BLASTX nr result
ID: Akebia25_contig00016903
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00016903
(353 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEK71820.1| hypothetical chloroplast RF2 [Hedyosmum mexicanum] 62 6e-08
ref|YP_004123459.1| Ycf2 [Rhizanthella gardneri] gi|317134131|re... 62 8e-08
gb|AEZ48732.1| hypothetical chloroplast RF2, partial [Apostasia ... 61 2e-07
ref|YP_004940621.1| ycf2 gene product [Neottia nidus-avis] gi|36... 60 2e-07
gb|ABQ14849.1| Ycf2 [Itea virginica] 60 2e-07
gb|ABQ14831.1| Ycf2 [Hamamelis japonica] 60 3e-07
ref|YP_008081501.1| Ycf2 (chloroplast) [Trochodendron aralioides... 60 4e-07
gb|AEK71806.1| hypothetical chloroplast RF2 [Caryocar glabrum] 60 4e-07
gb|AEK71683.1| hypothetical chloroplast RF2 [Trochodendron arali... 60 4e-07
gb|ADO27650.1| ycf2 [Rhizanthella gardneri] 60 4e-07
gb|ADD30901.1| putative RF2 protein [Trochodendron aralioides] 60 4e-07
gb|ADD30892.1| putative RF2 protein [Euonymus americanus] gi|340... 60 4e-07
ref|YP_003434019.1| hypothetical chloroplast RF21 [Typha latifol... 60 4e-07
ref|YP_008963735.1| hypothetical chloroplast RF21 (chloroplast) ... 59 5e-07
gb|AFH01584.1| hypothetical chloroplast RF21 (chloroplast) [Nelu... 59 5e-07
gb|AEZ48749.1| hypothetical chloroplast RF2, partial [Pitcairnia... 59 5e-07
gb|AEZ48745.1| hypothetical chloroplast RF2, partial [Navia saxi... 59 5e-07
gb|AEZ48739.1| hypothetical chloroplast RF2, partial [Fosterella... 59 5e-07
ref|YP_005090221.1| ycf2 gene product (chloroplast) [Ricinus com... 59 5e-07
ref|YP_004564147.1| hypothetical chloroplast RF2 [Nelumbo nucife... 59 5e-07
>gb|AEK71820.1| hypothetical chloroplast RF2 [Hedyosmum mexicanum]
Length = 2317
Score = 62.4 bits (150), Expect = 6e-08
Identities = 34/50 (68%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Frame = -2
Query: 352 PIKSQVSNIFIPNNNFHKV--TSYKL*KSFHFTI*SDPFVCRAIYSIADI 209
PI+SQVS+IFIPN++F + +Y L KSFHF I SDPFV RAIYSIADI
Sbjct: 1093 PIESQVSDIFIPNDSFPQSGDETYNLYKSFHFPIRSDPFVRRAIYSIADI 1142
>ref|YP_004123459.1| Ycf2 [Rhizanthella gardneri] gi|317134131|ref|YP_004123462.1| Ycf2
[Rhizanthella gardneri] gi|300521458|gb|ADK25941.1| Ycf2
[Rhizanthella gardneri] gi|300521459|gb|ADK25942.1| Yfc2
[Rhizanthella gardneri]
Length = 2010
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = -2
Query: 352 PIKSQVSNIFIPNNNFHKVTSYKL*KSFHFTI*SDPFVCRAIYSIADICT 203
PI+SQVS+IFIP + FH T Y L KSFHF I SDPFV RAIYSIADI T
Sbjct: 898 PIESQVSDIFIPKD-FHDET-YNLYKSFHFPIRSDPFVRRAIYSIADIST 945
>gb|AEZ48732.1| hypothetical chloroplast RF2, partial [Apostasia wallichii]
Length = 2288
Score = 60.8 bits (146), Expect = 2e-07
Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 5/69 (7%)
Frame = -2
Query: 352 PIKSQVSNIFIPNNNFHK----VTSYKL*KSFHFTI*SDPFVCRAIYSIADI-CTALSQA 188
PI+SQVS+IFIPN++ YKL KSFHF I SDPFV RAIYSIADI T L++
Sbjct: 1080 PIESQVSDIFIPNDSPQSGDETYNLYKLYKSFHFPIRSDPFVRRAIYSIADISATPLTE- 1138
Query: 187 WMDEVVRLE 161
+++V LE
Sbjct: 1139 --EQLVNLE 1145
