEMFHKLQLSELN------PNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFE 565
Query: 626 SDIFVGNSLVNFYSVFAKMGEAHKIFDGMP-QRDVITWTSLLRGYAKSG 769
S+ V +L++ Y+ + A +F ++D ++W ++ GY SG
Sbjct: 566 SECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSG 614
>ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 120 bits (302), Expect = 4e-25
Identities = 74/206 (35%), Positives = 119/206 (57%), Gaps = 5/206 (2%)
Frame = +2
Query: 164 LSSSSTTFPAISIPNNPISQLSHLLK-----QHPNPSQINQIHSQIITQTFSSNTSLIAA 328
++++++ FP++S ++ + H + +H NP + QIH+QII F + S I
Sbjct: 14 IATAASEFPSLS--SSTYTNYLHYPRLLSSCKHLNP--LLQIHAQIIVSGFKHHHS-ITH 68
Query: 329 LIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRP 508
LI Y + AR +FDS P+ PS ILWN +I+AY+++ E+L ++Y M+
Sbjct: 69 LINLYSLFHKCDLARSVFDSTPN--PSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126
Query: 509 TLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGE 688
PDKYTFTFV+ AC+ L+ G HG I + G E D+F+G LV+ YS +
Sbjct: 127 ----PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKR 182
Query: 689 AHKIFDGMPQRDVITWTSLLRGYAKS 766
A ++FD MP+RDV+ W +++ G ++S
Sbjct: 183 AREVFDKMPKRDVVAWNAMIAGLSQS 208
Score = 82.4 bits (202), Expect = 2e-13
Identities = 50/166 (30%), Positives = 84/166 (50%)
Frame = +2
Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
IH I+ F S+ + ALI Y + A LF+ + WN II AY +
Sbjct: 553 IHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNK-TDFTKDEVTWNVIIAAYMQN 611
Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631
+++E++ F+QM N P+ TF V+ A ++ + G H II++G S+
Sbjct: 612 GHAKEAISSFHQMRLENFH----PNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSN 667
Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
VGNSL++ Y+ ++ + K+F+ M +D ++W ++L GYA G
Sbjct: 668 TLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHG 713
Score = 71.6 bits (174), Expect = 3e-10
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
Frame = +2
Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
IH + S+ S AL+ Y F A F+ S + WN +I Y++
Sbjct: 452 IHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSS--RDIVTWNSLINGYAQI 509
Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631
+ ++ +FY++ R + PD T V+ AC+ G IHGLI+K+G ESD
Sbjct: 510 GDPYNAIDMFYKL----RLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESD 565
Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMP-QRDVITWTSLLRGYAKSG 769
V N+L++ Y+ + A +F+ +D +TW ++ Y ++G
Sbjct: 566 CHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNG 612
Score = 70.1 bits (170), Expect = 8e-10
Identities = 46/167 (27%), Positives = 76/167 (45%)
Frame = +2
Query: 269 QIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSK 448
+IH + Q S+ + L+ Y A+ LF + W+ II A +
Sbjct: 350 EIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG--RDLVAWSAIIAALVQ 407
Query: 449 TSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628
T +E+L LF +M P++ T ++ AC+ G++IH +K +S
Sbjct: 408 TGYPEEALSLFQEMQNQKMK----PNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDS 463
Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
D+ G +LV+ Y+ A F+ M RD++TW SL+ GYA+ G
Sbjct: 464 DLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIG 510
>emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 120 bits (301), Expect = 5e-25
Identities = 70/175 (40%), Positives = 103/175 (58%)
Frame = +2
Query: 242 QHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILW 421
+H NP + QIH+QII F + S I LI Y + AR +FDS P+ PS ILW
