BLASTX nr result
ID: Akebia25_contig00017075
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00017075
(1084 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 405 e-110
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 403 e-110
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 402 e-109
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr... 394 e-107
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 394 e-107
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 394 e-107
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 394 e-107
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun... 394 e-107
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 392 e-106
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 392 e-106
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 390 e-106
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 388 e-105
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309... 377 e-102
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 373 e-101
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s... 372 e-100
ref|XP_002312652.1| RNA recognition motif-containing family prot... 357 5e-96
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu... 343 9e-92
ref|XP_002315647.1| RNA recognition motif-containing family prot... 343 9e-92
gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus... 328 3e-87
ref|XP_002889992.1| RNA recognition motif-containing protein [Ar... 302 2e-79
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 405 bits (1040), Expect = e-110
Identities = 220/356 (61%), Positives = 255/356 (71%), Gaps = 27/356 (7%)
Frame = -3
Query: 1079 DEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGG 906
+EEYG +QK+QYQG GAIPALA+EELMGEDDEYDDLYNDVNVG+G +Q QQ E P + G
Sbjct: 13 EEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAG 72
Query: 905 VANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQI---------TK 753
V N +Q + D ++ + GVS+ +PGV +E K +N G FP Q
Sbjct: 73 VGNGRLQVKKTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTHFPAQNDVQVAVNRPNM 131
Query: 752 GIGDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMLPKSGVDPNQMS----------L 609
G G+YPD VSQKGSV +A V N F+G + P++GVDP+ M L
Sbjct: 132 GSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNMPGRVANEPAPVL 191
Query: 608 GPGA--PRGVTQMPINQ--VNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELE 441
PGA P+G +P NQ VN+N NR M+NEN IRP +ENG +MLFVGELHWWTTDAELE
Sbjct: 192 NPGAAGPQGAL-IPANQMGVNINVNRAMVNENQIRPPLENGGTMLFVGELHWWTTDAELE 250
Query: 440 SVLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFAS 261
SVLSQYGRVKEIKFFDERASGKSKGYCQVEFF++ AA+ACK+GMNGH FNGR CVV FAS
Sbjct: 251 SVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCVVAFAS 310
Query: 260 PQTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 93
PQTLKQMGASY+NK Q Q QSQ GRRPMNDG GRGG MNYQ G D GRNFG+ GW
Sbjct: 311 PQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSG-DGGRNFGRGGW 365
>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695488|ref|XP_007044903.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708837|gb|EOY00734.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 403 bits (1035), Expect = e-110
Identities = 212/354 (59%), Positives = 258/354 (72%), Gaps = 24/354 (6%)
Frame = -3
Query: 1082 GDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAG 909
GDEEYG +QK+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q+Q+SE P G
Sbjct: 12 GDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAPPQPG 71
Query: 908 GVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITK-------- 753
G+ + G+QAQ N+ R + G S+ + IPGV ++ K NV A +P+Q +
Sbjct: 72 GMGSTGLQAQKNEAPEPR-GEAGGSQGLNIPGVSVQGKHLNVTARYPEQDGQPAVSRPEM 130
Query: 752 GIGDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMLPKSGVDPN------------QM 615
G G YP +SQKG V + QV N F+G S K G+DP+ +
Sbjct: 131 GSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVPQKIANVPAQSL 190
Query: 614 SLGPGAPRGVTQMPINQVNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESV 435
