BLASTX nr result

ID: Akebia25_contig00020086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00020086
         (769 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containi...   227   4e-57
emb|CBI15077.3| unnamed protein product [Vitis vinifera]              227   4e-57
ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containi...   226   5e-57
gb|EXC31176.1| hypothetical protein L484_004942 [Morus notabilis]     224   3e-56
ref|XP_004236513.1| PREDICTED: pentatricopeptide repeat-containi...   186   1e-44
ref|XP_006345185.1| PREDICTED: pentatricopeptide repeat-containi...   184   2e-44
gb|EPS59463.1| hypothetical protein M569_15345, partial [Genlise...   142   1e-31
ref|XP_007037424.1| Tetratricopeptide repeat-like superfamily pr...   126   7e-27
ref|XP_002311156.2| hypothetical protein POPTR_0008s05220g [Popu...   121   2e-25
ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containi...   120   4e-25
emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]   120   5e-25
ref|XP_007033247.1| Mitochondrial editing factor 22 [Theobroma c...   120   7e-25
ref|NP_198573.1| pentatricopeptide repeat (PPR-like) superfamily...   119   2e-24
ref|XP_006430120.1| hypothetical protein CICLE_v10011370mg [Citr...   119   2e-24
ref|XP_003612041.1| Pentatricopeptide repeat-containing protein ...   119   2e-24
ref|XP_007027873.1| Pentatricopeptide repeat superfamily protein...   118   2e-24
ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containi...   118   2e-24
ref|XP_002870540.1| pentatricopeptide repeat-containing protein ...   118   2e-24
emb|CBI41082.3| unnamed protein product [Vitis vinifera]              118   3e-24
ref|XP_004289268.1| PREDICTED: pentatricopeptide repeat-containi...   117   3e-24

>ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 663

 Score =  227 bits (578), Expect = 4e-57
 Identities = 123/234 (52%), Positives = 164/234 (70%), Gaps = 9/234 (3%)
 Frame = +2

Query: 95  ISHLKAKGIVVLPKPIKIQTPVFLSSSSTTFP--------AISIPNNPISQLSHLLKQHP 250
           +S L +  I  L +P  +Q+P+   SS+T+          + S+P++  S    LLK+ P
Sbjct: 9   LSLLFSTKIPRLQEPFYVQSPLVYISSNTSSAIWEPSGTSSFSLPSH--STFVQLLKKRP 66

Query: 251 NPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQI 430
           + +QI QIH+Q++T   + NTSL+  LI SYI   N  +ARI+FD FPS PP TI+WN +
Sbjct: 67  SLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPP-TIIWNLM 125

Query: 431 IQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACS-HQLSPICGENIHGLI 607
           IQAYSKT +SQESL+LF+QMLA  RPT +  DKYTFTFV TACS H      GEN+HG++
Sbjct: 126 IQAYSKTPSSQESLYLFHQMLAHGRPTSA--DKYTFTFVFTACSRHPTLRGYGENVHGMV 183

Query: 608 IKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
           +K G ESDIFVGNSLVN YS+F++M +A ++FD MPQRDVITWTS+++GYA  G
Sbjct: 184 VKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRG 237



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 37/148 (25%), Positives = 72/148 (48%)
 Frame = +2

Query: 326 ALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNR 505
           ++++ Y      + AR LFD  P    + + W  ++  Y       E+L  F  ML  + 
Sbjct: 228 SVVKGYAMRGELVRARELFDMMPG--RNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDE 285

Query: 506 PTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMG 685
                P++     +++AC+H  +   G+ IH  I K        +  +L++ Y+   ++ 
Sbjct: 286 VK---PNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRID 342

Query: 686 EAHKIFDGMPQRDVITWTSLLRGYAKSG 769
            A ++FDG+ +RD++TWTS++ G +  G
Sbjct: 343 CARRVFDGLHKRDLLTWTSMISGLSMHG 370


>emb|CBI15077.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  227 bits (578), Expect = 4e-57
 Identities = 123/234 (52%), Positives = 164/234 (70%), Gaps = 9/234 (3%)
 Frame = +2

Query: 95  ISHLKAKGIVVLPKPIKIQTPVFLSSSSTTFP--------AISIPNNPISQLSHLLKQHP 250
           +S L +  I  L +P  +Q+P+   SS+T+          + S+P++  S    LLK+ P
Sbjct: 9   LSLLFSTKIPRLQEPFYVQSPLVYISSNTSSAIWEPSGTSSFSLPSH--STFVQLLKKRP 66

Query: 251 NPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQI 430
           + +QI QIH+Q++T   + NTSL+  LI SYI   N  +ARI+FD FPS PP TI+WN +
Sbjct: 67  SLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPP-TIIWNLM 125

Query: 431 IQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACS-HQLSPICGENIHGLI 607
           IQAYSKT +SQESL+LF+QMLA  RPT +  DKYTFTFV TACS H      GEN+HG++
Sbjct: 126 IQAYSKTPSSQESLYLFHQMLAHGRPTSA--DKYTFTFVFTACSRHPTLRGYGENVHGMV 183

Query: 608 IKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
           +K G ESDIFVGNSLVN YS+F++M +A ++FD MPQRDVITWTS+++GYA  G
Sbjct: 184 VKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRG 237



 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 61/166 (36%), Positives = 86/166 (51%)
 Frame = +2

Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
           IH  I       ++++  ALI  Y        AR +FD         + W  +I   S  
Sbjct: 282 IHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHK--RDLLTWTSMISGLSMH 339

Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631
               E L  F +MLA        PD  T   V+  CSH    +  E +HG+++K G ES+
Sbjct: 340 GLGAECLWTFSEMLAEGFK----PDDITLLGVLNGCSHS-GLVEEEIVHGMVVKSGFESN 394

Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
           ++VGNS++N  SVFA+M +A K+F+ M +RDV +WTSLL GYAK G
Sbjct: 395 LYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHG 440