Sbjct: 43 KHLNP--LLQIHAQIIVSGFKHHHS-ITHLINLYSLFHKCDLARSVFDSTPN--PSRILW 97
Query: 422 NQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHG 601
N +I+AY+++ E+L ++Y M+ PDKYTFTFV+ AC+ L+ G HG
Sbjct: 98 NSMIRAYTRSKQYNEALEMYYCMVEKGLE----PDKYTFTFVLKACTGALNLQEGVWFHG 153
Query: 602 LIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKS 766
I + G E D+F+G LV+ YS + A ++FD MP+RDV+ W +++ G ++S
Sbjct: 154 EIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQS 208
Score = 82.4 bits (202), Expect = 2e-13
Identities = 50/166 (30%), Positives = 84/166 (50%)
Frame = +2
Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
IH I+ F S+ + ALI Y + A LF+ + WN II AY +
Sbjct: 553 IHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNK-TDFTKDEVTWNVIIAAYMQN 611
Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631
+++E++ F+QM N P+ TF V+ A ++ + G H II++G S+
Sbjct: 612 GHAKEAISSFHQMRLENFH----PNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSN 667
Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
VGNSL++ Y+ ++ + K+F+ M +D ++W ++L GYA G
Sbjct: 668 TLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHG 713
Score = 71.6 bits (174), Expect = 3e-10
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
Frame = +2
Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
IH + S+ S AL+ Y F A F+ S + WN +I Y++
Sbjct: 452 IHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSS--RDIVTWNSLINGYAQI 509
Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631
+ ++ +FY++ R + PD T V+ AC+ G IHGLI+K+G ESD
Sbjct: 510 GDPYNAIDMFYKL----RLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESD 565
Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMP-QRDVITWTSLLRGYAKSG 769
V N+L++ Y+ + A +F+ +D +TW ++ Y ++G
Sbjct: 566 CHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNG 612
Score = 70.1 bits (170), Expect = 8e-10
Identities = 46/167 (27%), Positives = 76/167 (45%)
Frame = +2
Query: 269 QIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSK 448
+IH + Q S+ + L+ Y A+ LF + W+ II A +
Sbjct: 350 EIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG--RDLVAWSAIIAALVQ 407
Query: 449 TSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628
T +E+L LF +M P++ T ++ AC+ G++IH +K +S
Sbjct: 408 TGYPEEALSLFQEMQNQKMK----PNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDS 463
Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
D+ G +LV+ Y+ A F+ M RD++TW SL+ GYA+ G
Sbjct: 464 DLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIG 510
>ref|XP_007033247.1| Mitochondrial editing factor 22 [Theobroma cacao]
gi|508712276|gb|EOY04173.1| Mitochondrial editing factor
22 [Theobroma cacao]
Length = 735
Score = 120 bits (300), Expect = 7e-25
Identities = 68/211 (32%), Positives = 106/211 (50%)
Frame = +2
Query: 137 PIKIQTPVFLSSSSTTFPAISIPNNPISQLSHLLKQHPNPSQINQIHSQIITQTFSSNTS 316
P P +ST F + S ++LL + + QIH++++ N
Sbjct: 42 PFNFLKPFSSHDNSTIFHTFNFD----SFYANLLDSSTRNAHLTQIHAKLVLLDIHQNGF 97
Query: 317 LIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLA 496
LI LI S ++ YAR +FD FP P LWN I++ YSK + ++ ++ +M
Sbjct: 98 LITKLINSAVNLGEISYARKVFDEFPD--PDVFLWNAIVRGYSKCNMFANAIEMYSRMQV 155
Query: 497 LNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFA 676
L PD YT V+ AC G +HG I ++G E D+FV N +V FY+
Sbjct: 156 L----WVSPDGYTLPHVLKACGGLPGFEMGRRVHGQIFRLGFEKDVFVQNGIVAFYAKCG 211
Query: 677 KMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
K+ A +FDG+ R+V++WTS++ GYA++G
Sbjct: 212 KIESAKVVFDGLELRNVVSWTSMISGYAQNG 242
Score = 75.1 bits (183), Expect = 3e-11
