BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00016973
         (1397 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containi...   709   0.0  
ref|XP_004300258.1| PREDICTED: pentatricopeptide repeat-containi...   697   0.0  
ref|XP_007210329.1| hypothetical protein PRUPE_ppa002049mg [Prun...   696   0.0  
ref|XP_004148730.1| PREDICTED: pentatricopeptide repeat-containi...   689   0.0  
ref|XP_006385629.1| hypothetical protein POPTR_0003s08800g [Popu...   684   0.0  
gb|EXB99769.1| hypothetical protein L484_023300 [Morus notabilis]     679   0.0  
ref|XP_007039546.1| Pentatricopeptide (PPR) repeat-containing pr...   678   0.0  
ref|XP_006485434.1| PREDICTED: pentatricopeptide repeat-containi...   674   0.0  
ref|XP_004245879.1| PREDICTED: pentatricopeptide repeat-containi...   674   0.0  
ref|XP_006352838.1| PREDICTED: pentatricopeptide repeat-containi...   674   0.0  
gb|EYU38385.1| hypothetical protein MIMGU_mgv1a002010mg [Mimulus...   657   0.0  
ref|XP_004509010.1| PREDICTED: pentatricopeptide repeat-containi...   654   0.0  
ref|XP_002863397.1| pentatricopeptide repeat-containing protein ...   647   0.0  
ref|XP_003608637.1| Pentatricopeptide repeat-containing protein ...   647   0.0  
ref|NP_199470.1| pentatricopeptide repeat-containing protein [Ar...   644   0.0  
ref|XP_003524052.1| PREDICTED: pentatricopeptide repeat-containi...   643   0.0  
ref|XP_006281680.1| hypothetical protein CARUB_v10027819mg [Caps...   640   0.0  
ref|XP_002519842.1| pentatricopeptide repeat-containing protein,...   632   e-178
ref|XP_003549976.1| PREDICTED: pentatricopeptide repeat-containi...   630   e-178
ref|XP_006436751.1| hypothetical protein CICLE_v10033739mg [Citr...   624   e-176

>ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
            chloroplastic [Vitis vinifera]
          Length = 723

 Score =  709 bits (1830), Expect = 0.0
 Identities = 349/473 (73%), Positives = 396/473 (83%), Gaps = 13/473 (2%)
 Frame = -2

Query: 1381 STSAVELHLHLTITHSSDRKKKHIFFSSSVLRNPTKRHTFLCNSSKSPPNLEEPQ----- 1217
            +T    + +H +I H S   K    FS S  +  +   T  CNSS   P   +P+     
Sbjct: 4    ATLCTGVDVHFSIPHPSHTTKYPNLFSKST-KFSSNTFTIRCNSSSRSPPKPKPKPKPTS 62

Query: 1216 --------SNQSLADQLKPLSLNLLSDHSPPQPNLLTKPKSTWANPSKPKPAVLSLQRHK 1061
                     N SL++QLKPLS  +L+     Q +L++KPKSTW NP+KPKP+VLSLQRHK
Sbjct: 63   SDSEQTNHQNPSLSEQLKPLSKTILTRDHSGQTHLVSKPKSTWINPTKPKPSVLSLQRHK 122

Query: 1060 RSPHSYNPKLRDLKLFSKKLNDCDPTSEAEFLTTLEEIPHPPNRENALLILNSLKPWQKT 881
            R  +SYNP++RDLKLF+KK+N+ + + E+EFL  LE+IPHPP R+NALL+LNSLKPW KT
Sbjct: 123  RHNYSYNPQIRDLKLFAKKINESESSDESEFLAVLEQIPHPPTRDNALLLLNSLKPWPKT 182

Query: 880  HLFFNWIKTHNLFPLETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIIT 701
            +LFFNWIKT NLFP+ETIFYNVTMKSLRFGRQFQLIE+LA+EMI  GVELDNITYSTIIT
Sbjct: 183  YLFFNWIKTQNLFPMETIFYNVTMKSLRFGRQFQLIEELANEMISTGVELDNITYSTIIT 242

Query: 700  CAKRCNLFDKAVDWFERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKP 521
            CAKRCNLFDKAV WFERMY TGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKP
Sbjct: 243  CAKRCNLFDKAVKWFERMYKTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKP 302

Query: 520  DPIAFSVLGKMFGEAGDYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLF 341
            DPIAF+VLGKMFGEAGDYDGI YVLQEMKS+GV+PNLVVYNTLLEAMGKAGKPGLARSLF
Sbjct: 303  DPIAFAVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGLARSLF 362

Query: 340  EEMITSGLTPNEKTLTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADL 161
            EEM+ SG+ P+ KTLTALVKIYGKARW RDALELWERMRSNGWPMDFILYNTLLSMCADL
Sbjct: 363  EEMVGSGVIPDAKTLTALVKIYGKARWARDALELWERMRSNGWPMDFILYNTLLSMCADL 422

Query: 160  GLEEEAERLFEDMKRSERCKPDSWSYTAMLNIYGSGGNVEKAMSMFEDMSNLG 2
            GLEEEAE+LFEDMK+SE C+PDSWSYTAMLNIYGSGGNV++AM +F++MS LG
Sbjct: 423  GLEEEAEKLFEDMKKSEHCRPDSWSYTAMLNIYGSGGNVDRAMQLFDEMSELG 475



 Score = 82.8 bits (203), Expect = 3e-13
 Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 1/222 (0%)
 Frame = -2

Query: 775 IEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWFERMYTTGLMPDEVTYSAILD 596
           I  +  EM   GV+ + + Y+T++    +      A   FE M  +G++PD  T +A++ 
Sbjct: 323 IRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGLARSLFEEMVGSGVIPDAKTLTALVK 382

Query: 595 VYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEAGDYDGIMYVLQEMK-SIGVE 419
           +Y K     + L L+ER R++GW  D I ++ L  M  + G  +    + ++MK S    
Sbjct: 383 IYGKARWARDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAEKLFEDMKKSEHCR 442

Query: 418 PNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKTLTALVKIYGKARWGRDALEL 239
           P+   Y  +L   G  G    A  LF+EM   G+  N    T L +  G+AR   D +++
Sbjct: 443 PDSWSYTAMLNIYGSGGNVDRAMQLFDEMSELGVQINVMGCTCLSQCLGRARRIDDLVKV 502

Query: 238 WERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMKRS 113
           +E     G   D  L   LLS+ +     E+A ++   ++++
Sbjct: 503 FEVSLERGVKPDDRLCGCLLSVVSFCEGAEDANKVLACLQQA 544



 Score = 74.7 bits (182), Expect = 9e-11
 Identities = 47/195 (24%), Positives = 94/195 (48%), Gaps = 1/195 (0%)
 Frame = -2

Query: 829 IFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWFER 650
           + YN  ++++    +  L   L  EM+ +GV  D  T + ++    +      A++ +ER
Sbjct: 340 VVYNTLLEAMGKAGKPGLARSLFEEMVGSGVIPDAKTLTALVKIYGKARWARDALELWER 399

Query: 649 MYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGW-KPDPIAFSVLGKMFGEAG 473
           M + G   D + Y+ +L + A LG  EE   L+E  + S   +PD  +++ +  ++G  G
Sbjct: 400 MRSNGWPMDFILYNTLLSMCADLGLEEEAEKLFEDMKKSEHCRPDSWSYTAMLNIYGSGG 459

Query: 472 DYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKTLT 293
           + D  M +  EM  +GV+ N++    L + +G+A +      +FE  +  G+ P+++   
Sbjct: 460 NVDRAMQLFDEMSELGVQINVMGCTCLSQCLGRARRIDDLVKVFEVSLERGVKPDDRLCG 519

Query: 292 ALVKIYGKARWGRDA 248
            L+ +        DA
Sbjct: 520 CLLSVVSFCEGAEDA 534


>ref|XP_004300258.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 716

 Score =  697 bits (1798), Expect = 0.0
 Identities = 349/470 (74%), Positives = 395/470 (84%), Gaps = 18/470 (3%)
 Frame = -2

Query: 1357 LHLTITHSSDRKKKHIFFSSSVLRNPTKRHTFLCNSSKSPP----NLEEPQSN------- 1211
            +H T+  +S   K+ IFF+S +   P KR T  C S+KSPP    +L  P +        
Sbjct: 7    IHFTV--NSSETKRPIFFTSPLKLIPPKRFTISCRSTKSPPKSPPDLSPPHNKNTNTTTK 64

Query: 1210 -----QSLADQLKPLSLNLLSDHSPP--QPNLLTKPKSTWANPSKPKPAVLSLQRHKRSP 1052
                 QSL+DQLKPL+   L    PP  QP +L+KPKS W NP+KPK +VLSLQR KRS 
Sbjct: 65   TKTKTQSLSDQLKPLTTTTL----PPKDQPQVLSKPKSIWVNPAKPKRSVLSLQRQKRSL 120

Query: 1051 HSYNPKLRDLKLFSKKLNDCDPTSEAEFLTTLEEIPHPPNRENALLILNSLKPWQKTHLF 872
            +SYNP++RDL+LF++KLNDC  + EA FL  LEEIPHPP RENALLILNSLKPWQKTH+F
Sbjct: 121  YSYNPQVRDLRLFAQKLNDCGSSQEA-FLAALEEIPHPPTRENALLILNSLKPWQKTHMF 179

Query: 871  FNWIKTHNLFPLETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAK 692
            FNW+KT NLFP+ETIFYNVTMKS+RFGRQFQLIE+LA +M+ NGV+LDNITYSTIITCAK
Sbjct: 180  FNWVKTQNLFPMETIFYNVTMKSMRFGRQFQLIEELAEDMVSNGVDLDNITYSTIITCAK 239

Query: 691  RCNLFDKAVDWFERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPI 512
            R  LFDKAV+WFERMY TGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGW PDPI
Sbjct: 240  RSKLFDKAVEWFERMYKTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWTPDPI 299

Query: 511  AFSVLGKMFGEAGDYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEM 332
            AFSVLGKMFGEAGDYDGI YVLQEM +IGV+PNLVVYNTLLEAMGKAGKPGLARSLFEEM
Sbjct: 300  AFSVLGKMFGEAGDYDGIRYVLQEMAAIGVKPNLVVYNTLLEAMGKAGKPGLARSLFEEM 359

Query: 331  ITSGLTPNEKTLTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLE 152
            + SGLTPNEKTLTALVKIYGKARW RDAL+LWERMRSN WPMDFILYNTLL+MCADLGLE
Sbjct: 360  VASGLTPNEKTLTALVKIYGKARWARDALDLWERMRSNKWPMDFILYNTLLNMCADLGLE 419

Query: 151  EEAERLFEDMKRSERCKPDSWSYTAMLNIYGSGGNVEKAMSMFEDMSNLG 2
            +EA+RLFEDMK+SE C+PDS+SYTAMLNI+GSGGN ++AM +FE+MS  G
Sbjct: 420  DEAKRLFEDMKQSEHCRPDSYSYTAMLNIFGSGGNADEAMELFEEMSKKG 469



 Score = 85.9 bits (211), Expect = 4e-14
 Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 1/242 (0%)
 Frame = -2

Query: 835  ETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWF 656
            + I ++V  K       +  I  +  EM   GV+ + + Y+T++    +      A   F
Sbjct: 297  DPIAFSVLGKMFGEAGDYDGIRYVLQEMAAIGVKPNLVVYNTLLEAMGKAGKPGLARSLF 356

Query: 655  ERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEA 476
            E M  +GL P+E T +A++ +Y K     + L L+ER R++ W  D I ++ L  M  + 
Sbjct: 357  EEMVASGLTPNEKTLTALVKIYGKARWARDALDLWERMRSNKWPMDFILYNTLLNMCADL 416

Query: 475  GDYDGIMYVLQEMK-SIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
            G  D    + ++MK S    P+   Y  +L   G  G    A  LFEEM   G+  N   
Sbjct: 417  GLEDEAKRLFEDMKQSEHCRPDSYSYTAMLNIFGSGGNADEAMELFEEMSKKGVHLNVMG 476

Query: 298  LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMK 119
             T L++  G+A+   D + ++      G   D  L   LLS+ +     E+ + +F  ++
Sbjct: 477  CTCLIQCLGRAKRFGDMVRVFNVAVERGVKPDDRLCGCLLSVVSLCEKTEDEDMVFSCLQ 536