 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
 Frame = +2

Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
           +H  ++   F SN  +  ++I           AR +F+           W  ++  Y+K 
Sbjct: 382 VHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSE--RDVFSWTSLLGGYAKH 439

Query: 452 SN-SQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628
               + SL  F  ML  +R     P++     V++AC+H  +   G  IH  I KIG   
Sbjct: 440 GEMDRASLTFFCNMLCDDRVN---PNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQ 496

Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
              +  +L++ Y+   ++  A ++F+G+ +RDV+++TS++ G +  G
Sbjct: 497 SSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLSYHG 543


>ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 684

 Score =  226 bits (577), Expect = 5e-57
 Identities = 120/236 (50%), Positives = 156/236 (66%), Gaps = 7/236 (2%)
 Frame = +2

Query: 83  QMLVISHLKAKGIVVLPKPIKIQTPVFLSSSSTTFPAISIPNNPI-------SQLSHLLK 241
           Q+ VIS       + + K  K  T  F   SS TFP+ISIP NPI          S LL 
Sbjct: 24  QIHVISKAITLNPIAVSKHFKFIT-YFSFCSSNTFPSISIPTNPIPIDLPNPQTFSLLLN 82

Query: 242 QHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILW 421
           Q P  S + QIH+Q++TQ  SSN SL A+LI  Y+ + N   ARILFD +PS  P   LW
Sbjct: 83  QRPKLSPLQQIHAQVVTQALSSNASLTASLIHCYLCAKNHPNARILFDHYPSPSPPIKLW 142

Query: 422 NQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHG 601
           N +I+ YSK  NSQE +HLF +ML L+ P   +PD+YTFTFVIT+CSHQ+S I GE +HG
Sbjct: 143 NVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISLIYGEIVHG 202

Query: 602 LIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
           +++K G ES+++VGNS++N  SVFA+M +A K+F+ M +RDV +WTSLL GYAK G
Sbjct: 203 MVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHG 258


>gb|EXC31176.1| hypothetical protein L484_004942 [Morus notabilis]
          Length = 660

 Score =  224 bits (571), Expect = 3e-56
 Identities = 113/207 (54%), Positives = 145/207 (70%), Gaps = 7/207 (3%)
 Frame = +2

Query: 170 SSSTTFPAISIPNN------PISQ-LSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAA 328
           SSSTT PAIS P N      PI Q L  LLK+ P+   + QIH++++T   SS+ SL  +
Sbjct: 25  SSSTTSPAISRPTNKIPFDHPIPQTLFQLLKKGPSLPNLKQIHAKVVTFALSSHASLTTS 84

Query: 329 LIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRP 508
           LI  Y+   +   ARILFD +PS  P T++WN +I+AYSK  NSQESLHLF QMLA+N  
Sbjct: 85  LINCYLCIKDLNKARILFDRYPSSLPPTLVWNLMIRAYSKLQNSQESLHLFTQMLAMNEG 144

Query: 509 TLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGE 688
             ++PDKYTFTFVIT+CSHQ S  CGE +HG+ +K G E D+FVGNS++N Y+ FA+  +
Sbjct: 145 LKAVPDKYTFTFVITSCSHQNSMHCGEVVHGMAVKNGLELDLFVGNSVINVYAFFARWED 204

Query: 689 AHKIFDGMPQRDVITWTSLLRGYAKSG 769
           A K+FDGMP+RD  TWT LLRGY + G
Sbjct: 205 AQKVFDGMPERDAFTWTGLLRGYTRGG 231


>ref|XP_004236513.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum lycopersicum]
          Length = 618

 Score =  186 bits (471), Expect = 1e-44
 Identities = 98/230 (42%), Positives = 142/230 (61%), Gaps = 2/230 (0%)
 Frame = +2

Query: 86  MLVISHLKAKGIVVLPKPIKIQTPVFLSSSSTTFPAISIPNNPIS--QLSHLLKQHPNPS 259
           M  +S  KAK + V+    +I       SS+ TF A+      I+  +L  LL Q P  S
Sbjct: 1   MRFLSWRKAKHLTVIKPKCRI-----CYSSTATFAAVFQDKIHITRKELCKLLHQRPPKS 55

Query: 260 QINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQA 439
           Q+ QIH+QI+TQ  SS  S++ +LI  Y+       AR LF   P   P  ++WN +I+ 
Sbjct: 56  QLKQIHAQILTQELSSTASIVNSLIHCYLHIKEVTSARFLFLHHPLSSPPILIWNLMIRV 115

Query: 440 YSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIG 619
           Y K  NS ES  LF Q+L L+ P   +PD+YTFTF++T+C+HQ S + G+ +HGL+++ G
Sbjct: 116 YCKLQNSSESFSLFRQLLNLDHPIRVLPDEYTFTFIVTSCAHQKSFVHGKIVHGLVVRNG 175

Query: 620 CESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
            ES+++VGNSL+N YSVF    +A+K+FD +  RDV +WTSL+ GYA +G
Sbjct: 176 LESNLYVGNSLINMYSVFKITDDAYKVFDRIADRDVFSWTSLICGYANNG 225


>ref|XP_006345185.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 547

 Score =  184 bits (468), Expect = 2e-44
 Identities = 92/202 (45%), Positives = 132/202 (65%), Gaps = 2/202 (0%)
 Frame = +2

Query: 170 SSSTTFPAISIP--NNPISQLSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSY 343
           SS+ TFPA+     +    +LS LL Q P  SQ+ QIH+QI+TQ  SS  SL+ +LI  Y
Sbjct: 13  SSTATFPAVFQDKIHTTRKELSKLLHQRPPKSQLKQIHAQILTQELSSTASLVNSLIHCY 72

