BLASTX nr result

ID: Akebia25_contig00019689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00019689
         (445 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004287146.1| PREDICTED: translation initiation factor IF-...    49   1e-07
ref|XP_006404903.1| hypothetical protein EUTSA_v10000269mg [Eutr...    49   5e-07

>ref|XP_004287146.1| PREDICTED: translation initiation factor IF-3-like [Fragaria vesca
           subsp. vesca]
          Length = 275

 Score = 48.9 bits (115), Expect(2) = 1e-07
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = -2

Query: 111 VGVVSKGEAIQMAEDAELDLVILSPDADRDGARI 10
           VGVVSK EAI+MA++A+LDLVILSPDAD    RI
Sbjct: 106 VGVVSKSEAIRMADEADLDLVILSPDADPPVLRI 139



 Score = 32.3 bits (72), Expect(2) = 1e-07
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = -3

Query: 368 SSSFLLKPLLSRRITPL---LESELCGVRLSNPNFHKFNSCSFGSSISLTSITAXXXXXX 198
           ++SF  KP+LS+  TP      S+L G+R ++      +SCS  SS ++TS         
Sbjct: 5   TTSFASKPILSKT-TPFHSSFSSKLFGLRFNHVYLINSSSCSSLSSSAITSPVTARFGGG 63

Query: 197 XXXXXXXXXSETRKTEFKVDPALDISSIR 111
                       +      D ALDISSIR
Sbjct: 64  GPRRSSNDRRRQQSDAEDDDKALDISSIR 92


>ref|XP_006404903.1| hypothetical protein EUTSA_v10000269mg [Eutrema salsugineum]
           gi|557106031|gb|ESQ46356.1| hypothetical protein
           EUTSA_v10000269mg [Eutrema salsugineum]
          Length = 298

 Score = 48.9 bits (115), Expect(2) = 5e-07
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = -2

Query: 111 VGVVSKGEAIQMAEDAELDLVILSPDAD 28
           +G+VSK EA++MAEDAELDLVILSPDAD
Sbjct: 111 LGLVSKDEAVRMAEDAELDLVILSPDAD 138



 Score = 30.4 bits (67), Expect(2) = 5e-07
 Identities = 22/69 (31%), Positives = 31/69 (44%)
 Frame = -3

Query: 317 LESELCGVRLSNPNFHKFNSCSFGSSISLTSITAXXXXXXXXXXXXXXXSETRKTEFKVD 138
           ++S+LCG+R+S       NS   G  +++T                      R  E +VD
Sbjct: 31  IDSKLCGLRVSKAEHSIANSPRHG--LAVTCRYGGGGGGGGGYRFSGDSRRVRPKESEVD 88

Query: 137 PALDISSIR 111
            ALDISSIR
Sbjct: 89  DALDISSIR 97


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