+ G G P+G +P NQ+ LN N PM++EN +RP +ENG +MLFVGELHWWTTDAELESV
Sbjct: 191 NSGTGGPQGAPHVPPNQMGLNVNHPMISENQVRPPIENGPTMLFVGELHWWTTDAELESV 250
Query: 434 LSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQ 255
LSQYGRVKEIKFFDERASGKSKGYCQVEF++ +A+ACKEGM+G+ FNGRACVV FASPQ
Sbjct: 251 LSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGMDGYMFNGRACVVAFASPQ 310
Query: 254 TLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 93
TLKQMGASY+NK Q Q+Q+Q GRRP NDG+GRGG MNYQ G D GRN+G+ GW
Sbjct: 311 TLKQMGASYMNKNQGQSQAQPQGRRP-NDGLGRGGNMNYQSG-DAGRNYGRGGW 362
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 402 bits (1032), Expect = e-109
Identities = 219/356 (61%), Positives = 254/356 (71%), Gaps = 27/356 (7%)
Frame = -3
Query: 1079 DEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGG 906
+EEYG +QK+QYQG GAIPALA+EELMGEDDEYDDLYNDVNVG+G +Q QQ E P + G
Sbjct: 13 EEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAG 72
Query: 905 VANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQI---------TK 753
V N +Q + D ++ + GVS+ +PGV +E K +N G FP Q
Sbjct: 73 VGNGRLQVKKTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTHFPAQNDVQVAVNRPNM 131
Query: 752 GIGDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMLPKSGVDPNQMS----------L 609
G G+YPD VSQKGSV +A V N F+G + ++GVDP+ M L
Sbjct: 132 GSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRVANEPAPVL 191
Query: 608 GPGA--PRGVTQMPINQ--VNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELE 441
PGA P+G +P NQ VN+N NR M+NEN IRP +ENG +MLFVGELHWWTTDAELE
Sbjct: 192 NPGAAGPQGAL-IPANQMGVNINVNRAMVNENQIRPPLENGGTMLFVGELHWWTTDAELE 250
Query: 440 SVLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFAS 261
SVLSQYGRVKEIKFFDERASGKSKGYCQVEFF++ AA+ACK+GMNGH FNGR CVV FAS
Sbjct: 251 SVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCVVAFAS 310
Query: 260 PQTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 93
PQTLKQMGASY+NK Q Q QSQ GRRPMNDG GRGG MNYQ G D GRNFG+ GW
Sbjct: 311 PQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSG-DGGRNFGRGGW 365
>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508708844|gb|EOY00741.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 602
Score = 394 bits (1013), Expect = e-107
Identities = 204/354 (57%), Positives = 257/354 (72%), Gaps = 24/354 (6%)
Frame = -3
Query: 1082 GDEEYGS-QKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAG 909
GDEEYG QK+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q+Q+SE P+ G
Sbjct: 12 GDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAPLQPG 71
Query: 908 GVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKGI------ 747
G+ + G++AQ N+ R+ G S+ + IPGV ++ K NV A +P++ +
Sbjct: 72 GLGSTGLKAQRNEAPEPRVEAGG-SQGLNIPGVSVQGKHPNVSARYPEKEEQPAVNRPEM 130
Query: 746 --GDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMLPKSGVDPN------------QM 615
G YP +SQKGSV+ + QV N F+G + K G+DP+ +
Sbjct: 131 VSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSL 190
Query: 614 SLGPGAPRGVTQMPINQVNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESV 435
+ G G P+G +P NQ+ N N P+MNEN ++P +ENG +MLFVGELHWWTTDAELESV
Sbjct: 191 NSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELHWWTTDAELESV 250
Query: 434 LSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQ 255
LSQYGR+KEIKFFDE+ASGKSKGYCQVEF++ +A+ CKEGMNG+ FNGRACVV FASPQ
Sbjct: 251 LSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGRACVVAFASPQ 310
Query: 254 TLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 93
TLKQMGASY+NK Q Q+Q+Q GRRP N+G+GRGG +NYQ G D GRN+G+ GW
Sbjct: 311 TLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSG-DAGRNYGRGGW 362
>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
gi|508708843|gb|EOY00740.1| RNA-binding family protein
isoform 5, partial [Theobroma cacao]
Length = 656
Score = 394 bits (1013), Expect = e-107
Identities = 204/354 (57%), Positives = 257/354 (72%), Gaps = 24/354 (6%)
Frame = -3
Query: 1082 GDEEYGS-QKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAG 909
GDEEYG QK+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q+Q+SE P+ G
