BLASTX nr result

ID: Akebia25_contig00017258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00017258
         (1428 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ72569.1| putative reverse transcriptase family member [Mal...    59   4e-06
gb|ABN08556.1| Polyprotein, putative [Medicago truncatula]             59   4e-06
ref|XP_003593597.1| Telomerase-binding protein EST1A [Medicago t...    59   7e-06
gb|ABD32368.2| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DN...    59   7e-06

>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
          Length = 212

 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
 Frame = +2

Query: 38  LCDRCILSKLKGRFYKTAIRSTMINKAECWAVK-KHVRRISAVEKSTLSQMSG---KSKI 205
           LCDRC+  KLKG+FY+T IR  M+   ECWAVK +HV ++   E   L  M G   K KI
Sbjct: 58  LCDRCMPLKLKGKFYRTTIRPAMLYGTECWAVKYQHVHKMGVAEMRMLRWMCGHTRKDKI 117

Query: 206 R 208
           R
Sbjct: 118 R 118


>gb|ABN08556.1| Polyprotein, putative [Medicago truncatula]
          Length = 137

 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 9/79 (11%)
 Frame = +2

Query: 38  LCDRCILSKLKGRFYKTAIRSTMINKAECWAVK-KHVRRISAVEKSTLSQMSGKSK---- 202
           LCD+ +  KLKG+FY+TA+R  ++   ECWAVK +H  ++S VE   L  MSGK++    
Sbjct: 44  LCDKKVPLKLKGKFYRTAVRPALLYGTECWAVKSQHENQVSVVEMRMLRWMSGKTRHDRI 103

Query: 203 ----IRQN*KLAHLMEILV 247
               IR+   +A ++E LV
Sbjct: 104 RNDTIRERVGVAPIVEKLV 122


>ref|XP_003593597.1| Telomerase-binding protein EST1A [Medicago truncatula]
            gi|355482645|gb|AES63848.1| Telomerase-binding protein
            EST1A [Medicago truncatula]
          Length = 1189

 Score = 58.5 bits (140), Expect = 7e-06
 Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = +2

Query: 38   LCDRCILSKLKGRFYKTAIRSTMINKAECWAVK-KHVRRISAVEKSTLSQMSGKSK 202
            LCD+ +L KLKG+FY+T +R T++   ECW VK +H  ++S  E   L  MSGK++
Sbjct: 1047 LCDKKVLLKLKGKFYRTTVRPTLLYGTECWTVKSQHENQVSVAEMMMLRWMSGKTR 1102


>gb|ABD32368.2| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DNA-binding,
           putative [Medicago truncatula]
          Length = 118

 Score = 58.5 bits (140), Expect = 7e-06
 Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = +2

Query: 38  LCDRCILSKLKGRFYKTAIRSTMINKAECWAVK-KHVRRISAVEKSTLSQMSGKSK 202
           LCD+ +L KLKG+FY+T +R T++   ECW VK +H  ++S  E   L  MSGK++
Sbjct: 45  LCDKKVLLKLKGKFYRTTVRPTLLYGTECWTVKSQHENQVSVAEMMMLRWMSGKTR 100


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