Query: 118  RS 113
            ++
Sbjct: 537  QA 538


>ref|XP_007210329.1| hypothetical protein PRUPE_ppa002049mg [Prunus persica]
            gi|462406064|gb|EMJ11528.1| hypothetical protein
            PRUPE_ppa002049mg [Prunus persica]
          Length = 724

 Score =  696 bits (1795), Expect = 0.0
 Identities = 351/480 (73%), Positives = 394/480 (82%), Gaps = 20/480 (4%)
 Frame = -2

Query: 1381 STSAVELHLHLTITHSSDRKKKHIFFSSSVLRNPTKRHTFLCNSSKSPP----NLEEPQS 1214
            +TSAV    H T+  +S   K+ IFF+S   + PTKR    C S+KSPP    +L EP S
Sbjct: 3    ATSAV----HFTV--NSSETKRPIFFTSPFRQIPTKRFNLSCRSTKSPPKSPPDLAEPNS 56

Query: 1213 NQ----------------SLADQLKPLSLNLLSDHSPPQPNLLTKPKSTWANPSKPKPAV 1082
                              SL++QL+PL+   LS+    Q  LL+KPKS W NP+KPK +V
Sbjct: 57   KNNNKKNDDNNNKKNPSLSLSEQLQPLTSTTLSNPPKDQSQLLSKPKSIWVNPAKPKRSV 116

Query: 1081 LSLQRHKRSPHSYNPKLRDLKLFSKKLNDCDPTSEAEFLTTLEEIPHPPNRENALLILNS 902
            LSLQR KRS +SYNP++RDL+ F+ KLNDCD +  A FL  LEEIPHPP RENALLILNS
Sbjct: 117  LSLQRQKRSLYSYNPQVRDLRQFAHKLNDCDASQNA-FLAALEEIPHPPTRENALLILNS 175

Query: 901  LKPWQKTHLFFNWIKTHNLFPLETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNI 722
            LKPWQKTH+FFNW+K  N FP++TIFYNVTMKSLRFGRQFQLIE+LA EM+ N +ELDNI
Sbjct: 176  LKPWQKTHMFFNWVKAQNSFPMDTIFYNVTMKSLRFGRQFQLIEELAEEMVSNEIELDNI 235

Query: 721  TYSTIITCAKRCNLFDKAVDWFERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERG 542
            TYSTIITCAKR  LFDKAV+WFERMY TGLMPDEVTYSAILDVYAKLGKVEEVLSLYERG
Sbjct: 236  TYSTIITCAKRSKLFDKAVEWFERMYKTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERG 295

Query: 541  RASGWKPDPIAFSVLGKMFGEAGDYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKP 362
            RASGWKPDPIAFSVLGKMFGEAGDYDGI YVLQEM ++GV+PNLVVYNTLLEAMGKAGKP
Sbjct: 296  RASGWKPDPIAFSVLGKMFGEAGDYDGIRYVLQEMAALGVQPNLVVYNTLLEAMGKAGKP 355

Query: 361  GLARSLFEEMITSGLTPNEKTLTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTL 182
            GLARSLFEEM+ SGL PNEKTLTALVKIYGKARW RDALELWERMRSN WPMDFILYNTL
Sbjct: 356  GLARSLFEEMVGSGLKPNEKTLTALVKIYGKARWARDALELWERMRSNEWPMDFILYNTL 415

Query: 181  LSMCADLGLEEEAERLFEDMKRSERCKPDSWSYTAMLNIYGSGGNVEKAMSMFEDMSNLG 2
            L+MCADLGLEEEA++LFEDMK+SE C+PDSWSYTAMLNI+GSGGNV+ AM +FE+MS LG
Sbjct: 416  LNMCADLGLEEEAKKLFEDMKQSEHCRPDSWSYTAMLNIFGSGGNVDGAMGLFEEMSELG 475



 Score = 83.2 bits (204), Expect = 3e-13
 Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 1/242 (0%)
 Frame = -2

Query: 835  ETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWF 656
            + I ++V  K       +  I  +  EM   GV+ + + Y+T++    +      A   F
Sbjct: 303  DPIAFSVLGKMFGEAGDYDGIRYVLQEMAALGVQPNLVVYNTLLEAMGKAGKPGLARSLF 362

Query: 655  ERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEA 476
            E M  +GL P+E T +A++ +Y K     + L L+ER R++ W  D I ++ L  M  + 
Sbjct: 363  EEMVGSGLKPNEKTLTALVKIYGKARWARDALELWERMRSNEWPMDFILYNTLLNMCADL 422

Query: 475  GDYDGIMYVLQEMK-SIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
            G  +    + ++MK S    P+   Y  +L   G  G    A  LFEEM   G+  N   
Sbjct: 423  GLEEEAKKLFEDMKQSEHCRPDSWSYTAMLNIFGSGGNVDGAMGLFEEMSELGIELNVMG 482

Query: 298  LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMK 119
             T L++  GKAR   D + ++      G   D  L   LLS+ +     E+ +++   ++
Sbjct: 483  CTCLIQCLGKARRFSDMVRVFGVAVERGVKPDDRLCGCLLSVVSLCEKTEDEDKVLSCLQ 542

Query: 118  RS 113
            ++
Sbjct: 543  QA 544


>ref|XP_004148730.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
            chloroplastic-like [Cucumis sativus]
            gi|449521148|ref|XP_004167592.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g46580,
            chloroplastic-like [Cucumis sativus]
          Length = 710

 Score =  689 bits (1779), Expect = 0.0
 Identities = 340/448 (75%), Positives = 385/448 (85%), Gaps = 7/448 (1%)
 Frame = -2

Query: 1324 KKKHIFFSSSVLR-NPTKRHTFLCNSSKSP--PNLEEPQS----NQSLADQLKPLSLNLL 1166
            K   IFF+S + R N TKR T LC+SSKSP  P+    QS    N SL++QLK LS   L
Sbjct: 14   KPTPIFFTSPLRRKNVTKRLTLLCSSSKSPRKPSSVSSQSVDNKNPSLSEQLKNLSTTTL 73

Query: 1165 SDHSPPQPNLLTKPKSTWANPSKPKPAVLSLQRHKRSPHSYNPKLRDLKLFSKKLNDCDP 986
            S+    +  LL+KPKSTW NP+KPK +VLSLQR KRS +SYNPK+RDLK F+ KLN CD 
Sbjct: 74   SNAPNDETRLLSKPKSTWVNPTKPKRSVLSLQRQKRSSYSYNPKMRDLKSFAHKLNACDS 133

Query: 985  TSEAEFLTTLEEIPHPPNRENALLILNSLKPWQKTHLFFNWIKTHNLFPLETIFYNVTMK 806
            + +A F+  LEEIPHPP +ENALLILNSL+PWQKTHLFFNWIK+ NLFP+ETIFYNV MK
Sbjct: 134  SDDASFIAALEEIPHPPTKENALLILNSLRPWQKTHLFFNWIKSQNLFPMETIFYNVAMK 193

Query: 805  SLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWFERMYTTGLMP 626
            SLR+GRQFQLIEDLA+EMI  G+ELDNITYSTIITCAK+C+ FDKA++WFERMY TGLMP
Sbjct: 194  SLRYGRQFQLIEDLANEMISAGIELDNITYSTIITCAKKCSRFDKAMEWFERMYKTGLMP 253

Query: 625  DEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEAGDYDGIMYVL 446
            DEVTYSAILDVYA LGKVEEVLSLYERGRASGW PDP  FSVLGKMFGEAGDYDGIMYVL
Sbjct: 254  DEVTYSAILDVYANLGKVEEVLSLYERGRASGWTPDPYTFSVLGKMFGEAGDYDGIMYVL 313

Query: 445  QEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKTLTALVKIYGKA 266
            QEMKSI ++PNLVVYNTLL+AMGKAGKPG ARSLF+EM+ SG+TPNEKTLTALVKIYGKA
Sbjct: 314  QEMKSIEMQPNLVVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKA 373

Query: 265  RWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMKRSERCKPDSWS 86
            RW RDAL+LWERMRSNGWPMDFILYNTLL+MCADLGLEEEAE LFE+MK+S+  +PDSWS
Sbjct: 374  RWARDALDLWERMRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEEMKKSKHSRPDSWS 433

Query: 85   YTAMLNIYGSGGNVEKAMSMFEDMSNLG 2
            YTAMLNIYGSGGNV+++M +FE+M  LG
Sbjct: 434  YTAMLNIYGSGGNVKRSMELFEEMLELG 461



 Score = 76.3 bits (186), Expect = 3e-11
 Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 1/205 (0%)
 Frame = -2

Query: 724 ITYSTIITCAKRCNLFDKAVDWFERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYER 545
           + Y+T++    +      A   F+ M  +G+ P+E T +A++ +Y K     + L L+ER
Sbjct: 326 VVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWER 385

Query: 544 GRASGWKPDPIAFSVLGKMFGEAGDYDGIMYVLQEMK-SIGVEPNLVVYNTLLEAMGKAG 368
            R++GW  D I ++ L  M  + G  +    + +EMK S    P+   Y  +L   G  G
Sbjct: 386 MRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEEMKKSKHSRPDSWSYTAMLNIYGSGG 445

Query: 367 KPGLARSLFEEMITSGLTPNEKTLTALVKIYGKARWGRDALELWERMRSNGWPMDFILYN 188
               +  LFEEM+  G+  N    T L++  GK+    D + ++      G   D  L  
Sbjct: 446 NVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCG 505

Query: 187 TLLSMCADLGLEEEAERLFEDMKRS 113
            LLS+ +     E+  ++F  ++++
Sbjct: 506 CLLSVLSLCYNSEDINKVFTCLQQA 530



 Score = 75.9 bits (185), Expect = 4e-11
 Identities = 43/185 (23%), Positives = 94/185 (50%), Gaps = 1/185 (0%)
 Frame = -2

Query: 829 IFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWFER 650
           + YN  + ++    +      L  EM+++G+  +  T + ++    +      A+D +ER
Sbjct: 326 VVYNTLLDAMGKAGKPGFARSLFDEMVESGITPNEKTLTALVKIYGKARWARDALDLWER 385

Query: 649 MYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGW-KPDPIAFSVLGKMFGEAG 473
           M + G   D + Y+ +L++ A LG  EE  +L+E  + S   +PD  +++ +  ++G  G
Sbjct: 386 MRSNGWPMDFILYNTLLNMCADLGLEEEAETLFEEMKKSKHSRPDSWSYTAMLNIYGSGG 445

Query: 472 DYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKTLT 293
           +    M + +EM  +GVE N++    L++ +GK+G+      +F   +  G+ P+++   
Sbjct: 446 NVKRSMELFEEMLELGVEINVMCCTCLIQCLGKSGRIDDLVRVFNVSVQKGIKPDDRLCG 505

Query: 292 ALVKI 278
            L+ +
Sbjct: 506 CLLSV 510


>ref|XP_006385629.1| hypothetical protein POPTR_0003s08800g [Populus trichocarpa]
            gi|550342759|gb|ERP63426.1| hypothetical protein
            POPTR_0003s08800g [Populus trichocarpa]
          Length = 721

 Score =  684 bits (1766), Expect = 0.0
 Identities = 343/467 (73%), Positives = 393/467 (84%), Gaps = 13/467 (2%)
 Frame = -2

Query: 1363 LHLHLTITHSSDRKKKHIFFSSSVLRNPTKRHTFL-CNSS--------KSPPNLEEPQS- 1214
            L +H TI  S    K+ IFF+S +  NPTK+   + CNSS        K P NL E  S 
Sbjct: 9    LDVHFTIPKSDT--KRPIFFTSPIRHNPTKKRLAISCNSSTSETSSSTKPPQNLSESPSP 66

Query: 1213 -NQSLADQLKPLSLNLLS--DHSPPQPNLLTKPKSTWANPSKPKPAVLSLQRHKRSPHSY 1043
             N SL+DQLKPLS   LS  DH   +  LL+KPKSTW NP++PK +VLSLQR K+S +SY
Sbjct: 67   KNPSLSDQLKPLSATTLSTKDH---KAQLLSKPKSTWVNPTRPKRSVLSLQRQKKSLYSY 123

