BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00019626
         (1960 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40014.3| unnamed protein product [Vitis vinifera]              632   e-178
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   631   e-178
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...   610   e-172
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...   608   e-171
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]     606   e-170
ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cac...   603   e-169
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   593   e-166
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-...   578   e-162
ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trich...   573   e-160
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-...   572   e-160
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-...   572   e-160
ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [A...   570   e-159
gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Mimulus...   561   e-157
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-...   553   e-154
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-...   552   e-154
ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Caps...   550   e-154
ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-...   548   e-153
ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Popu...   539   e-150
ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutr...   537   e-150
ref|XP_002889701.1| hypothetical protein ARALYDRAFT_470915 [Arab...   536   e-149

>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  632 bits (1629), Expect = e-178
 Identities = 350/577 (60%), Positives = 406/577 (70%), Gaps = 1/577 (0%)
 Frame = -1

Query: 1876 MACLLPQFKCPPDTLSTLFRTHTNQLKTREPACSGAQCVLSXXXXXXXXXXT-VVDLEKL 1700
            M+CLLPQFKCPPDT ST  + H    K RE      QC LS          T V+D+EKL
Sbjct: 1    MSCLLPQFKCPPDTFSTHPKLHILS-KNREAIYFRVQCALSTTSPPLSTSTTAVLDIEKL 59

Query: 1699 QLHSLEANSNTVVADRPLTYVGAVGPPTKANFEATLAIEALLTGXXXXXXXXXXXXXXXX 1520
            +L SLE++SN+V A RP TY+G VGPPT+ANFEATLA E LLT                 
Sbjct: 60   RLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAAAEAVALA 119

Query: 1519 XXXXXXAQDAALMVGYNPSSKSSSIPLDFPSETDILRLEGDQLTEIERGRTIGQYPIGAK 1340
                  A+DAA +VG N S+KS + P  F S  D  +    Q TE ER   +G   +GA+
Sbjct: 120  KAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILGD-SVGAE 178

Query: 1339 TKKDEEHLMQFSLKNSENLDPTDDELKIEQMYLSTSIDVXXXXXXXXXXXXXXXXXXXXX 1160
            T   + + +Q   ++S++L+PT +EL++ +   S SI V                     
Sbjct: 179  TGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASA 238

Query: 1159 XXXXXXXXXXXXXXXXXLQEVDYSDPLHYXXXXXXXXXXXXXXXXXXXXXGIQDLLKLEK 980
                             LQEVDYSDPL Y                     GIQDLLKLEK
Sbjct: 239  GVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEK 298

Query: 979  IHEELAERCGGEPTFSQWAAAAGVDQKTLRKRINYGMLCKDKMVKSNIRLVISIAKKYQG 800
            + E+L ER G +PTF+QWAAAAGVDQKTLR+R NYG+ CKDKM+KSNIRLVISIAK YQG
Sbjct: 299  LQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQG 358

Query: 799  AGMTLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIRQAVRKSLSEQSRTIRLPFHM 620
            AGM +QDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWI+QAVRKSLS+QSRTIRLPFHM
Sbjct: 359  AGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHM 418

Query: 619  VEATYRVKEARKQLYSENGRYPDIKEVAAATGLTMKRLMAVQLTPKPPRSLDQKIGINQN 440
            VEATYRVKEARKQLYSENGR+P+ +EVA ATGL+MKRL AV LTPK PRSLDQKIGINQN
Sbjct: 419  VEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQN 478

Query: 439  LKPMEIIADPEAETAEDLLMKQFMRQDLEKVLDSLNPREKKVVRWRFGLEDGRMKTLQEI 260
            LKP E+IADP+AETAE+LL+KQFMR+DLEKVL+SLNPREK+V+RWR+GLEDGR KTLQEI
Sbjct: 479  LKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEI 538

Query: 259  GELMGVSRERVRQIESCAFRKLKNKRRTKHLQQYVVS 149
            GELMGVSRER+RQIESCAFRKLKNKRRTKHLQQY+VS
Sbjct: 539  GELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLVS 575


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  631 bits (1628), Expect = e-178
 Identities = 350/579 (60%), Positives = 406/579 (70%), Gaps = 3/579 (0%)
 Frame = -1

Query: 1876 MACLLPQFKCPPDTLSTLFRTHT--NQLKTREPACSGAQCVLSXXXXXXXXXXT-VVDLE 1706
            M+CLLPQFKCPPDT ST  + H      K RE      QC LS          T V+D+E
Sbjct: 1    MSCLLPQFKCPPDTFSTHPKLHILCKSPKNREAIYFRVQCALSTTSPPLSTSTTAVLDIE 60

Query: 1705 KLQLHSLEANSNTVVADRPLTYVGAVGPPTKANFEATLAIEALLTGXXXXXXXXXXXXXX 1526
            KL+L SLE++SN+V A RP TY+G VGPPT+ANFEATLA E LLT               
Sbjct: 61   KLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAAAEAVA 120

Query: 1525 XXXXXXXXAQDAALMVGYNPSSKSSSIPLDFPSETDILRLEGDQLTEIERGRTIGQYPIG 1346
                    A+DAA +VG N S+KS + P  F S  D  +    Q TE ER   +G   +G
Sbjct: 121  LAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILGD-SVG 179

Query: 1345 AKTKKDEEHLMQFSLKNSENLDPTDDELKIEQMYLSTSIDVXXXXXXXXXXXXXXXXXXX 1166
            A+T   + + +Q   ++S++L+PT +EL++ +   S SI V                   
Sbjct: 180  AETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKA 239

Query: 1165 XXXXXXXXXXXXXXXXXXXLQEVDYSDPLHYXXXXXXXXXXXXXXXXXXXXXGIQDLLKL 986
                               LQEVDYSDPL Y                     GIQDLLKL
Sbjct: 240  SAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKL 299

Query: 985  EKIHEELAERCGGEPTFSQWAAAAGVDQKTLRKRINYGMLCKDKMVKSNIRLVISIAKKY 806
            EK+ E+L ER G +PTF+QWAAAAGVDQKTLR+R NYG+ CKDKM+KSNIRLVISIAK Y
Sbjct: 300  EKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNY 359

Query: 805  QGAGMTLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIRQAVRKSLSEQSRTIRLPF 626
            QGAGM +QDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWI+QAVRKSLS+QSRTIRLPF
Sbjct: 360  QGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPF 419

Query: 625  HMVEATYRVKEARKQLYSENGRYPDIKEVAAATGLTMKRLMAVQLTPKPPRSLDQKIGIN 446
            HMVEATYRVKEARKQLYSENGR+P+ +EVA ATGL+MKRL AV LTPK PRSLDQKIGIN
Sbjct: 420  HMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGIN 479

Query: 445  QNLKPMEIIADPEAETAEDLLMKQFMRQDLEKVLDSLNPREKKVVRWRFGLEDGRMKTLQ 266
            QNLKP E+IADP+AETAE+LL+KQFMR+DLEKVL+SLNPREK+V+RWR+GLEDGR KTLQ
Sbjct: 480  QNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQ 539

Query: 265  EIGELMGVSRERVRQIESCAFRKLKNKRRTKHLQQYVVS 149
            EIGELMGVSRER+RQIESCAFRKLKNKRRTKHLQQY+VS
Sbjct: 540  EIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLVS 578


>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
            sinensis]
          Length = 605

 Score =  610 bits (1572), Expect = e-172
 Identities = 345/587 (58%), Positives = 401/587 (68%), Gaps = 9/587 (1%)
 Frame = -1

Query: 1882 KRMACLLPQFKCPPDTLSTLFRT-HTNQ------LKTREPACSGAQCVLSXXXXXXXXXX 1724
            K M+CLLPQFKC PDT S  FRT H +Q       K++EP C    CVLS          
Sbjct: 22   KNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTSTAM 81

Query: 1723 T-VVDLEKLQLHSLEANSNTVVADRPLTYVGAVGPPTKANFEATLAIEALLTGXXXXXXX 1547
            T V+D+EKL+L SLEA+SN V A+R  TY GAVGP T+ N   +LA E L T        
Sbjct: 82   TTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIAA 140

Query: 1546 XXXXXXXXXXXXXXXAQDAALMVGYNPSSKSSSIP-LDFPSETDILRLEGDQLTEIERGR 1370
                           A+DAALMV ++ S+K  S P +   ++T+       QLTE ER  
Sbjct: 141  ASAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTNTSMWA--QLTERERAS 198

Query: 1369 TIGQYPIGAKTKKDEEHLMQFSLKNSENLDPTDDELKIEQMYLSTSIDVXXXXXXXXXXX 1190
             IG   I  +   +EE+  Q  L  S +L+PT +ELK+ +  +S SI V           
Sbjct: 199  IIGDSVI-VEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKAR 257

Query: 1189 XXXXXXXXXXXXXXXXXXXXXXXXXXXLQEVDYSDPLHYXXXXXXXXXXXXXXXXXXXXX 1010
                                       +QEVDYSDPL Y                     
Sbjct: 258  RTRAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSA 317

Query: 1009 GIQDLLKLEKIHEELAERCGGEPTFSQWAAAAGVDQKTLRKRINYGMLCKDKMVKSNIRL 830
            GIQDLLKLE + E L+ERCGG PTF+QWAAAAGVDQ+ LR+R+NYG+LCKDKM+ SNIRL
Sbjct: 318  GIQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRL 377

Query: 829  VISIAKKYQGAGMTLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIRQAVRKSLSEQ 650
            VISIAK YQGAGM LQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWI+QAVRKSLS+Q
Sbjct: 378  VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQ 437