>ref|YP_004940621.1| ycf2 gene product [Neottia nidus-avis]
gi|364532656|ref|YP_004940627.1| ycf2 gene product
[Neottia nidus-avis] gi|339717094|gb|AEJ88721.1|
hypothetical protein RF2 [Neottia nidus-avis]
gi|339717100|gb|AEJ88727.1| hypothetical protein RF2
[Neottia nidus-avis]
Length = 2227
Score = 60.5 bits (145), Expect = 2e-07
Identities = 39/69 (56%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Frame = -2
Query: 352 PIKSQVSNIFIPNN----NFHKVTSYKL*KSFHFTI*SDPFVCRAIYSIADI-CTALSQA 188
PI+SQVS+IFIPN+ YKL KSFHFTI SDPFV AIYSIADI T L +
Sbjct: 1034 PIESQVSDIFIPNDFPQSGDETYNLYKLYKSFHFTIRSDPFVRGAIYSIADISATPLKE- 1092
Query: 187 WMDEVVRLE 161
+++V LE
Sbjct: 1093 --EQIVNLE 1099
>gb|ABQ14849.1| Ycf2 [Itea virginica]
Length = 2306
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/49 (69%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = -2
Query: 352 PIKSQVSNIFIPNNNFHKVT-SYKL*KSFHFTI*SDPFVCRAIYSIADI 209
PI+SQVSNIFIPN+ +Y L KSFHF I SDPFV RAIYSIADI
Sbjct: 1090 PIESQVSNIFIPNDFLQTGDKTYNLYKSFHFPIRSDPFVRRAIYSIADI 1138
>gb|ABQ14831.1| Ycf2 [Hamamelis japonica]
Length = 2292
Score = 60.1 bits (144), Expect = 3e-07
Identities = 35/50 (70%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Frame = -2
Query: 352 PIKSQVSNIFIPNNNFHKVT--SYKL*KSFHFTI*SDPFVCRAIYSIADI 209
PI+SQVSNIFIPN+ F + + +Y L KSFHF I SDPFV RAIYSIADI
Sbjct: 1090 PIESQVSNIFIPND-FPQSSDETYNLYKSFHFPIRSDPFVRRAIYSIADI 1138
>ref|YP_008081501.1| Ycf2 (chloroplast) [Trochodendron aralioides]
gi|511348592|ref|YP_008081518.1| Ycf2 (chloroplast)
[Trochodendron aralioides] gi|479279340|gb|AGJ72193.1|
Ycf2 (chloroplast) [Trochodendron aralioides]
gi|479279357|gb|AGJ72210.1| Ycf2 (chloroplast)
[Trochodendron aralioides]
Length = 2298
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/49 (69%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Frame = -2
Query: 352 PIKSQVSNIFIPNN-NFHKVTSYKL*KSFHFTI*SDPFVCRAIYSIADI 209
PI+SQVSNIFIPN+ + +Y L KSFHF I SDPFV RAIYSIADI
Sbjct: 1096 PIESQVSNIFIPNDFPQNGDETYNLYKSFHFPIRSDPFVRRAIYSIADI 1144
>gb|AEK71806.1| hypothetical chloroplast RF2 [Caryocar glabrum]
Length = 2303
Score = 59.7 bits (143), Expect = 4e-07
Identities = 39/66 (59%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Frame = -2
Query: 352 PIKSQVSNIFIPNNNFHKVTS-YKL*KSFHFTI*SDPFVCRAIYSIADIC-TALSQAWMD 179
PI+SQVSNIFIPN+ Y L KSFHF I SDPFV RAIYSIADI T L++
Sbjct: 1105 PIESQVSNIFIPNDFPQSGDERYNLYKSFHFPIRSDPFVRRAIYSIADISGTPLTEG--- 1161
Query: 178 EVVRLE 161
++V LE
Sbjct: 1162 QIVNLE 1167
>gb|AEK71683.1| hypothetical chloroplast RF2 [Trochodendron aralioides]
Length = 2293
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/49 (69%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Frame = -2
Query: 352 PIKSQVSNIFIPNN-NFHKVTSYKL*KSFHFTI*SDPFVCRAIYSIADI 209
PI+SQVSNIFIPN+ + +Y L KSFHF I SDPFV RAIYSIADI
Sbjct: 1091 PIESQVSNIFIPNDFPQNGDETYNLYKSFHFPIRSDPFVRRAIYSIADI 1139
>gb|ADO27650.1| ycf2 [Rhizanthella gardneri]
Length = 562
Score = 59.7 bits (143), Expect = 4e-07
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = -2