Sbjct: 12 GDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAPLQPG 71
Query: 908 GVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKGI------ 747
G+ + G++AQ N+ R+ G S+ + IPGV ++ K NV A +P++ +
Sbjct: 72 GLGSTGLKAQRNEAPEPRVEAGG-SQGLNIPGVSVQGKHPNVSARYPEKEEQPAVNRPEM 130
Query: 746 --GDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMLPKSGVDPN------------QM 615
G YP +SQKGSV+ + QV N F+G + K G+DP+ +
Sbjct: 131 VSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSL 190
Query: 614 SLGPGAPRGVTQMPINQVNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESV 435
+ G G P+G +P NQ+ N N P+MNEN ++P +ENG +MLFVGELHWWTTDAELESV
Sbjct: 191 NSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELHWWTTDAELESV 250
Query: 434 LSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQ 255
LSQYGR+KEIKFFDE+ASGKSKGYCQVEF++ +A+ CKEGMNG+ FNGRACVV FASPQ
Sbjct: 251 LSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGRACVVAFASPQ 310
Query: 254 TLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 93
TLKQMGASY+NK Q Q+Q+Q GRRP N+G+GRGG +NYQ G D GRN+G+ GW
Sbjct: 311 TLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSG-DAGRNYGRGGW 362
>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508708842|gb|EOY00739.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 697
Score = 394 bits (1013), Expect = e-107
Identities = 204/354 (57%), Positives = 257/354 (72%), Gaps = 24/354 (6%)
Frame = -3
Query: 1082 GDEEYGS-QKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAG 909
GDEEYG QK+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q+Q+SE P+ G
Sbjct: 12 GDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAPLQPG 71
Query: 908 GVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKGI------ 747
G+ + G++AQ N+ R+ G S+ + IPGV ++ K NV A +P++ +
Sbjct: 72 GLGSTGLKAQRNEAPEPRVEAGG-SQGLNIPGVSVQGKHPNVSARYPEKEEQPAVNRPEM 130
Query: 746 --GDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMLPKSGVDPN------------QM 615
G YP +SQKGSV+ + QV N F+G + K G+DP+ +
Sbjct: 131 VSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSL 190
Query: 614 SLGPGAPRGVTQMPINQVNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESV 435
+ G G P+G +P NQ+ N N P+MNEN ++P +ENG +MLFVGELHWWTTDAELESV
Sbjct: 191 NSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELHWWTTDAELESV 250
Query: 434 LSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQ 255
LSQYGR+KEIKFFDE+ASGKSKGYCQVEF++ +A+ CKEGMNG+ FNGRACVV FASPQ
Sbjct: 251 LSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGRACVVAFASPQ 310
Query: 254 TLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 93
TLKQMGASY+NK Q Q+Q+Q GRRP N+G+GRGG +NYQ G D GRN+G+ GW
Sbjct: 311 TLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSG-DAGRNYGRGGW 362
>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695496|ref|XP_007044905.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590695500|ref|XP_007044906.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708839|gb|EOY00736.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708841|gb|EOY00738.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 652
Score = 394 bits (1013), Expect = e-107
Identities = 204/354 (57%), Positives = 257/354 (72%), Gaps = 24/354 (6%)
Frame = -3
Query: 1082 GDEEYGS-QKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAG 909
GDEEYG QK+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q+Q+SE P+ G
Sbjct: 12 GDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAPLQPG 71
Query: 908 GVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKGI------ 747
G+ + G++AQ N+ R+ G S+ + IPGV ++ K NV A +P++ +
Sbjct: 72 GLGSTGLKAQRNEAPEPRVEAGG-SQGLNIPGVSVQGKHPNVSARYPEKEEQPAVNRPEM 130
Query: 746 --GDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMLPKSGVDPN------------QM 615
G YP +SQKGSV+ + QV N F+G + K G+DP+ +
Sbjct: 131 VSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSL 190
Query: 614 SLGPGAPRGVTQMPINQVNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESV 435
+ G G P+G +P NQ+ N N P+MNEN ++P +ENG +MLFVGELHWWTTDAELESV