Query: 649  SRTIRLPFHMVEATYRVKEARKQLYSENGRYPDIKEVAAATGLTMKRLMAVQLTPKPPRS 470
            SRTIRLPFHMVEATYRVKEARKQLYSENGR+P+ +EVA ATGL+MKRL AV LTPK PRS
Sbjct: 438  SRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPRS 497

Query: 469  LDQKIGINQNLKPMEIIADPEAETAEDLLMKQFMRQDLEKVLDSLNPREKKVVRWRFGLE 290
            LDQK GINQNLKP E+IADPEAETAEDLL+K+FM++DLEKVLD+LNPRE++VVRWRFGLE
Sbjct: 498  LDQKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLE 557

Query: 289  DGRMKTLQEIGELMGVSRERVRQIESCAFRKLKNKRRTKHLQQYVVS 149
            DGRMKTLQEIGELMGVSRER+RQIES AFRKLKNK+RTKHL QY ++
Sbjct: 558  DGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAIT 604


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
            gi|557539534|gb|ESR50578.1| hypothetical protein
            CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score =  608 bits (1567), Expect = e-171
 Identities = 344/586 (58%), Positives = 396/586 (67%), Gaps = 8/586 (1%)
 Frame = -1

Query: 1882 KRMACLLPQFKCPPDTLSTLFRT-HTNQ------LKTREPACSGAQCVLSXXXXXXXXXX 1724
            K M+CLLPQFKC PDT S  FRT H +Q       K++EP C    CVLS          
Sbjct: 22   KNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTSTAM 81

Query: 1723 T-VVDLEKLQLHSLEANSNTVVADRPLTYVGAVGPPTKANFEATLAIEALLTGXXXXXXX 1547
            T V+D+EKL+L SLEA+SN V A+R  TY GAVGP T+ N   +LA E L T        
Sbjct: 82   TTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIAA 140

Query: 1546 XXXXXXXXXXXXXXXAQDAALMVGYNPSSKSSSIPLDFPSETDILRLEGDQLTEIERGRT 1367
                           A+DAALMV ++ S+K  S P       D       QLTE ER   
Sbjct: 141  ASAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPA-ISLSADTSTSMWAQLTERERASI 199

Query: 1366 IGQYPIGAKTKKDEEHLMQFSLKNSENLDPTDDELKIEQMYLSTSIDVXXXXXXXXXXXX 1187
            IG   I  +   +EE+  Q  L  S +L+PT +ELK+ +  +S SI V            
Sbjct: 200  IGDSVI-VEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARR 258

Query: 1186 XXXXXXXXXXXXXXXXXXXXXXXXXXLQEVDYSDPLHYXXXXXXXXXXXXXXXXXXXXXG 1007
                                      +QEVDYSDPL Y                     G
Sbjct: 259  TRAAEKAAANVMSVKSGSTTRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAG 318

Query: 1006 IQDLLKLEKIHEELAERCGGEPTFSQWAAAAGVDQKTLRKRINYGMLCKDKMVKSNIRLV 827
            IQDLLKLE + E L+ERCGG PTF+QWAAAAGVDQ+ LR+R+NYG+LCKDKM+ SNIRLV
Sbjct: 319  IQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLV 378

Query: 826  ISIAKKYQGAGMTLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIRQAVRKSLSEQS 647
            ISIAK YQGAGM LQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWI+QAVRKSLS+QS
Sbjct: 379  ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 438

Query: 646  RTIRLPFHMVEATYRVKEARKQLYSENGRYPDIKEVAAATGLTMKRLMAVQLTPKPPRSL 467
            RTIRLPFHMVEATYRVKEARKQLYSENGR+P+ +EVA ATGL+MKRL AV L PK PRSL
Sbjct: 439  RTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAKATGLSMKRLHAVLLAPKAPRSL 498

Query: 466  DQKIGINQNLKPMEIIADPEAETAEDLLMKQFMRQDLEKVLDSLNPREKKVVRWRFGLED 287
            DQK GINQNLKP E+IADPEAETAEDLL+K+FM++DLEKVLD+LNPRE++VVRWRFGLED
Sbjct: 499  DQKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLED 558

Query: 286  GRMKTLQEIGELMGVSRERVRQIESCAFRKLKNKRRTKHLQQYVVS 149
            GRMKTLQEIGELMGVSRER+RQIES AFRKLKNK+RTKHL QY ++
Sbjct: 559  GRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAIT 604


>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 574

 Score =  606 bits (1563), Expect = e-170
 Identities = 339/584 (58%), Positives = 394/584 (67%), Gaps = 8/584 (1%)
 Frame = -1

Query: 1876 MACLLPQFKCPPDTLSTLFRTHTNQLKTREPAC-------SGAQCVLSXXXXXXXXXXT- 1721
            M+CLLPQF C PDT S  F   T+ L T            S AQCVLS          T 
Sbjct: 1    MSCLLPQFNCKPDTFSAQFNFRTHSLPTPNSHLPKARDINSLAQCVLSTTSPSTSVGATY 60

Query: 1720 VVDLEKLQLHSLEANSNTVVADRPLTYVGAVGPPTKANFEATLAIEALLTGXXXXXXXXX 1541
            V+ +EKL+  SL+ANS +V ++RP TY GA GPP +ANFEATLA E LLT          
Sbjct: 61   VLSVEKLRFPSLDANSESVTSNRPWTYTGATGPPVEANFEATLATETLLTSEEAVIAAAA 120

Query: 1540 XXXXXXXXXXXXXAQDAALMVGYNPSSKSSSIPLDFPSETDILRLEGDQLTEIERGRTIG 1361
                         A+DAAL+V   PS+++ SI L      +I   +              
Sbjct: 121  AEAVTLAKAAVKVAKDAALLV--RPSTRAESISLVSSEARNIKTAQAASRVRDS------ 172

Query: 1360 QYPIGAKTKKDEEHLMQFSLKNSENLDPTDDELKIEQMYLSTSIDVXXXXXXXXXXXXXX 1181
               + A+    E+H  + + K S +L PT++EL+I Q  LS SI V              
Sbjct: 173  ---LRAEMALIEDHPPKDAAKESNDLQPTNEELRILQEQLSKSIAVRSRRQSERKAKRDR 229

Query: 1180 XXXXXXXXXXXXXXXXXXXXXXXXLQEVDYSDPLHYXXXXXXXXXXXXXXXXXXXXXGIQ 1001
                                    +Q+VD+SDPL Y                     GIQ
Sbjct: 230  AAEKAAANVVAVKSGSNSRKKRASVQDVDHSDPLRYLRSTTSTSRLLTATEEIELSEGIQ 289

Query: 1000 DLLKLEKIHEELAERCGGEPTFSQWAAAAGVDQKTLRKRINYGMLCKDKMVKSNIRLVIS 821
            DLLKLEK+ EELAERCGG PTF+QWAAAAGVDQKTLR+RINYG+LCKDKM+KSN+RLVIS
Sbjct: 290  DLLKLEKLQEELAERCGGPPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNVRLVIS 349

Query: 820  IAKKYQGAGMTLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIRQAVRKSLSEQSRT 641
            IAK YQGAGM LQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWI+QAVRKSLS+QSRT
Sbjct: 350  IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 409

Query: 640  IRLPFHMVEATYRVKEARKQLYSENGRYPDIKEVAAATGLTMKRLMAVQLTPKPPRSLDQ 461
            IRLPFHMVEATYRVKEARKQLYSENGR P+ +EVA ATGL+MKRL AV LTPK PRSL+Q
Sbjct: 410  IRLPFHMVEATYRVKEARKQLYSENGRQPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQ 469

Query: 460  KIGINQNLKPMEIIADPEAETAEDLLMKQFMRQDLEKVLDSLNPREKKVVRWRFGLEDGR 281
            KIGINQNLKP EIIADP+AET ED+L +QFM+QDL+KVLDSLN REK+V+RWRFG++DGR
Sbjct: 470  KIGINQNLKPSEIIADPDAETLEDVLTRQFMKQDLDKVLDSLNQREKQVIRWRFGMDDGR 529

Query: 280  MKTLQEIGELMGVSRERVRQIESCAFRKLKNKRRTKHLQQYVVS 149
            MKTLQEIGELMGVSRER+RQIESCAFRKLKNK+RTKHLQQY++S
Sbjct: 530  MKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLIS 573


>ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
            gi|508718473|gb|EOY10370.1| RNApolymerase sigma subunit 2
            [Theobroma cacao]
          Length = 623

 Score =  603 bits (1554), Expect = e-169
 Identities = 346/623 (55%), Positives = 401/623 (64%), Gaps = 47/623 (7%)
 Frame = -1

Query: 1876 MACLLPQFKCPPDTLSTLFRTHTNQ----------------------------------- 1802
            M+CLLPQFKC PDT S  FRTH +                                    
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHFLIAVTGMVKYFSPRQCSCGNLTNPPKVSGLIFV 60

Query: 1801 --LKTREPACSGAQCVLSXXXXXXXXXXT-VVDLEKLQLHSLEANSNTVVADRPLTYVGA 1631
               K +E  C   QCVLS          T V+D+EKL+L S EA+ N+V  DRP TY+GA
Sbjct: 61   VLAKHKEHICFRTQCVLSTTSSSTSTTATAVLDVEKLRLPSFEAHPNSVAVDRPWTYIGA 120

