BLASTX nr result
ID: Akebia25_contig00017174
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00017174
(276 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot... 112 7e-23
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ... 111 9e-23
ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 4... 108 6e-22
dbj|BAF95850.1| putative chloroplast chlorophyll a/b binding pro... 108 1e-21
gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pach... 107 2e-21
emb|CAJ77391.1| major chlorophyll a/b binding protein LHCb1.1 [S... 104 1e-20
gb|AAA33396.1| light-harvesting chlorophyll a/b protein precurso... 102 4e-20
emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S... 102 7e-20
ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245... 100 2e-19
gb|ABB55370.1| chlorophyll a-b binding protein 3C-like [Solanum ... 100 2e-19
ref|XP_006305533.1| hypothetical protein CARUB_v10010022mg [Caps... 100 2e-19
ref|XP_006356076.1| PREDICTED: chlorophyll a-b binding protein 3... 100 3e-19
gb|ABF70112.1| chlorophyll A-B binding protein (CAB), putative [... 100 3e-19
gb|ADC35579.1| chloroplast chlorophyll a/b binding protein [Lyco... 100 4e-19
emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 pr... 100 4e-19
ref|XP_002893588.1| hypothetical protein ARALYDRAFT_473203 [Arab... 99 5e-19
gb|AGJ50622.1| chlorophyll a/b binding protein [Salicornia brach... 99 6e-19
sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro... 99 8e-19
sp|P27496.1|CB25_TOBAC RecName: Full=Chlorophyll a-b binding pro... 99 8e-19
dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein... 98 1e-18
>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
cathayensis]
Length = 267
Score = 112 bits (279), Expect = 7e-23
Identities = 51/61 (83%), Positives = 57/61 (93%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSPSS-DLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
G+A+ L+PSS DLLGEGR+TMRK+ GRPKP+SSGSPWYG DRVKYLGPFSGEPPSYLTGE
Sbjct: 15 GQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74
Query: 272 F 274
F
Sbjct: 75 F 75
>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus] gi|449525484|ref|XP_004169747.1|
PREDICTED: chlorophyll a-b binding protein,
chloroplastic-like [Cucumis sativus]
Length = 267
Score = 111 bits (278), Expect = 9e-23
Identities = 52/61 (85%), Positives = 57/61 (93%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSPS-SDLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
G+AV LSP+ SDLLGEGRITMRK+ G+PKP+SSGSPWYG DRVKYLGPFSGEPPSYLTGE
Sbjct: 15 GQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74
Query: 272 F 274
F
Sbjct: 75 F 75
>ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
vinifera] gi|147833686|emb|CAN73057.1| hypothetical
protein VITISV_007597 [Vitis vinifera]
Length = 267
Score = 108 bits (271), Expect = 6e-22
Identities = 51/61 (83%), Positives = 56/61 (91%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSPS-SDLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
GKA+ L+PS SDLLGEGR+TMRK+ GR KP+SSGSPWYG DRVKYLGPFSGEPPSYLTGE
Sbjct: 15 GKALKLAPSASDLLGEGRVTMRKTGGRAKPVSSGSPWYGTDRVKYLGPFSGEPPSYLTGE 74
Query: 272 F 274
F
Sbjct: 75 F 75
>dbj|BAF95850.1| putative chloroplast chlorophyll a/b binding protein [Vitis hybrid
cultivar]
Length = 234
Score = 108 bits (269), Expect = 1e-21
Identities = 51/61 (83%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSPS-SDLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
GKA L+PS SDLLGEGR+TMRK+ GR KP+SSGSPWYG DRVKYLGPFSGEPPSYLTGE
Sbjct: 13 GKAFQLAPSASDLLGEGRVTMRKTGGRAKPVSSGSPWYGTDRVKYLGPFSGEPPSYLTGE 72
Query: 272 F 274
F
Sbjct: 73 F 73
>gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
terminalis]
Length = 267
Score = 107 bits (266), Expect = 2e-21
Identities = 50/61 (81%), Positives = 56/61 (91%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSPS-SDLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
GKAV L+PS S+LLG GR++MRK+ GRPKP+SSGSPWYG DRVKYLGPFSGEPPSYLTGE
