BLASTX nr result
ID: Akebia25_contig00014248
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00014248
(466 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007202968.1| hypothetical protein PRUPE_ppa018352mg, part... 57 4e-12
gb|AAO13467.1| Putative retrovirus-related pol polyprotein [Oryz... 61 2e-10
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc... 61 2e-10
ref|XP_007210141.1| hypothetical protein PRUPE_ppb013738mg [Prun... 51 7e-10
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 57 3e-09
gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subc... 55 6e-09
gb|AAK29467.1| polyprotein-like [Solanum chilense] 57 9e-09
gb|EMS60458.1| Retrovirus-related Pol polyprotein from transposo... 47 3e-08
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc... 59 7e-07
ref|XP_006442418.1| hypothetical protein CICLE_v10023471mg, part... 49 2e-06
emb|CAD41329.2| OJ991113_30.13 [Oryza sativa Japonica Group] 57 3e-06
ref|XP_007209839.1| hypothetical protein PRUPE_ppa014574mg [Prun... 39 5e-06
>ref|XP_007202968.1| hypothetical protein PRUPE_ppa018352mg, partial [Prunus persica]
gi|462398499|gb|EMJ04167.1| hypothetical protein
PRUPE_ppa018352mg, partial [Prunus persica]
Length = 199
Score = 57.0 bits (136), Expect(2) = 4e-12
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +3
Query: 195 DEGQDIIEHLNMFNWRFSDXXXXXXXXXXXXXXXXX-TSFPNSFKHFRITLMFYNETLKF 371
+EG ++EH++ FN +D TS P S+KHFR+TLMF TLK+
Sbjct: 60 EEGASVMEHMSAFNRCIADLQRLDEIYKLEDNVVMLLTSMPPSYKHFRMTLMFDKGTLKY 119
Query: 372 EELVRDLIFHVTMNKSSGNEAQGK*LI 452
EE+++D++ H M + G+ ++G+ L+
Sbjct: 120 EEVMKDILTHHRMVQRFGDSSRGEGLM 146
Score = 39.7 bits (91), Expect(2) = 4e-12
Identities = 25/66 (37%), Positives = 41/66 (62%)
Frame = +1
Query: 16 ETWEELDATSFNELHVSD*VMYSIMKEKTTEETRDMLEKFYMRKTLFNKLFLKDQLYGLR 195
E +EL S ++ H+ D V+ M E ++T D LEK + K+L NKLFLK++L+ L+
Sbjct: 1 EDLDELARGSIDQ-HLIDEVLCKAM-EYIPKQTWDELEKMFALKSLSNKLFLKEELHSLK 58
Query: 196 MKDRIS 213
+++ S
Sbjct: 59 IEEGAS 64
>gb|AAO13467.1| Putative retrovirus-related pol polyprotein [Oryza sativa Japonica
Group] gi|108706491|gb|ABF94286.1| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 556
Score = 61.2 bits (147), Expect(2) = 2e-10
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +1
Query: 1 ESMSNETWEEL--DATSFNELHVSD*VMYSIMKEKTTEETRDMLEKFYMRKTLFNKLFLK 174
E M W E+ AT+ L +SD VMY +M EKT +E D L YM K+L +KL+LK
Sbjct: 177 EKMDVGKWVEMKAQATAIIRLSLSDFVMYQVMDEKTPKEIWDKLASLYMSKSLTSKLYLK 236
Query: 175 DQLYGLRMKD 204
QLYGL+M++
Sbjct: 237 QQLYGLQMQE 246
Score = 29.6 bits (65), Expect(2) = 2e-10