Query: 1630 VGPPTKANFEATLAIEALLTGXXXXXXXXXXXXXXXXXXXXXXAQDAALMV-GYNPSSKS 1454
             GPP++A+  ATLA + LLT                       A+DAALM   YN +   
Sbjct: 121  TGPPSEASLGATLATDNLLTSDEAVIAAAAAEAVALARAAVKVAKDAALMAENYNYAKTE 180

Query: 1453 SSIPLDFPSETDILRLEGDQLTEIERGRTIGQYPIGAKTKKDEEHLMQFSLKNSENLDPT 1274
                + F   TD    +    TE ER   IG  P   +++ +E+   Q S   S+ L+PT
Sbjct: 181  MKSGVSFA--TDSFTSKWALFTEAERAGIIGDSPTD-ESEMEEDDSEQNSTTESDELEPT 237

Query: 1273 DDELKIEQMYLSTSIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQEVD 1094
            ++EL+  +  LS SI V                                      LQ+VD
Sbjct: 238  NEELEHLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRGALQDVD 297

Query: 1093 YSDPLHYXXXXXXXXXXXXXXXXXXXXXGIQDLLKLEKIHEELAERCGGEPTFSQWAAAA 914
            YSDPL Y                     GIQDLLKLE++ EELAERCGG+PTF+QWAAAA
Sbjct: 298  YSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAA 357

Query: 913  GVDQKTLRKRINYGMLCKDKMVKSNIRLVISIAKKYQGAGMTLQDLVQEGCRGLVKGAEK 734
            GVDQKTLR R+NYG+ CKDKM+KSNIRLVISIAK YQGAGM LQDLVQEGCRGLV+GAEK
Sbjct: 358  GVDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK 417

Query: 733  FDASKGFKFSTYAHWWIRQAVRKSLSEQSRTIRLPFHMVEATYRVKEARKQLYSENGRYP 554
            FDASKGFKFSTYAHWWI+QAVRKSLS+QSRTIRLPFHMVEATYRVKEARKQLYSENGR+P
Sbjct: 418  FDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHP 477

Query: 553  DIKEVAAATGLTMKRLMAVQLTPKPPRSLDQKIGINQNLKP--------MEIIADPEAET 398
            D +EVA ATGL+MKRL AV LTPK PRSLDQKIGINQNLKP         E+IADPEAET
Sbjct: 478  DNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSVCPVSSLAEVIADPEAET 537

Query: 397  AEDLLMKQFMRQDLEKVLDSLNPREKKVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQI 218
            AED+L+KQFMR+DLEKVLDSL+ RE++V+RWRFG+EDGRMKTLQEIGELMGVSRER+RQI
Sbjct: 538  AEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQI 597

Query: 217  ESCAFRKLKNKRRTKHLQQYVVS 149
            ESCAFRKLKNK+RTKHLQQY++S
Sbjct: 598  ESCAFRKLKNKKRTKHLQQYLLS 620


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  593 bits (1528), Expect = e-166
 Identities = 338/583 (57%), Positives = 391/583 (67%), Gaps = 7/583 (1%)
 Frame = -1

Query: 1876 MACLLPQFKCPPDTLSTLFRTH-------TNQLKTREPACSGAQCVLSXXXXXXXXXXTV 1718
            M+CLLPQFKC PDT S  FR +       T   K+REP    AQC+LS           V
Sbjct: 2    MSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCILSTTSPSTSTA--V 59

Query: 1717 VDLEKLQLHSLEANSNTVVADRPLTYVGAVGPPTKANFEATLAIEALLTGXXXXXXXXXX 1538
            +DLEKL+L S EA S+++  + P TY         A F +TLA E L+T           
Sbjct: 60   LDLEKLRLPSFEAPSDSIAPNSPWTY---------ATFGSTLATETLITSDEAVIAAAAA 110

Query: 1537 XXXXXXXXXXXXAQDAALMVGYNPSSKSSSIPLDFPSETDILRLEGDQLTEIERGRTIGQ 1358
                        A+DAAL+V   PS+++ S  L  PS  D  R    Q TE ER R IG 
Sbjct: 111  EAVALARAAVKVAKDAALLVKNFPSAETES-KLTSPSTIDASRWP--QFTETERARIIGD 167

Query: 1357 YPIGAKTKKDEEHLMQFSLKNSENLDPTDDELKIEQMYLSTSIDVXXXXXXXXXXXXXXX 1178
              +  +T   EE  MQ S+K S+ L+ T  EL++ Q  LS  I V               
Sbjct: 168  -SVATETGPREESSMQSSIKESDYLELTHKELELLQKQLSEGIAVRSRRQTERKARRARA 226

Query: 1177 XXXXXXXXXXXXXXXXXXXXXXXLQEVDYSDPLHYXXXXXXXXXXXXXXXXXXXXXGIQD 998
                                   LQEVDYSDPL Y                      IQD
Sbjct: 227  VEKAASSVVSVKPGSTSKKKRGSLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQD 286

Query: 997  LLKLEKIHEELAERCGGEPTFSQWAAAAGVDQKTLRKRINYGMLCKDKMVKSNIRLVISI 818
            LLKLE++ EELAER GG+PTF+QWAAAAGVDQ+TLRKRIN+G +CKDKM+KSNIRLVISI
Sbjct: 287  LLKLERLQEELAERYGGQPTFAQWAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISI 346

Query: 817  AKKYQGAGMTLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIRQAVRKSLSEQSRTI 638
            AK YQGAGM LQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWI+QAVRKSLS+QSRTI
Sbjct: 347  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 406

Query: 637  RLPFHMVEATYRVKEARKQLYSENGRYPDIKEVAAATGLTMKRLMAVQLTPKPPRSLDQK 458
            RLPFHMVEATYRVKEARKQLYSENGR+PD +EVA A GL+MKRL AV LTPK PRSLDQK
Sbjct: 407  RLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQK 466

Query: 457  IGINQNLKPMEIIADPEAETAEDLLMKQFMRQDLEKVLDSLNPREKKVVRWRFGLEDGRM 278
            IG+N +LKP E+IADPEAETAE+LLMKQFM+QDLEKVL++LNPRE +VVRWRFGLEDGRM
Sbjct: 467  IGMNMDLKPSEVIADPEAETAEELLMKQFMKQDLEKVLNTLNPRETQVVRWRFGLEDGRM 526

Query: 277  KTLQEIGELMGVSRERVRQIESCAFRKLKNKRRTKHLQQYVVS 149
            KTLQEIGE+MGVSRER+RQIES AFRKLKNK+RTK L+QY+++
Sbjct: 527  KTLQEIGEIMGVSRERIRQIESSAFRKLKNKKRTKQLKQYLLA 569


>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-like [Fragaria vesca
            subsp. vesca]
          Length = 616

 Score =  578 bits (1490), Expect = e-162
 Identities = 308/525 (58%), Positives = 372/525 (70%), Gaps = 1/525 (0%)
 Frame = -1

Query: 1720 VVDLEKLQLHSLEANSNTVVADRPLTYVGAVGPPTKANFEATLAIEALLTGXXXXXXXXX 1541
            ++D+E+  L SL  NS++++ +RP TY GA+GPPT+AN+ A LA E LLT          
Sbjct: 95   LLDMEEFSLPSLTVNSDSLIVNRPWTYTGAIGPPTEANYGAALATETLLTSEEAVIAAAA 154

Query: 1540 XXXXXXXXXXXXXAQDAALMVGYNPSSK-SSSIPLDFPSETDILRLEGDQLTEIERGRTI 1364
                         A+D AL+V  N  +K  +S P+     T    +   Q  E E    I
Sbjct: 155  AEAVTLAKAALKVAKDVALLVSNNHYAKVENSSPVS--CGTSAFHINWAQHLETEPTLRI 212

Query: 1363 GQYPIGAKTKKDEEHLMQFSLKNSENLDPTDDELKIEQMYLSTSIDVXXXXXXXXXXXXX 1184
            G   + ++T   E+H +Q ++  SEN++P ++E ++ Q  LS  I               
Sbjct: 213  GD-SMASETALVEDHFLQIAINESENVEPANEEFELLQEQLSNGIAARSSRQTERKARRT 271

Query: 1183 XXXXXXXXXXXXXXXXXXXXXXXXXLQEVDYSDPLHYXXXXXXXXXXXXXXXXXXXXXGI 1004
                                     LQ+VD+SDPL Y                     GI
Sbjct: 272  RAAEKAAASIVSVKSGSTSRKKRASLQDVDHSDPLRYLRATTHTSRLLTANEEIELSEGI 331

Query: 1003 QDLLKLEKIHEELAERCGGEPTFSQWAAAAGVDQKTLRKRINYGMLCKDKMVKSNIRLVI 824
            Q+LLKLEK+ E+LA+RCG +PTF+QWAAAAGVDQKTLRKR+NYG++CKDKM+KSNIRLVI
Sbjct: 332  QELLKLEKLQEDLAQRCGTQPTFAQWAAAAGVDQKTLRKRVNYGIMCKDKMIKSNIRLVI 391

Query: 823  SIAKKYQGAGMTLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIRQAVRKSLSEQSR 644
            SIAK YQGAGM LQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWI+QAVRKSLS+QSR
Sbjct: 392  SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 451

Query: 643  TIRLPFHMVEATYRVKEARKQLYSENGRYPDIKEVAAATGLTMKRLMAVQLTPKPPRSLD 464
            TIRLPFHMVEATYRV+EA+KQLYS NGR+P+ +EVA ATGL+MKRL AV LTPK PRSL+
Sbjct: 452  TIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLE 511