Query: 1042 NPKLRDLKLFSKKLNDCDPTSEAEFLTTLEEIPHPPNRENALLILNSLKPWQKTHLFFNW 863
            NP++R+LKLF+KKLNDC  + E EF + LE IP+PP RENALLILNSL+PWQKTHLFFNW
Sbjct: 124  NPQIRELKLFAKKLNDCG-SGEDEFESVLETIPYPPTRENALLILNSLRPWQKTHLFFNW 182

Query: 862  IKTHNLFPLETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCN 683
            IKT N+FP+ETIFYNVTMKSLR+G QF +IE+LA+EM+ N ++LDNITYSTIITCAK+C+
Sbjct: 183  IKTRNVFPIETIFYNVTMKSLRYGLQFDIIEELANEMVSNEIQLDNITYSTIITCAKKCS 242

Query: 682  LFDKAVDWFERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFS 503
             FDKAV+WFERMY TGLMPDEVTYSAILDVYAKLGKVEEVLSLYERG ASGWKPDPI FS
Sbjct: 243  RFDKAVEWFERMYKTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGVASGWKPDPITFS 302

Query: 502  VLGKMFGEAGDYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITS 323
            VL KMFGEAGDYDGI YVLQEMKS+GV+PNLVVYNTLLEAMGKAGKPGLARSLFEEM+ S
Sbjct: 303  VLAKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGLARSLFEEMVDS 362

Query: 322  GLTPNEKTLTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEA 143
            GLTP+EKTLTAL KIYGKARW +DA++LWERMRSN WPMDFILYNTLL+MCADLGL EEA
Sbjct: 363  GLTPSEKTLTALAKIYGKARWAKDAMDLWERMRSNNWPMDFILYNTLLNMCADLGLVEEA 422

Query: 142  ERLFEDMKRSERCKPDSWSYTAMLNIYGSGGNVEKAMSMFEDMSNLG 2
            E LFEDMKRSE+C+PDSW++TAMLNIYGSGGN +K+M +FE+MS LG
Sbjct: 423  EMLFEDMKRSEKCRPDSWTFTAMLNIYGSGGNADKSMELFEEMSKLG 469



 Score = 84.0 bits (206), Expect = 1e-13
 Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 1/242 (0%)
 Frame = -2

Query: 835  ETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWF 656
            + I ++V  K       +  I  +  EM   GV+ + + Y+T++    +      A   F
Sbjct: 297  DPITFSVLAKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGLARSLF 356

Query: 655  ERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEA 476
            E M  +GL P E T +A+  +Y K    ++ + L+ER R++ W  D I ++ L  M  + 
Sbjct: 357  EEMVDSGLTPSEKTLTALAKIYGKARWAKDAMDLWERMRSNNWPMDFILYNTLLNMCADL 416

Query: 475  GDYDGIMYVLQEMK-SIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
            G  +    + ++MK S    P+   +  +L   G  G    +  LFEEM   G+  N   
Sbjct: 417  GLVEEAEMLFEDMKRSEKCRPDSWTFTAMLNIYGSGGNADKSMELFEEMSKLGIGLNIMG 476

Query: 298  LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMK 119
             T LV+  GKAR   D ++++      G  +D      LLS+ +     E+  ++   +K
Sbjct: 477  CTCLVQCLGKARRIDDLVKVFNVAIDGGVKLDDRFCGCLLSVASLCDESEDVAKVLACLK 536

Query: 118  RS 113
            ++
Sbjct: 537  QA 538


>gb|EXB99769.1| hypothetical protein L484_023300 [Morus notabilis]
          Length = 710

 Score =  679 bits (1753), Expect = 0.0
 Identities = 342/467 (73%), Positives = 391/467 (83%), Gaps = 7/467 (1%)
 Frame = -2

Query: 1381 STSAVELHLHLTITHSSDRKKKHIFFSSSVLRN-PTKRHT-----FLCNSSKSPPNLEEP 1220
            + +A+   L + +T  SD+ K  +FF+S + R  PT   T       C +S  P N    
Sbjct: 2    ANAAISTPLDVHLTKHSDQNKS-LFFTSPLFRQIPTTTRTRTTLTISCCTSPKPRN---- 56

Query: 1219 QSNQSLADQLKPLSLNLLSDHSPPQPN-LLTKPKSTWANPSKPKPAVLSLQRHKRSPHSY 1043
            +   SL++QLKPL+   LS+    Q N LL+KPKSTW NP++PK +V+SLQR KRSPHSY
Sbjct: 57   KKTSSLSEQLKPLTTTTLSNDQEQQNNTLLSKPKSTWVNPTRPKRSVISLQRQKRSPHSY 116

Query: 1042 NPKLRDLKLFSKKLNDCDPTSEAEFLTTLEEIPHPPNRENALLILNSLKPWQKTHLFFNW 863
            NP++RDL+ F++KLN+   + EA F+ TL+EIPHPP+RENALLILNSLKPWQ T LFFNW
Sbjct: 117  NPQVRDLRRFAQKLNNSGDSEEA-FMATLKEIPHPPSRENALLILNSLKPWQNTRLFFNW 175

Query: 862  IKTHNLFPLETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCN 683
            +KT N FP+ETIFYNVTMKSLRFGRQFQLIE+LA+EMI N +ELDNITYSTIITCAKRC 
Sbjct: 176  LKTQNSFPMETIFYNVTMKSLRFGRQFQLIEELANEMIRNDIELDNITYSTIITCAKRCK 235

Query: 682  LFDKAVDWFERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFS 503
             FDKAV+WFERMY TG+MPDEVTYSAILDVYA+L KVEEVLSLYERGRASGWKPD I F+
Sbjct: 236  DFDKAVEWFERMYKTGMMPDEVTYSAILDVYAQLRKVEEVLSLYERGRASGWKPDAITFA 295

Query: 502  VLGKMFGEAGDYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITS 323
            VLGKMFGEAGD+DGI YVLQEM S+GVEPNL+VYNTLLEAMGKAGKPG+ARSLFEEMI S
Sbjct: 296  VLGKMFGEAGDFDGIRYVLQEMGSLGVEPNLIVYNTLLEAMGKAGKPGMARSLFEEMIES 355

Query: 322  GLTPNEKTLTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEA 143
            GLTPNEKTLTALVK+YGKARWGRDALELWERMRSN WP+DFILYNTLL+MCADLGLEEEA
Sbjct: 356  GLTPNEKTLTALVKVYGKARWGRDALELWERMRSNSWPVDFILYNTLLNMCADLGLEEEA 415

Query: 142  ERLFEDMKRSERCKPDSWSYTAMLNIYGSGGNVEKAMSMFEDMSNLG 2
            ERLFEDMKRSE  +PDSWSYTAMLNIYGSGG VEKAM MF++MS LG
Sbjct: 416  ERLFEDMKRSESSRPDSWSYTAMLNIYGSGGKVEKAMEMFDEMSELG 462



 Score = 90.5 bits (223), Expect = 2e-15
 Identities = 71/234 (30%), Positives = 108/234 (46%), Gaps = 4/234 (1%)
 Frame = -2

Query: 835 ETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWF 656
           + I + V  K       F  I  +  EM   GVE + I Y+T++    +      A   F
Sbjct: 290 DAITFAVLGKMFGEAGDFDGIRYVLQEMGSLGVEPNLIVYNTLLEAMGKAGKPGMARSLF 349

Query: 655 ERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEA 476
           E M  +GL P+E T +A++ VY K     + L L+ER R++ W  D I ++ L  M  + 
Sbjct: 350 EEMIESGLTPNEKTLTALVKVYGKARWGRDALELWERMRSNSWPVDFILYNTLLNMCADL 409

Query: 475 GDYDGIMYVLQEMK-SIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
           G  +    + ++MK S    P+   Y  +L   G  GK   A  +F+EM   G+  N   
Sbjct: 410 GLEEEAERLFEDMKRSESSRPDSWSYTAMLNIYGSGGKVEKAMEMFDEMSELGVELNVMG 469

Query: 298 LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLL---SMCADLGLEEE 146
            T LV+  GKA+   D + ++  +   G   D  L   LL   SMC D+G EE+
Sbjct: 470 CTCLVQCLGKAKRVDDMVRVFSFVVEKGVRPDDRLCGCLLSVVSMCDDVGDEEK 523


>ref|XP_007039546.1| Pentatricopeptide (PPR) repeat-containing protein [Theobroma cacao]
            gi|508776791|gb|EOY24047.1| Pentatricopeptide (PPR)
            repeat-containing protein [Theobroma cacao]
          Length = 711

 Score =  678 bits (1750), Expect = 0.0
 Identities = 339/459 (73%), Positives = 382/459 (83%), Gaps = 5/459 (1%)
 Frame = -2

Query: 1363 LHLHLTITHSSDRKKKHIFFSSSVLRNPTKRHTFLCNSSKS---PPNLE--EPQSNQSLA 1199
            L +H  I  S    K+ +FF+ +  +NP ++ T  CNSSKS   PP      P+   SL+
Sbjct: 9    LDVHFPIAQSDT--KRPVFFTKTKTQNPRRKFTISCNSSKSSSKPPKNPPVSPKKTPSLS 66

Query: 1198 DQLKPLSLNLLSDHSPPQPNLLTKPKSTWANPSKPKPAVLSLQRHKRSPHSYNPKLRDLK 1019
            +QL+PLS   L      Q  LL+KPKSTW NP+KPK +VLSLQR  RSP++YNPK+R+LK
Sbjct: 67   EQLQPLSTTTLPKKD--QACLLSKPKSTWVNPTKPKRSVLSLQRQTRSPYAYNPKVRELK 124

Query: 1018 LFSKKLNDCDPTSEAEFLTTLEEIPHPPNRENALLILNSLKPWQKTHLFFNWIKTHNLFP 839
            LF+KKLNDC+  SE  FL+ LEEIP  P REN LLILNSLKPWQK HLFFNWIKT NLFP
Sbjct: 125  LFAKKLNDCE-NSEDAFLSVLEEIPQQPTRENVLLILNSLKPWQKAHLFFNWIKTKNLFP 183

Query: 838  LETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDW 659
            +ETIFYNVTMKSLRFGRQF+LIE+LA+EM+ N + LDNITYSTIITCAKRC LFDKAV+W
Sbjct: 184  METIFYNVTMKSLRFGRQFELIEELANEMVSNEIPLDNITYSTIITCAKRCYLFDKAVEW 243

Query: 658  FERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGE 479
            FERMY TGLMPDEVTYSAILDVYAKLGKVEEVL+LYERG ASGWKPDPIAFSVL KMFGE
Sbjct: 244  FERMYKTGLMPDEVTYSAILDVYAKLGKVEEVLNLYERGVASGWKPDPIAFSVLAKMFGE 303

Query: 478  AGDYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
            AGDYDGI YVLQEMKS GV+PNLVVYNTLLEAMGKAGKPGLAR+LFEE++ SGLTPNEKT
Sbjct: 304  AGDYDGIRYVLQEMKSFGVQPNLVVYNTLLEAMGKAGKPGLARNLFEELLESGLTPNEKT 363

Query: 298  LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMK 119
            LTAL KIYGKARW +DALELWE M+S  WPMDFILYNTLL+MCAD+GL EEAE+LF DMK
Sbjct: 364  LTALAKIYGKARWAKDALELWEEMKSKKWPMDFILYNTLLNMCADVGLVEEAEKLFADMK 423

Query: 118  RSERCKPDSWSYTAMLNIYGSGGNVEKAMSMFEDMSNLG 2
            +SE C PDSWSYTAMLNIYGSGGNV KAM +FE+MS +G
Sbjct: 424  QSEHCGPDSWSYTAMLNIYGSGGNVGKAMELFEEMSKVG 462



 Score = 79.3 bits (194), Expect = 4e-12
 Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%)
 Frame = -2

Query: 835  ETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWF 656
            + I ++V  K       +  I  +  EM   GV+ + + Y+T++    +      A + F
Sbjct: 290  DPIAFSVLAKMFGEAGDYDGIRYVLQEMKSFGVQPNLVVYNTLLEAMGKAGKPGLARNLF 349

Query: 655  ERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEA 476
            E +  +GL P+E T +A+  +Y K    ++ L L+E  ++  W  D I ++ L  M  + 
Sbjct: 350  EELLESGLTPNEKTLTALAKIYGKARWAKDALELWEEMKSKKWPMDFILYNTLLNMCADV 409