Identities = 46/166 (27%), Positives = 77/166 (46%)
Frame = +2
Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
IH +I L+ AL Y + AR FD P+ ILWN +I Y+K
Sbjct: 285 IHGCVIKMGLELEPDLLIALTAMYAKCGQVMVARSFFDQMKV--PNLILWNAMISGYAKN 342
Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631
++E++ LF +M++ N T D T + AC+ S + I K D
Sbjct: 343 GYAEEAVELFRKMISNNIRT----DSITARCAVVACAQVGSLGLARWMDNYISKSEHRDD 398
Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
IFV ++L++ ++ + A +FD ++DV+ W++++ GY G
Sbjct: 399 IFVNSALIDMFAKCGNVDMARMVFDRTLEKDVVVWSAMIVGYGLHG 444
Score = 65.9 bits (159), Expect = 2e-08
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 6/188 (3%)
Frame = +2
Query: 224 LSHLLKQH---PNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFP 394
L H+LK P ++H QI F + + ++ Y A+++FD
Sbjct: 165 LPHVLKACGGLPGFEMGRRVHGQIFRLGFEKDVFVQNGIVAFYAKCGKIESAKVVFDGLE 224
Query: 395 SCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLS 574
+ + W +I Y++ E+L +F +M + +PD F I A +
Sbjct: 225 L--RNVVSWTSMISGYAQNGQPIEALRVFDEMRKMG----VMPDWVAFVSAIRAHTDVED 278
Query: 575 PICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGE---AHKIFDGMPQRDVITWTSL 745
G++IHG +IK+G E + + L+ +++AK G+ A FD M ++I W ++
Sbjct: 279 LEHGKSIHGCVIKMGLELE---PDLLIALTAMYAKCGQVMVARSFFDQMKVPNLILWNAM 335
Query: 746 LRGYAKSG 769
+ GYAK+G
Sbjct: 336 ISGYAKNG 343
>ref|NP_198573.1| pentatricopeptide repeat (PPR-like) superfamily protein
[Arabidopsis thaliana]
gi|75170664|sp|Q9FHR3.1|PP403_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At5g37570 gi|9757967|dbj|BAB08303.1| unnamed
protein product [Arabidopsis thaliana]
gi|332006824|gb|AED94207.1| CCCH-type zinc finger
protein SOMNUS [Arabidopsis thaliana]
Length = 550
Score = 119 bits (297), Expect = 2e-24
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 1/183 (0%)
Frame = +2
Query: 224 LSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFI-YARILFDSFPSC 400
L L K + +NQIH++II + + +LI+ I S SS++ + Y+ +F+ PS
Sbjct: 13 LETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPS- 71
Query: 401 PPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPI 580
P T LWN +I+ YS E++ + +M+ R L+ PD+YTF V+ CS+
Sbjct: 72 -PGTYLWNHLIKGYSNKFLFFETVSILMRMM---RTGLARPDEYTFPLVMKVCSNNGQVR 127
Query: 581 CGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYA 760
G ++HGL+++IG + D+ VG S V+FY + A K+F MP+R+ ++WT+L+ Y
Sbjct: 128 VGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYV 187
Query: 761 KSG 769
KSG
Sbjct: 188 KSG 190
>ref|XP_006430120.1| hypothetical protein CICLE_v10011370mg [Citrus clementina]
gi|557532177|gb|ESR43360.1| hypothetical protein
CICLE_v10011370mg [Citrus clementina]
Length = 574
Score = 119 bits (297), Expect = 2e-24
Identities = 75/223 (33%), Positives = 122/223 (54%), Gaps = 9/223 (4%)
Frame = +2
Query: 128 LPKPIKIQTPVFLSSSSTTFPAISI--------PNNPISQLSHLLKQHPNPSQINQIHSQ 283
+PK + TP S S+ P S P+ +S L+ L+K+ + ++Q+HS
Sbjct: 1 MPKIDEPNTPCKHKSCSSMLPNCSRSAPINFPKPSCLLSALT-LIKKCKLQTHLHQVHSH 59
Query: 284 IITQTFSSNTSLIAALIRSYIS-SNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNS 460
II + + SL+A I S + Y+ +F+ + P+T LWN +++ YS+ S
Sbjct: 60 IIKKGLDQDHSLVAHFISLCHSLATPLSYSSAVFNRIVN--PNTFLWNTLLKGYSQNSRF 117
Query: 461 QESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFV 640
E +F +++ ++PDKYTF VI ACSH LS G IH +I+ G + D+FV
Sbjct: 118 IEVFTIFVRLIREE----AVPDKYTFPLVIKACSHVLSVREGTAIHAAVIRWGVDEDVFV 173
Query: 641 GNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