Query: 463  QKIGINQNLKPMEIIADPEAETAEDLLMKQFMRQDLEKVLDSLNPREKKVVRWRFGLEDG 284
            QKIGINQNLKP ++IADP+AETAEDLLMK+FM+QDLEKVLDSLNPREK+V+RWRFG+EDG
Sbjct: 512  QKIGINQNLKPSDVIADPDAETAEDLLMKKFMKQDLEKVLDSLNPREKQVIRWRFGMEDG 571

Query: 283  RMKTLQEIGELMGVSRERVRQIESCAFRKLKNKRRTKHLQQYVVS 149
            RMKTLQEIGELMGVSRER+RQIESCAFRKLKNK+RTKHLQQYV+S
Sbjct: 572  RMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVLS 616


>ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trichocarpa]
            gi|550325142|gb|EEE95669.2| SIGMA FACTOR B family protein
            [Populus trichocarpa]
          Length = 567

 Score =  573 bits (1476), Expect = e-160
 Identities = 327/579 (56%), Positives = 382/579 (65%), Gaps = 3/579 (0%)
 Frame = -1

Query: 1876 MACLLPQFKCPPDTLSTLFRT--HTNQLKTREPACSGAQCVLSXXXXXXXXXXTVVDLEK 1703
            M+CLLPQFKC PDT S  FR   H     T+ P     QCVLS           V+DLEK
Sbjct: 1    MSCLLPQFKCQPDTFSVHFRNLQHHGTNHTQLP-----QCVLSSASPSTA----VLDLEK 51

Query: 1702 LQLHSLEANSNTVVADRPLTYVGAVGPPTKANFEATLAIEALLTGXXXXXXXXXXXXXXX 1523
            L+L SLE +S+++ A+RP TY+G +GP  K  F  +LA E L+                 
Sbjct: 52   LRLPSLEPHSDSISANRPWTYIGGIGPQKKPPFGTSLAAETLIANDEAVIAAAAAEAVAL 111

Query: 1522 XXXXXXXAQDAALMV-GYNPSSKSSSIPLDFPSETDILRLEGDQLTEIERGRTIGQYPIG 1346
                   A+DAA M   Y+   K + IP+   S TD        LTE ER   IG   + 
Sbjct: 112  ARAAVKVAKDAAEMAKNYSFMKKETKIPI--ASTTDSFSSMWSLLTEKERADIIGD-SVS 168

Query: 1345 AKTKKDEEHLMQFSLKNSENLDPTDDELKIEQMYLSTSIDVXXXXXXXXXXXXXXXXXXX 1166
            A+T+  EE+ +Q+  +  + L+PT +EL + Q  LS  I V                   
Sbjct: 169  AETRLREEYSVQYPTEEYDCLEPTQEELALLQKQLSEGIAVRSKRQTERKARRARAAEKA 228

Query: 1165 XXXXXXXXXXXXXXXXXXXLQEVDYSDPLHYXXXXXXXXXXXXXXXXXXXXXGIQDLLKL 986
                               LQEVD SDPL +                     GIQDLLKL
Sbjct: 229  AANVVSVKSGSTSKKKRVPLQEVDQSDPLRFFRGASSSSRLLSATEEVELSEGIQDLLKL 288

Query: 985  EKIHEELAERCGGEPTFSQWAAAAGVDQKTLRKRINYGMLCKDKMVKSNIRLVISIAKKY 806
            E+I EEL ER GGEP+F+QWAAAAGVDQ TLRKR+NYG+LCKDKM+KSN+RLVISIAK Y
Sbjct: 289  ERIEEELKERFGGEPSFAQWAAAAGVDQLTLRKRLNYGILCKDKMIKSNVRLVISIAKNY 348

Query: 805  QGAGMTLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIRQAVRKSLSEQSRTIRLPF 626
            QG GM LQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWI+QAVRKSLS++SRTIRLPF
Sbjct: 349  QGTGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDRSRTIRLPF 408

Query: 625  HMVEATYRVKEARKQLYSENGRYPDIKEVAAATGLTMKRLMAVQLTPKPPRSLDQKIGIN 446
            HMV+ATYRVKEARKQLYSENGR+PD KEVA A GL+MKRL AV LTPK PRSLDQK+G N
Sbjct: 409  HMVDATYRVKEARKQLYSENGRHPDDKEVAEAAGLSMKRLSAVLLTPKAPRSLDQKMGFN 468

Query: 445  QNLKPMEIIADPEAETAEDLLMKQFMRQDLEKVLDSLNPREKKVVRWRFGLEDGRMKTLQ 266
             +LK  E+ ADPEAETAEDLLMK+FM++DL KVL SL+PRE +VVRWRFG+EDGRMKTLQ
Sbjct: 469  MDLKLSEVTADPEAETAEDLLMKEFMKKDLAKVLGSLSPRENQVVRWRFGMEDGRMKTLQ 528

Query: 265  EIGELMGVSRERVRQIESCAFRKLKNKRRTKHLQQYVVS 149
            EIGELMGVSRERVRQIE  AFRKLKNK RTK L+QY+V+
Sbjct: 529  EIGELMGVSRERVRQIELSAFRKLKNKNRTKQLRQYMVA 567


>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
            gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
            polymerase sigma factor sigB-like [Cucumis sativus]
          Length = 580

 Score =  572 bits (1475), Expect = e-160
 Identities = 321/591 (54%), Positives = 387/591 (65%), Gaps = 15/591 (2%)
 Frame = -1

Query: 1876 MACLLPQFKCPPDTLSTLFRTHTNQ--------------LKTREPACSGAQCVLSXXXXX 1739
            M+CLLPQFKC P+T S  F+T  N                K R+P     QC+LS     
Sbjct: 1    MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPP 60

Query: 1738 XXXXXTV-VDLEKLQLHSLEANSNTVVADRPLTYVGAVGPPTKANFEATLAIEALLTGXX 1562
                    +D+++L+L   + N+++V  +R  +Y+GAV        E++LA   LLT   
Sbjct: 61   TSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAV--------ESSLA-STLLTSEE 111

Query: 1561 XXXXXXXXXXXXXXXXXXXXAQDAALMVGYNPSSKSSSIPLDFPSETDILRLEGDQLTEI 1382
                                A+DAAL+     SS++ +     P + D L  +  Q  E 
Sbjct: 112  ASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSP-KPDALHFKWAQFMES 170

Query: 1381 ERGRTIGQYPIGAKTKKDEEHLMQFSLKNSENLDPTDDELKIEQMYLSTSIDVXXXXXXX 1202
            ER   IG+ P+G   +  E   ++ S   S++++PT +EL++ Q  LS SI V       
Sbjct: 171  ERADIIGE-PVGVNKRPMEGDALEPSTTESDDMEPTSEELELLQDELSESITVKSKRQTE 229

Query: 1201 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQEVDYSDPLHYXXXXXXXXXXXXXXXXX 1022
                                           +QEVDYSDPL Y                 
Sbjct: 230  RKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEEL 289

Query: 1021 XXXXGIQDLLKLEKIHEELAERCGGEPTFSQWAAAAGVDQKTLRKRINYGMLCKDKMVKS 842
                GIQDLLKLE++ EEL ER G EPTF+QWAAAAGV+Q+TLRKR+NYG LCKDKM+KS
Sbjct: 290  ELSEGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKS 349

Query: 841  NIRLVISIAKKYQGAGMTLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIRQAVRKS 662
            NIRLVISIAK YQGAGM LQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWI+QAVRK 
Sbjct: 350  NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKF 409

Query: 661  LSEQSRTIRLPFHMVEATYRVKEARKQLYSENGRYPDIKEVAAATGLTMKRLMAVQLTPK 482
            LS+QSRTIRLPFHMVEATYRVKEARKQL  ENGR+PD KE+A A GL+MKRL AV +TPK
Sbjct: 410  LSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPK 469

Query: 481  PPRSLDQKIGINQNLKPMEIIADPEAETAEDLLMKQFMRQDLEKVLDSLNPREKKVVRWR 302
             PRSL+QKIGINQNLKP E+I+DPEAET ED+L+KQFM+QDLEKVLDSLNPREK+V+RWR
Sbjct: 470  APRSLEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWR 529

Query: 301  FGLEDGRMKTLQEIGELMGVSRERVRQIESCAFRKLKNKRRTKHLQQYVVS 149
            FG+EDGRMKTLQEIGE+MGVSRER+RQIESCAFRKLKNK+RTKHLQQYV+S
Sbjct: 530  FGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS 580


>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
            sinensis]
          Length = 525

 Score =  572 bits (1474), Expect = e-160
 Identities = 317/525 (60%), Positives = 369/525 (70%), Gaps = 1/525 (0%)
 Frame = -1

Query: 1720 VVDLEKLQLHSLEANSNTVVADRPLTYVGAVGPPTKANFEATLAIEALLTGXXXXXXXXX 1541
            V+D+EKL+L SLEA+SN V A+R  TY GAVGP T+ N   +LA E L T          
Sbjct: 4    VLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIAAAS 62

Query: 1540 XXXXXXXXXXXXXAQDAALMVGYNPSSKSSSIP-LDFPSETDILRLEGDQLTEIERGRTI 1364
                         A+DAALMV ++ S+K  S P +   ++T+       QLTE ER   I
Sbjct: 63   AEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTNTSMWA--QLTERERASII 120

Query: 1363 GQYPIGAKTKKDEEHLMQFSLKNSENLDPTDDELKIEQMYLSTSIDVXXXXXXXXXXXXX 1184
            G   I  +   +EE+  Q  L  S +L+PT +ELK+ +  +S SI V             
Sbjct: 121  GDSVI-VEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRT 179