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +3
Query: 198 EGQDIIEHLNMFNWRFSDXXXXXXXXXXXXXXXXXT-SFPNSFKHFRITLMFYNETLKFE 374
E D+ +H+++FN D S P SF+H TL +T+K E
Sbjct: 246 EESDLRKHVDVFNQLVVDLSKLDVKLDDEDKAIILLCSLPPSFEHVVTTLTHGKDTVKTE 305
Query: 375 ELVRDLIFHVTMNKSSGNEA 434
E++ L+ + +S NEA
Sbjct: 306 EIISSLLAR-DLRRSKKNEA 324
>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 425
Score = 61.2 bits (147), Expect(2) = 2e-10
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +1
Query: 1 ESMSNETWEEL--DATSFNELHVSD*VMYSIMKEKTTEETRDMLEKFYMRKTLFNKLFLK 174
E M WEE+ A + L +SD VMY +M EKT +E D L YM K+L +KL+LK
Sbjct: 46 EKMDAGKWEEMKAQAAATIRLSLSDSVMYPVMDEKTPKEIWDKLASLYMSKSLTSKLYLK 105
Query: 175 DQLYGLRMKD 204
QLYGL+M++
Sbjct: 106 QQLYGLQMQE 115
Score = 29.6 bits (65), Expect(2) = 2e-10
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 198 EGQDIIEHLNMFNWRFSDXXXXXXXXXXXXXXXXXT-SFPNSFKHFRITLMFYNETLKFE 374
E D+ +H+++FN D S P S++H TLM +T+K E
Sbjct: 115 EESDLRKHVDVFNQLVVDLSKLDVKLDDEDMAIILLCSLPPSYEHVVTTLMHGKDTVKTE 174
Query: 375 ELVRDLIFHVTMNKSSGNEA 434
E + L+ + +S+ NEA
Sbjct: 175 EKISSLLAR-DLRRSNKNEA 193
>ref|XP_007210141.1| hypothetical protein PRUPE_ppb013738mg [Prunus persica]
gi|462405876|gb|EMJ11340.1| hypothetical protein
PRUPE_ppb013738mg [Prunus persica]
Length = 366
Score = 51.2 bits (121), Expect(2) = 7e-10
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +3
Query: 180 TLWPKDEGQDIIEHLNMFNWRFSDXXXXXXXXXXXXXXXXX-TSFPNSFKHFRITLMFYN 356
TL KD+ +++++HL+ FN ++ TS P+S+KHFR+TL+F
Sbjct: 80 TLRVKDD-RNMMKHLSTFNMCIANFQWIYEVYKLEDKVVLLLTSLPSSYKHFRMTLIFGQ 138
Query: 357 ETLKFEELVRDLIFHVTMNKSSG 425
TLKFEE+V+DL +H + S G
Sbjct: 139 GTLKFEEVVQDLKYHRMVQCSKG 161
Score = 37.7 bits (86), Expect(2) = 7e-10
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +1
Query: 73 VMYSIMKEKTTEETRDMLEKFYMRKTLFNKLFLKDQLYGLRMKD 204
V+ ++ E+ T++T + L + + K+L NK FLKD++ LR+KD
Sbjct: 42 VLSVVLAEEITKQTWEKLREMFTSKSLSNKHFLKDEVLTLRVKD 85
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 56.6 bits (135), Expect(2) = 3e-09
Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +1
Query: 1 ESMSNETWEELD--ATSFNELHVSD*VMYSIMKEKTTEETRDMLEKFYMRKTLFNKLFLK 174
++M E W +LD A S LH+SD V+ +I+ E T LE YM KTL NKL+LK
Sbjct: 45 DTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLK 104
Query: 175 DQLYGLRMKD 204
QLY L M +
Sbjct: 105 KQLYALHMSE 114
Score = 30.0 bits (66), Expect(2) = 3e-09
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +3
Query: 198 EGQDIIEHLNMFNWRFSD-XXXXXXXXXXXXXXXXXTSFPNSFKHFRITLMFYNETLKFE 374
EG + + HLN+FN + S P+S+ + T++ T++ +
Sbjct: 114 EGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELK 173