Sbjct: 191 NSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELHWWTTDAELESV 250
Query: 434 LSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQ 255
LSQYGR+KEIKFFDE+ASGKSKGYCQVEF++ +A+ CKEGMNG+ FNGRACVV FASPQ
Sbjct: 251 LSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGRACVVAFASPQ 310
Query: 254 TLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 93
TLKQMGASY+NK Q Q+Q+Q GRRP N+G+GRGG +NYQ G D GRN+G+ GW
Sbjct: 311 TLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSG-DAGRNYGRGGW 362
>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
gi|462422613|gb|EMJ26876.1| hypothetical protein
PRUPE_ppa002814mg [Prunus persica]
Length = 630
Score = 394 bits (1011), Expect = e-107
Identities = 215/345 (62%), Positives = 251/345 (72%), Gaps = 16/345 (4%)
Frame = -3
Query: 1079 DEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGG 906
DEEYG +QKLQYQGSGAI ALA+EE M EDDEYDDLYNDVNV EGF+QM +SE P+ GG
Sbjct: 10 DEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQMHRSEAPLPPGG 69
Query: 905 VANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKGIGDYPDEV 726
V N G+QAQ D +R+ + GVS+E IPGV ++ K S+ A FP+Q G P
Sbjct: 70 VGNGGLQAQKTDVTETRV-QAGVSQESKIPGVSVQGKYSSAVAQFPEQQ----GQPP--- 121
Query: 725 SQKGSVSAMGSEAQVGNTEFRGPSPMLPKSGVDPNQ------------MSLGPGAPRGVT 582
+ E ++G+T + G + M P G D + M+ G P GVT
Sbjct: 122 --------VAKEPELGSTGY-GSTTMPPNVGGDSSDITGKTALESVPSMNSGTAGPTGVT 172
Query: 581 QMPINQVNL--NANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKE 408
QMP NQ+++ NANRPM NEN IRP VENG++MLFVGELHWWTTDAELESVLSQYGRVKE
Sbjct: 173 QMPTNQISIKVNANRPMFNENQIRPPVENGSTMLFVGELHWWTTDAELESVLSQYGRVKE 232
Query: 407 IKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQTLKQMGASY 228
IKFFDERASGKSKGYCQVEF + AA+ACKEGM+G+ FNGRACVV FASPQTLKQMGASY
Sbjct: 233 IKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYLFNGRACVVAFASPQTLKQMGASY 292
Query: 227 LNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 93
L+K+Q Q QSQ GRRPMN+GVGRGGG+NYQ G GRNFG+ GW
Sbjct: 293 LSKSQGQTQSQQPGRRPMNEGVGRGGGVNYQTGDTGGRNFGRGGW 337
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 392 bits (1006), Expect = e-106
Identities = 216/355 (60%), Positives = 247/355 (69%), Gaps = 26/355 (7%)
Frame = -3
Query: 1079 DEEYGSQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGV 903
DE G+QK+QYQG GAIPALA+EELMGEDDEYDDLYNDVNVG+G +Q QQ E P + GV
Sbjct: 11 DEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAGV 70
Query: 902 ANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQI---------TKG 750
N +Q + D R+ G S+ IPGV +E K +N G+ FP Q G
Sbjct: 71 GNGRLQVKKTDVPEQRVQVGG-SQGSNIPGVSVEGKYTNAGSHFPAQNDVQVAVNRPNMG 129
Query: 749 IGDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMLPKSGVDPNQMS----------LG 606
G+YPD VSQKGSV +A V N F+G + ++GVDP+ M L
Sbjct: 130 SGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRVANEPAPVLN 189
Query: 605 PGA--PRGVTQMPINQ--VNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELES 438
PGA P+G +P NQ VN N NR M+NEN IRP +ENG +MLFVGELHWWTTDAELES
Sbjct: 190 PGAAGPQGAL-IPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGELHWWTTDAELES 248
Query: 437 VLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASP 258
VLSQYGR KEIKFFDERASGKSKGYCQVEFF++ AA+ACK+GMNGH FNGR CVV FASP
Sbjct: 249 VLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCVVAFASP 308
Query: 257 QTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 93
QTLKQMGASY+NK Q Q QSQ G RPMNDG GRGG NYQ G D GRNFG+ GW
Sbjct: 309 QTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSG-DGGRNFGRGGW 362
>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
gi|567891321|ref|XP_006438181.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540376|gb|ESR51420.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540377|gb|ESR51421.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
Length = 655
Score = 392 bits (1006), Expect = e-106
Identities = 215/355 (60%), Positives = 247/355 (69%), Gaps = 26/355 (7%)
Frame = -3
Query: 1079 DEEYGSQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGV 903
DE G+QK+QYQG GAIPALA+EELMGEDDEYDDLYND+NVG+G +Q QQ E P + GV