Query: 1183 XXXXXXXXXXXXXXXXXXXXXXXXXLQEVDYSDPLHYXXXXXXXXXXXXXXXXXXXXXGI 1004
                                     +QEVDYSDPL Y                     GI
Sbjct: 180  RAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGI 239

Query: 1003 QDLLKLEKIHEELAERCGGEPTFSQWAAAAGVDQKTLRKRINYGMLCKDKMVKSNIRLVI 824
            QDLLKLE + E L+ERCGG PTF+QWAAAAGVDQ+ LR+R+NYG+LCKDKM+ SNIRLVI
Sbjct: 240  QDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVI 299

Query: 823  SIAKKYQGAGMTLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIRQAVRKSLSEQSR 644
            SIAK YQGAGM LQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWI+QAVRKSLS+QSR
Sbjct: 300  SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 359

Query: 643  TIRLPFHMVEATYRVKEARKQLYSENGRYPDIKEVAAATGLTMKRLMAVQLTPKPPRSLD 464
            TIRLPFHMVEATYRVKEARKQLYSENGR+P+ +EVA ATGL+MKRL AV LTPK PRSLD
Sbjct: 360  TIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPRSLD 419

Query: 463  QKIGINQNLKPMEIIADPEAETAEDLLMKQFMRQDLEKVLDSLNPREKKVVRWRFGLEDG 284
            QK GINQNLKP E+IADPEAETAEDLL+K+FM++DLEKVLD+LNPRE++VVRWRFGLEDG
Sbjct: 420  QKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDG 479

Query: 283  RMKTLQEIGELMGVSRERVRQIESCAFRKLKNKRRTKHLQQYVVS 149
            RMKTLQEIGELMGVSRER+RQIES AFRKLKNK+RTKHL QY ++
Sbjct: 480  RMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAIT 524


>ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
            gi|548831956|gb|ERM94758.1| hypothetical protein
            AMTR_s00011p00258380 [Amborella trichopoda]
          Length = 570

 Score =  570 bits (1468), Expect = e-159
 Identities = 315/552 (57%), Positives = 374/552 (67%), Gaps = 1/552 (0%)
 Frame = -1

Query: 1801 LKTREPACSGAQCVLSXXXXXXXXXXTVVDLEKLQLHSLEANSNTVVADRPLTYVGAVGP 1622
            ++TRE  C   QCV S           VVD++K+++ SL  +S +V    PLTYVG +G 
Sbjct: 26   VRTREATCFQTQCVSSTATV-------VVDVDKVRVPSLGGHSTSVSTHGPLTYVGTIGS 78

Query: 1621 PTKANFEATLAIEALLTGXXXXXXXXXXXXXXXXXXXXXXAQDAALMVGYNPSSKSSSIP 1442
              K +FEA L  E+LL                        A+DAALMVG  P S+S  + 
Sbjct: 79   QKKTDFEAALVTESLLKSEEAIIAAAAAEAIALAKAAAKLAKDAALMVGSVPPSRSDKVD 138

Query: 1441 LDFPSETDILRLEGDQLTEIER-GRTIGQYPIGAKTKKDEEHLMQFSLKNSENLDPTDDE 1265
             DFPSE DILRL+  +LTE+ER G   G    G   +   + + Q S     +    ++ 
Sbjct: 139  -DFPSEADILRLQRARLTEMERIGSMDGSSIAGIGPRDKHKSVNQLSPNEMADKQSRENI 197

Query: 1264 LKIEQMYLSTSIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQEVDYSD 1085
            L+  Q+  S  + V                                      LQE+DYSD
Sbjct: 198  LEALQLQHSQRVAVRSRRQTERRARRAKGVEKAAANAITVKLGTTSRRKRAPLQEIDYSD 257

Query: 1084 PLHYXXXXXXXXXXXXXXXXXXXXXGIQDLLKLEKIHEELAERCGGEPTFSQWAAAAGVD 905
            PL Y                     GIQDLLKLEK+H+EL ER GGEPTF QWAAAAG+D
Sbjct: 258  PLRYLRGTTNSTKLLTATEELELSEGIQDLLKLEKLHKELTERFGGEPTFVQWAAAAGID 317

Query: 904  QKTLRKRINYGMLCKDKMVKSNIRLVISIAKKYQGAGMTLQDLVQEGCRGLVKGAEKFDA 725
            QK LR+R++YG  CKDKM+KSNIRLVISIAK YQG G+++QDLVQEGCRGLV+GAEKFDA
Sbjct: 318  QKALRRRLSYGTHCKDKMIKSNIRLVISIAKNYQGVGLSIQDLVQEGCRGLVRGAEKFDA 377

Query: 724  SKGFKFSTYAHWWIRQAVRKSLSEQSRTIRLPFHMVEATYRVKEARKQLYSENGRYPDIK 545
            SKGFKFSTYAHWWI+QAVRKSLS+QSRTIRLPFHMV+ATYRV+EA KQLYSENGR+P+ +
Sbjct: 378  SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVDATYRVREATKQLYSENGRHPNDE 437

Query: 544  EVAAATGLTMKRLMAVQLTPKPPRSLDQKIGINQNLKPMEIIADPEAETAEDLLMKQFMR 365
            EVA ATGL+MKRL  V LTPK PRSLDQKIGINQNLKP E+I+DPEAETAEDLLMKQFM+
Sbjct: 438  EVAEATGLSMKRLTTVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLMKQFMK 497

Query: 364  QDLEKVLDSLNPREKKVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIESCAFRKLKNK 185
            QDLEKVL++LNPREK+VVRWRFGLEDGRMKTLQEIGELMGVSRER+RQIES AFRKLKNK
Sbjct: 498  QDLEKVLNTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNK 557

Query: 184  RRTKHLQQYVVS 149
            +RTK+L+QY++S
Sbjct: 558  KRTKNLRQYLLS 569


>gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Mimulus guttatus]
          Length = 589

 Score =  561 bits (1445), Expect = e-157
 Identities = 324/607 (53%), Positives = 392/607 (64%), Gaps = 32/607 (5%)
 Frame = -1

Query: 1876 MACLLPQFKCPPDTLSTLFRTHT----NQLKTREPACSGAQCVLSXXXXXXXXXXT--VV 1715
            M+CLLPQFKC PDT +  F++ T    +  K+RE      QCVLS          T  ++
Sbjct: 1    MSCLLPQFKCSPDTFAVNFKSQTLFTVHSSKSRESINFRTQCVLSTTSPPPTMAATTTLL 60

Query: 1714 DLEKLQLHSLEANSNTVVADRP--------------------------LTYVGAVGPPTK 1613
            + EKLQL  LE   N++ ADR                           LTYVG+VGPP++
Sbjct: 61   EFEKLQLSPLETIPNSLPADRSWTTPRAKTSLLDLDKLTSLPVASNKTLTYVGSVGPPSE 120

Query: 1612 ANFEATLAIEALLTGXXXXXXXXXXXXXXXXXXXXXXAQDAALMVGYNPSSKSSSIPLDF 1433
             N  A L  EAL+T                       A+DAA+MV  + S+K        
Sbjct: 121  INLGANLDKEALITSDEAVITAAASEALALAKAAVKVAKDAAMMVSLHRSTK-------- 172

Query: 1432 PSETDILRLEGDQLTEIERGRTIGQYPIGAKTKKDEEHLMQFSLKNSENLDPTDDELKIE 1253
            P     L ++      + R   IG       + ++++H++    ++ ++ +P+ +EL++ 
Sbjct: 173  PDTKSFLEVDTSAERVVVREAEIG-------SGENDDHVLG---ESDDSEEPSAEELELL 222

Query: 1252 QMYLSTSIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQEVDYSDPLHY 1073
             + LS+SI V                                       QEVDYSDPL Y
Sbjct: 223  DLQLSSSIAVRSKRQIERKVRRGRAAEKAAANVVSVKSGSSKKKRSPV-QEVDYSDPLRY 281

Query: 1072 XXXXXXXXXXXXXXXXXXXXXGIQDLLKLEKIHEELAERCGGEPTFSQWAAAAGVDQKTL 893
                                 GIQ LLKLE++  EL ER GGEP++SQWAAAAGVDQKTL
Sbjct: 282  LRATTSSTRLLTASEEQVLSEGIQVLLKLERLQVELIERFGGEPSYSQWAAAAGVDQKTL 341

Query: 892  RKRINYGMLCKDKMVKSNIRLVISIAKKYQGAGMTLQDLVQEGCRGLVKGAEKFDASKGF 713
            R++INYG+LCKDKM+KSNIRLVISIAK YQGAGM LQDLVQEGCRGLV+GAEKFDA+KGF
Sbjct: 342  REQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGF 401

Query: 712  KFSTYAHWWIRQAVRKSLSEQSRTIRLPFHMVEATYRVKEARKQLYSENGRYPDIKEVAA 533
            KFSTYAHWWI+QAVRKSLS+QSRTIRLPFHMVEATYRVKEARKQLYSENGR P+ +EVA 
Sbjct: 402  KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRVPNDEEVAE 461

Query: 532  ATGLTMKRLMAVQLTPKPPRSLDQKIGINQNLKPMEIIADPEAETAEDLLMKQFMRQDLE 353
            ATGL+MKRL AV LTPKPPRSLDQKIG+NQ+LKP E+I+DPEAET+E+LL+KQFM+QDL 
Sbjct: 462  ATGLSMKRLSAVMLTPKPPRSLDQKIGVNQDLKPSEVISDPEAETSEELLIKQFMKQDLA 521