Query: 375 ELVRDLIFHVTMNKSSGNEAQ 437
++ L+ + M K N+ Q
Sbjct: 174 DVTSALLLNEKMRKKPENQGQ 194
>gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 415
Score = 54.7 bits (130), Expect(2) = 6e-09
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +1
Query: 1 ESMSNETWEEL--DATSFNELHVSD*VMYSIMKEKTTEETRDMLEKFYMRKTLFNKLFLK 174
E + + W E+ A + L +SD VMY +M EK+ +E D L +M K+L +KL+LK
Sbjct: 46 EKIDADKWNEMKAQAAATIRLSLSDSVMYQVMDEKSPKEIWDKLASLHMSKSLTSKLYLK 105
Query: 175 DQLYGLRMKD 204
QLYGL++++
Sbjct: 106 QQLYGLQVQE 115
Score = 31.2 bits (69), Expect(2) = 6e-09
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Frame = +3
Query: 198 EGQDIIEHLNMFNWRFSDXXXXXXXXXXXXXXXXXT-SFPNSFKHFRITLMFYNETLKFE 374
E D+ +H+++FN D S P S++H TL +T+K E
Sbjct: 115 EESDLRKHVDVFNQLVVDLSKLDVKLDDEDKAIILLCSLPLSYEHVVTTLTHGKDTVKTE 174
Query: 375 ELVRDLIFHVTMNKSSGNEA----QGK*LIAK 458
E++ L+ + +S NEA QGK L+ K
Sbjct: 175 EIISSLLAR-DLRRSKKNEATKASQGKSLLVK 205
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 57.4 bits (137), Expect(2) = 9e-09
Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +1
Query: 1 ESMSNETWEELD--ATSFNELHVSD*VMYSIMKEKTTEETRDMLEKFYMRKTLFNKLFLK 174
ESM E WEELD A S LH++D V+ +I+ E++ LE YM KTL NKL+LK
Sbjct: 46 ESMKLEDWEELDEKAASAIRLHLTDDVVNNIVDEESACGIWTKLENLYMSKTLTNKLYLK 105
Query: 175 DQLYGLRMKD 204
QLY L M +
Sbjct: 106 KQLYTLHMDE 115
Score = 27.7 bits (60), Expect(2) = 9e-09
Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +3
Query: 195 DEGQDIIEHLNMFNWRFSD-XXXXXXXXXXXXXXXXXTSFPNSFKHFRITLMFYNETLKF 371
DEG + + HLN+ N + S P+S+ T++ ++++
Sbjct: 114 DEGTNFLSHLNVLNGLITQLANLGVKIEEEDKRIVLLNSLPSSYDTLSTTILHGKDSIQL 173
Query: 372 EELVRDLIFHVTMNKSSGNEAQ 437
+++ L+ + M K N Q
Sbjct: 174 KDVTSALLLNEKMRKKPENHGQ 195
>gb|EMS60458.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Triticum urartu]
Length = 528
Score = 47.0 bits (110), Expect(2) = 3e-08
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +1
Query: 7 MSNETWEELD--ATSFNELHVSD*VMYSIMKEKTTEETRDMLEKFYMRKTLFNKLFLKDQ 180
M + WEEL A L +SD V+Y +M E + ++ + LE +M KT K++LK +
Sbjct: 359 MEADDWEELQLKAARTIRLFLSDQVIYHVMDENSPKKIWEKLESQFMSKTAMTKVYLKQK 418
Query: 181 LYGLRMKD 204
L+G+R+++
Sbjct: 419 LHGMRIQE 426
Score = 36.6 bits (83), Expect(2) = 3e-08
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +3
Query: 198 EGQDIIEHLNMFNWRFSDXXXXXXXXXXXXXXXXXT-SFPNSFKHFRITLMFYNETLKFE 374
EG D++E++N FN +D S P+S+ H TL ET+K E
Sbjct: 426 EGSDLVEYMNAFNQVVTDLARLGATVDDEDMAILLLCSLPSSYDHLITTLTHGKETIKNE 485
Query: 375 ELVRDLIFHVTMNKSSGNEAQGK*LIAK 458
++ L+ + K++ + G+ L+ K
Sbjct: 486 DITAALLSYDMRKKNAVEVSHGEGLLVK 513