Sbjct: 15 GKAVKLAPSASELLGVGRVSMRKTGGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 74
Query: 272 F 274
F
Sbjct: 75 F 75
>emb|CAJ77391.1| major chlorophyll a/b binding protein LHCb1.1 [Spinacia oleracea]
gi|283549607|emb|CAX64457.1| major chlorophyll a/b
binding protein LHCb1.1 precursor [Spinacia oleracea]
Length = 267
Score = 104 bits (260), Expect = 1e-20
Identities = 49/61 (80%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSPS-SDLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
GKAV L+PS SD++GEGRI+MRKS G+PK +SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAVKLNPSTSDMIGEGRISMRKSAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74
Query: 272 F 274
F
Sbjct: 75 F 75
>gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor [Lemna gibba]
Length = 266
Score = 102 bits (255), Expect = 4e-20
Identities = 46/61 (75%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSPS-SDLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
GKAV L+P+ S++ GEGR++MRK+ G+PKP+SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 14 GKAVKLAPAASEVFGEGRVSMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 73
Query: 272 F 274
F
Sbjct: 74 F 74
>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
Length = 267
Score = 102 bits (253), Expect = 7e-20
Identities = 46/61 (75%), Positives = 54/61 (88%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSPS-SDLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
GKA+ L P+ S++LGEGR+TMRK+ G+PK +SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74
Query: 272 F 274
F
Sbjct: 75 F 75
>ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245729 [Solanum
lycopersicum]
Length = 554
Score = 100 bits (250), Expect = 2e-19
Identities = 48/61 (78%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSPSS-DLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
GKAV LSPSS ++ G GRITMRK+ +PKP SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74
Query: 272 F 274
F
Sbjct: 75 F 75
Score = 97.1 bits (240), Expect = 2e-18
Identities = 46/61 (75%), Positives = 51/61 (83%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSPSS-DLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
GKAV LSPSS ++ G GR+TMRK+ + KP SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 302 GKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 361
Query: 272 F 274
F
Sbjct: 362 F 362
>gb|ABB55370.1| chlorophyll a-b binding protein 3C-like [Solanum tuberosum]
Length = 267
Score = 100 bits (250), Expect = 2e-19
Identities = 49/61 (80%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSPSS-DLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
GKAV LSPSS ++ G GRITMRKSV + KP SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAVKLSPSSSEITGNGRITMRKSVAKAKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74
Query: 272 F 274
F
Sbjct: 75 F 75
>ref|XP_006305533.1| hypothetical protein CARUB_v10010022mg [Capsella rubella]
gi|565496548|ref|XP_006305913.1| hypothetical protein
CARUB_v10011129mg [Capsella rubella]
gi|482574244|gb|EOA38431.1| hypothetical protein
CARUB_v10010022mg [Capsella rubella]
gi|482574624|gb|EOA38811.1| hypothetical protein
CARUB_v10011129mg [Capsella rubella]
Length = 267
Score = 100 bits (249), Expect = 2e-19
Identities = 49/61 (80%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSP-SSDLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
GKAVNLSP SS++LG GR+TMRK+V +PK SGSPWYG+DRVKYLGPFSGEPPSYLTGE
Sbjct: 15 GKAVNLSPASSEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGEPPSYLTGE 73
Query: 272 F 274
F
Sbjct: 74 F 74
>ref|XP_006356076.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform X2 [Solanum tuberosum]
Length = 267
Score = 100 bits (248), Expect = 3e-19
Identities = 48/61 (78%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSPSS-DLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
GKAV LSPSS ++ G GR+TMRKSV + KP SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAVKLSPSSSEVTGNGRVTMRKSVAKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74