Query: 352  KVLDSLNPREKKVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIESCAFRKLKNKRRTK 173
             VLDSLNPREK+VV+WRFG+EDGRMKTLQEIGELMGVSRERVRQIESCAFRKLKNK+RTK
Sbjct: 522  DVLDSLNPREKQVVKWRFGIEDGRMKTLQEIGELMGVSRERVRQIESCAFRKLKNKKRTK 581

Query: 172  HLQQYVV 152
             LQQYV+
Sbjct: 582  QLQQYVM 588


>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum tuberosum]
          Length = 613

 Score =  553 bits (1424), Expect = e-154
 Identities = 302/526 (57%), Positives = 358/526 (68%), Gaps = 4/526 (0%)
 Frame = -1

Query: 1720 VVDLEKLQLHSLEANSNTVVADRPLTYVGAVGPPTKANF--EATLAIEALLTGXXXXXXX 1547
            V D++KL+L S EAN ++V  DRP TY GAVGPP +AN   E +LA E  +         
Sbjct: 92   VPDIQKLKLPSFEANPDSVAPDRPWTYTGAVGPPAEANTKPENSLASEEAIVAAAAAEAV 151

Query: 1546 XXXXXXXXXXXXXXXAQDAALMVGYNPSSKSSSIPLDFPSETDILRLEGDQLTEIERGRT 1367
                            QDA ++VGYN  + S ++     SE      E   L +    R 
Sbjct: 152  ALAKAALKGA------QDAVMLVGYNNLNDSDNVGRGTLSEARTAPFESVHLAQPGETRR 205

Query: 1366 IGQYPI--GAKTKKDEEHLMQFSLKNSENLDPTDDELKIEQMYLSTSIDVXXXXXXXXXX 1193
            +G      G++ K     L + +L +S++L+P+ +EL+I Q  LS  I V          
Sbjct: 206  VGVCAELNGSEMKWTGSSLFRETLTDSDDLEPSPEELEILQSQLSNVIAVKSNRQTERKA 265

Query: 1192 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLQEVDYSDPLHYXXXXXXXXXXXXXXXXXXXX 1013
                                        +Q+VDYSDPL Y                    
Sbjct: 266  KRAKSVEKAAANVVTVKSGSTSRKKRASVQDVDYSDPLRYLRGTTCSSRLLTASEEQELS 325

Query: 1012 XGIQDLLKLEKIHEELAERCGGEPTFSQWAAAAGVDQKTLRKRINYGMLCKDKMVKSNIR 833
             GIQDLLKLE++  EL ERCGG+PTF+QWAAAAGVDQ TLRKR+NYG+LCKDKM+KSN+R
Sbjct: 326  RGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGILCKDKMIKSNVR 385

Query: 832  LVISIAKKYQGAGMTLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIRQAVRKSLSE 653
            LVISIAK YQG GM LQDLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWI+QAVRKSLS+
Sbjct: 386  LVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSD 445

Query: 652  QSRTIRLPFHMVEATYRVKEARKQLYSENGRYPDIKEVAAATGLTMKRLMAVQLTPKPPR 473
            QSR IRLPFHMVEATYRVKEARKQL +ENGR+P+  EVA A GL+MKRL AV LTPK PR
Sbjct: 446  QSRMIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEAAGLSMKRLAAVMLTPKAPR 505

Query: 472  SLDQKIGINQNLKPMEIIADPEAETAEDLLMKQFMRQDLEKVLDSLNPREKKVVRWRFGL 293
            SLDQKIG N++LKP E++ADPEAET+E++L KQFMRQDLEKVLD+LNPREK+VVRWRFGL
Sbjct: 506  SLDQKIGFNESLKPSEVLADPEAETSEEILTKQFMRQDLEKVLDTLNPREKQVVRWRFGL 565

Query: 292  EDGRMKTLQEIGELMGVSRERVRQIESCAFRKLKNKRRTKHLQQYV 155
            EDGRMKTLQEIGELMGVSRER+RQIESCAFRKLKNK+RTK LQQY+
Sbjct: 566  EDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYI 611


>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
            lycopersicum]
          Length = 613

 Score =  552 bits (1422), Expect = e-154
 Identities = 301/526 (57%), Positives = 358/526 (68%), Gaps = 4/526 (0%)
 Frame = -1

Query: 1720 VVDLEKLQLHSLEANSNTVVADRPLTYVGAVGPPTKANF--EATLAIEALLTGXXXXXXX 1547
            V  ++KL+L S EAN ++V  DRP TY GAVGPP +AN   E +LA E  +         
Sbjct: 92   VPGIQKLKLPSFEANPDSVAPDRPWTYTGAVGPPAEANTKPEDSLASEEAIVAAAAAEAV 151

Query: 1546 XXXXXXXXXXXXXXXAQDAALMVGYNPSSKSSSIPLDFPSETDILRLEGDQLTEIERGRT 1367
                            QDA ++VGYN    S ++     SE      E   L +    R 
Sbjct: 152  ALAKAALKGA------QDAVMLVGYNNLKDSDNVGRGTLSEARTAPFESVHLAQPGETRG 205

Query: 1366 IGQYPI--GAKTKKDEEHLMQFSLKNSENLDPTDDELKIEQMYLSTSIDVXXXXXXXXXX 1193
            +G      G++ K     L + +L +S++L+P+ +EL+I Q  LS  I V          
Sbjct: 206  VGVCAELNGSEMKWTGSSLFRDTLTDSDDLEPSHEELEILQSQLSNVIAVKSNRQTERKA 265

Query: 1192 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLQEVDYSDPLHYXXXXXXXXXXXXXXXXXXXX 1013
                                        +Q+VDYSDPL Y                    
Sbjct: 266  RRAKAVERAAANVVSVKSGSTSRKKRASVQDVDYSDPLRYLRGTTCSSRLLTASEEQELS 325

Query: 1012 XGIQDLLKLEKIHEELAERCGGEPTFSQWAAAAGVDQKTLRKRINYGMLCKDKMVKSNIR 833
             GIQDLLKLE++  EL ERCGG+PTF+QWAAAAGVDQ TLRKR+NYG+LCKDKM+KSN+R
Sbjct: 326  RGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGILCKDKMIKSNVR 385

Query: 832  LVISIAKKYQGAGMTLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIRQAVRKSLSE 653
            LVISIAK YQG GM LQDLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWI+QAVRKSLS+
Sbjct: 386  LVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSD 445

Query: 652  QSRTIRLPFHMVEATYRVKEARKQLYSENGRYPDIKEVAAATGLTMKRLMAVQLTPKPPR 473
            QSRTIRLPFHMVEATYRVKEARKQL +ENGR+P+  EVA ATGL+MKRL AV LTPK PR
Sbjct: 446  QSRTIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEATGLSMKRLAAVMLTPKAPR 505

Query: 472  SLDQKIGINQNLKPMEIIADPEAETAEDLLMKQFMRQDLEKVLDSLNPREKKVVRWRFGL 293
            SLDQK+G N++LKP E++ADP+AET+E++L KQFMRQDLEKVLD+LNPREK+VVRWRFGL
Sbjct: 506  SLDQKVGFNESLKPSEVLADPDAETSEEILTKQFMRQDLEKVLDTLNPREKQVVRWRFGL 565

Query: 292  EDGRMKTLQEIGELMGVSRERVRQIESCAFRKLKNKRRTKHLQQYV 155
            EDGRMKTLQEIGELMGVSRER+RQIESCAFRKLKNK+RTK LQQY+
Sbjct: 566  EDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYI 611


>ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
            gi|482575837|gb|EOA40024.1| hypothetical protein
            CARUB_v10008711mg [Capsella rubella]
          Length = 571

 Score =  550 bits (1417), Expect = e-154
 Identities = 308/577 (53%), Positives = 374/577 (64%), Gaps = 2/577 (0%)
 Frame = -1

Query: 1873 ACLLPQFKCPPDTLSTLFRTHTNQLKTRE-PACSGAQCVLSXXXXXXXXXXTVVDLEKLQ 1697
            +CLLPQFKC PD+ S  FRT  +  K  + P     QC ++            +D+ KL+
Sbjct: 3    SCLLPQFKCQPDSFSIHFRTSFSVSKQNKGPVFFQPQCAVTTSPALLTS---TLDVAKLR 59

Query: 1696 LHSLEANSNTVVADRPLTYVGAVGPPTKANFEATLAIEALLTGXXXXXXXXXXXXXXXXX 1517
            L S + +S++ ++DR  TY G VGP T+A +   LA E LLT                  
Sbjct: 60   LPSFDTDSDSRISDRQWTYTGTVGPSTEAKYLEALASETLLTSDEAVVAAAAAEAVALAR 119

Query: 1516 XXXXXAQDAALMVGYNPSSKSSSIPLDFPSETDILRLEGDQLTEIERGRTIGQYPIG-AK 1340
                 A+DA L    N ++   S   D        R + DQ TE ER   +G   +    
Sbjct: 120  AAVKVAKDATLFKNSNNTNLLISSTAD-------KRSKWDQFTEKERAGILGHLAVSDTG 172

Query: 1339 TKKDEEHLMQFSLKNSENLDPTDDELKIEQMYLSTSIDVXXXXXXXXXXXXXXXXXXXXX 1160
               D+      + ++S +L     E+++ +   + S+ V                     
Sbjct: 173  IVSDKSTAPASNKESSADLISEIQEVELVEEQPAASLAVRSTRQTERKARRAKGLEKSAS 232