Query: 475  GDYDGIMYVLQEMK-SIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
            G  +    +  +MK S    P+   Y  +L   G  G  G A  LFEEM   G+  N   
Sbjct: 410  GLVEEAEKLFADMKQSEHCGPDSWSYTAMLNIYGSGGNVGKAMELFEEMSKVGVELNVMG 469

Query: 298  LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMK 119
             T L++  GKAR   + + ++      G   D  L   LLS+ +     E+ +++   ++
Sbjct: 470  STCLIQCLGKARRMDELVRVFSVSVEQGIKPDDRLCGCLLSVVSLCEKREDMDKVLACLQ 529

Query: 118  RS 113
            ++
Sbjct: 530  QA 531


>ref|XP_006485434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
            chloroplastic-like [Citrus sinensis]
          Length = 730

 Score =  674 bits (1739), Expect = 0.0
 Identities = 339/459 (73%), Positives = 384/459 (83%), Gaps = 5/459 (1%)
 Frame = -2

Query: 1363 LHLHLTITHSSDRKKKHIFFSSSVLRNPTKRHTFLCNSSKSPPNLEEPQSNQ-----SLA 1199
            L +HL+I  S    K+ IF +    R+   +    CNS KS  N+     N      SL+
Sbjct: 29   LDVHLSIPKSDT--KRPIFLTKPTQRSHPIKINISCNS-KSSENVAAESPNPETKTLSLS 85

Query: 1198 DQLKPLSLNLLSDHSPPQPNLLTKPKSTWANPSKPKPAVLSLQRHKRSPHSYNPKLRDLK 1019
            +QLKPLS   LS     +  LL+KPKSTW NP+KP+ +VLSLQR KRS +SYNP++RDLK
Sbjct: 86   EQLKPLSSTTLSPTKNDRTPLLSKPKSTWVNPTKPRRSVLSLQRQKRSTYSYNPRVRDLK 145

Query: 1018 LFSKKLNDCDPTSEAEFLTTLEEIPHPPNRENALLILNSLKPWQKTHLFFNWIKTHNLFP 839
            LF++KLNDCD T EA FL  + EIPH P RENALLILNSLK WQK++ FFNWIK+ NLFP
Sbjct: 146  LFARKLNDCDNTEEA-FLRAITEIPHQPTRENALLILNSLKFWQKSYFFFNWIKSQNLFP 204

Query: 838  LETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDW 659
            +ETIFYNVTMKSLRFGRQFQLIE LA+EM+ N +ELDNITYSTIITCAKRCNLFD+A++W
Sbjct: 205  METIFYNVTMKSLRFGRQFQLIEQLANEMVSNEIELDNITYSTIITCAKRCNLFDEAIEW 264

Query: 658  FERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGE 479
            FERMY TGLMPDEVTYSAILDVYAK GKVEEVLSLYERG ASGWKPDPIAFSVLGKMFGE
Sbjct: 265  FERMYKTGLMPDEVTYSAILDVYAKSGKVEEVLSLYERGVASGWKPDPIAFSVLGKMFGE 324

Query: 478  AGDYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
            +GDYDGI YVLQEMKS+GV+PNLVVYNTLLEAMGKAGKPGLARSLF+EM+ SGLTP+EKT
Sbjct: 325  SGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGLARSLFDEMVESGLTPDEKT 384

Query: 298  LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMK 119
            LTAL+KIYGKARW +DALELWERMR N WPMDFILYNTLL+MCAD+GL EEAERLFEDMK
Sbjct: 385  LTALIKIYGKARWAKDALELWERMRENKWPMDFILYNTLLNMCADIGLVEEAERLFEDMK 444

Query: 118  RSERCKPDSWSYTAMLNIYGSGGNVEKAMSMFEDMSNLG 2
             SE CKPDS+SYTAMLNIYGSGGNV+KA+ +FE+MS LG
Sbjct: 445  LSEYCKPDSYSYTAMLNIYGSGGNVDKAIELFEEMSKLG 483



 Score = 84.7 bits (208), Expect = 9e-14
 Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 1/242 (0%)
 Frame = -2

Query: 835  ETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWF 656
            + I ++V  K       +  I  +  EM   GV+ + + Y+T++    +      A   F
Sbjct: 311  DPIAFSVLGKMFGESGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGLARSLF 370

Query: 655  ERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEA 476
            + M  +GL PDE T +A++ +Y K    ++ L L+ER R + W  D I ++ L  M  + 
Sbjct: 371  DEMVESGLTPDEKTLTALIKIYGKARWAKDALELWERMRENKWPMDFILYNTLLNMCADI 430

Query: 475  GDYDGIMYVLQEMK-SIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
            G  +    + ++MK S   +P+   Y  +L   G  G    A  LFEEM   G+  N   
Sbjct: 431  GLVEEAERLFEDMKLSEYCKPDSYSYTAMLNIYGSGGNVDKAIELFEEMSKLGVAVNVMG 490

Query: 298  LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMK 119
             T L++  GKAR   D + ++      G   D  L   LLS+ +     E+ +++   ++
Sbjct: 491  CTCLIQCLGKARRIDDLVRVFGVSIDRGVKPDDRLCGCLLSVVSLCVTSEDVDKVITCLQ 550

Query: 118  RS 113
            ++
Sbjct: 551  QA 552


>ref|XP_004245879.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
            chloroplastic-like [Solanum lycopersicum]
          Length = 711

 Score =  674 bits (1739), Expect = 0.0
 Identities = 341/470 (72%), Positives = 396/470 (84%), Gaps = 6/470 (1%)
 Frame = -2

Query: 1393 SSTFSTSAVELHLHLTITHSSDRKKKHIFFSSSVL--RNPTKRHTFLCNS-SKSP-PNLE 1226
            ++ FST    L +H +I ++SD K  +   SSS    R   KR T LCNS SKSP PNL+
Sbjct: 2    AAKFSTG---LDIHCSIPYTSDTKLLYGSSSSSTKSSRLSIKRFTVLCNSTSKSPKPNLD 58

Query: 1225 EPQSNQ--SLADQLKPLSLNLLSDHSPPQPNLLTKPKSTWANPSKPKPAVLSLQRHKRSP 1052
               S +  SL++QLKPLS N + D  P Q  +L+KPKSTW NP++PKP+VLSLQR KRS 
Sbjct: 59   LDSSRKKPSLSEQLKPLS-NTILDDPPNQARILSKPKSTWVNPTRPKPSVLSLQRQKRSS 117

Query: 1051 HSYNPKLRDLKLFSKKLNDCDPTSEAEFLTTLEEIPHPPNRENALLILNSLKPWQKTHLF 872
            +SYNP++RDLK F+++L++   + +A FL  LE+IPHPP R+NALL+LNSL+PWQKT  F
Sbjct: 118  YSYNPQIRDLKNFARRLSESHFSDDA-FLAVLEDIPHPPTRDNALLVLNSLRPWQKTLFF 176

Query: 871  FNWIKTHNLFPLETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAK 692
            FNWIKT NLFPLETIFYNV MKSLRFGRQF  IE+LA EMID+GVELDNITYSTIITCAK
Sbjct: 177  FNWIKTRNLFPLETIFYNVAMKSLRFGRQFHQIEELAFEMIDSGVELDNITYSTIITCAK 236

Query: 691  RCNLFDKAVDWFERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPI 512
            RCNLFDKAV+WFERMY TGLMPDEVTYSA+LDVYA+LGKVEEV+SLYERGRASGW PDP+
Sbjct: 237  RCNLFDKAVEWFERMYKTGLMPDEVTYSAVLDVYAQLGKVEEVMSLYERGRASGWTPDPV 296

Query: 511  AFSVLGKMFGEAGDYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEM 332
            AF+VL K+FG AGDYDGI +VLQEMK++ V+PNLVVYNTLLEAMGKAGKPGLARSLFEEM
Sbjct: 297  AFAVLAKVFGAAGDYDGIRFVLQEMKALEVQPNLVVYNTLLEAMGKAGKPGLARSLFEEM 356

Query: 331  ITSGLTPNEKTLTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLE 152
            + SGLTP+ KTLTAL+KIYGKARW RDAL+LWERM+SNGWPMDFILYNTLLSMCADLGLE
Sbjct: 357  VDSGLTPDAKTLTALIKIYGKARWARDALDLWERMKSNGWPMDFILYNTLLSMCADLGLE 416

Query: 151  EEAERLFEDMKRSERCKPDSWSYTAMLNIYGSGGNVEKAMSMFEDMSNLG 2
            EEAE LF DM+RSE C+ DSWSYTAMLNIYGS GN EKAM++FE+MS +G
Sbjct: 417  EEAETLFHDMRRSENCRLDSWSYTAMLNIYGSVGNAEKAMALFEEMSKVG 466



 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 1/222 (0%)
 Frame = -2

Query: 835 ETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWF 656
           + + + V  K       +  I  +  EM    V+ + + Y+T++    +      A   F
Sbjct: 294 DPVAFAVLAKVFGAAGDYDGIRFVLQEMKALEVQPNLVVYNTLLEAMGKAGKPGLARSLF 353

Query: 655 ERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEA 476
           E M  +GL PD  T +A++ +Y K     + L L+ER +++GW  D I ++ L  M  + 
Sbjct: 354 EEMVDSGLTPDAKTLTALIKIYGKARWARDALDLWERMKSNGWPMDFILYNTLLSMCADL 413

Query: 475 GDYDGIMYVLQEMK-SIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
           G  +    +  +M+ S     +   Y  +L   G  G    A +LFEEM   G+  N   
Sbjct: 414 GLEEEAETLFHDMRRSENCRLDSWSYTAMLNIYGSVGNAEKAMALFEEMSKVGIELNVMG 473

Query: 298 LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSM 173
            T LV+ +G+A+   D ++++E     G   D  L   LLS+
Sbjct: 474 CTCLVQCFGRAQRIDDLVKVFEVSVQRGVKPDDRLCGCLLSV 515



 Score = 75.5 bits (184), Expect = 5e-11
 Identities = 47/195 (24%), Positives = 98/195 (50%), Gaps = 1/195 (0%)
 Frame = -2

Query: 829 IFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWFER 650
           + YN  ++++    +  L   L  EM+D+G+  D  T + +I    +      A+D +ER
Sbjct: 331 VVYNTLLEAMGKAGKPGLARSLFEEMVDSGLTPDAKTLTALIKIYGKARWARDALDLWER 390

Query: 649 MYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLY-ERGRASGWKPDPIAFSVLGKMFGEAG 473
           M + G   D + Y+ +L + A LG  EE  +L+ +  R+   + D  +++ +  ++G  G
Sbjct: 391 MKSNGWPMDFILYNTLLSMCADLGLEEEAETLFHDMRRSENCRLDSWSYTAMLNIYGSVG 450

Query: 472 DYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKTLT 293
           + +  M + +EM  +G+E N++    L++  G+A +      +FE  +  G+ P+++   
Sbjct: 451 NAEKAMALFEEMSKVGIELNVMGCTCLVQCFGRAQRIDDLVKVFEVSVQRGVKPDDRLCG 510

Query: 292 ALVKIYGKARWGRDA 248
            L+ +    + G DA
Sbjct: 511 CLLSVVSYCK-GDDA 524


>ref|XP_006352838.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
            chloroplastic-like [Solanum tuberosum]
          Length = 711

 Score =  674 bits (1738), Expect = 0.0
 Identities = 339/470 (72%), Positives = 397/470 (84%), Gaps = 6/470 (1%)
 Frame = -2

Query: 1393 SSTFSTSAVELHLHLTITHSSDRKKKHIFFSSSVL--RNPTKRHTFLCNS-SKSP-PNLE 1226
            ++ FST    L +H +I ++SD K  +   SSS    R   KR T LCNS SKSP PNL+
Sbjct: 2    AAKFSTG---LDIHCSIPYTSDTKLLYGSSSSSTKSSRLSLKRFTILCNSTSKSPKPNLD 58

Query: 1225 EPQSNQ--SLADQLKPLSLNLLSDHSPPQPNLLTKPKSTWANPSKPKPAVLSLQRHKRSP 1052
               S +  SL++QLKPLS N + D  P Q  +L+KPKSTW NP++PKP+VLSLQR KRS 
Sbjct: 59   LDSSRKKPSLSEQLKPLS-NTILDDPPNQARILSKPKSTWVNPTRPKPSVLSLQRQKRSS 117