Query: 344 ISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIP 523
           +       AR LF  +P   P  ++WN +I+ Y K  NS ES  LF Q+L L+      P
Sbjct: 73  LHIKEVTSARFLFLHYPLPSPPILIWNLMIRVYCKLQNSSESFCLFRQLLNLDHRIRVFP 132

Query: 524 DKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIF 703
           D+YTFTF++T+C+HQ S + G+ +HGL+++ G ES+++VGNSL+N YSVF    +A+K+F
Sbjct: 133 DEYTFTFIVTSCAHQKSIVHGKIVHGLVVRNGLESNLYVGNSLINMYSVFKITDDAYKVF 192

Query: 704 DGMPQRDVITWTSLLRGYAKSG 769
           D + +RDV +WTSL+ GYA +G
Sbjct: 193 DRITERDVFSWTSLICGYANNG 214


>gb|EPS59463.1| hypothetical protein M569_15345, partial [Genlisea aurea]
          Length = 433

 Score =  142 bits (358), Expect = 1e-31
 Identities = 75/183 (40%), Positives = 112/183 (61%), Gaps = 1/183 (0%)
 Frame = +2

Query: 224 LSHLLKQHPNPSQINQIHSQIITQ-TFSSNTSLIAALIRSYISSNNFIYARILFDSFPSC 400
           LS LL +    S + QIH++II Q T     SLI +LI  Y+  N    A+ILFDS+P  
Sbjct: 3   LSWLLNRRVPISAVEQIHARIIVQRTRFGGVSLIDSLIHCYLHWNRLAAAKILFDSYPLR 62

Query: 401 PPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPI 580
            P  +LWN +I+A++K     ES+ LF  M+A      +  D+YTF  V+T+C+HQ    
Sbjct: 63  SPPILLWNVVIRAFAKLRYRSESIALFRGMIAAGEFVAA--DEYTFNSVLTSCAHQQDVE 120

Query: 581 CGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYA 760
            G  +HG+ ++ G  S+++VGNSL++ Y  F    EAHK+FD M  RD+ +WTSL+R ++
Sbjct: 121 SGRAVHGMAMRNGFSSNLYVGNSLISVYGAFGLGDEAHKVFDEMSGRDIFSWTSLIRAHS 180

Query: 761 KSG 769
           ++G
Sbjct: 181 QNG 183


>ref|XP_007037424.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao] gi|508774669|gb|EOY21925.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative [Theobroma cacao]
          Length = 551

 Score =  126 bits (317), Expect = 7e-27
 Identities = 73/197 (37%), Positives = 122/197 (61%), Gaps = 6/197 (3%)
 Frame = +2

Query: 197 SIPNNPISQLS--HLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYI-SSNNFIY 367
           ++ N+ I Q S   LL+++    +I QIH+QII   FS    ++  LI  YI SSNN  +
Sbjct: 10  NLVNSRILQQSIISLLQKYRTIKKITQIHTQIIINGFSQKNFILVNLISFYITSSNNLPH 69

Query: 368 ARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFV 547
           A  +F++     PST +WN++I+ YS+T N ++S+ L+ QM+A    T +IPD +T++++
Sbjct: 70  ALKIFETIEK--PSTTIWNRVIRGYSRTENPEKSVELYNQMVA----TGAIPDGFTYSYL 123

Query: 548 ITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFA---KMGEAHKIFDGMPQ 718
           ++AC+       GE +HG ++  G  S++FV  +LVN Y++      +G A ++FD M +
Sbjct: 124 LSACARSGMLREGEQVHGKVLADGYCSNVFVRTNLVNLYAMVGGGDGIGYARRVFDEMGE 183

Query: 719 RDVITWTSLLRGYAKSG 769
           R+V++W SLL GY + G
Sbjct: 184 RNVVSWNSLLAGYIRYG 200



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
 Frame = +2

Query: 326 ALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNR 505
           +L+  YI   +   AR +FD  P    + + W  ++  +S+    +++L  F QM    R
Sbjct: 191 SLLAGYIRYGDVHMARRVFDEMPE--RNVVSWTTMVAGFSRNGKCRQALSFFNQM---RR 245

Query: 506 PTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD----IFVGNSLVNFYSVF 673
             + + D+      ++AC+       G+ IH  I +          + + N+L++ Y+  
Sbjct: 246 ARVQL-DQVALLAALSACAELGDLESGKWIHSHIKETSRVRSQRLLVSLNNALIHMYASC 304

Query: 674 AKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
             + EA+++   MP+R  ++WTS++ G AK G
Sbjct: 305 GLIEEAYQVLKYMPERSTVSWTSMIMGLAKQG 336


>ref|XP_002311156.2| hypothetical protein POPTR_0008s05220g [Populus trichocarpa]
           gi|550332465|gb|EEE88523.2| hypothetical protein
           POPTR_0008s05220g [Populus trichocarpa]
          Length = 878

 Score =  121 bits (304), Expect = 2e-25
 Identities = 73/192 (38%), Positives = 110/192 (57%), Gaps = 3/192 (1%)
 Frame = +2

Query: 200 IPNNPISQLSH---LLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYA 370
           +P N I   S+   LL      + + QIH ++      ++    A LI+SY+      YA
Sbjct: 25  LPPNHIRNYSNYVSLLSSCKTLNSLLQIHVRLTVSGLQNDHLTNAHLIKSYLLFLKCNYA 84

Query: 371 RILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVI 550
           R LFDS P+  PS +L+N II+AYS+T N QE++++++ ML         PDKYTFTFV+
Sbjct: 85  RFLFDSLPN--PSVMLYNSIIRAYSRTKNHQEAINIYHCMLNKGLE----PDKYTFTFVL 138

Query: 551 TACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVI 730
            AC+  L    G  +H  II  G E D F+G SLV+ Y     +  A K+FD MP++DV+
Sbjct: 139 KACTGALYFKEGILVHKDIIVRGLERDAFIGTSLVDMYCKMGDLKLARKVFDKMPEKDVV 198