Sbjct: 11 DEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQPEAPPPSAGV 70
Query: 902 ANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQI---------TKG 750
N +Q + D R+ G S+ IPGV +E K +N G+ FP Q G
Sbjct: 71 GNGRLQVKKTDVPEQRVQVGG-SQGSNIPGVSVEGKYTNAGSDFPAQNDVQVAVNRPNMG 129
Query: 749 IGDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMLPKSGVDPNQMS----------LG 606
G+YPD VSQKGSV +A V N F+G + ++GVDP+ M L
Sbjct: 130 SGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRAANEPAPVLN 189
Query: 605 PGA--PRGVTQMPINQ--VNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELES 438
PGA P+G +P NQ VN N NR M+NEN IRP +ENG +MLFVGELHWWTTDAELES
Sbjct: 190 PGAAGPQGAL-IPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGELHWWTTDAELES 248
Query: 437 VLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASP 258
VLSQYGR KEIKFFDERASGKSKGYCQVEFF++ AA+ACK+GMNGH FNGR CVV FASP
Sbjct: 249 VLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCVVAFASP 308
Query: 257 QTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 93
QTLKQMGASY+NK Q Q QSQ G RPMNDG GRGG NYQ G D GRNFG+ GW
Sbjct: 309 QTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSG-DGGRNFGRGGW 362
>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
uncharacterized protein LOC100268141 isoform 2 [Vitis
vinifera]
Length = 647
Score = 390 bits (1003), Expect = e-106
Identities = 213/354 (60%), Positives = 252/354 (71%), Gaps = 25/354 (7%)
Frame = -3
Query: 1079 DEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSEPVSAGGV 903
DEEYG +QK+ +QG GAI ALA++ELMGEDDEYDDLYNDVNVGEGF+QM +SE + GV
Sbjct: 10 DEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHRSEAPAPSGV 69
Query: 902 ANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSN----------VGATFPDQITK 753
G D+ + + G S+ + IPGV IE K SN + P+ +
Sbjct: 70 MAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPMAVKGPEMGST 129
Query: 752 GIGDYPDEVSQKGSVSAMGSEAQVGNTEFRGPSPMLPKSGVDPNQ------------MSL 609
D P VSQKG V M + QV N F+G +P+ K+G +P+ ++
Sbjct: 130 SHLDGPS-VSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIANESTPVLNS 188
Query: 608 GPGAPRGVTQMPINQV--NLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESV 435
G G PR V QM NQ+ N+N NRPM+NEN IRP V+NG +MLFVGELHWWTTDAELESV
Sbjct: 189 GTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPAVDNGATMLFVGELHWWTTDAELESV 248
Query: 434 LSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQ 255
LSQYGRVKEIKFFDERASGKSKGYCQVEF+++ AA+ACKEGMNG+ FNGRACVV FASPQ
Sbjct: 249 LSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMNGYIFNGRACVVAFASPQ 308
Query: 254 TLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 93
TLKQMGASY+NKTQ Q+QSQ GRRPMNDGVGRGGGMN QGG D GRN+G+ GW
Sbjct: 309 TLKQMGASYMNKTQAQSQSQ--GRRPMNDGVGRGGGMNMQGG-DAGRNYGRGGW 359
>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
gi|223546091|gb|EEF47594.1| RNA binding protein, putative
[Ricinus communis]
Length = 644
Score = 388 bits (996), Expect = e-105
Identities = 217/349 (62%), Positives = 255/349 (73%), Gaps = 20/349 (5%)
Frame = -3
Query: 1079 DEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGG 906
DEEYG +QKLQYQGSGAIPALAEEE MGEDDEYDDLYNDVN+GE F+QM +SE P +
Sbjct: 10 DEEYGGAQKLQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNIGENFLQMHRSEAPPAPPS 68
Query: 905 VANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKG--IGD--Y 738
V N G Q + ++DL R+ G S+ + IPGV +E K S G FP+Q KG IG Y
Sbjct: 69 VGNGGFQPRNSNDL--RVESGG-SQGLNIPGVAVESKYST-GTHFPEQNVKGPEIGSVGY 124
Query: 737 PD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMLPKSGVDP----NQMSLGP------GAP 594
PD ++QK V M +++Q N F+G + GVDP N++S P G P
Sbjct: 125 PDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISNDPTPVPNAGVP 184
Query: 593 RGVTQMPINQVNLN--ANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYG 420
R + Q+P +Q+N+N NR NEN IRP +ENG++ML+VGELHWWTTDAELE+VLSQYG
Sbjct: 185 RVIPQLPASQMNMNMDTNRSATNENQIRPPLENGSTMLYVGELHWWTTDAELENVLSQYG 244
Query: 419 RVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQTLKQM 240
