BLASTX nr result

ID: Akebia25_contig00016060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00016060
         (499 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510746.1| Squamosa promoter-binding protein, putative ...    57   4e-06
ref|XP_002307005.2| hypothetical protein POPTR_0005s28010g [Popu...    56   5e-06

>ref|XP_002510746.1| Squamosa promoter-binding protein, putative [Ricinus communis]
           gi|223551447|gb|EEF52933.1| Squamosa promoter-binding
           protein, putative [Ricinus communis]
          Length = 1073

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 27/41 (65%), Positives = 31/41 (75%)
 Frame = -1

Query: 142 MEELGAQVAHPFFIHQAIPGGFREVASMAKKRDLPWQNPNF 20
           MEE+GAQVA P FIHQA+   F + ASMAKKRDL +Q  NF
Sbjct: 1   MEEVGAQVASPIFIHQALSSRFCDAASMAKKRDLSYQTSNF 41


>ref|XP_002307005.2| hypothetical protein POPTR_0005s28010g [Populus trichocarpa]
           gi|550339907|gb|EEE94001.2| hypothetical protein
           POPTR_0005s28010g [Populus trichocarpa]
          Length = 1039

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/41 (63%), Positives = 33/41 (80%)
 Frame = -1

Query: 142 MEELGAQVAHPFFIHQAIPGGFREVASMAKKRDLPWQNPNF 20
           ME++GAQVA P FIHQA+   + ++ASMAKKRDL +Q PNF
Sbjct: 1   MEKVGAQVAAPMFIHQALSSRYCDLASMAKKRDLSYQMPNF 41


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