>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 424
Score = 58.9 bits (141), Expect = 7e-07
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +1
Query: 1 ESMSNETWEEL--DATSFNELHVSD*VMYSIMKEKTTEETRDMLEKFYMRKTLFNKLFLK 174
E M WEE+ A + L +SD VMY +M EKT++E L YM K+L +KL+LK
Sbjct: 46 EKMDAGKWEEMKAQAAATIRLSLSDSVMYQVMDEKTSKEIWVKLTSLYMSKSLTSKLYLK 105
Query: 175 DQLYGLRMKD 204
QLYGL+M++
Sbjct: 106 QQLYGLQMQE 115
>ref|XP_006442418.1| hypothetical protein CICLE_v10023471mg, partial [Citrus clementina]
gi|557544680|gb|ESR55658.1| hypothetical protein
CICLE_v10023471mg, partial [Citrus clementina]
Length = 185
Score = 48.5 bits (114), Expect(2) = 2e-06
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = +1
Query: 4 SMSNETWEELD--ATSFNELHVSD*VMYSIMKEKTTEETRDMLEKFYMRKTLFNKLFLKD 177
S+S+E WEELD A S L ++ V+ ++ T +E + LEK Y K++ N+L+LK+
Sbjct: 27 SISDEDWEELDDRAASAIRLCLAKNVLANVGNIPTAKELWEKLEKLYQTKSISNRLYLKE 86
Query: 178 QLYGLRMKD 204
Q + LRM +
Sbjct: 87 QFHTLRMAE 95
Score = 28.5 bits (62), Expect(2) = 2e-06
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +3
Query: 198 EGQDIIEHLNMFNWRFSDXXXXXXXXXXXXXXXXXT-SFPNSFKHFRITLMFYNETLKFE 374
EG I +HL++ N S+ S P S+KH TLM+ E + E
Sbjct: 95 EGTKISDHLSVLNGIVSELEAIGVKIEDDDKALRLLWSLPTSYKHMLPTLMYGKEIVDLE 154
Query: 375 ELVRDLI 395
E+ L+
Sbjct: 155 EVTSTLL 161
>emb|CAD41329.2| OJ991113_30.13 [Oryza sativa Japonica Group]
Length = 353
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +1
Query: 7 MSNETWEELDATSFNELHVS--D*VMYSIMKEKTTEETRDMLEKFYMRKTLFNKLFLKDQ 180
M + W+E+ A + + +S D VMY +M EKT +E D L YM K+L +KL+LK Q
Sbjct: 1 MDADKWDEMKAQAAATIRLSLLDSVMYQVMDEKTPKEIWDKLASLYMSKSLTSKLYLKQQ 60
Query: 181 LYGLRMKD 204
YGL+M++
Sbjct: 61 SYGLQMQE 68
>ref|XP_007209839.1| hypothetical protein PRUPE_ppa014574mg [Prunus persica]
gi|462405574|gb|EMJ11038.1| hypothetical protein
PRUPE_ppa014574mg [Prunus persica]
Length = 157
Score = 39.3 bits (90), Expect(2) = 5e-06
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 195 DEGQDIIEHLNMFNWRFSDXXXXXXXXXXXXXXXXXTSF-PNSFKHFRITLMFYNETLKF 371
+EG ++EH++ FN ++ +F P S+KHFR+TLMF TLK+
Sbjct: 87 EEGASLMEHVSTFNRCIANLQRMDEVYKLEDKAVIFLTFLPLSYKHFRMTLMFSKGTLKY 146
Query: 372 EELV 383
++++
Sbjct: 147 KDVI 150
Score = 36.6 bits (83), Expect(2) = 5e-06
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +1
Query: 1 ESMSNETWEELDATSFNELHVSD*VMYSIMKEKTTEETRDMLEKFYMRKTLFNKLFLKDQ 180
++M++ W+ LD + SI + T EE LE+ + K+L NKLFLK++
Sbjct: 34 DTMTDVEWDNLDELAKG----------SIEQHLTNEEK---LEEMFESKSLSNKLFLKEE 80
Query: 181 LYGLRMKDRIS 213
L+ L+M++ S
Sbjct: 81 LHSLKMEEGAS 91