Query: 352 PIKSQVSNIFIPNNNFHKVTSYKL*KSFHFTI*SDPFVCRAIYSIADICT 203
PI+SQVS+IFIP + FH T Y L K FHF I SDPFV RAIYSIADI T
Sbjct: 72 PIESQVSDIFIPKD-FHDET-YNLYKLFHFPIRSDPFVRRAIYSIADIST 119
>gb|ADD30901.1| putative RF2 protein [Trochodendron aralioides]
Length = 2293
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/49 (69%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Frame = -2
Query: 352 PIKSQVSNIFIPNN-NFHKVTSYKL*KSFHFTI*SDPFVCRAIYSIADI 209
PI+SQVSNIFIPN+ + +Y L KSFHF I SDPFV RAIYSIADI
Sbjct: 1091 PIESQVSNIFIPNDFPQNGDETYNLYKSFHFPIRSDPFVRRAIYSIADI 1139
>gb|ADD30892.1| putative RF2 protein [Euonymus americanus]
gi|340807180|gb|AEK71772.1| hypothetical chloroplast RF2
[Euonymus americanus]
Length = 2276
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/49 (69%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = -2
Query: 352 PIKSQVSNIFIPNNNFHKVTS-YKL*KSFHFTI*SDPFVCRAIYSIADI 209
PI+SQVSNIFIPN+ Y L KSFHF I SDPFV RAIYSIADI
Sbjct: 1089 PIESQVSNIFIPNDFSESGDERYNLYKSFHFPIRSDPFVRRAIYSIADI 1137
>ref|YP_003434019.1| hypothetical chloroplast RF21 [Typha latifolia]
gi|289065151|ref|YP_003434036.1| hypothetical chloroplast
RF21 [Typha latifolia] gi|281371816|gb|ADA63743.1|
hypothetical chloroplast RF21 [Typha latifolia]
gi|281371834|gb|ADA63761.1| hypothetical chloroplast RF21
[Typha latifolia]
Length = 2293
Score = 59.7 bits (143), Expect = 4e-07
Identities = 38/66 (57%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Frame = -2
Query: 352 PIKSQVSNIFIPNNNFHKVT-SYKL*KSFHFTI*SDPFVCRAIYSIADI-CTALSQAWMD 179
PI+SQVSNIFIPN+ +Y L KSFHF I SDPFV RAIYSIADI T L++ +
Sbjct: 1085 PIESQVSNIFIPNDFPQSGDETYNLYKSFHFPIRSDPFVRRAIYSIADISATPLTE---E 1141
Query: 178 EVVRLE 161
++V E
Sbjct: 1142 QIVNFE 1147
>ref|YP_008963735.1| hypothetical chloroplast RF21 (chloroplast) [Liquidambar formosana]
gi|568244972|ref|YP_008963754.1| hypothetical chloroplast
RF21 (chloroplast) [Liquidambar formosana]
gi|491650414|gb|AGL13474.1| hypothetical chloroplast RF21
(chloroplast) [Liquidambar formosana]
gi|491650433|gb|AGL13493.1| hypothetical chloroplast RF21
(chloroplast) [Liquidambar formosana]
Length = 2297
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/49 (69%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = -2
Query: 352 PIKSQVSNIFIPNNNFHKVT-SYKL*KSFHFTI*SDPFVCRAIYSIADI 209
PI+SQVSNIFIPN+ +Y L KSFHF I SDPFV RAIYSIADI
Sbjct: 1090 PIESQVSNIFIPNDFPQSGDETYNLYKSFHFPIRSDPFVRRAIYSIADI 1138
>gb|AFH01584.1| hypothetical chloroplast RF21 (chloroplast) [Nelumbo lutea]
gi|383286951|gb|AFH01600.1| hypothetical chloroplast RF21
(chloroplast) [Nelumbo lutea]
Length = 2304
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/49 (69%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = -2
Query: 352 PIKSQVSNIFIPNNNFHKVT-SYKL*KSFHFTI*SDPFVCRAIYSIADI 209
PI+SQVSNIFIPN+ +Y L KSFHF I SDPFV RAIYSIADI
Sbjct: 1090 PIESQVSNIFIPNDFPQSGDETYNLYKSFHFPIRSDPFVRRAIYSIADI 1138
>gb|AEZ48749.1| hypothetical chloroplast RF2, partial [Pitcairnia feliciana]
