BLASTX nr result

ID: Akebia25_contig00014752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00014752
         (359 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB83506.1| Putative E3 ubiquitin-protein ligase LIN-1 [Morus...    58   2e-06
ref|XP_006451205.1| hypothetical protein CICLE_v10007255mg [Citr...    53   2e-06

>gb|EXB83506.1| Putative E3 ubiquitin-protein ligase LIN-1 [Morus notabilis]
          Length = 1365

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/46 (58%), Positives = 36/46 (78%), Gaps = 2/46 (4%)
 Frame = -3

Query: 153 LLRCMKVDGKCRNIIAYMAELVPIL*CFMGANDGDMFKM--FVFSL 22
           L++CM+ DG CRNIIA  AEL P+L CFMGA+DG+ F++  F+F L
Sbjct: 740 LVKCMQEDGMCRNIIADTAELAPVLECFMGASDGEKFEIARFLFEL 785


>ref|XP_006451205.1| hypothetical protein CICLE_v10007255mg [Citrus clementina]
           gi|557554431|gb|ESR64445.1| hypothetical protein
           CICLE_v10007255mg [Citrus clementina]
          Length = 1380

 Score = 53.1 bits (126), Expect(2) = 2e-06
 Identities = 24/42 (57%), Positives = 31/42 (73%)
 Frame = -3

Query: 153 LLRCMKVDGKCRNIIAYMAELVPIL*CFMGANDGDMFKMFVF 28
           LLRCM+ DGKCRN IA  AEL P++  FM A+DG+ F++  F
Sbjct: 755 LLRCMQEDGKCRNSIADKAELAPVMESFMAASDGERFEIVCF 796



 Score = 23.9 bits (50), Expect(2) = 2e-06
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -2

Query: 37  VCFLSELDKLNK 2
           VCFLSEL KLN+
Sbjct: 794 VCFLSELVKLNR 805


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