Query: 1051 HSYNPKLRDLKLFSKKLNDCDPTSEAEFLTTLEEIPHPPNRENALLILNSLKPWQKTHLF 872
            +SYNP++RDLK F+++L++   + +A FL  LE+IPHPP R+NALL+LNSL+PWQKT  F
Sbjct: 118  YSYNPQIRDLKNFARRLSESHFSDDA-FLAVLEDIPHPPTRDNALLVLNSLRPWQKTIFF 176

Query: 871  FNWIKTHNLFPLETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAK 692
            FNWIKT NLFPLETIFYNV MKSLRFGRQFQ IE+LA EMID+G+ELDNITYSTIITCAK
Sbjct: 177  FNWIKTRNLFPLETIFYNVAMKSLRFGRQFQQIEELAFEMIDSGIELDNITYSTIITCAK 236

Query: 691  RCNLFDKAVDWFERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPI 512
            RCNLFDKAV+WFERMY TGLMPDEVTYSA+LDVYA+LGKVEEV+SLYERGRASGW PDP+
Sbjct: 237  RCNLFDKAVEWFERMYKTGLMPDEVTYSAVLDVYAQLGKVEEVMSLYERGRASGWTPDPV 296

Query: 511  AFSVLGKMFGEAGDYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEM 332
            AF+VL K+FG AGDYDGI +VLQEMK++ V+PNLVVYNTLLEAMGKAGKPGLARSLFEEM
Sbjct: 297  AFAVLAKVFGAAGDYDGIRFVLQEMKALEVQPNLVVYNTLLEAMGKAGKPGLARSLFEEM 356

Query: 331  ITSGLTPNEKTLTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLE 152
            + SGLTP+ KTLTAL+KIYGKARW RDAL+LWERM+SNGWPMDFILYNTLLSMCADLGLE
Sbjct: 357  VDSGLTPDAKTLTALIKIYGKARWARDALDLWERMKSNGWPMDFILYNTLLSMCADLGLE 416

Query: 151  EEAERLFEDMKRSERCKPDSWSYTAMLNIYGSGGNVEKAMSMFEDMSNLG 2
            EEAE LF DM++S+ C+ DSWSYTAMLNIYGS GN EKAM++FE+MS +G
Sbjct: 417  EEAETLFHDMRKSDNCRLDSWSYTAMLNIYGSVGNAEKAMALFEEMSRVG 466



 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 1/222 (0%)
 Frame = -2

Query: 835 ETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWF 656
           + + + V  K       +  I  +  EM    V+ + + Y+T++    +      A   F
Sbjct: 294 DPVAFAVLAKVFGAAGDYDGIRFVLQEMKALEVQPNLVVYNTLLEAMGKAGKPGLARSLF 353

Query: 655 ERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEA 476
           E M  +GL PD  T +A++ +Y K     + L L+ER +++GW  D I ++ L  M  + 
Sbjct: 354 EEMVDSGLTPDAKTLTALIKIYGKARWARDALDLWERMKSNGWPMDFILYNTLLSMCADL 413

Query: 475 GDYDGIMYVLQEM-KSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
           G  +    +  +M KS     +   Y  +L   G  G    A +LFEEM   G+  N   
Sbjct: 414 GLEEEAETLFHDMRKSDNCRLDSWSYTAMLNIYGSVGNAEKAMALFEEMSRVGIELNVMG 473

Query: 298 LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSM 173
            T LV+ +G+A+   D ++++E     G   D  L   LLS+
Sbjct: 474 CTCLVQCFGRAQRIDDLVKVFEISVQRGVKPDDRLCGCLLSV 515



 Score = 73.9 bits (180), Expect = 2e-10
 Identities = 48/195 (24%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
 Frame = -2

Query: 829 IFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWFER 650
           + YN  ++++    +  L   L  EM+D+G+  D  T + +I    +      A+D +ER
Sbjct: 331 VVYNTLLEAMGKAGKPGLARSLFEEMVDSGLTPDAKTLTALIKIYGKARWARDALDLWER 390

Query: 649 MYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRAS-GWKPDPIAFSVLGKMFGEAG 473
           M + G   D + Y+ +L + A LG  EE  +L+   R S   + D  +++ +  ++G  G
Sbjct: 391 MKSNGWPMDFILYNTLLSMCADLGLEEEAETLFHDMRKSDNCRLDSWSYTAMLNIYGSVG 450

Query: 472 DYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKTLT 293
           + +  M + +EM  +G+E N++    L++  G+A +      +FE  +  G+ P+++   
Sbjct: 451 NAEKAMALFEEMSRVGIELNVMGCTCLVQCFGRAQRIDDLVKVFEISVQRGVKPDDRLCG 510

Query: 292 ALVKIYGKARWGRDA 248
            L+ +    + G DA
Sbjct: 511 CLLSVVSYCK-GDDA 524


>gb|EYU38385.1| hypothetical protein MIMGU_mgv1a002010mg [Mimulus guttatus]
          Length = 726

 Score =  657 bits (1695), Expect = 0.0
 Identities = 326/468 (69%), Positives = 385/468 (82%), Gaps = 10/468 (2%)
 Frame = -2

Query: 1375 SAVELHLHLTITHSSDRKKKHIFFSSSVLRNPTKRHTFLCNSSK---SPPNLEEPQS--- 1214
            S    H H    HS       + F++ +L    KR T  CNS+K   +PP    P +   
Sbjct: 8    SLAPYHHHHHHHHSDTNHHLPLHFTTLLLLPTKKRFTISCNSAKRAAAPPPPPPPSAVAQ 67

Query: 1213 ---NQSLADQLKPLSLNLLSDHSPPQPNLLTKPKSTWANPSKPKPAVLSLQRHKRSP-HS 1046
                 SLA+QLKPLS   LSD  P + +LL+KPKSTW NP+KPKP+VLSLQRH+RS  +S
Sbjct: 68   DPKTPSLAEQLKPLSTTTLSDQ-PNETHLLSKPKSTWVNPTKPKPSVLSLQRHQRSASYS 126

Query: 1045 YNPKLRDLKLFSKKLNDCDPTSEAEFLTTLEEIPHPPNRENALLILNSLKPWQKTHLFFN 866
            YNP+++DL+ F+KKLN+C   +E++F   ++ IPH P+RENALL+LN+L+PWQK  LFFN
Sbjct: 127  YNPQIKDLRQFAKKLNEC---TESDFSAVIQTIPHSPSRENALLVLNNLRPWQKALLFFN 183

Query: 865  WIKTHNLFPLETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRC 686
            W+K+ ++FP+ETIFYNV MKSLRFGRQFQ IE+LA EM++ G+ LDNITYSTIITCAKRC
Sbjct: 184  WLKSQDVFPMETIFYNVAMKSLRFGRQFQHIEELALEMVEKGIVLDNITYSTIITCAKRC 243

Query: 685  NLFDKAVDWFERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAF 506
            NLFDKAV+WFERMY TGLMPDEVTYSA+LDVYAKLGKVEEV+SLYERGRASGWKPD IAF
Sbjct: 244  NLFDKAVEWFERMYKTGLMPDEVTYSAVLDVYAKLGKVEEVMSLYERGRASGWKPDSIAF 303

Query: 505  SVLGKMFGEAGDYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMIT 326
            +VL KMFGEAGDYDGI YVLQEMK++G++PNLVVYNTLLEAMGKAGKPGLARSLFEEM+ 
Sbjct: 304  AVLAKMFGEAGDYDGIRYVLQEMKTLGLQPNLVVYNTLLEAMGKAGKPGLARSLFEEMVD 363

Query: 325  SGLTPNEKTLTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEE 146
            SG+ PNEKTLTALVKIYG+ARW RDALELWERMR  GWP+DFILYNTLLSMCADLGL +E
Sbjct: 364  SGIVPNEKTLTALVKIYGRARWARDALELWERMRLKGWPVDFILYNTLLSMCADLGLVDE 423

Query: 145  AERLFEDMKRSERCKPDSWSYTAMLNIYGSGGNVEKAMSMFEDMSNLG 2
            AERLF+DMK SE+ KPDSWSYTAMLNIYGSGG+V+KAM +F++MS  G
Sbjct: 424  AERLFDDMKASEKHKPDSWSYTAMLNIYGSGGSVDKAMDLFKEMSEKG 471



 Score = 82.4 bits (202), Expect = 4e-13
 Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 1/222 (0%)
 Frame = -2

Query: 835 ETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWF 656
           ++I + V  K       +  I  +  EM   G++ + + Y+T++    +      A   F
Sbjct: 299 DSIAFAVLAKMFGEAGDYDGIRYVLQEMKTLGLQPNLVVYNTLLEAMGKAGKPGLARSLF 358

Query: 655 ERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEA 476
           E M  +G++P+E T +A++ +Y +     + L L+ER R  GW  D I ++ L  M  + 
Sbjct: 359 EEMVDSGIVPNEKTLTALVKIYGRARWARDALELWERMRLKGWPVDFILYNTLLSMCADL 418

Query: 475 GDYDGIMYVLQEMK-SIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
           G  D    +  +MK S   +P+   Y  +L   G  G    A  LF+EM   G+  N   
Sbjct: 419 GLVDEAERLFDDMKASEKHKPDSWSYTAMLNIYGSGGSVDKAMDLFKEMSEKGVGLNVMG 478

Query: 298 LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSM 173
            T L++  G+A+   D + +++   S G   D  L   LLS+
Sbjct: 479 CTCLIQCLGRAKKIDDLVRVFQTATSAGVKTDDRLCGCLLSV 520


>ref|XP_004509010.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
            chloroplastic-like [Cicer arietinum]
          Length = 706

 Score =  654 bits (1688), Expect = 0.0
 Identities = 318/432 (73%), Positives = 368/432 (85%), Gaps = 2/432 (0%)
 Frame = -2

Query: 1291 LRNPT-KRHT-FLCNSSKSPPNLEEPQSNQSLADQLKPLSLNLLSDHSPPQPNLLTKPKS 1118
            +  PT K H  F+ + SKS  ++ + Q N SL++QL  LS   LS H   Q ++ +KPK 
Sbjct: 25   ITTPTLKNHRRFITSCSKSKSSIPDDQKNSSLSEQLVSLSNTTLSTHPEDQAHVFSKPKP 84

Query: 1117 TWANPSKPKPAVLSLQRHKRSPHSYNPKLRDLKLFSKKLNDCDPTSEAEFLTTLEEIPHP 938
            TW NP+K K  VLS QRHKRS  SYNP LR+ + F+ KLN+CD +SEA+F+  LEEIP  
Sbjct: 85   TWINPTKAKRPVLSHQRHKRSSVSYNPHLREFQRFASKLNNCDVSSEADFVACLEEIPSS 144

Query: 937  PNRENALLILNSLKPWQKTHLFFNWIKTHNLFPLETIFYNVTMKSLRFGRQFQLIEDLAH 758
              RENALL+LN+LKPWQKT+ F +W+KT+NL P+ETIFYNVTMK+LRFGRQF +IE+LAH
Sbjct: 145  LTRENALLVLNNLKPWQKTYKFLDWVKTNNLLPMETIFYNVTMKALRFGRQFGIIEELAH 204

Query: 757  EMIDNGVELDNITYSTIITCAKRCNLFDKAVDWFERMYTTGLMPDEVTYSAILDVYAKLG 578
            +MIDNGVELDNITYSTII+CAK+CNLFDKAV WFERMY TGLMPDEVTYSAILDVYA+LG
Sbjct: 205  QMIDNGVELDNITYSTIISCAKKCNLFDKAVHWFERMYKTGLMPDEVTYSAILDVYARLG 264

Query: 577  KVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEAGDYDGIMYVLQEMKSIGVEPNLVVYN 398
            KVEEV+SLYERGRA+GWKPDPI FSVLGKMFGEAGDYDGI YVLQEMKS+GV+PNLVVYN
Sbjct: 265  KVEEVVSLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYN 324