VKEIKFFDERASGKSKGYCQVEF+++ AA+ACKEGMNGH FNGRACVV FAS QTLKQM
Sbjct: 245 MVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFNGRACVVAFASQQTLKQM 304
Query: 239 GASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 93
GASY+NK Q Q QSQ GRRPMNDG GRGG MNYQGG D GRNFG+ GW
Sbjct: 305 GASYMNKNQGQPQSQNQGRRPMNDGAGRGGNMNYQGG-DAGRNFGRGGW 352
>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
subsp. vesca]
Length = 646
Score = 377 bits (968), Expect = e-102
Identities = 206/343 (60%), Positives = 245/343 (71%), Gaps = 17/343 (4%)
Frame = -3
Query: 1079 DEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSEP-VSAGG 906
+EEYG +QKLQYQ SGAIPALA+EE M EDDEYDDLYNDVNVGEGF+QM + EP + G
Sbjct: 13 EEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQMHRPEPPLPPAG 72
Query: 905 VANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKG-IGDYPDE 729
V N G+QAQ N+ R+ + G S+EV PG +E K S+V P+Q + + P+
Sbjct: 73 VGNGGLQAQKNNVPEQRV-QGGASQEVKNPGFSVEGKYSSV----PEQKDQPPVSVVPEM 127
Query: 728 VSQKGSVSAMGSEAQVGNTEFRGPSPMLPKSGVDPNQ------------MSLGPGAPRGV 585
SQKG V M +AQV N F+G + M D + M+ G P V
Sbjct: 128 ASQKGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTGKIANGPIPSMNSGSNGPPAV 187
Query: 584 TQMPINQVNL--NANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVK 411
QMP NQ+N+ N NRPM+NEN IRP VENG++ LFVGELHWWTTDAELE VLSQ+GR+K
Sbjct: 188 QQMPANQMNMKINVNRPMVNENQIRPPVENGSATLFVGELHWWTTDAELEGVLSQFGRIK 247
Query: 410 EIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQTLKQMGAS 231
EIKFFDERASGKSKGYCQV+F++ AASACKEGM+G+ FNGRACVV FAS QTLKQMG S
Sbjct: 248 EIKFFDERASGKSKGYCQVDFYDPAAASACKEGMDGYVFNGRACVVAFASSQTLKQMGDS 307
Query: 230 YLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGK 102
Y+NK+Q Q Q+Q GRRPMNDG GRGG MN+QGG D GRNFG+
Sbjct: 308 YVNKSQGQVQTQPQGRRPMNDGAGRGGNMNFQGG-DTGRNFGR 349
>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Solanum tuberosum]
gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Solanum tuberosum]
Length = 648
Score = 373 bits (958), Expect = e-101
Identities = 206/355 (58%), Positives = 245/355 (69%), Gaps = 25/355 (7%)
Frame = -3
Query: 1082 GDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAG 909
GDEEYG S K+QY GSG IPALAE+E+MGEDDEYDDLYNDVN+GEGF+Q+Q+SE PV +
Sbjct: 12 GDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQLQRSEVPVPSV 71
Query: 908 GVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQ----ITKGIGD 741
N QAQ + SR G S+E IPG+ E K + FP Q + + +
Sbjct: 72 DAGNGNFQAQKDSFPASRAGGLG-SEEAKIPGIATEGKYAGTEVQFPQQKGEPVVERETE 130
Query: 740 YPDEVSQKGSVSA--MGSEAQVGNTEFRGPSPMLPKSGVDPNQM-------------SLG 606
P + +QK SA M +Q GN+ ++G PM K G DP M S+
Sbjct: 131 RPADAAQKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMPEKNASEATPLMNSVV 190
Query: 605 PGAPRGVTQMPINQVN----LNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELES 438
PG PR V MP NQ+N +N N P+++E RP +ENGN+MLFVGELHWWTTDAELES
Sbjct: 191 PG-PRVVPHMPTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFVGELHWWTTDAELES 249
Query: 437 VLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASP 258
VL+QYG VKEIKFFDERASGKSKGYCQVEFF+ +A+ACKEGMNG+NFNGRACVV FA+P
Sbjct: 250 VLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAAACKEGMNGYNFNGRACVVAFATP 309
Query: 257 QTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 93
QT+KQMG+SY NKTQ Q QSQ GRRPMN+GVGR GG NY G D GRNFG+ W
Sbjct: 310 QTIKQMGSSYANKTQNQVQSQPQGRRPMNEGVGR-GGPNYTPG-DAGRNFGRGSW 362
>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
notabilis]
Length = 636
Score = 372 bits (954), Expect = e-100
Identities = 212/352 (60%), Positives = 251/352 (71%), Gaps = 23/352 (6%)
Frame = -3
Query: 1079 DEEYG-SQKLQYQGSG-AIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSEPVS--- 915
DEEYG +QK QYQGSG AI ALA+EELMG+DDEYDDLYNDVNVGEGF+Q+Q+SE S
Sbjct: 10 DEEYGGAQKHQYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQLQRSEAPSLPA 69
Query: 914 AGGVANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKGIGDYP 735
A GV N G+QAQ + R + G S++ IPGV E + S+ G+ FP Q G
Sbjct: 70 AAGVGN-GLQAQKRNFPEPR-EEIGGSQQPNIPGVSAEGRFSSAGSQFPGQQD---GLKV 124