Query: 731 TWTSLLRGYAKS 766
            W++++ G ++S
Sbjct: 199 AWSAMILGLSQS 210



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 48/166 (28%), Positives = 76/166 (45%)
 Frame = +2

Query: 272  IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
            IH +II   F S   +  ALI  Y    +   A  LF     C    + WN +I  Y  +
Sbjct: 555  IHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHR-TGCRKDEVSWNVMIAGYMHS 613

Query: 452  SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631
             ++ ++   F QM   N      P+  T   V+ A +H  +   G  +H  +I++G +S 
Sbjct: 614  GHAIDAFSAFCQMKLENIQ----PNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSK 669

Query: 632  IFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
              VGN L++ Y+    +  + KIF  M  +D ++W  +L GYA  G
Sbjct: 670  TPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHG 715



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 44/167 (26%), Positives = 76/167 (45%)
 Frame = +2

Query: 269 QIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSK 448
           +IH     Q   S+ ++   ++  Y        A+ LF          + W+ II A+ +
Sbjct: 352 EIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKG--RDLVAWSAIIAAFVQ 409

Query: 449 TSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628
           +   QE+L LF  M           +K      + AC+   S   G+++H   +K   + 
Sbjct: 410 SGYPQEALSLFRSMQNEGLQA----NKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDL 465

Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
           DI VG +LV+ Y+       A  +F+ MP +DV+TW +++ GYA+ G
Sbjct: 466 DISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIG 512



 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 3/169 (1%)
 Frame = +2

Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
           +H   +      + S+  AL+  Y     F  A  LF+  P      + WN +I  Y++ 
Sbjct: 454 MHCCAVKANVDLDISVGTALVSMYAKCGFFALALTLFNRMPC--KDVVTWNAMINGYAQI 511

Query: 452 SNSQESLHLFY--QMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCE 625
                +L +F+  Q+  LN      P+  T   ++ A +       G  IHG IIK G E
Sbjct: 512 GEPFPALEMFHKLQLSELN------PNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFE 565

Query: 626 SDIFVGNSLVNFYSVFAKMGEAHKIFDGMP-QRDVITWTSLLRGYAKSG 769
           S+  V  +L++ Y+    +  A  +F     ++D ++W  ++ GY  SG
Sbjct: 566 SECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSG 614


>ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Vitis vinifera]
          Length = 1005

 Score =  120 bits (302), Expect = 4e-25
 Identities = 74/206 (35%), Positives = 119/206 (57%), Gaps = 5/206 (2%)
 Frame = +2

Query: 164 LSSSSTTFPAISIPNNPISQLSHLLK-----QHPNPSQINQIHSQIITQTFSSNTSLIAA 328
           ++++++ FP++S  ++  +   H  +     +H NP  + QIH+QII   F  + S I  
Sbjct: 14  IATAASEFPSLS--SSTYTNYLHYPRLLSSCKHLNP--LLQIHAQIIVSGFKHHHS-ITH 68

Query: 329 LIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRP 508
           LI  Y   +    AR +FDS P+  PS ILWN +I+AY+++    E+L ++Y M+     
Sbjct: 69  LINLYSLFHKCDLARSVFDSTPN--PSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126

Query: 509 TLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGE 688
               PDKYTFTFV+ AC+  L+   G   HG I + G E D+F+G  LV+ YS    +  
Sbjct: 127 ----PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKR 182

Query: 689 AHKIFDGMPQRDVITWTSLLRGYAKS 766
           A ++FD MP+RDV+ W +++ G ++S
Sbjct: 183 AREVFDKMPKRDVVAWNAMIAGLSQS 208



 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 50/166 (30%), Positives = 84/166 (50%)
 Frame = +2

Query: 272  IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
            IH  I+   F S+  +  ALI  Y    +   A  LF+         + WN II AY + 
Sbjct: 553  IHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNK-TDFTKDEVTWNVIIAAYMQN 611

Query: 452  SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631
             +++E++  F+QM   N      P+  TF  V+ A ++  +   G   H  II++G  S+
Sbjct: 612  GHAKEAISSFHQMRLENFH----PNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSN 667

Query: 632  IFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
              VGNSL++ Y+   ++  + K+F+ M  +D ++W ++L GYA  G
Sbjct: 668  TLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHG 713



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
 Frame = +2

Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
           IH   +     S+ S   AL+  Y     F  A   F+   S     + WN +I  Y++ 
Sbjct: 452 IHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSS--RDIVTWNSLINGYAQI 509

Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631
            +   ++ +FY++    R +   PD  T   V+ AC+       G  IHGLI+K+G ESD
Sbjct: 510 GDPYNAIDMFYKL----RLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESD 565

Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMP-QRDVITWTSLLRGYAKSG 769
             V N+L++ Y+    +  A  +F+     +D +TW  ++  Y ++G
Sbjct: 566 CHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNG 612



 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 46/167 (27%), Positives = 76/167 (45%)
 Frame = +2

Query: 269 QIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSK 448
           +IH   + Q   S+  +   L+  Y        A+ LF          + W+ II A  +
Sbjct: 350 EIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG--RDLVAWSAIIAALVQ 407

Query: 449 TSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628
           T   +E+L LF +M          P++ T   ++ AC+       G++IH   +K   +S
Sbjct: 408 TGYPEEALSLFQEMQNQKMK----PNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDS 463

Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
           D+  G +LV+ Y+       A   F+ M  RD++TW SL+ GYA+ G
Sbjct: 464 DLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIG 510


>emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  120 bits (301), Expect = 5e-25
 Identities = 70/175 (40%), Positives = 103/175 (58%)
 Frame = +2

Query: 242 QHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILW 421
           +H NP  + QIH+QII   F  + S I  LI  Y   +    AR +FDS P+  PS ILW
Sbjct: 43  KHLNP--LLQIHAQIIVSGFKHHHS-ITHLINLYSLFHKCDLARSVFDSTPN--PSRILW 97