Query: 397  TLLEAMGKAGKPGLARSLFEEMITSGLTPNEKTLTALVKIYGKARWGRDALELWERMRSN 218
            TLLEAMGKAGKPG ARSLFEEMI SG+ PNEKTLTA++KIYGKARW RDALELW+RM+ N
Sbjct: 325  TLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSRDALELWKRMKEN 384

Query: 217  GWPMDFILYNTLLSMCADLGLEEEAERLFEDMKRSERCKPDSWSYTAMLNIYGSGGNVEK 38
            GWPMDFILYNTLL+MCAD+GL EEAE LF DMK+SE C+PDSWSYTAMLNIYGS G+V+K
Sbjct: 385  GWPMDFILYNTLLNMCADVGLVEEAETLFGDMKQSEYCQPDSWSYTAMLNIYGSQGDVDK 444

Query: 37   AMSMFEDMSNLG 2
            AM +FE+MS LG
Sbjct: 445  AMKLFEEMSKLG 456



 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 61/242 (25%), Positives = 110/242 (45%), Gaps = 1/242 (0%)
 Frame = -2

Query: 835  ETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWF 656
            + I ++V  K       +  I  +  EM   GV+ + + Y+T++    +      A   F
Sbjct: 284  DPITFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLF 343

Query: 655  ERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEA 476
            E M  +G+ P+E T +A++ +Y K     + L L++R + +GW  D I ++ L  M  + 
Sbjct: 344  EEMIDSGIAPNEKTLTAVIKIYGKARWSRDALELWKRMKENGWPMDFILYNTLLNMCADV 403

Query: 475  GDYDGIMYVLQEMK-SIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
            G  +    +  +MK S   +P+   Y  +L   G  G    A  LFEEM   G+  N   
Sbjct: 404  GLVEEAETLFGDMKQSEYCQPDSWSYTAMLNIYGSQGDVDKAMKLFEEMSKLGIELNVMG 463

Query: 298  LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMK 119
             T L++  GKA    D + +++     G   D  L   LLS+ +     ++ E++   ++
Sbjct: 464  CTCLIQCLGKAMQIDDLVRVFDISIERGIRSDDRLCGCLLSVVSMSQGSKDEEKVLACLQ 523

Query: 118  RS 113
            R+
Sbjct: 524  RA 525


>ref|XP_002863397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297309232|gb|EFH39656.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 711

 Score =  647 bits (1668), Expect = 0.0
 Identities = 318/467 (68%), Positives = 382/467 (81%), Gaps = 4/467 (0%)
 Frame = -2

Query: 1390 STFSTSAVELHLHLTITHSSDRKKKHIFFSSSVLRNP-TKRHTFLCNSSKSPPNLEEPQ- 1217
            +T  T+A+++  +     +SD KK  +F   S+LR   T++    C+S K P  LEE   
Sbjct: 2    ATVLTTAIDVCFN---PQNSDTKKHSLFLKPSLLRQSRTRKLNISCSSLKQPKTLEEEPI 58

Query: 1216 --SNQSLADQLKPLSLNLLSDHSPPQPNLLTKPKSTWANPSKPKPAVLSLQRHKRSPHSY 1043
                 SL++QLKPLS   L      Q  +L+KPKS W NP++PK +VLSLQR KRS +SY
Sbjct: 59   TTKTPSLSEQLKPLSATTLRQE---QTQILSKPKSVWVNPTRPKRSVLSLQRQKRSAYSY 115

Query: 1042 NPKLRDLKLFSKKLNDCDPTSEAEFLTTLEEIPHPPNRENALLILNSLKPWQKTHLFFNW 863
            NP+++DL+ F++KLN  + T ++EFL+ L+EIPHPP+R+NALL+LNSL+ WQKTH FFNW
Sbjct: 116  NPQIKDLRAFAQKLNSSNFTEKSEFLSLLDEIPHPPDRDNALLVLNSLREWQKTHTFFNW 175

Query: 862  IKTHNLFPLETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCN 683
            +K+ NLFP+ETIFYNVTMKSLRFGRQF LIE++A EM+ +GVELDNITYSTIITCAKRCN
Sbjct: 176  VKSKNLFPMETIFYNVTMKSLRFGRQFYLIEEMALEMVKDGVELDNITYSTIITCAKRCN 235

Query: 682  LFDKAVDWFERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFS 503
             +DKA++WFERMY TGLMPDEVTYSAILDVY+KL KVEEVLSLYER  A+GWKPD IAFS
Sbjct: 236  FYDKAIEWFERMYKTGLMPDEVTYSAILDVYSKLRKVEEVLSLYERAVATGWKPDAIAFS 295

Query: 502  VLGKMFGEAGDYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITS 323
            VLGKMFGEAGDYDGI YVLQEMKS+ V+PN+VVYNTLLEAMG+AGKPGLARSLF EM+ +
Sbjct: 296  VLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEA 355

Query: 322  GLTPNEKTLTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEA 143
            GLTPNEKTLTALVKIYGKARW +DAL+LWE M++  WPMDFILYNTLL+MCAD+GLEEEA
Sbjct: 356  GLTPNEKTLTALVKIYGKARWAKDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEA 415

Query: 142  ERLFEDMKRSERCKPDSWSYTAMLNIYGSGGNVEKAMSMFEDMSNLG 2
            ERLF DMK S +CKPD++SYTAMLNIYGSGG  EKAM +FE+M   G
Sbjct: 416  ERLFNDMKESVQCKPDNFSYTAMLNIYGSGGKAEKAMKLFEEMLEAG 462



 Score = 92.4 bits (228), Expect = 4e-16
 Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 1/244 (0%)
 Frame = -2

Query: 835  ETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWF 656
            + I ++V  K       +  I  +  EM    V+ + + Y+T++    R      A   F
Sbjct: 290  DAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLF 349

Query: 655  ERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEA 476
              M   GL P+E T +A++ +Y K    ++ L L+E  +A  W  D I ++ L  M  + 
Sbjct: 350  NEMLEAGLTPNEKTLTALVKIYGKARWAKDALQLWEEMKAKKWPMDFILYNTLLNMCADI 409

Query: 475  GDYDGIMYVLQEMK-SIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
            G  +    +  +MK S+  +P+   Y  +L   G  GK   A  LFEEM+ +G+  N   
Sbjct: 410  GLEEEAERLFNDMKESVQCKPDNFSYTAMLNIYGSGGKAEKAMKLFEEMLEAGVQVNVMG 469

Query: 298  LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMK 119
             T LV+  GKA+   D + +++     G   D  L   LLS+ A     E+AE++   ++
Sbjct: 470  CTCLVQCLGKAKRIDDLVYVFDLSIQRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLE 529

Query: 118  RSER 107
            R+ R
Sbjct: 530  RANR 533


>ref|XP_003608637.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355509692|gb|AES90834.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 715

 Score =  647 bits (1668), Expect = 0.0
 Identities = 316/429 (73%), Positives = 362/429 (84%), Gaps = 8/429 (1%)
 Frame = -2

Query: 1264 FLCNSSKS-------PPNLEEPQSNQSLADQLKPLSLNLLSDHSPPQPNLLTKPKSTWAN 1106
            FL +SSKS       PPN    + N SL+DQL  L+   LS     QP +L+KPK TW N
Sbjct: 38   FLISSSKSIPDSETTPPNNNNNKKNSSLSDQLASLANTTLSTVPENQPKVLSKPKPTWVN 97

Query: 1105 PSKPKPAVLSLQRHKRSPHSYNPKLRDLKLFSKKLNDCD-PTSEAEFLTTLEEIPHPPNR 929
            P+K K  VLS QRHKRS  SYNP+LR+ + F+++LN+CD  +S+ EF+  LEEIP    R
Sbjct: 98   PTKTKRPVLSHQRHKRSSVSYNPQLREFQRFAQRLNNCDVSSSDEEFMVCLEEIPSSLTR 157

Query: 928  ENALLILNSLKPWQKTHLFFNWIKTHNLFPLETIFYNVTMKSLRFGRQFQLIEDLAHEMI 749
             NALL+LNSL+PWQKTH+FFNWIKT NL P+ETIFYNVTMKSLRFGRQF +IE+LAH+MI
Sbjct: 158  GNALLVLNSLRPWQKTHMFFNWIKTQNLLPMETIFYNVTMKSLRFGRQFGIIEELAHQMI 217

Query: 748  DNGVELDNITYSTIITCAKRCNLFDKAVDWFERMYTTGLMPDEVTYSAILDVYAKLGKVE 569
            D GVELDNITYSTII+CAK+CNLFDKAV WFERMY TGLMPDEVT+SAILDVYA+LGKVE
Sbjct: 218  DGGVELDNITYSTIISCAKKCNLFDKAVYWFERMYKTGLMPDEVTFSAILDVYARLGKVE 277

Query: 568  EVLSLYERGRASGWKPDPIAFSVLGKMFGEAGDYDGIMYVLQEMKSIGVEPNLVVYNTLL 389
            EV++L+ERGRA+GWKPDPI FSVLGKMFGEAGDYDGI YVLQEMKS+GV+PNLVVYNTLL
Sbjct: 278  EVVNLFERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLL 337

Query: 388  EAMGKAGKPGLARSLFEEMITSGLTPNEKTLTALVKIYGKARWGRDALELWERMRSNGWP 209
            EAMGKAGKPG ARSLFEEMI SG+ PNEKTLTA++KIYGKARW +DALELW+RM+ NGWP
Sbjct: 338  EAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMKENGWP 397

Query: 208  MDFILYNTLLSMCADLGLEEEAERLFEDMKRSERCKPDSWSYTAMLNIYGSGGNVEKAMS 29
            MDFILYNTLL+MCAD+GL EEAE LF DMK+SE CKPDSWSYTAMLNIYGS G V+KAM 
Sbjct: 398  MDFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMK 457

Query: 28   MFEDMSNLG 2
            +FE+MS  G
Sbjct: 458  LFEEMSKFG 466



 Score = 81.3 bits (199), Expect = 1e-12
 Identities = 61/242 (25%), Positives = 113/242 (46%), Gaps = 1/242 (0%)
 Frame = -2

Query: 835  ETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWF 656
            + I ++V  K       +  I  +  EM   GV+ + + Y+T++    +      A   F
Sbjct: 294  DPITFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLF 353

Query: 655  ERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEA 476
            E M  +G+ P+E T +A++ +Y K    ++ L L++R + +GW  D I ++ L  M  + 
Sbjct: 354  EEMIDSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMKENGWPMDFILYNTLLNMCADV 413

Query: 475  GDYDGIMYVLQEMK-SIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
            G  +    + ++MK S   +P+   Y  +L   G  G    A  LFEEM   G+  N   
Sbjct: 414  GLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMKLFEEMSKFGIELNVMG 473

Query: 298  LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMK 119
             T L++  GKA    D +++++     G   D  L   LLS+ +     ++ E++   ++
Sbjct: 474  CTCLIQCLGKAMEIDDLVKVFDISVERGVKPDDRLCGCLLSVVSLSQGSKDQEKVLACLQ 533

Query: 118  RS 113
            R+
Sbjct: 534  RA 535


>ref|NP_199470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75180372|sp|Q9LS25.1|PP420_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g46580, chloroplastic; Flags: Precursor
            gi|8885599|dbj|BAA97529.1| unnamed protein product
            [Arabidopsis thaliana] gi|332008017|gb|AED95400.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 711

 Score =  644 bits (1661), Expect = 0.0
 Identities = 318/467 (68%), Positives = 380/467 (81%), Gaps = 4/467 (0%)
 Frame = -2

Query: 1390 STFSTSAVELHLHLTITHSSDRKKKHIFFSSSVLRNPTKRHTFL-CNSSKSPPNLEEPQ- 1217
            +T  T+A+++  +     +SD KK  +F   S+ R    R   + C+S K P  LEE   
Sbjct: 2    ATVLTTAIDVCFN---PQNSDTKKHSLFLKPSLFRQSRSRKLNISCSSLKQPKTLEEEPI 58

Query: 1216 --SNQSLADQLKPLSLNLLSDHSPPQPNLLTKPKSTWANPSKPKPAVLSLQRHKRSPHSY 1043
                 SL++QLKPLS   L      Q  +L+KPKS W NP++PK +VLSLQR KRS +SY
Sbjct: 59   TTKTPSLSEQLKPLSATTLRQE---QTQILSKPKSVWVNPTRPKRSVLSLQRQKRSAYSY 115