Query: 734 DEVSQKGSV----SAMGSEAQVGNTEFRGPSPMLPKSGVD----PNQM--------SLGP 603
D+ S+ GS+ A GS+ F+G PML GVD P +M + G
Sbjct: 125 DKKSEAGSMVYPDGASGSQKGRIVAGFQGSKPMLHSVGVDSSDIPGKMVNEPIQAPNSGG 184
Query: 602 GAPRGVTQMPINQVNLNAN--RPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLS 429
PRG+ M NQ +NAN P++NEN IRP +ENG++MLFVGELHWWTTDAELESVLS
Sbjct: 185 AGPRGILPMQGNQTTVNANVSHPIVNENQIRPSIENGSTMLFVGELHWWTTDAELESVLS 244
Query: 428 QYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQTL 249
QYGRVKEIKFFDERASGKSKGYCQVE++++ AA ACKEGM+GH FNGRACVV FASPQTL
Sbjct: 245 QYGRVKEIKFFDERASGKSKGYCQVEYYDAAAAVACKEGMHGHVFNGRACVVAFASPQTL 304
Query: 248 KQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 93
KQMGA+Y++K QVQ QSQ GRRP+NDGVGRGG N+Q G D GRNFG+ GW
Sbjct: 305 KQMGAAYMSKNQVQNQSQPQGRRPINDGVGRGGNPNFQSG-DGGRNFGRGGW 355
>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|222852472|gb|EEE90019.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 619
Score = 357 bits (916), Expect = 5e-96
Identities = 196/347 (56%), Positives = 234/347 (67%), Gaps = 24/347 (6%)
Frame = -3
Query: 1061 QKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQ 885
+K+QYQGSGAIPALAEEE MGEDDEYDDLYNDVNVGE F+QM SE P V N G Q
Sbjct: 7 EKMQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATVGNGGFQ 65
Query: 884 AQMNDDLGSRIPKHGVSK-EVTIPGVEIEKKDSNVGATFPDQITKGIGDYPDEV------ 726
+ + SRI G +T G +E SN A FP+Q + +V
Sbjct: 66 TRNAHE--SRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAVEAQDVGPVDGS 123
Query: 725 --SQKGSVSAMGSEAQVGNTEFRGPSPMLPKSGVDPNQMS------------LGPGAPRG 588
+QKG V M + QV N F+ +P+ P GVDP+ MS G PRG
Sbjct: 124 SVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEPLPITGSAGPRG 183
Query: 587 VTQMPINQVNLNA--NRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRV 414
QM +NQ++++A NRP++NEN +RP +ENG++ L+VGELHWWTTDAELES SQ+GRV
Sbjct: 184 APQMQVNQMHMSADVNRPVVNENQVRPPIENGSTTLYVGELHWWTTDAELESFASQFGRV 243
Query: 413 KEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQTLKQMGA 234
KEIKFFDERASGKSKGYCQV+F+E+ AA+ACKEGMNGH FNGR CVV FASPQTLKQMGA
Sbjct: 244 KEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRPCVVAFASPQTLKQMGA 303
Query: 233 SYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 93
SY+NKTQ Q Q+Q GR MNDG GRGG N+Q G D GRN+G+ W
Sbjct: 304 SYMNKTQGQPQTQSQGRGSMNDGAGRGGNANFQSG-DGGRNYGRGAW 349
>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
gi|550329195|gb|ERP56065.1| hypothetical protein
POPTR_0010s06150g [Populus trichocarpa]
Length = 591
Score = 343 bits (879), Expect = 9e-92
Identities = 190/327 (58%), Positives = 219/327 (66%), Gaps = 4/327 (1%)
Frame = -3
Query: 1061 QKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQ 885
+K+QYQGSGAIPALAEEEL GEDDEYDDLYNDVNVGE F+QM SE P N G Q
Sbjct: 7 EKMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATAGNGGFQ 65
Query: 884 AQMNDDLGSRIPKHGVSKEVTI-PGVEIEKKDSNVGATFPDQITKGIGDYPDEVSQKGSV 708
+ + SR+ G T GV +E K SN GA FP+Q GIG ++V G
Sbjct: 66 TRNAHE--SRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQAGIGVEANDVGSIG-- 121
Query: 707 SAMGSEAQVGNTEFRGPSPMLPKSGVDPNQMSLGPGAPRGVTQMPINQVNLNA--NRPMM 534
G + V G PRGV QM +NQ+N+NA NRP++
Sbjct: 122 --YGDGSSVAQK---------------------GSAGPRGVPQMQVNQMNMNADVNRPVV 158
Query: 533 NENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQV 354
NEN +RP +ENG + L+VGELHWWTTDAELESV SQYGRVKEIKFFDERASGKSKGYCQV
Sbjct: 159 NENQVRPPIENGPTTLYVGELHWWTTDAELESVASQYGRVKEIKFFDERASGKSKGYCQV 218
Query: 353 EFFESVAASACKEGMNGHNFNGRACVVTFASPQTLKQMGASYLNKTQVQAQSQVSGRRPM 174
+F+E+ AA+ACKEGMN H FNGR CVV FAS QTLKQMGASY++KTQ Q Q Q GR M
Sbjct: 219 DFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQMGASYMSKTQGQPQPQSQGRGSM 278
Query: 173 NDGVGRGGGMNYQGGADNGRNFGKVGW 93
NDG+GRGG NYQ G D GRN+G+ GW
Sbjct: 279 NDGMGRGGNANYQSG-DGGRNYGRGGW 304
>ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|222864687|gb|EEF01818.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 573
Score = 343 bits (879), Expect = 9e-92
Identities = 190/327 (58%), Positives = 219/327 (66%), Gaps = 4/327 (1%)
Frame = -3