Query: 422 NQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHG 601
           N +I+AY+++    E+L ++Y M+         PDKYTFTFV+ AC+  L+   G   HG
Sbjct: 98  NSMIRAYTRSKQYNEALEMYYCMVEKGLE----PDKYTFTFVLKACTGALNLQEGVWFHG 153

Query: 602 LIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKS 766
            I + G E D+F+G  LV+ YS    +  A ++FD MP+RDV+ W +++ G ++S
Sbjct: 154 EIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQS 208



 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 50/166 (30%), Positives = 84/166 (50%)
 Frame = +2

Query: 272  IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
            IH  I+   F S+  +  ALI  Y    +   A  LF+         + WN II AY + 
Sbjct: 553  IHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNK-TDFTKDEVTWNVIIAAYMQN 611

Query: 452  SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631
             +++E++  F+QM   N      P+  TF  V+ A ++  +   G   H  II++G  S+
Sbjct: 612  GHAKEAISSFHQMRLENFH----PNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSN 667

Query: 632  IFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
              VGNSL++ Y+   ++  + K+F+ M  +D ++W ++L GYA  G
Sbjct: 668  TLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHG 713



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
 Frame = +2

Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
           IH   +     S+ S   AL+  Y     F  A   F+   S     + WN +I  Y++ 
Sbjct: 452 IHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSS--RDIVTWNSLINGYAQI 509

Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631
            +   ++ +FY++    R +   PD  T   V+ AC+       G  IHGLI+K+G ESD
Sbjct: 510 GDPYNAIDMFYKL----RLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESD 565

Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMP-QRDVITWTSLLRGYAKSG 769
             V N+L++ Y+    +  A  +F+     +D +TW  ++  Y ++G
Sbjct: 566 CHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNG 612



 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 46/167 (27%), Positives = 76/167 (45%)
 Frame = +2

Query: 269 QIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSK 448
           +IH   + Q   S+  +   L+  Y        A+ LF          + W+ II A  +
Sbjct: 350 EIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG--RDLVAWSAIIAALVQ 407

Query: 449 TSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628
           T   +E+L LF +M          P++ T   ++ AC+       G++IH   +K   +S
Sbjct: 408 TGYPEEALSLFQEMQNQKMK----PNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDS 463

Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
           D+  G +LV+ Y+       A   F+ M  RD++TW SL+ GYA+ G
Sbjct: 464 DLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIG 510


>ref|XP_007033247.1| Mitochondrial editing factor 22 [Theobroma cacao]
           gi|508712276|gb|EOY04173.1| Mitochondrial editing factor
           22 [Theobroma cacao]
          Length = 735

 Score =  120 bits (300), Expect = 7e-25
 Identities = 68/211 (32%), Positives = 106/211 (50%)
 Frame = +2

Query: 137 PIKIQTPVFLSSSSTTFPAISIPNNPISQLSHLLKQHPNPSQINQIHSQIITQTFSSNTS 316
           P     P     +ST F   +      S  ++LL      + + QIH++++      N  
Sbjct: 42  PFNFLKPFSSHDNSTIFHTFNFD----SFYANLLDSSTRNAHLTQIHAKLVLLDIHQNGF 97

Query: 317 LIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLA 496
           LI  LI S ++     YAR +FD FP   P   LWN I++ YSK +    ++ ++ +M  
Sbjct: 98  LITKLINSAVNLGEISYARKVFDEFPD--PDVFLWNAIVRGYSKCNMFANAIEMYSRMQV 155

Query: 497 LNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFA 676
           L       PD YT   V+ AC        G  +HG I ++G E D+FV N +V FY+   
Sbjct: 156 L----WVSPDGYTLPHVLKACGGLPGFEMGRRVHGQIFRLGFEKDVFVQNGIVAFYAKCG 211

Query: 677 KMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
           K+  A  +FDG+  R+V++WTS++ GYA++G
Sbjct: 212 KIESAKVVFDGLELRNVVSWTSMISGYAQNG 242



 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 46/166 (27%), Positives = 77/166 (46%)
 Frame = +2

Query: 272 IHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKT 451
           IH  +I         L+ AL   Y      + AR  FD      P+ ILWN +I  Y+K 
Sbjct: 285 IHGCVIKMGLELEPDLLIALTAMYAKCGQVMVARSFFDQMKV--PNLILWNAMISGYAKN 342

Query: 452 SNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESD 631
             ++E++ LF +M++ N  T    D  T    + AC+   S      +   I K     D
Sbjct: 343 GYAEEAVELFRKMISNNIRT----DSITARCAVVACAQVGSLGLARWMDNYISKSEHRDD 398

Query: 632 IFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
           IFV ++L++ ++    +  A  +FD   ++DV+ W++++ GY   G
Sbjct: 399 IFVNSALIDMFAKCGNVDMARMVFDRTLEKDVVVWSAMIVGYGLHG 444



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 6/188 (3%)
 Frame = +2

Query: 224 LSHLLKQH---PNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFP 394
           L H+LK     P      ++H QI    F  +  +   ++  Y        A+++FD   
Sbjct: 165 LPHVLKACGGLPGFEMGRRVHGQIFRLGFEKDVFVQNGIVAFYAKCGKIESAKVVFDGLE 224

Query: 395 SCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLS 574
               + + W  +I  Y++     E+L +F +M  +      +PD   F   I A +    
Sbjct: 225 L--RNVVSWTSMISGYAQNGQPIEALRVFDEMRKMG----VMPDWVAFVSAIRAHTDVED 278

Query: 575 PICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGE---AHKIFDGMPQRDVITWTSL 745
              G++IHG +IK+G E +    + L+   +++AK G+   A   FD M   ++I W ++
Sbjct: 279 LEHGKSIHGCVIKMGLELE---PDLLIALTAMYAKCGQVMVARSFFDQMKVPNLILWNAM 335