Query: 1042 NPKLRDLKLFSKKLNDCDPTSEAEFLTTLEEIPHPPNRENALLILNSLKPWQKTHLFFNW 863
            NP+++DL+ F+ KLN    T ++EFL+ L+EIPHPPNR+NALL+LNSL+ WQKTH FFNW
Sbjct: 116  NPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFNW 175

Query: 862  IKTHNLFPLETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCN 683
            +K+ +LFP+ETIFYNVTMKSLRFGRQFQLIE++A EM+ +GVELDNITYSTIITCAKRCN
Sbjct: 176  VKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCN 235

Query: 682  LFDKAVDWFERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFS 503
            L++KA++WFERMY TGLMPDEVTYSAILDVY+K GKVEEVLSLYER  A+GWKPD IAFS
Sbjct: 236  LYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFS 295

Query: 502  VLGKMFGEAGDYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITS 323
            VLGKMFGEAGDYDGI YVLQEMKS+ V+PN+VVYNTLLEAMG+AGKPGLARSLF EM+ +
Sbjct: 296  VLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEA 355

Query: 322  GLTPNEKTLTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEA 143
            GLTPNEKTLTALVKIYGKARW RDAL+LWE M++  WPMDFILYNTLL+MCAD+GLEEEA
Sbjct: 356  GLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEA 415

Query: 142  ERLFEDMKRSERCKPDSWSYTAMLNIYGSGGNVEKAMSMFEDMSNLG 2
            ERLF DMK S +C+PD++SYTAMLNIYGSGG  EKAM +FE+M   G
Sbjct: 416  ERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAG 462



 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 1/244 (0%)
 Frame = -2

Query: 835  ETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWF 656
            + I ++V  K       +  I  +  EM    V+ + + Y+T++    R      A   F
Sbjct: 290  DAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLF 349

Query: 655  ERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEA 476
              M   GL P+E T +A++ +Y K     + L L+E  +A  W  D I ++ L  M  + 
Sbjct: 350  NEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADI 409

Query: 475  GDYDGIMYVLQEMK-SIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
            G  +    +  +MK S+   P+   Y  +L   G  GK   A  LFEEM+ +G+  N   
Sbjct: 410  GLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMG 469

Query: 298  LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMK 119
             T LV+  GKA+   D + +++     G   D  L   LLS+ A     E+AE++   ++
Sbjct: 470  CTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLE 529

Query: 118  RSER 107
            R+ +
Sbjct: 530  RANK 533


>ref|XP_003524052.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
            chloroplastic-like [Glycine max]
          Length = 712

 Score =  643 bits (1658), Expect = 0.0
 Identities = 319/450 (70%), Positives = 369/450 (82%), Gaps = 10/450 (2%)
 Frame = -2

Query: 1321 KKHIFFSSSVLRNPTKRHTFL-CNSSKSPP---------NLEEPQSNQSLADQLKPLSLN 1172
            K+  F  ++  R  T R  F+ C +S S P         N    + N SL+DQL PL+  
Sbjct: 17   KRTRFSITTPCRQKTNRKFFIHCATSNSTPEAPPTPTSDNNNNNKKNTSLSDQLAPLANK 76

Query: 1171 LLSDHSPPQPNLLTKPKSTWANPSKPKPAVLSLQRHKRSPHSYNPKLRDLKLFSKKLNDC 992
             LS  +  Q   L+KPKSTW NP+K K +VLS +R KR+ +SY+P+LRDLK F++KLN+ 
Sbjct: 77   TLSSATRDQSYALSKPKSTWVNPTKAKRSVLSSERQKRATYSYSPQLRDLKRFAQKLNES 136

Query: 991  DPTSEAEFLTTLEEIPHPPNRENALLILNSLKPWQKTHLFFNWIKTHNLFPLETIFYNVT 812
              +SE EFL  LEEIP P +RENALLILN+LKPWQKT+LF NWI+T NL P+ETIFYNVT
Sbjct: 137  G-SSEDEFLACLEEIPRPISRENALLILNTLKPWQKTNLFLNWIRTQNLLPMETIFYNVT 195

Query: 811  MKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWFERMYTTGL 632
            MKSLRFG+QF LIEDLAH+MIDNGV LDNITYSTII+CAK+CNL+DKAV WFERMY TGL
Sbjct: 196  MKSLRFGKQFGLIEDLAHQMIDNGVPLDNITYSTIISCAKKCNLYDKAVHWFERMYKTGL 255

Query: 631  MPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEAGDYDGIMY 452
            MPDEVTYSAILDVYA+LGKVEEV+SLYERGRA+GWKPDPI FSVLGKMFGEAGDYDGI Y
Sbjct: 256  MPDEVTYSAILDVYARLGKVEEVISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRY 315

Query: 451  VLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKTLTALVKIYG 272
            V QEM+S+GV+PNLVVYNTLLEAMGKAGKPG AR LFEEMI SG+ PNEKTLTA++KIYG
Sbjct: 316  VFQEMESVGVQPNLVVYNTLLEAMGKAGKPGFARGLFEEMIESGIVPNEKTLTAVIKIYG 375

Query: 271  KARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMKRSERCKPDS 92
            KARW RDALELW+RM+ NGWPMDFILYNTLL+MCAD+GL EEAE LF DMK+S  CKPDS
Sbjct: 376  KARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSVHCKPDS 435

Query: 91   WSYTAMLNIYGSGGNVEKAMSMFEDMSNLG 2
            WSYTAMLNIYGS G+V+KAM +F++M  LG
Sbjct: 436  WSYTAMLNIYGSQGDVDKAMKLFDEMCKLG 465



 Score = 80.5 bits (197), Expect = 2e-12
 Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
 Frame = -2

Query: 835 ETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWF 656
           + I ++V  K       +  I  +  EM   GV+ + + Y+T++    +      A   F
Sbjct: 293 DPITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLEAMGKAGKPGFARGLF 352

Query: 655 ERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEA 476
           E M  +G++P+E T +A++ +Y K     + L L++R + +GW  D I ++ L  M  + 
Sbjct: 353 EEMIESGIVPNEKTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADV 412

Query: 475 GDYDGIMYVLQEMK-SIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
           G  +    + ++MK S+  +P+   Y  +L   G  G    A  LF+EM   G+  N   
Sbjct: 413 GLVEEAETLFRDMKQSVHCKPDSWSYTAMLNIYGSQGDVDKAMKLFDEMCKLGVELNVMG 472

Query: 298 LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSM 173
            T L++  G+A    D + +++     G   D  L   LLS+
Sbjct: 473 FTCLIQCLGRAMEFDDLVRVFDISVERGIKPDDRLCGCLLSV 514



 Score = 75.1 bits (183), Expect = 7e-11
 Identities = 45/194 (23%), Positives = 98/194 (50%), Gaps = 1/194 (0%)
 Frame = -2

Query: 829 IFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWFER 650
           + YN  ++++    +      L  EMI++G+  +  T + +I    +      A++ ++R
Sbjct: 330 VVYNTLLEAMGKAGKPGFARGLFEEMIESGIVPNEKTLTAVIKIYGKARWSRDALELWQR 389

Query: 649 MYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRAS-GWKPDPIAFSVLGKMFGEAG 473
           M   G   D + Y+ +L++ A +G VEE  +L+   + S   KPD  +++ +  ++G  G
Sbjct: 390 MKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSVHCKPDSWSYTAMLNIYGSQG 449

Query: 472 DYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKTLT 293
           D D  M +  EM  +GVE N++ +  L++ +G+A +      +F+  +  G+ P+++   
Sbjct: 450 DVDKAMKLFDEMCKLGVELNVMGFTCLIQCLGRAMEFDDLVRVFDISVERGIKPDDRLCG 509

Query: 292 ALVKIYGKARWGRD 251
            L+ +   ++   D
Sbjct: 510 CLLSVVSLSQGSND 523


>ref|XP_006281680.1| hypothetical protein CARUB_v10027819mg [Capsella rubella]
            gi|482550384|gb|EOA14578.1| hypothetical protein
            CARUB_v10027819mg [Capsella rubella]
          Length = 715

 Score =  640 bits (1651), Expect = 0.0
 Identities = 310/452 (68%), Positives = 375/452 (82%), Gaps = 7/452 (1%)
 Frame = -2

Query: 1336 SSDRKKKHIFFSSSVLRNP-TKRHTFLCNSSKSPPNLEEPQ------SNQSLADQLKPLS 1178
            +SD KK  +F   S+LR   T++    C+S K P  LEE         + SL++QLKPLS
Sbjct: 19   NSDTKKHSLFLKPSLLRQSRTRKLNISCSSLKQPKTLEEEPITTTTTKSSSLSEQLKPLS 78

Query: 1177 LNLLSDHSPPQPNLLTKPKSTWANPSKPKPAVLSLQRHKRSPHSYNPKLRDLKLFSKKLN 998
               L +    Q ++L+KPKS W NP++PK +VLSLQR KRS +SYNP+++DL+ F+ KLN
Sbjct: 79   ATTLREE---QTHILSKPKSVWVNPTRPKRSVLSLQRQKRSAYSYNPQIKDLRAFALKLN 135

Query: 997  DCDPTSEAEFLTTLEEIPHPPNRENALLILNSLKPWQKTHLFFNWIKTHNLFPLETIFYN 818
              D T +++FL+ L+EIPHPP+R+NALL+LNSL+ WQKTH+FFNW+K+ +LFP+ETIFYN
Sbjct: 136  SSDFTEKSQFLSLLDEIPHPPDRDNALLVLNSLREWQKTHVFFNWVKSKDLFPMETIFYN 195

Query: 817  VTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWFERMYTT 638
            VTMKSLRFGRQF LIE++A EM+ +GVELDNITYSTIITCAKRCNL++KA++WFERMY T
Sbjct: 196  VTMKSLRFGRQFHLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKT 255

Query: 637  GLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEAGDYDGI 458
            GLMPDEVTYSA+LDVY+KLGKVEEVLSLYER  A+GWKPD +AFSVLGKMFGEAGDYDGI
Sbjct: 256  GLMPDEVTYSAVLDVYSKLGKVEEVLSLYERAVATGWKPDAVAFSVLGKMFGEAGDYDGI 315

Query: 457  MYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKTLTALVKI 278
             YVLQEMKS+ V+PN+VVYNTLLEAMG+A +PGLARSLF EM+ +GLTPNEKTLTALVKI
Sbjct: 316  RYVLQEMKSMDVKPNVVVYNTLLEAMGRARRPGLARSLFNEMLEAGLTPNEKTLTALVKI 375

Query: 277  YGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMKRSERCKP 98
            YGKARW +DAL+LWE M+   WPMDFILYNTLL+MCAD+GLEEEAERLF DMK S + KP
Sbjct: 376  YGKARWAKDALQLWEEMKEKNWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESAQSKP 435

Query: 97   DSWSYTAMLNIYGSGGNVEKAMSMFEDMSNLG 2
            D++SYTAMLNIYGSGG  EKAM +FE+M   G
Sbjct: 436  DNFSYTAMLNIYGSGGKAEKAMQLFEEMLEAG 467



 Score = 86.3 bits (212), Expect = 3e-14
 Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 1/244 (0%)
 Frame = -2

Query: 835  ETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWF 656
            + + ++V  K       +  I  +  EM    V+ + + Y+T++    R      A   F
Sbjct: 295  DAVAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRARRPGLARSLF 354

Query: 655  ERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEA 476
              M   GL P+E T +A++ +Y K    ++ L L+E  +   W  D I ++ L  M  + 
Sbjct: 355  NEMLEAGLTPNEKTLTALVKIYGKARWAKDALQLWEEMKEKNWPMDFILYNTLLNMCADI 414

Query: 475  GDYDGIMYVLQEMK-SIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
            G  +    +  +MK S   +P+   Y  +L   G  GK   A  LFEEM+ +G+  N   
Sbjct: 415  GLEEEAERLFNDMKESAQSKPDNFSYTAMLNIYGSGGKAEKAMQLFEEMLEAGVPVNVMG 474

Query: 298  LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMK 119
             T LV+  GKA+   D + +++     G   D  L   LLS+ A     E+AE++   ++
Sbjct: 475  CTCLVQCLGKAKRIDDLVYVFDLSIQRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLE 534