Query: 1159 XXXXXXXXXXXXXXXXXLQEVDYSDPLHYXXXXXXXXXXXXXXXXXXXXXGIQDLLKLEK 980
                              QEVD++DPL Y                     GIQDLLKLE+
Sbjct: 233  AIPSVKTGSSPRKKRVVAQEVDHNDPLRYLRVTTSSSKLLTVREEHELSAGIQDLLKLER 292

Query: 979  IHEELAERCGGEPTFSQWAAAAGVDQKTLRKRINYGMLCKDKMVKSNIRLVISIAKKYQG 800
            +  EL ERCG +PTFSQWA+AAGVDQK+LRKRINYG  CKDKM+KSNIRLVISIAK YQG
Sbjct: 293  LQAELTERCGRQPTFSQWASAAGVDQKSLRKRINYGTQCKDKMIKSNIRLVISIAKNYQG 352

Query: 799  AGMTLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIRQAVRKSLSEQSRTIRLPFHM 620
            AGM LQDLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWI+QAVRKSLS+QSR IRLPFHM
Sbjct: 353  AGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHM 412

Query: 619  VEATYRVKEARKQLYSENGRYPDIKEVAAATGLTMKRLMAVQLTPKPPRSLDQKIGINQN 440
            VEATYRVKEARKQLY+E GR+P+ +EVA ATGL+MKRLMAV L+PKPPRSLDQKIG+NQN
Sbjct: 413  VEATYRVKEARKQLYTEKGRHPENEEVAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQN 472

Query: 439  LKPMEIIADPEAETAEDLLMKQFMRQDLEKVLDSLNPREKKVVRWRFGLEDGRMKTLQEI 260
            LKP E+IADPEAET+ED+L+KQFMR+DL+KVLDSL  REK+V+RWRFG+EDGRMKTLQEI
Sbjct: 473  LKPSEVIADPEAETSEDILIKQFMREDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEI 532

Query: 259  GELMGVSRERVRQIESCAFRKLKNKRRTKHLQQYVVS 149
            GELMGVSRERVRQIES AFRKLKNK+R+ HLQQY+V+
Sbjct: 533  GELMGVSRERVRQIESSAFRKLKNKKRSNHLQQYLVA 569


>ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-like [Glycine max]
          Length = 564

 Score =  548 bits (1413), Expect = e-153
 Identities = 315/581 (54%), Positives = 379/581 (65%), Gaps = 5/581 (0%)
 Frame = -1

Query: 1876 MACLLPQFKCPPDTLSTLFRTH-----TNQLKTREPACSGAQCVLSXXXXXXXXXXTVVD 1712
            M+CLLP F C  DT    FRTH     T+  KTR   C   QCVLS           ++ 
Sbjct: 1    MSCLLPHFNCHLDT----FRTHPYALPTHLSKTRPNLCFQPQCVLSATSPST-----LLS 51

Query: 1711 LEKLQLHSLEANSNTVVADRPLTYVGAVGPPTKANFEATLAIEALLTGXXXXXXXXXXXX 1532
            LEK       ++ NT        Y+ AV PP +ANF++TL+ E+LLT             
Sbjct: 52   LEKKLALDAPSDPNT-----SWPYIAAVSPPLQANFKSTLSAESLLTNEEAVIVAAASEA 106

Query: 1531 XXXXXXXXXXAQDAALMVGYNPSSKSSSIPLDFPSETDILRLEGDQLTEIERGRTIGQYP 1352
                      A+DAAL+V   P +++           D+L     Q+ E+E G  + +  
Sbjct: 107  LALAKAAAKVAKDAALLVKKKPPAEAEYKSHVSSKSDDLLLKWFKQMEEVEDG--VAEES 164

Query: 1351 IGAKTKKDEEHLMQFSLKNSENLDPTDDELKIEQMYLSTSIDVXXXXXXXXXXXXXXXXX 1172
            +GA  +  E   +  S + S+ L+P+ +EL+  Q  LS SI V                 
Sbjct: 165  MGAGAEIMEGVDVSPSEEESD-LEPSHEELERLQEQLSDSIAVRSRRQTERKAKRVRATE 223

Query: 1171 XXXXXXXXXXXXXXXXXXXXXLQEVDYSDPLHYXXXXXXXXXXXXXXXXXXXXXGIQDLL 992
                                 +QEVDYSDPL Y                     GIQDLL
Sbjct: 224  KATTNFTSFKPGSSSRRKRVSMQEVDYSDPLRYLRTTTSASRLLTPTEEIKLSAGIQDLL 283

Query: 991  KLEKIHEELAERCGGEPTFSQWAAAAGVDQKTLRKRINYGMLCKDKMVKSNIRLVISIAK 812
            KLEKI E+LAER G +PTF+QWAA AGVDQKTLRKR+NYG+ CKDKM+KSNIRLVISIAK
Sbjct: 284  KLEKIQEDLAERFGSQPTFAQWAAVAGVDQKTLRKRLNYGIFCKDKMIKSNIRLVISIAK 343

Query: 811  KYQGAGMTLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIRQAVRKSLSEQSRTIRL 632
             YQG+GM LQDLVQEGCRGLVKGAEKFD +KGFKFSTYAHWWI+QAVRKSLS+QSRTIRL
Sbjct: 344  NYQGSGMNLQDLVQEGCRGLVKGAEKFDGTKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL 403

Query: 631  PFHMVEATYRVKEARKQLYSENGRYPDIKEVAAATGLTMKRLMAVQLTPKPPRSLDQKIG 452
            PFHMVEATYRVKEARKQLYSENGR PD +EVA ATGL+MKRL AV +TPK PRSL+QKIG
Sbjct: 404  PFHMVEATYRVKEARKQLYSENGRQPDDEEVAEATGLSMKRLNAVLMTPKAPRSLEQKIG 463

Query: 451  INQNLKPMEIIADPEAETAEDLLMKQFMRQDLEKVLDSLNPREKKVVRWRFGLEDGRMKT 272
            INQNLKP E+I+DP+AETAE+ L+KQFM++DLE+ LDSLNPRE++VVRWRFG++DGR KT
Sbjct: 464  INQNLKPSEVISDPDAETAEEQLLKQFMKKDLEEALDSLNPRERQVVRWRFGMDDGRTKT 523

Query: 271  LQEIGELMGVSRERVRQIESCAFRKLKNKRRTKHLQQYVVS 149
            LQEIGE++GVSRER+RQIES AF+KLKNK+RT HLQQY+VS
Sbjct: 524  LQEIGEMLGVSRERIRQIESSAFKKLKNKKRTNHLQQYLVS 564


>ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Populus trichocarpa]
            gi|550316911|gb|EEE99836.2| hypothetical protein
            POPTR_0019s06100g [Populus trichocarpa]
          Length = 555

 Score =  539 bits (1389), Expect = e-150
 Identities = 306/550 (55%), Positives = 360/550 (65%)
 Frame = -1

Query: 1798 KTREPACSGAQCVLSXXXXXXXXXXTVVDLEKLQLHSLEANSNTVVADRPLTYVGAVGPP 1619
            K  EP C  AQC LS           V++LEKL+L SLE++S+++ A+RP TY+G +GPP
Sbjct: 10   KNGEPFCFRAQCALSSASPSTSTA--VLNLEKLRLPSLESHSDSIAANRPWTYIGGIGPP 67

Query: 1618 TKANFEATLAIEALLTGXXXXXXXXXXXXXXXXXXXXXXAQDAALMVGYNPSSKSSSIPL 1439
             +  F  +LA E L+                        A+DAA M   N  S ++   +
Sbjct: 68   KEPLFGTSLATETLIINDEAVIAAAAAEAVALARAAVKVAKDAAEMAK-NYCSVNTETKI 126

Query: 1438 DFPSETDILRLEGDQLTEIERGRTIGQYPIGAKTKKDEEHLMQFSLKNSENLDPTDDELK 1259
               S  D        LT  ER   IG     A+T   EE   Q+  + S+   PT +EL 
Sbjct: 127  PIASTADSFSSMWCLLTGKERADIIG-VSFSAETGLREECSTQYPTEESDCFGPTHEELA 185

Query: 1258 IEQMYLSTSIDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQEVDYSDPL 1079
            + +  LS SI V                                      +QEVD SDPL
Sbjct: 186  LLEKQLSESIVVRSKRQTQRKAKRARAAEKAAANFVFMKSGSACKKKRVPVQEVDQSDPL 245

Query: 1078 HYXXXXXXXXXXXXXXXXXXXXXGIQDLLKLEKIHEELAERCGGEPTFSQWAAAAGVDQK 899
             +                     GIQDLLKLE+I EEL ER GG+PTF+QWAAAA VDQ 
Sbjct: 246  RFFRGASTSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGKPTFAQWAAAARVDQI 305

Query: 898  TLRKRINYGMLCKDKMVKSNIRLVISIAKKYQGAGMTLQDLVQEGCRGLVKGAEKFDASK 719
            TLRKR+NY +LCKDKM+KSNIRLVISIAK YQGAGM LQDLVQEGCRGLV+G EKFDASK
Sbjct: 306  TLRKRLNYAILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGVEKFDASK 365

Query: 718  GFKFSTYAHWWIRQAVRKSLSEQSRTIRLPFHMVEATYRVKEARKQLYSENGRYPDIKEV 539
            GFKFSTYAHWWIRQAVR+SLS+QSRTIRLPFHMV+ATYRVKEARKQ YSENGR+PD KEV
Sbjct: 366  GFKFSTYAHWWIRQAVRRSLSDQSRTIRLPFHMVDATYRVKEARKQFYSENGRHPDDKEV 425