G SL++ Y ++ A K+FD MP+R+V++WT+++ GYA G
Sbjct: 174 GTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVG 216
>ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 518
Score = 119 bits (297), Expect = 2e-24
Identities = 63/187 (33%), Positives = 111/187 (59%), Gaps = 2/187 (1%)
Frame = +2
Query: 215 ISQLSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISS--NNFIYARILFDS 388
+ Q LL++ N ++ QIH Q++ + + ++ L+ +Y S +N YAR++FD
Sbjct: 11 VEQTMSLLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDR 70
Query: 389 FPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQ 568
S P+T++WN +I+AYS +++ +E+L L++QML + P + YTF F++ ACS
Sbjct: 71 ISS--PNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPH----NAYTFPFLLKACSAL 124
Query: 569 LSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLL 748
+ IH IIK G S+++ NSL+ Y++ + AH +FD +P RD+++W +++
Sbjct: 125 SALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMI 184
Query: 749 RGYAKSG 769
GY K G
Sbjct: 185 DGYIKCG 191
Score = 69.3 bits (168), Expect = 1e-09
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 27/198 (13%)
Frame = +2
Query: 257 SQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQ 436
++ +QIH QII + F S +L+R Y S + A +LFD PS + WN +I
Sbjct: 128 AETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPS--RDIVSWNTMID 185
Query: 437 AYSKTSNSQESLHLFYQM-----------------LALNRPTLSI----------PDKYT 535
Y K N + + +F M +++ L + PDK T
Sbjct: 186 GYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKIT 245
Query: 536 FTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMP 715
+ ++AC+ + G+ IH I K + D +G +L++ Y +M +A +F +
Sbjct: 246 LSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLE 305
Query: 716 QRDVITWTSLLRGYAKSG 769
++ V TWT+++ G+A G
Sbjct: 306 KKCVYTWTAIIGGFAVHG 323
>ref|XP_007027873.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508716478|gb|EOY08375.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 598
Score = 118 bits (296), Expect = 2e-24
Identities = 68/199 (34%), Positives = 112/199 (56%), Gaps = 4/199 (2%)
Frame = +2
Query: 185 FPAISIPN----NPISQLSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISS 352
FP + +P+ N + L LL+ +Q++QIH+ II + + LI + S
Sbjct: 47 FPLMPVPHPHLLNTLPSLPTLLRSCKTQNQLHQIHAHIIKKGLQQDHILITLFLSL---S 103
Query: 353 NNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKY 532
+ Y+ +F+ PST +WN +++ YS+ S+ ++L LF +M + +PDKY
Sbjct: 104 TSLSYSTSVFNYL--FHPSTCVWNSLLKGYSRNSSFLQTLSLFIRM----KRDGGLPDKY 157
Query: 533 TFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGM 712
T++ VI ACS Q G+ +HGL +K G + D+FVG SLV+FY ++ A K+FD M
Sbjct: 158 TYSLVIKACSSQFKAWEGKMLHGLALKGGGKEDVFVGTSLVDFYGKIMEIFNARKVFDEM 217
Query: 713 PQRDVITWTSLLRGYAKSG 769
+R+V++WT+L+ G G
Sbjct: 218 SERNVVSWTALVAGCINVG 236
>ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 118 bits (296), Expect = 2e-24
Identities = 73/214 (34%), Positives = 111/214 (51%), Gaps = 35/214 (16%)
Frame = +2
Query: 233 LLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYI---SSNNFIYARILFDSFPSCP 403
LL+ +QI QIH+ II + N ++A L+R S+N+ +YAR +FD PS
Sbjct: 9 LLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPS-- 66
Query: 404 PSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIP-DKYTFTFVITACSHQLSPI 580
P T +WN +I+AY + N QES+ LF+QM R IP D Y+ + VI AC P
Sbjct: 67 PDTFIWNTMIRAYLNSQNPQESMSLFFQM----RHQECIPIDSYSLSLVIQACGRLKDPG 122
Query: 581 CGENIHGLIIKIGCESDIFVGNSLVNFYSVF----------------------------A 676
G+ +H ++KIG SD+FV +L+ Y+ F