Length = 2291
Score = 59.3 bits (142), Expect = 5e-07
Identities = 38/66 (57%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Frame = -2
Query: 352 PIKSQVSNIFIPNNNFHKVT-SYKL*KSFHFTI*SDPFVCRAIYSIADI-CTALSQAWMD 179
PI+SQVS+IFIPN+ +Y L KSFHF I SDPFV RAIYSIADI T L++ +
Sbjct: 1091 PIESQVSDIFIPNDFPQSGDETYNLYKSFHFPIRSDPFVRRAIYSIADISATPLTE---E 1147
Query: 178 EVVRLE 161
++V LE
Sbjct: 1148 QIVNLE 1153
>gb|AEZ48745.1| hypothetical chloroplast RF2, partial [Navia saxicola]
Length = 2291
Score = 59.3 bits (142), Expect = 5e-07
Identities = 38/66 (57%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Frame = -2
Query: 352 PIKSQVSNIFIPNNNFHKVT-SYKL*KSFHFTI*SDPFVCRAIYSIADI-CTALSQAWMD 179
PI+SQVS+IFIPN+ +Y L KSFHF I SDPFV RAIYSIADI T L++ +
Sbjct: 1091 PIESQVSDIFIPNDFPQSGDETYNLYKSFHFPIRSDPFVRRAIYSIADISATPLTE---E 1147
Query: 178 EVVRLE 161
++V LE
Sbjct: 1148 QIVNLE 1153
>gb|AEZ48739.1| hypothetical chloroplast RF2, partial [Fosterella caulescens]
Length = 2284
Score = 59.3 bits (142), Expect = 5e-07
Identities = 38/66 (57%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Frame = -2
Query: 352 PIKSQVSNIFIPNNNFHKVT-SYKL*KSFHFTI*SDPFVCRAIYSIADI-CTALSQAWMD 179
PI+SQVS+IFIPN+ +Y L KSFHF I SDPFV RAIYSIADI T L++ +
Sbjct: 1084 PIESQVSDIFIPNDFPQSGDETYNLYKSFHFPIRSDPFVRRAIYSIADISATPLTE---E 1140
Query: 178 EVVRLE 161
++V LE
Sbjct: 1141 QIVNLE 1146
>ref|YP_005090221.1| ycf2 gene product (chloroplast) [Ricinus communis]
gi|372450201|ref|YP_005090239.1| ycf2 gene product
(chloroplast) [Ricinus communis]
gi|339516209|gb|AEJ82599.1| Ycf2 [Ricinus communis]
gi|339516227|gb|AEJ82617.1| Ycf2 [Ricinus communis]
Length = 2286
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/49 (69%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = -2
Query: 352 PIKSQVSNIFIPNNNFHKVTS-YKL*KSFHFTI*SDPFVCRAIYSIADI 209
PI+SQVSNIFIPN+ Y L KSFHF I SDPFV RAIYSIADI
Sbjct: 1092 PIESQVSNIFIPNDFPQSGNERYNLYKSFHFPIRSDPFVHRAIYSIADI 1140
>ref|YP_004564147.1| hypothetical chloroplast RF2 [Nelumbo nucifera]
gi|334362111|ref|YP_004564164.1| hypothetical chloroplast
RF2 [Nelumbo nucifera] gi|224474267|gb|ACN49453.1|
hypothetical chloroplast RF2 [Nelumbo nucifera]
gi|224474284|gb|ACN49470.1| hypothetical chloroplast RF2
[Nelumbo nucifera] gi|340807030|gb|AEK71646.1|
hypothetical chloroplast RF2 [Nelumbo nucifera]
gi|383286841|gb|AFH01491.1| hypothetical chloroplast RF21
(chloroplast) [Nelumbo nucifera]
gi|383286862|gb|AFH01512.1| hypothetical chloroplast RF21
(chloroplast) [Nelumbo nucifera]
gi|519666955|gb|AGO98567.1| hypothetical chloroplast RF21
(chloroplast) [Nelumbo nucifera]
gi|519666972|gb|AGO98584.1| hypothetical chloroplast RF21
(chloroplast) [Nelumbo nucifera]
Length = 2310
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/49 (69%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = -2
Query: 352 PIKSQVSNIFIPNNNFHKVT-SYKL*KSFHFTI*SDPFVCRAIYSIADI 209
PI+SQVSNIFIPN+ +Y L KSFHF I SDPFV RAIYSIADI
Sbjct: 1090 PIESQVSNIFIPNDFPQSGDETYNLYKSFHFPIRSDPFVRRAIYSIADI 1138