Query: 118  RSER 107
            ++ +
Sbjct: 535  KANQ 538


>ref|XP_002519842.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540888|gb|EEF42446.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 677

 Score =  632 bits (1629), Expect = e-178
 Identities = 317/428 (74%), Positives = 361/428 (84%), Gaps = 11/428 (2%)
 Frame = -2

Query: 1354 HLTITHSSDRKKKHIFFSSSVL-----RNPTKRH-TFLCNSSKSPPNLEEPQS--NQSLA 1199
            HLTITH SD+KK  +F SSS +      NP +R  T  CNS K+  +L E  +  N SL+
Sbjct: 13   HLTITHHSDKKKPILFTSSSPITITHNNNPYRRRLTISCNSRKTSKHLSESPNPKNPSLS 72

Query: 1198 DQLKPLSLNLLSDHSPP---QPNLLTKPKSTWANPSKPKPAVLSLQRHKRSPHSYNPKLR 1028
            DQLKPLS   LS  +     + +LL+KP STW NP+KPK +VLSLQR KRSP+S NPK++
Sbjct: 73   DQLKPLSSTTLSTTTTTTTTKHSLLSKPNSTWVNPTKPKRSVLSLQRQKRSPYSLNPKVK 132

Query: 1027 DLKLFSKKLNDCDPTSEAEFLTTLEEIPHPPNRENALLILNSLKPWQKTHLFFNWIKTHN 848
            +L+LF++KLNDCD T E+ FL+ LE+IP+P  RENALLILNSL+PWQK HLFFNWIKT N
Sbjct: 133  ELRLFAQKLNDCDST-ESSFLSLLEQIPYPLTRENALLILNSLRPWQKAHLFFNWIKTQN 191

Query: 847  LFPLETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKA 668
             FP+ETIFYNVTMKSLRFGRQF+LI+ LA+EM+ N +ELDNITYSTIITCAKRCN FD A
Sbjct: 192  SFPVETIFYNVTMKSLRFGRQFELIDKLANEMVSNEIELDNITYSTIITCAKRCNRFDMA 251

Query: 667  VDWFERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKM 488
            ++WFERMY TGLMPDEVTYSAILDVYAKLG+VEEVLSLYERG ASGWKPDPI FSVL KM
Sbjct: 252  LEWFERMYKTGLMPDEVTYSAILDVYAKLGRVEEVLSLYERGVASGWKPDPITFSVLAKM 311

Query: 487  FGEAGDYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPN 308
            FGEAGDYDGI YVLQEMKS+ V+PN+VVYNTLLEAMGKAGKPGLARSLF+EM+ SGLTPN
Sbjct: 312  FGEAGDYDGIRYVLQEMKSLAVQPNVVVYNTLLEAMGKAGKPGLARSLFDEMVESGLTPN 371

Query: 307  EKTLTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFE 128
            EKTLTAL KIYGKARW +DA+ELWERMRSN WPMDFILYNTLLSMCADLG+E+EAE LFE
Sbjct: 372  EKTLTALAKIYGKARWAKDAMELWERMRSNDWPMDFILYNTLLSMCADLGMEKEAETLFE 431

Query: 127  DMKRSERC 104
            DMKRSE C
Sbjct: 432  DMKRSEHC 439


>ref|XP_003549976.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 714

 Score =  630 bits (1625), Expect = e-178
 Identities = 312/453 (68%), Positives = 364/453 (80%), Gaps = 9/453 (1%)
 Frame = -2

Query: 1333 SDRKKKHIFFSSSVLRNPTKRHTFL-CNSSKSPPNL--------EEPQSNQSLADQLKPL 1181
            +D K+     +++  R  T R  F+ C +S S P             + N SL+DQL PL
Sbjct: 14   TDTKRTRFSITTTPCRQKTNRKFFIHCATSNSTPEAPPTPTSDNNNKKKNTSLSDQLAPL 73

Query: 1180 SLNLLSDHSPPQPNLLTKPKSTWANPSKPKPAVLSLQRHKRSPHSYNPKLRDLKLFSKKL 1001
            +   LS  +  Q   L+KPKSTW NP+K K +VLS +R KR+ +SY+P+LRDLK F++KL
Sbjct: 74   ANKTLSSATRDQSYALSKPKSTWVNPTKAKRSVLSSERQKRATYSYSPQLRDLKRFAQKL 133

Query: 1000 NDCDPTSEAEFLTTLEEIPHPPNRENALLILNSLKPWQKTHLFFNWIKTHNLFPLETIFY 821
            N+   +SE  FL  LEEIP P +RENALLILN+LKPWQKT+LF NWI+T NL P+ETIFY
Sbjct: 134  NESG-SSEDAFLACLEEIPRPISRENALLILNTLKPWQKTNLFLNWIRTQNLLPMETIFY 192

Query: 820  NVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWFERMYT 641
            NVTMKSLRFG+QF LIE+LAH+MIDNGV LDNITYSTII+CAK+CNL+DKAV WFERMY 
Sbjct: 193  NVTMKSLRFGKQFGLIEELAHQMIDNGVPLDNITYSTIISCAKKCNLYDKAVHWFERMYK 252

Query: 640  TGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEAGDYDG 461
            T LMPDEVTYSAILDVYA+LGKVEEV+SLYERGRA+GWKPDPI FSVLGKMFGEAGDYDG
Sbjct: 253  TSLMPDEVTYSAILDVYARLGKVEEVISLYERGRATGWKPDPITFSVLGKMFGEAGDYDG 312

Query: 460  IMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKTLTALVK 281
            I YV QEM+S+GV+PNLVVYNTLLEAMGKAGKP  AR LFEEMI  G+ PNEKTLTA++K
Sbjct: 313  IRYVFQEMESVGVQPNLVVYNTLLEAMGKAGKPVFARGLFEEMIELGIVPNEKTLTAVIK 372

Query: 280  IYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMKRSERCK 101
            IYGKARW RDALELW+RM+ NGWPMDFILYNTLL+MCAD+GL EEAE LF DMK+S  CK
Sbjct: 373  IYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSAHCK 432

Query: 100  PDSWSYTAMLNIYGSGGNVEKAMSMFEDMSNLG 2
            PDSWSYTAMLNIYGS G+V+KAM +F +M   G
Sbjct: 433  PDSWSYTAMLNIYGSQGDVDKAMKLFNEMCKSG 465



 Score = 78.2 bits (191), Expect = 8e-12
 Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 1/242 (0%)
 Frame = -2

Query: 835  ETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWF 656
            + I ++V  K       +  I  +  EM   GV+ + + Y+T++    +      A   F
Sbjct: 293  DPITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLEAMGKAGKPVFARGLF 352

Query: 655  ERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEA 476
            E M   G++P+E T +A++ +Y K     + L L++R + +GW  D I ++ L  M  + 
Sbjct: 353  EEMIELGIVPNEKTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFILYNTLLNMCADV 412

Query: 475  GDYDGIMYVLQEMK-SIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
            G  +    + ++MK S   +P+   Y  +L   G  G    A  LF EM  SG+  N   
Sbjct: 413  GLVEEAETLFRDMKQSAHCKPDSWSYTAMLNIYGSQGDVDKAMKLFNEMCKSGVELNVMG 472

Query: 298  LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMK 119
             T L++  G+A    D + ++      G   D  L   LLS+ +      + E++   ++
Sbjct: 473  FTCLIQCLGRATEFDDLVRVFGISVERGIKPDDRLCGCLLSVVSLSQGSNDEEKVLACLQ 532

Query: 118  RS 113
            R+
Sbjct: 533  RA 534


>ref|XP_006436751.1| hypothetical protein CICLE_v10033739mg [Citrus clementina]
            gi|557538947|gb|ESR49991.1| hypothetical protein
            CICLE_v10033739mg [Citrus clementina]
          Length = 692

 Score =  624 bits (1609), Expect = e-176
 Identities = 322/459 (70%), Positives = 366/459 (79%), Gaps = 5/459 (1%)
 Frame = -2

Query: 1363 LHLHLTITHSSDRKKKHIFFSSSVLRNPTKRHTFLCNSSKSPPNLEEPQSNQ-----SLA 1199
            L +HL+I  S    K+ IF +    R+   +    CNS KS  N+     N      SL+
Sbjct: 9    LDVHLSIPKSDT--KRPIFLTKPTQRSHPIKINISCNS-KSSENVAAESPNPETKTLSLS 65

Query: 1198 DQLKPLSLNLLSDHSPPQPNLLTKPKSTWANPSKPKPAVLSLQRHKRSPHSYNPKLRDLK 1019
            +QLKPLS   LS     +  LL+KPKSTW NP+KP+ +VLSLQR KRS +SYNP++RDLK
Sbjct: 66   EQLKPLSSTTLSPTKNDRTPLLSKPKSTWVNPTKPRRSVLSLQRQKRSTYSYNPRVRDLK 125

Query: 1018 LFSKKLNDCDPTSEAEFLTTLEEIPHPPNRENALLILNSLKPWQKTHLFFNWIKTHNLFP 839
            LF++KLNDCD T EA FL  + EIPH P RENALLILNSLK WQK++ FFNWIK+ NLFP
Sbjct: 126  LFARKLNDCDNTEEA-FLRAITEIPHQPTRENALLILNSLKFWQKSYFFFNWIKSQNLFP 184

Query: 838  LETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDW 659
            +ETIFYNVTMKSLRFGRQFQLIE LA+EM+ N +ELDNITYSTIITCAKRCNLFD+A++W
Sbjct: 185  METIFYNVTMKSLRFGRQFQLIEQLANEMVSNEIELDNITYSTIITCAKRCNLFDEAIEW 244

Query: 658  FERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGE 479
            FERMY TGLMPDEVTYSAILDVYAK GKVEEVLSLYERG ASGWKPDPIAFSVLGKMFGE
Sbjct: 245  FERMYKTGLMPDEVTYSAILDVYAKSGKVEEVLSLYERGVASGWKPDPIAFSVLGKMFGE 304

Query: 478  AGDYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLARSLFEEMITSGLTPNEKT 299
            +GDYDGI YVLQEMKS+GV+PNLVVYNTLLEAMGKAGKPGLARSLF+EM+ SGLTP+EKT
Sbjct: 305  SGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGLARSLFDEMVESGLTPDEKT 364

Query: 298  LTALVKIYGKARWGRDALELWERMRSNGWPMDFILYNTLLSMCADLGLEEEAERLFEDMK 119
            LTAL+KIYGKARW +DALELWERMR N WPMDFILYNTLL+MCAD+GL EEAERLFEDMK
Sbjct: 365  LTALIKIYGKARWAKDALELWERMRENKWPMDFILYNTLLNMCADIGLVEEAERLFEDMK 424

Query: 118  RSERCKPDSWSYTAMLNIYGSGGNVEKAMSMFEDMSNLG 2
             SE      W             NV+KA+ +FE+MS LG
Sbjct: 425  LSE-----YW-------------NVDKAIELFEEMSKLG 445



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 18/204 (8%)
 Frame = -2

Query: 835 ETIFYNVTMKSLRFGRQFQLIEDLAHEMIDNGVELDNITYSTIITCAKRCNLFDKAVDWF 656
           + I ++V  K       +  I  +  EM   GV+ + + Y+T++    +      A   F
Sbjct: 291 DPIAFSVLGKMFGESGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGLARSLF 350

Query: 655 ERMYTTGLMPDEVTYSAILDVYAKLGKVEEVLSLYERGRASGWKPDPIAFSVLGKMFGEA 476
           + M  +GL PDE T +A++ +Y K    ++ L L+ER R + W  D I ++ L  M  + 
Sbjct: 351 DEMVESGLTPDEKTLTALIKIYGKARWAKDALELWERMRENKWPMDFILYNTLLNMCADI 410

Query: 475 G------------------DYDGIMYVLQEMKSIGVEPNLVVYNTLLEAMGKAGKPGLAR 350
           G                  + D  + + +EM  +G   N++    L++ MGKA +     
Sbjct: 411 GLVEEAERLFEDMKLSEYWNVDKAIELFEEMSKLGDAVNVMGSTCLIQCMGKARRIDDLV 470

Query: 349 SLFEEMITSGLTPNEKTLTALVKI 278
            +F   I  G+ P+++    L+ +
Sbjct: 471 RVFGVSIDRGVKPDDRLCGCLLSV 494