Query: 272 F 274
F
Sbjct: 75 F 75
>gb|ABF70112.1| chlorophyll A-B binding protein (CAB), putative [Musa balbisiana]
Length = 267
Score = 100 bits (248), Expect = 3e-19
Identities = 49/62 (79%), Positives = 54/62 (87%), Gaps = 2/62 (3%)
Frame = +2
Query: 95 GKAVNLSPS-SDLLGEGRITMRKSVGRPKPIS-SGSPWYGADRVKYLGPFSGEPPSYLTG 268
GKAV L+PS SD+LGEGR+TMRKS + KP + SGSPWYG DRVKYLGPFSGEPPSYLTG
Sbjct: 14 GKAVKLAPSASDVLGEGRVTMRKSTAKAKPAAASGSPWYGPDRVKYLGPFSGEPPSYLTG 73
Query: 269 EF 274
EF
Sbjct: 74 EF 75
>gb|ADC35579.1| chloroplast chlorophyll a/b binding protein [Lycoris radiata]
Length = 265
Score = 99.8 bits (247), Expect = 4e-19
Identities = 49/62 (79%), Positives = 54/62 (87%), Gaps = 2/62 (3%)
Frame = +2
Query: 95 GKAVNLSPS--SDLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTG 268
GKAV L PS S+LLG GRI+MRK++ KP+SSGSPWYGADRVKYLGPFSGEPPSYLTG
Sbjct: 14 GKAVKLGPSAASELLGNGRISMRKTIA--KPVSSGSPWYGADRVKYLGPFSGEPPSYLTG 71
Query: 269 EF 274
EF
Sbjct: 72 EF 73
>emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
oleracea]
Length = 267
Score = 99.8 bits (247), Expect = 4e-19
Identities = 45/61 (73%), Positives = 53/61 (86%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSPS-SDLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
GKA+ L P+ S++L EGR+TMRK+ G+PK +SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74
Query: 272 F 274
F
Sbjct: 75 F 75
>ref|XP_002893588.1| hypothetical protein ARALYDRAFT_473203 [Arabidopsis lyrata subsp.
lyrata] gi|297339430|gb|EFH69847.1| hypothetical protein
ARALYDRAFT_473203 [Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 99.4 bits (246), Expect = 5e-19
Identities = 48/61 (78%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSPS-SDLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
GKAVNLSP+ S++LG GR+TMRK+V +PK SGSPWYG+DRVKYLGPFSGEPPSYLTGE
Sbjct: 10 GKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGEPPSYLTGE 68
Query: 272 F 274
F
Sbjct: 69 F 69
>gb|AGJ50622.1| chlorophyll a/b binding protein [Salicornia brachiata]
Length = 267
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/60 (71%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
Frame = +2
Query: 95 GKAVNLSPSS-DLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
GK + L P++ ++LGEGR+TMRK+ G+PK ++SGSPWYG DRVKYLGPFSGEPPSYLTGE
Sbjct: 15 GKPIKLGPNAAEILGEGRVTMRKTAGKPKQVASGSPWYGPDRVKYLGPFSGEPPSYLTGE 74
>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
binding protein precursor [Spinacia oleracea]
gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
binding protein LHCb1.3 [Spinacia oleracea]
Length = 267
Score = 98.6 bits (244), Expect = 8e-19
Identities = 45/61 (73%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSPS-SDLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
GKAV L P+ S+++GEGRITMRK+ G+PK + S SPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGE 74
Query: 272 F 274
F
Sbjct: 75 F 75
>sp|P27496.1|CB25_TOBAC RecName: Full=Chlorophyll a-b binding protein 50, chloroplastic;
AltName: Full=LHCII type I CAB-50; Short=LHCP; Flags:
Precursor gi|19833|emb|CAA36956.1| unnamed protein
product [Nicotiana tabacum]
Length = 267
Score = 98.6 bits (244), Expect = 8e-19
Identities = 46/61 (75%), Positives = 53/61 (86%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSPSS-DLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
GKAV LSPSS ++ G G++TMRK+V + KP+SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74
Query: 272 F 274
F
Sbjct: 75 F 75
>dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 98.2 bits (243), Expect = 1e-18
Identities = 45/61 (73%), Positives = 52/61 (85%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 GKAVNLSPSS-DLLGEGRITMRKSVGRPKPISSGSPWYGADRVKYLGPFSGEPPSYLTGE 271
GKAV LSPSS ++ G G++TMRK+ + KP+SSGSPWYG DRVKYLGPFSGE PSYLTGE
Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74
Query: 272 F 274
F
Sbjct: 75 F 75