Query: 746 LRGYAKSG 769
           + GYAK+G
Sbjct: 336 ISGYAKNG 343


>ref|NP_198573.1| pentatricopeptide repeat (PPR-like) superfamily protein
           [Arabidopsis thaliana]
           gi|75170664|sp|Q9FHR3.1|PP403_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g37570 gi|9757967|dbj|BAB08303.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332006824|gb|AED94207.1| CCCH-type zinc finger
           protein SOMNUS [Arabidopsis thaliana]
          Length = 550

 Score =  119 bits (297), Expect = 2e-24
 Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 1/183 (0%)
 Frame = +2

Query: 224 LSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFI-YARILFDSFPSC 400
           L  L K   +   +NQIH++II +    + +LI+  I S  SS++ + Y+  +F+  PS 
Sbjct: 13  LETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPS- 71

Query: 401 PPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPI 580
            P T LWN +I+ YS      E++ +  +M+   R  L+ PD+YTF  V+  CS+     
Sbjct: 72  -PGTYLWNHLIKGYSNKFLFFETVSILMRMM---RTGLARPDEYTFPLVMKVCSNNGQVR 127

Query: 581 CGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYA 760
            G ++HGL+++IG + D+ VG S V+FY     +  A K+F  MP+R+ ++WT+L+  Y 
Sbjct: 128 VGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYV 187

Query: 761 KSG 769
           KSG
Sbjct: 188 KSG 190


>ref|XP_006430120.1| hypothetical protein CICLE_v10011370mg [Citrus clementina]
           gi|557532177|gb|ESR43360.1| hypothetical protein
           CICLE_v10011370mg [Citrus clementina]
          Length = 574

 Score =  119 bits (297), Expect = 2e-24
 Identities = 75/223 (33%), Positives = 122/223 (54%), Gaps = 9/223 (4%)
 Frame = +2

Query: 128 LPKPIKIQTPVFLSSSSTTFPAISI--------PNNPISQLSHLLKQHPNPSQINQIHSQ 283
           +PK  +  TP    S S+  P  S         P+  +S L+ L+K+    + ++Q+HS 
Sbjct: 1   MPKIDEPNTPCKHKSCSSMLPNCSRSAPINFPKPSCLLSALT-LIKKCKLQTHLHQVHSH 59

Query: 284 IITQTFSSNTSLIAALIRSYIS-SNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNS 460
           II +    + SL+A  I    S +    Y+  +F+   +  P+T LWN +++ YS+ S  
Sbjct: 60  IIKKGLDQDHSLVAHFISLCHSLATPLSYSSAVFNRIVN--PNTFLWNTLLKGYSQNSRF 117

Query: 461 QESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFV 640
            E   +F +++       ++PDKYTF  VI ACSH LS   G  IH  +I+ G + D+FV
Sbjct: 118 IEVFTIFVRLIREE----AVPDKYTFPLVIKACSHVLSVREGTAIHAAVIRWGVDEDVFV 173

Query: 641 GNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
           G SL++ Y    ++  A K+FD MP+R+V++WT+++ GYA  G
Sbjct: 174 GTSLIDLYGKRKEISCARKVFDEMPERNVVSWTAMIVGYASVG 216


>ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513376|gb|AES94999.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 518

 Score =  119 bits (297), Expect = 2e-24
 Identities = 63/187 (33%), Positives = 111/187 (59%), Gaps = 2/187 (1%)
 Frame = +2

Query: 215 ISQLSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISS--NNFIYARILFDS 388
           + Q   LL++  N  ++ QIH Q++ +    +   ++ L+ +Y S   +N  YAR++FD 
Sbjct: 11  VEQTMSLLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDR 70

Query: 389 FPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQ 568
             S  P+T++WN +I+AYS +++ +E+L L++QML  + P     + YTF F++ ACS  
Sbjct: 71  ISS--PNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPH----NAYTFPFLLKACSAL 124

Query: 569 LSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLL 748
            +      IH  IIK G  S+++  NSL+  Y++   +  AH +FD +P RD+++W +++
Sbjct: 125 SALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMI 184

Query: 749 RGYAKSG 769
            GY K G
Sbjct: 185 DGYIKCG 191



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 27/198 (13%)
 Frame = +2

Query: 257 SQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQ 436
           ++ +QIH QII + F S      +L+R Y  S +   A +LFD  PS     + WN +I 
Sbjct: 128 AETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPS--RDIVSWNTMID 185

Query: 437 AYSKTSNSQESLHLFYQM-----------------LALNRPTLSI----------PDKYT 535
            Y K  N + +  +F  M                   +++  L +          PDK T
Sbjct: 186 GYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKIT 245

Query: 536 FTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMP 715
            +  ++AC+   +   G+ IH  I K   + D  +G +L++ Y    +M +A  +F  + 
Sbjct: 246 LSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLE 305

Query: 716 QRDVITWTSLLRGYAKSG 769
           ++ V TWT+++ G+A  G
Sbjct: 306 KKCVYTWTAIIGGFAVHG 323


>ref|XP_007027873.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508716478|gb|EOY08375.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 598

 Score =  118 bits (296), Expect = 2e-24
 Identities = 68/199 (34%), Positives = 112/199 (56%), Gaps = 4/199 (2%)
 Frame = +2

Query: 185 FPAISIPN----NPISQLSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISS 352
           FP + +P+    N +  L  LL+     +Q++QIH+ II +    +  LI   +     S
Sbjct: 47  FPLMPVPHPHLLNTLPSLPTLLRSCKTQNQLHQIHAHIIKKGLQQDHILITLFLSL---S 103

Query: 353 NNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKY 532
            +  Y+  +F+      PST +WN +++ YS+ S+  ++L LF +M    +    +PDKY
Sbjct: 104 TSLSYSTSVFNYL--FHPSTCVWNSLLKGYSRNSSFLQTLSLFIRM----KRDGGLPDKY 157