Query: 538  AAATGLTMKRLMAVQLTPKPPRSLDQKIGINQNLKPMEIIADPEAETAEDLLMKQFMRQD 359
            A ATGL+MKRL AV LTPK PRSLDQK+G N +LK  E+ ADPEAETAEDLLMK+FM++D
Sbjct: 426  AEATGLSMKRLSAVLLTPKAPRSLDQKMGFNMDLKLSEVTADPEAETAEDLLMKEFMKKD 485

Query: 358  LEKVLDSLNPREKKVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIESCAFRKLKNKRR 179
            LE+VL+SL+PRE +V+RWRFG+EDGRMKTLQEIGELMGVSRER+RQIE  AFRKLKNK R
Sbjct: 486  LERVLESLSPRENQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIELSAFRKLKNKNR 545

Query: 178  TKHLQQYVVS 149
            TK L+QY+VS
Sbjct: 546  TKQLRQYLVS 555


>ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutrema salsugineum]
            gi|557095448|gb|ESQ36030.1| hypothetical protein
            EUTSA_v10007187mg [Eutrema salsugineum]
          Length = 579

 Score =  537 bits (1383), Expect = e-150
 Identities = 306/587 (52%), Positives = 373/587 (63%), Gaps = 12/587 (2%)
 Frame = -1

Query: 1873 ACLLPQFKCPPDTLSTLFRTHTNQLKTREPACS-GAQCVLSXXXXXXXXXXTVVDLEKLQ 1697
            +CLLPQFKC PD+ S  F+T  +  K  + +     QC +S           ++D+ KL+
Sbjct: 3    SCLLPQFKCQPDSFSIHFKTSYSLSKHNKGSVFFQPQCAVSTSPPLLTS---MLDVAKLR 59

Query: 1696 LHSLEANSNTVVADRPLTYVGAVGPPTKANFEATLAIEALLTGXXXXXXXXXXXXXXXXX 1517
            L S + +S++ ++DR  TY G VGP T+A +   LA E LLT                  
Sbjct: 60   LPSFDTDSDSRISDRQWTYTGTVGPSTEAKYLEALASETLLTSDEAVVAAAAAEAVALAR 119

Query: 1516 XXXXXAQDAALMVGYNPSSKSSSIPLDFPSETDILRLEGDQLTEIERGRTIGQYPIGAKT 1337
                 A+DA        S ++S       S     R + DQ TE ER   +G   +    
Sbjct: 120  AAVKVAKDAT-------SFRNSYNTKVVVSSAADKRSKWDQFTEKERAGILGHLAVSDTG 172

Query: 1336 KKDEEHLM-----------QFSLKNSENLDPTDDELKIEQMYLSTSIDVXXXXXXXXXXX 1190
               ++                + ++S +L     E+++ +  LS S  V           
Sbjct: 173  VVSDKSTAPAPAPAPAPAPDCNNESSGDLKSEKQEVELLEEQLSVSSAVRSTRQTERKAR 232

Query: 1189 XXXXXXXXXXXXXXXXXXXXXXXXXXXLQEVDYSDPLHYXXXXXXXXXXXXXXXXXXXXX 1010
                                        QEVD++DPL Y                     
Sbjct: 233  RAKGLEKTASSMQSVKTGSSSRKKRAPSQEVDHNDPLRYLRMTTSSSKLLTAREEQELSE 292

Query: 1009 GIQDLLKLEKIHEELAERCGGEPTFSQWAAAAGVDQKTLRKRINYGMLCKDKMVKSNIRL 830
            GIQDLLKLE++  EL ERCG +PTF+QWA+AAGVDQK+LRKRINYG  CKD+M+KSNIRL
Sbjct: 293  GIQDLLKLERLQAELTERCGHQPTFAQWASAAGVDQKSLRKRINYGTQCKDRMIKSNIRL 352

Query: 829  VISIAKKYQGAGMTLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIRQAVRKSLSEQ 650
            VISIAK YQGAGM LQDLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWI+QAVRKSLS+Q
Sbjct: 353  VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQ 412

Query: 649  SRTIRLPFHMVEATYRVKEARKQLYSENGRYPDIKEVAAATGLTMKRLMAVQLTPKPPRS 470
            SR IRLPFHMVEATYRVKEARKQLYSE G+ P+ +EVA ATGL+MKRLMAV L+PKPPRS
Sbjct: 413  SRMIRLPFHMVEATYRVKEARKQLYSETGKQPENEEVAEATGLSMKRLMAVLLSPKPPRS 472

Query: 469  LDQKIGINQNLKPMEIIADPEAETAEDLLMKQFMRQDLEKVLDSLNPREKKVVRWRFGLE 290
            LDQKIGINQNLKP E+IADPEAET+ED+L+KQFMRQDL+KVLDSL+ REK+V+RWRFG+E
Sbjct: 473  LDQKIGINQNLKPSEVIADPEAETSEDILIKQFMRQDLDKVLDSLSTREKQVIRWRFGME 532

Query: 289  DGRMKTLQEIGELMGVSRERVRQIESCAFRKLKNKRRTKHLQQYVVS 149
            DGRMKTLQEIGE MGVSRERVRQIES AFRKLKNK+R+ HLQQY+V+
Sbjct: 533  DGRMKTLQEIGETMGVSRERVRQIESSAFRKLKNKKRSNHLQQYLVA 579


>ref|XP_002889701.1| hypothetical protein ARALYDRAFT_470915 [Arabidopsis lyrata subsp.
            lyrata] gi|297335543|gb|EFH65960.1| hypothetical protein
            ARALYDRAFT_470915 [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score =  536 bits (1381), Expect = e-149
 Identities = 303/578 (52%), Positives = 370/578 (64%), Gaps = 3/578 (0%)
 Frame = -1

Query: 1873 ACLLPQFKCPPDTLSTLFRTHTNQLKTREPACS-GAQCVLSXXXXXXXXXXTVVDLEKLQ 1697
            +CLLPQFKCPPD+ S  FRT     K  + +     QC +S           ++D+ KL+
Sbjct: 3    SCLLPQFKCPPDSFSIHFRTSFCARKHNKGSVFFQPQCAVSTSPALLTS---MLDVAKLR 59

Query: 1696 LHSLEANSNTVVADRPLTYVGAVGPPTKANFEATLAIEALLTGXXXXXXXXXXXXXXXXX 1517
            L S + +S++ ++DR  TY    GP T+A +   LA E LLT                  
Sbjct: 60   LPSFDTDSDSRISDRQWTYTRTDGPSTEAKYLEALASETLLTSDEAVVVAAAAEAVALAR 119

Query: 1516 XXXXXAQDAALMVGYNPSSKSSSIPLDFPSETDILRLEGDQLTEIERGRTIGQYPIGAKT 1337
                 A+DA L    N ++   S   D        R + DQ TE ER   +G   +    
Sbjct: 120  AAVKVAKDATLFKNSNNTNLLISSTAD-------KRSKWDQFTEKERAGILGHLAVSDNG 172

Query: 1336 KKDEEHLMQFSLKNSEN--LDPTDDELKIEQMYLSTSIDVXXXXXXXXXXXXXXXXXXXX 1163
               ++     S K S         +E+++ +   S S+ V                    
Sbjct: 173  IVSDKITAPASNKESPGDLESEKQEEVELLEEQPSVSLAVRSTRQTERKARRAKGLEKTA 232

Query: 1162 XXXXXXXXXXXXXXXXXXLQEVDYSDPLHYXXXXXXXXXXXXXXXXXXXXXGIQDLLKLE 983
                               QEVD++DPL Y                     GIQDLLKLE
Sbjct: 233  SGIPSVKTGSNPRKKRLVAQEVDHNDPLRYLRMTTSSSKLLTVREEHELSAGIQDLLKLE 292

Query: 982  KIHEELAERCGGEPTFSQWAAAAGVDQKTLRKRINYGMLCKDKMVKSNIRLVISIAKKYQ 803
            ++  EL ERCG +PTF+QWA+AAGVDQK+LRKRI++G LCKDKM+KSNIRLVISIAK YQ
Sbjct: 293  RLQTELTERCGRQPTFAQWASAAGVDQKSLRKRIHHGTLCKDKMIKSNIRLVISIAKNYQ 352

Query: 802  GAGMTLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIRQAVRKSLSEQSRTIRLPFH 623
            GAGM LQDLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWI+QAVRKSLS+QSR IRLPFH
Sbjct: 353  GAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFH 412

Query: 622  MVEATYRVKEARKQLYSENGRYPDIKEVAAATGLTMKRLMAVQLTPKPPRSLDQKIGINQ 443
            MVEATYRVKEARKQLYSE G++P  +E+A ATGL+MKRLMAV L+PKPPRSLDQKIG+NQ
Sbjct: 413  MVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQ 472

Query: 442  NLKPMEIIADPEAETAEDLLMKQFMRQDLEKVLDSLNPREKKVVRWRFGLEDGRMKTLQE 263
            NLKP E+IADPEA T+ED+L+K+FMRQDL+KVLDSL  REK+V+RWRFG+EDGRMKTLQE
Sbjct: 473  NLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQE 532

Query: 262  IGELMGVSRERVRQIESCAFRKLKNKRRTKHLQQYVVS 149
            IGE+MGVSRERVRQIES AFRKLKNK+R+ HLQQY+V+
Sbjct: 533  IGEMMGVSRERVRQIESSAFRKLKNKKRSNHLQQYLVA 570