Sbjct: 123 NGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYV 182
Query: 677 KMGE---AHKIFDGMPQRDVITWTSLLRGYAKSG 769
++GE AH +FD MP+RD+++W +++ G+A G
Sbjct: 183 RVGEINLAHDLFDRMPERDLVSWNTMIHGHASLG 216
Score = 84.3 bits (207), Expect = 4e-14
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 8/203 (3%)
Frame = +2
Query: 185 FPAISIPNNPISQLSH--------LLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRS 340
F I I N + +++H LL ++ +IN H + + + +I
Sbjct: 153 FGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHD-LFDRMPERDLVSWNTMIHG 211
Query: 341 YISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSI 520
+ S + A+ LFD +C I W+ +I AY+K S E+L LF++M N +
Sbjct: 212 HASLGDVGTAKKLFDR--TCERDLISWSSMIAAYAKARQSNEALRLFHEMQLAN----VL 265
Query: 521 PDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKI 700
PDK T V++AC + G+ IH I + E D+ +G SLV+ Y+ + + ++
Sbjct: 266 PDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRV 325
Query: 701 FDGMPQRDVITWTSLLRGYAKSG 769
F+GM RDV W++++ G A G
Sbjct: 326 FNGMNNRDVFAWSAMIMGLANHG 348
>ref|XP_002870540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297316376|gb|EFH46799.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 547
Score = 118 bits (296), Expect = 2e-24
Identities = 65/182 (35%), Positives = 104/182 (57%)
Frame = +2
Query: 224 LSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCP 403
L LLK + +NQIH++II + + +LI+ I S SS++ Y+ +F+ P
Sbjct: 13 LETLLKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISS--SSSSLSYSSSVFERVPY-- 68
Query: 404 PSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPIC 583
P T LWN +I+ YS E++ L +M+ R + PD+YTF V+ CS+
Sbjct: 69 PGTYLWNHLIKGYSNKFLFFETVSLLMRMM---RTGFARPDEYTFPLVMKVCSNNAEFRV 125
Query: 584 GENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAK 763
G +HGL+++IG + D+ +G S V+FY + A K+F MP+R+V++WT+L+ Y K
Sbjct: 126 GSTVHGLVLRIGFDKDVVLGTSFVDFYGKCKDLCSARKVFGEMPERNVVSWTALIVAYVK 185
Query: 764 SG 769
SG
Sbjct: 186 SG 187
>emb|CBI41082.3| unnamed protein product [Vitis vinifera]
Length = 413
Score = 118 bits (295), Expect = 3e-24
Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 7/186 (3%)
Frame = +2
Query: 233 LLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYI---SSNNFIYARILFDSFPSCP 403
LL+ +QI QIH+ II + N ++A L+R S+N+ +YAR +FD PS
Sbjct: 3 LLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPS-- 60
Query: 404 PSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIP-DKYTFTFVITACSHQLSPI 580
P T +WN +I+AY + N QES+ LF+QM R IP D Y+ + VI AC P
Sbjct: 61 PDTFIWNTMIRAYLNSQNPQESMSLFFQM----RHQECIPIDSYSLSLVIQACGRLKDPG 116
Query: 581 CGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQ---RDVITWTSLLR 751
G+ +H ++KIG SD+FV +L+ Y+ F + A I D M RD+++W +++
Sbjct: 117 NGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLRDLVSWNTMIH 176
Query: 752 GYAKSG 769
G+A G
Sbjct: 177 GHASLG 182
Score = 60.1 bits (144), Expect(2) = 4e-08
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Frame = +2
Query: 251 NPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTIL-WNQ 427
+P ++H+Q++ S+ + ALI Y + AR + D ++ WN
Sbjct: 114 DPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLRDLVSWNT 173
Query: 428 IIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLI 607
+I ++ +S E+L LF++M N +PDK T V++AC + G+ IH I
Sbjct: 174 MIHGHASLGDSNEALRLFHEMQLAN----VLPDKVTMVSVLSACGDVGALGMGKMIHECI 229
Query: 608 IKIGCESDIFVGNSLVNFYSVFAKMGE 688
+ E D+ +G SLV+ Y AK G+
Sbjct: 230 ERNRIEIDLKLGTSLVDMY---AKCGD 253
Score = 24.3 bits (51), Expect(2) = 4e-08