Query: 533 TFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGM 712
           T++ VI ACS Q     G+ +HGL +K G + D+FVG SLV+FY    ++  A K+FD M
Sbjct: 158 TYSLVIKACSSQFKAWEGKMLHGLALKGGGKEDVFVGTSLVDFYGKIMEIFNARKVFDEM 217

Query: 713 PQRDVITWTSLLRGYAKSG 769
            +R+V++WT+L+ G    G
Sbjct: 218 SERNVVSWTALVAGCINVG 236


>ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  118 bits (296), Expect = 2e-24
 Identities = 73/214 (34%), Positives = 111/214 (51%), Gaps = 35/214 (16%)
 Frame = +2

Query: 233 LLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYI---SSNNFIYARILFDSFPSCP 403
           LL+     +QI QIH+ II  +   N  ++A L+R      S+N+ +YAR +FD  PS  
Sbjct: 9   LLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPS-- 66

Query: 404 PSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIP-DKYTFTFVITACSHQLSPI 580
           P T +WN +I+AY  + N QES+ LF+QM    R    IP D Y+ + VI AC     P 
Sbjct: 67  PDTFIWNTMIRAYLNSQNPQESMSLFFQM----RHQECIPIDSYSLSLVIQACGRLKDPG 122

Query: 581 CGENIHGLIIKIGCESDIFVGNSLVNFYSVF----------------------------A 676
            G+ +H  ++KIG  SD+FV  +L+  Y+ F                             
Sbjct: 123 NGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYV 182

Query: 677 KMGE---AHKIFDGMPQRDVITWTSLLRGYAKSG 769
           ++GE   AH +FD MP+RD+++W +++ G+A  G
Sbjct: 183 RVGEINLAHDLFDRMPERDLVSWNTMIHGHASLG 216



 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 8/203 (3%)
 Frame = +2

Query: 185 FPAISIPNNPISQLSH--------LLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRS 340
           F  I I  N + +++H        LL ++    +IN  H  +  +    +      +I  
Sbjct: 153 FGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHD-LFDRMPERDLVSWNTMIHG 211

Query: 341 YISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSI 520
           + S  +   A+ LFD   +C    I W+ +I AY+K   S E+L LF++M   N     +
Sbjct: 212 HASLGDVGTAKKLFDR--TCERDLISWSSMIAAYAKARQSNEALRLFHEMQLAN----VL 265

Query: 521 PDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKI 700
           PDK T   V++AC    +   G+ IH  I +   E D+ +G SLV+ Y+    +  + ++
Sbjct: 266 PDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRV 325

Query: 701 FDGMPQRDVITWTSLLRGYAKSG 769
           F+GM  RDV  W++++ G A  G
Sbjct: 326 FNGMNNRDVFAWSAMIMGLANHG 348


>ref|XP_002870540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297316376|gb|EFH46799.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 547

 Score =  118 bits (296), Expect = 2e-24
 Identities = 65/182 (35%), Positives = 104/182 (57%)
 Frame = +2

Query: 224 LSHLLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCP 403
           L  LLK   +   +NQIH++II +    + +LI+  I S  SS++  Y+  +F+  P   
Sbjct: 13  LETLLKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISS--SSSSLSYSSSVFERVPY-- 68

Query: 404 PSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPIC 583
           P T LWN +I+ YS      E++ L  +M+   R   + PD+YTF  V+  CS+      
Sbjct: 69  PGTYLWNHLIKGYSNKFLFFETVSLLMRMM---RTGFARPDEYTFPLVMKVCSNNAEFRV 125

Query: 584 GENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAK 763
           G  +HGL+++IG + D+ +G S V+FY     +  A K+F  MP+R+V++WT+L+  Y K
Sbjct: 126 GSTVHGLVLRIGFDKDVVLGTSFVDFYGKCKDLCSARKVFGEMPERNVVSWTALIVAYVK 185

Query: 764 SG 769
           SG
Sbjct: 186 SG 187


>emb|CBI41082.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score =  118 bits (295), Expect = 3e-24
 Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 7/186 (3%)
 Frame = +2

Query: 233 LLKQHPNPSQINQIHSQIITQTFSSNTSLIAALIRSYI---SSNNFIYARILFDSFPSCP 403
           LL+     +QI QIH+ II  +   N  ++A L+R      S+N+ +YAR +FD  PS  
Sbjct: 3   LLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPS-- 60

Query: 404 PSTILWNQIIQAYSKTSNSQESLHLFYQMLALNRPTLSIP-DKYTFTFVITACSHQLSPI 580
           P T +WN +I+AY  + N QES+ LF+QM    R    IP D Y+ + VI AC     P 
Sbjct: 61  PDTFIWNTMIRAYLNSQNPQESMSLFFQM----RHQECIPIDSYSLSLVIQACGRLKDPG 116

Query: 581 CGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQ---RDVITWTSLLR 751
            G+ +H  ++KIG  SD+FV  +L+  Y+ F  +  A  I D M     RD+++W +++ 
Sbjct: 117 NGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLRDLVSWNTMIH 176

Query: 752 GYAKSG 769
           G+A  G
Sbjct: 177 GHASLG 182



 Score = 60.1 bits (144), Expect(2) = 4e-08
 Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
 Frame = +2

Query: 251 NPSQINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTIL-WNQ 427
           +P    ++H+Q++     S+  +  ALI  Y    +   AR + D         ++ WN 
Sbjct: 114 DPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLRDLVSWNT 173

Query: 428 IIQAYSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLI 607
           +I  ++   +S E+L LF++M   N     +PDK T   V++AC    +   G+ IH  I
Sbjct: 174 MIHGHASLGDSNEALRLFHEMQLAN----VLPDKVTMVSVLSACGDVGALGMGKMIHECI 229