Query: 1061 QKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVSAGGVANEGVQ 885
+K+QYQGSGAIPALAEEEL GEDDEYDDLYNDVNVGE F+QM SE P N G Q
Sbjct: 7 EKMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATAGNGGFQ 65
Query: 884 AQMNDDLGSRIPKHGVSKEVTI-PGVEIEKKDSNVGATFPDQITKGIGDYPDEVSQKGSV 708
+ + SR+ G T GV +E K SN GA FP+Q GIG ++V G
Sbjct: 66 TRNAHE--SRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQAGIGVEANDVGSIG-- 121
Query: 707 SAMGSEAQVGNTEFRGPSPMLPKSGVDPNQMSLGPGAPRGVTQMPINQVNLNA--NRPMM 534
G + V G PRGV QM +NQ+N+NA NRP++
Sbjct: 122 --YGDGSSVAQK---------------------GSAGPRGVPQMQVNQMNMNADVNRPVV 158
Query: 533 NENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQV 354
NEN +RP +ENG + L+VGELHWWTTDAELESV SQYGRVKEIKFFDERASGKSKGYCQV
Sbjct: 159 NENQVRPPIENGPTTLYVGELHWWTTDAELESVASQYGRVKEIKFFDERASGKSKGYCQV 218
Query: 353 EFFESVAASACKEGMNGHNFNGRACVVTFASPQTLKQMGASYLNKTQVQAQSQVSGRRPM 174
+F+E+ AA+ACKEGMN H FNGR CVV FAS QTLKQMGASY++KTQ Q Q Q GR M
Sbjct: 219 DFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQMGASYMSKTQGQPQPQSQGRGSM 278
Query: 173 NDGVGRGGGMNYQGGADNGRNFGKVGW 93
NDG+GRGG NYQ G D GRN+G+ GW
Sbjct: 279 NDGMGRGGNANYQSG-DGGRNYGRGGW 304
>gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus]
Length = 639
Score = 328 bits (840), Expect = 3e-87
Identities = 188/353 (53%), Positives = 225/353 (63%), Gaps = 24/353 (6%)
Frame = -3
Query: 1082 GDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSEPVSAGG 906
GDEEYG +QK+QY GAIPALAE+E++G+DDEYDDLYNDVNVGEGFMQMQ+SE
Sbjct: 12 GDEEYGGNQKMQYHHGGAIPALAEDEMIGDDDEYDDLYNDVNVGEGFMQMQRSEAPPPSA 71
Query: 905 VANEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITK----GIGDY 738
V N N G+R S+EV V E + G DQ G
Sbjct: 72 VGNNSFSISKNTAPGTRAEAIA-SQEVNNGRVGNEGSYAPNGVQLSDQKNNLTAVGGPAQ 130
Query: 737 PDEVSQKGSVSAMGSEAQVGNTEFRGPSPMLPKSGVDPNQMSLG------------PGAP 594
P + SQ+ + + + +Q + ++G ML K+ D S G+
Sbjct: 131 PVDASQRVRLPEVANSSQAAHLGYQGSEIMLHKTATDRMNNSENIVGEPASLVYPNTGSS 190
Query: 593 RGVTQMPIN------QVNLNANRPMMNENVIRPVV-ENGNSMLFVGELHWWTTDAELESV 435
+GV Q P N VN+N NR M +E +IRP ENGN M++VGELHWWTTDAE+ESV
Sbjct: 191 KGVPQAPSNLMNSNANVNVNVNRSMDDEYLIRPSGGENGNPMIYVGELHWWTTDAEVESV 250
Query: 434 LSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQ 255
L QYGRVKEIKFFDERASGKSKGYCQVEF++ AA+ACK+GM GH FNGRACVVT+A+PQ
Sbjct: 251 LIQYGRVKEIKFFDERASGKSKGYCQVEFYDPAAATACKDGMQGHIFNGRACVVTYANPQ 310
Query: 254 TLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVG 96
T KQMGASY NK Q Q+QSQ+ GR PMNDG GRG G NY G D GRNFG+ G
Sbjct: 311 TSKQMGASY-NKNQGQSQSQLQGRNPMNDGAGRGNGTNYPSG-DAGRNFGRGG 361
>ref|XP_002889992.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297335834|gb|EFH66251.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 573
Score = 302 bits (773), Expect = 2e-79
Identities = 173/345 (50%), Positives = 228/345 (66%), Gaps = 19/345 (5%)
Frame = -3
Query: 1067 GSQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQM--QQSEPVSAGGVANE 894
G+QK+ +QGSG IPALA+EELMG+DDEYDDLY+DVNVGE F Q Q P GG N
Sbjct: 9 GNQKILHQGSGTIPALADEELMGDDDEYDDLYSDVNVGESFFQAHNQPQPPAQVGGTGNA 68
Query: 893 GVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQIT-----------KG- 750
+QAQ + P+ G+ T+ G + + G + PD + KG
Sbjct: 69 SLQAQTSHVAAE--PRMGIVSGGTVEG-KYRNDGGHNGISGPDTRSDVYPQASSFGAKGL 125
Query: 749 -IGDYPDEVSQKGSVSAMGSEAQVGNTEFRGPSPMLPKSGVDPNQMSLGPGAPRGVTQMP 573
I +++ Q+GS S + + N F G + +P+ P G P+G Q+P
Sbjct: 126 NIDIQSNKIGQQGSTSVV-----LNNHGFSGNAVNVPEL---PVHNPYG-APPQGAQQIP 176
Query: 572 INQVNLNANRPMMNENVIRP-VVENGNSMLFVGELHWWTTDAELESVLSQYGRVKEIKFF 396
++Q+++N N MMN++ +P VV+NGN+MLFVGELHWWTTDAE+ESVLSQYGRVKEIKFF
Sbjct: 177 VSQMSVNPN-VMMNKSPTQPFVVDNGNTMLFVGELHWWTTDAEIESVLSQYGRVKEIKFF 235
Query: 395 DERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQTLKQMGASYLNKT 216
DER SGKSKGYCQVEF++S AA++CKEGMNG+ FNG+ACVV FASP+TLKQMGA++ +
Sbjct: 236 DERVSGKSKGYCQVEFYDSAAAASCKEGMNGYIFNGKACVVAFASPETLKQMGANFTGRN 295
Query: 215 QVQAQSQVSGRRPMNDGVGRG---GGMNYQGGADNGRNFGKVGWA 90
Q Q+Q+ RRP+N+G+GRG MN Q G D GRN+G+ G+A
Sbjct: 296 --QGQNQIQNRRPLNEGMGRGNNNNNMNTQNG-DGGRNYGRGGFA 337