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 114 KALLSFQNPSKFKLLSFSPRHQPLFP 191
+A L+ QNP + L F RHQ P
Sbjct: 71 RAYLNSQNPQESMSLFFQMRHQECIP 96
>ref|XP_004289268.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Fragaria vesca subsp. vesca]
Length = 794
Score = 117 bits (294), Expect = 3e-24
Identities = 60/167 (35%), Positives = 97/167 (58%)
Frame = +2
Query: 269 QIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSK 448
+IH+QI+T F + L L+ SY S +YAR +FD+ P S++ W+ ++ Y+K
Sbjct: 68 RIHAQILTSGFRQDVFLANLLLDSYKKSGYIVYARNVFDTMPD--RSSVTWSSMVSMYTK 125
Query: 449 TSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628
S+E+L +F + +R + P++YTF VI AC+ G +H ++K G +
Sbjct: 126 HGKSEEALKVFSEF---HRSSDGRPNEYTFPSVIRACTQFGGVDQGSQVHCFVVKTGFDK 182
Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
++FVG SL++FY + EA IFDG+ + +TWT ++ GYAKSG
Sbjct: 183 EVFVGTSLIDFYVKMGDIEEARLIFDGLEVKSAVTWTIVIAGYAKSG 229
Score = 99.4 bits (246), Expect = 1e-18
Identities = 54/169 (31%), Positives = 93/169 (55%)
Frame = +2
Query: 260 QINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQA 439
Q +Q+H ++ F + +LI Y+ + AR++FD S + W +I
Sbjct: 167 QGSQVHCFVVKTGFDKEVFVGTSLIDFYVKMGDIEEARLIFDGLEV--KSAVTWTIVIAG 224
Query: 440 YSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIG 619
Y+K+ S+ +L LFYQM R T +PDKY + ++TACS G+ IH +++ G
Sbjct: 225 YAKSGKSEAALKLFYQM----RDT-DVPDKYVLSALLTACSALKFIGGGKQIHAYVLRRG 279
Query: 620 CESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKS 766
E D+ V N L++FY+ ++ K+FD + RD+I+WT+++ GY ++
Sbjct: 280 TEMDVSVVNVLIDFYTKCGQVLAGQKLFDKVVDRDLISWTTMIAGYMQN 328
Score = 90.1 bits (222), Expect = 8e-16
Identities = 52/149 (34%), Positives = 82/149 (55%)
Frame = +2
Query: 323 AALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALN 502
+ALI Y + A+++F+ ++WN + Y++ S+E+L L Y L L+
Sbjct: 490 SALIDVYSKCSCTREAKLVFEEMNE--KDIVVWNAMFSGYAQQQESEEALKL-YSKLQLS 546
Query: 503 RPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKM 682
R IP+++TF V++A S S G+ H IIK+G E+D FV N+LV+ YS +
Sbjct: 547 R---QIPNEFTFASVVSAASSLASVQHGQQFHSQIIKVGLENDPFVTNALVDMYSKCGSI 603
Query: 683 GEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
EAHK+FD +DV W +++ YA G
Sbjct: 604 EEAHKLFDSKTLKDVACWNTIISTYAHHG 632
Score = 70.5 bits (171), Expect = 6e-10
Identities = 40/165 (24%), Positives = 79/165 (47%)
Frame = +2
Query: 269 QIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSK 448
QIH+ ++ + + S++ LI Y + + LFD I W +I Y +
Sbjct: 270 QIHAYVLRRGTEMDVSVVNVLIDFYTKCGQVLAGQKLFDKVVD--RDLISWTTMIAGYMQ 327
Query: 449 TSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628
S E++ LF +M L PD Y + ++T+C + G +H I++
Sbjct: 328 NSMHVEAVKLFSEMTRLGWR----PDGYGCSSILTSCGSLEALKHGREVHAYTIRVDLVY 383
Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAK 763
+ +V NSL++ Y+ + +A +FD M +V+++ +++ GY++
Sbjct: 384 EYYVKNSLIDMYAKCDSLTDARTVFDSMTDHNVVSYNAMIEGYSR 428
Score = 70.1 bits (170), Expect = 8e-10
Identities = 42/146 (28%), Positives = 74/146 (50%)
Frame = +2
Query: 326 ALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNR 505
+LI Y ++ AR +FDS + + +N +I+ YS+ E+L LF M R
Sbjct: 390 SLIDMYAKCDSLTDARTVFDSMTD--HNVVSYNAMIEGYSRQDKLAEALDLFNLM----R 443
Query: 506 PTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMG 685
P TF ++ + L+ + +HG+ K G DIF G++L++ YS +
Sbjct: 444 LRSVQPSILTFVSLLGVSAASLTLELSKQVHGMTTKYGLCLDIFAGSALIDVYSKCSCTR 503
Query: 686 EAHKIFDGMPQRDVITWTSLLRGYAK 763
EA +F+ M ++D++ W ++ GYA+
Sbjct: 504 EAKLVFEEMNEKDIVVWNAMFSGYAQ 529