Query: 608 IKIGCESDIFVGNSLVNFYSVFAKMGE 688
            +   E D+ +G SLV+ Y   AK G+
Sbjct: 230 ERNRIEIDLKLGTSLVDMY---AKCGD 253



 Score = 24.3 bits (51), Expect(2) = 4e-08
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 114 KALLSFQNPSKFKLLSFSPRHQPLFP 191
           +A L+ QNP +   L F  RHQ   P
Sbjct: 71  RAYLNSQNPQESMSLFFQMRHQECIP 96


>ref|XP_004289268.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Fragaria vesca subsp. vesca]
          Length = 794

 Score =  117 bits (294), Expect = 3e-24
 Identities = 60/167 (35%), Positives = 97/167 (58%)
 Frame = +2

Query: 269 QIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSK 448
           +IH+QI+T  F  +  L   L+ SY  S   +YAR +FD+ P    S++ W+ ++  Y+K
Sbjct: 68  RIHAQILTSGFRQDVFLANLLLDSYKKSGYIVYARNVFDTMPD--RSSVTWSSMVSMYTK 125

Query: 449 TSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628
              S+E+L +F +    +R +   P++YTF  VI AC+       G  +H  ++K G + 
Sbjct: 126 HGKSEEALKVFSEF---HRSSDGRPNEYTFPSVIRACTQFGGVDQGSQVHCFVVKTGFDK 182

Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
           ++FVG SL++FY     + EA  IFDG+  +  +TWT ++ GYAKSG
Sbjct: 183 EVFVGTSLIDFYVKMGDIEEARLIFDGLEVKSAVTWTIVIAGYAKSG 229



 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 54/169 (31%), Positives = 93/169 (55%)
 Frame = +2

Query: 260 QINQIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQA 439
           Q +Q+H  ++   F     +  +LI  Y+   +   AR++FD       S + W  +I  
Sbjct: 167 QGSQVHCFVVKTGFDKEVFVGTSLIDFYVKMGDIEEARLIFDGLEV--KSAVTWTIVIAG 224

Query: 440 YSKTSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIG 619
           Y+K+  S+ +L LFYQM    R T  +PDKY  + ++TACS       G+ IH  +++ G
Sbjct: 225 YAKSGKSEAALKLFYQM----RDT-DVPDKYVLSALLTACSALKFIGGGKQIHAYVLRRG 279

Query: 620 CESDIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAKS 766
            E D+ V N L++FY+   ++    K+FD +  RD+I+WT+++ GY ++
Sbjct: 280 TEMDVSVVNVLIDFYTKCGQVLAGQKLFDKVVDRDLISWTTMIAGYMQN 328



 Score = 90.1 bits (222), Expect = 8e-16
 Identities = 52/149 (34%), Positives = 82/149 (55%)
 Frame = +2

Query: 323 AALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALN 502
           +ALI  Y   +    A+++F+         ++WN +   Y++   S+E+L L Y  L L+
Sbjct: 490 SALIDVYSKCSCTREAKLVFEEMNE--KDIVVWNAMFSGYAQQQESEEALKL-YSKLQLS 546

Query: 503 RPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKM 682
           R    IP+++TF  V++A S   S   G+  H  IIK+G E+D FV N+LV+ YS    +
Sbjct: 547 R---QIPNEFTFASVVSAASSLASVQHGQQFHSQIIKVGLENDPFVTNALVDMYSKCGSI 603

Query: 683 GEAHKIFDGMPQRDVITWTSLLRGYAKSG 769
            EAHK+FD    +DV  W +++  YA  G
Sbjct: 604 EEAHKLFDSKTLKDVACWNTIISTYAHHG 632



 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 40/165 (24%), Positives = 79/165 (47%)
 Frame = +2

Query: 269 QIHSQIITQTFSSNTSLIAALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSK 448
           QIH+ ++ +    + S++  LI  Y      +  + LFD         I W  +I  Y +
Sbjct: 270 QIHAYVLRRGTEMDVSVVNVLIDFYTKCGQVLAGQKLFDKVVD--RDLISWTTMIAGYMQ 327

Query: 449 TSNSQESLHLFYQMLALNRPTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCES 628
            S   E++ LF +M  L       PD Y  + ++T+C    +   G  +H   I++    
Sbjct: 328 NSMHVEAVKLFSEMTRLGWR----PDGYGCSSILTSCGSLEALKHGREVHAYTIRVDLVY 383

Query: 629 DIFVGNSLVNFYSVFAKMGEAHKIFDGMPQRDVITWTSLLRGYAK 763
           + +V NSL++ Y+    + +A  +FD M   +V+++ +++ GY++
Sbjct: 384 EYYVKNSLIDMYAKCDSLTDARTVFDSMTDHNVVSYNAMIEGYSR 428



 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 42/146 (28%), Positives = 74/146 (50%)
 Frame = +2

Query: 326 ALIRSYISSNNFIYARILFDSFPSCPPSTILWNQIIQAYSKTSNSQESLHLFYQMLALNR 505
           +LI  Y   ++   AR +FDS      + + +N +I+ YS+     E+L LF  M    R
Sbjct: 390 SLIDMYAKCDSLTDARTVFDSMTD--HNVVSYNAMIEGYSRQDKLAEALDLFNLM----R 443

Query: 506 PTLSIPDKYTFTFVITACSHQLSPICGENIHGLIIKIGCESDIFVGNSLVNFYSVFAKMG 685
                P   TF  ++   +  L+    + +HG+  K G   DIF G++L++ YS  +   
Sbjct: 444 LRSVQPSILTFVSLLGVSAASLTLELSKQVHGMTTKYGLCLDIFAGSALIDVYSKCSCTR 503

Query: 686 EAHKIFDGMPQRDVITWTSLLRGYAK 763
           EA  +F+ M ++D++ W ++  GYA+
Sbjct: 504 EAKLVFEEMNEKDIVVWNAMFSGYAQ 529


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