BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00012322
         (1400 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   270   9e-70
emb|CCH50966.1| T4.5 [Malus x robusta]                                269   3e-69
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]   265   3e-68
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              261   5e-67
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   259   2e-66
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   259   2e-66
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-...   258   3e-66
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   256   2e-65
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  256   2e-65
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc...   255   4e-65
gb|AAB82754.1| retrofit [Oryza longistaminata]                        253   1e-64
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]   253   1e-64
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...   252   2e-64
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   251   7e-64
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]   251   7e-64
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   251   7e-64
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]   249   2e-63
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]   249   2e-63
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   249   2e-63
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   248   5e-63

>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  270 bits (691), Expect = 9e-70
 Identities = 125/239 (52%), Positives = 179/239 (74%)
 Frame = -3

Query: 723  EPTSFSQASKFSEWRLAM*REFDALMSTNTWSLVPPASHQNIVGFRWIFKTKHLSDGFIE 544
            EPT+F+QA K S W LAM +EF AL   NTW LVPP S+ NI+G +W++K K+  DG ++
Sbjct: 711  EPTTFTQAVKDSNWVLAMEKEFSALQRNNTWHLVPPPSNGNIIGCKWVYKLKYKPDGTVD 770

Query: 543  *RKARLVAKGYSQLEGLDYKETFSPVIKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGHL 364
              KARLVA+G++Q  GL+Y ETFSPV+K +TIR++L++ +S  WS+ QLD+QNAFLHG L
Sbjct: 771  RYKARLVAQGFTQTLGLBYFETFSPVVKASTIRIILAVALSFNWSVHQLDVQNAFLHGDL 830

Query: 363  DEHVFMTQPPGFVHPKFPNYVCKLNRALYGLKQAPCAWYSKISQYLIFYGYQVSNSESSM 184
            +EHVFM QPPGF++ ++P++VCKLN+ALYGLKQAP AWY+K+S  L+ +G+Q S ++SSM
Sbjct: 831  EEHVFMQQPPGFINSQYPSHVCKLNKALYGLKQAPRAWYNKLSTSLLGWGFQASRADSSM 890

Query: 183  FVKLEDGMYAVVLSYVDDMIITRGNVAEITCLRDDLSIRFEMKILGEVAYFLGLEVKRA 7
            F+        ++L YVDD+++T  + A+++     L+  F ++ LG V YFLG+EV R+
Sbjct: 891  FIHHSTHDVLILLIYVDDILVTGSSSAQVSSFITRLNSSFALRDLGYVNYFLGIEVVRS 949



 Score =  104 bits (259), Expect = 1e-19
 Identities = 53/128 (41%), Positives = 71/128 (55%)
 Frame = -3

Query: 1398 PSPTLHNKSPFELLFHYKPDYLFLKTFDCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHH 1219
            P+  L+ +SPF++LF   P+Y   K F C C+P +RPYNKNK+ + S  CVFLGYS +H 
Sbjct: 528  PTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSSNHK 587

Query: 1218 GYMCFHVPTARMYISRDVLFDEHCFPFSDXXXXXXXXXXXXXXXXSLPFHLTPHSRLPSN 1039
            GYMC +  T R+Y++R V+F E  FPF                   LP    P S L S+
Sbjct: 588  GYMCLNPLTGRLYVTRHVVFHETVFPFQS-TPDQSSSVVTIPTPAFLPCSSPPVSSLRSH 646

Query: 1038 DNQSSSRP 1015
               S+S P
Sbjct: 647  TTPSTSSP 654


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  269 bits (687), Expect = 3e-69
 Identities = 142/275 (51%), Positives = 179/275 (65%)
 Frame = -3

Query: 831  MQTRSKTHTTCPKIRTDGTVSWPPPRAYITTSAVPEEPTSFSQASKFSEWRLAM*REFDA 652
            M TR+K     PK+ T        P    + +A+P  P++F QASK S W  AM  EF A
Sbjct: 1114 MITRAKAGIHKPKVFT--ATKHQLPSTVDSLTALPPTPSTFLQASKSSHWMEAMQFEFQA 1171

Query: 651  LMSTNTWSLVPPASHQNIVGFRWIFKTKHLSDGFIE*RKARLVAKGYSQLEGLDYKETFS 472
            L ST TW LVP  S  NIVG +W+FK KH  DG IE  KARLVAKG+ Q EGLD+ ETFS
Sbjct: 1172 LQSTGTWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARLVAKGFHQQEGLDFSETFS 1231

Query: 471  PVIKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGHLDEHVFMTQPPGFVHPKFPNYVCKL 292
            PV KPTTIR++LSI VS  W I QLD+ NAFLHGHL E V+M QPPGFV P  P++VCKL
Sbjct: 1232 PVAKPTTIRILLSIAVSYYWFIHQLDVSNAFLHGHLKEDVYMVQPPGFVDPSKPHHVCKL 1291

Query: 291  NRALYGLKQAPCAWYSKISQYLIFYGYQVSNSESSMFVKLEDGMYAVVLSYVDDMIITRG 112
             ++LYGLKQAP AWY      ++  G+  S+S++S+F+K  D     +L YVDD+IIT  
Sbjct: 1292 RKSLYGLKQAPRAWYEAFYTAILSLGFSSSHSDTSLFIK-RDTSITFILVYVDDIIITGS 1350

Query: 111  NVAEITCLRDDLSIRFEMKILGEVAYFLGLEVKRA 7
            +V E   +   L   F +K LG++ YFLG+EV ++
Sbjct: 1351 SVTECQSIISQLQTMFPVKDLGDINYFLGIEVHKS 1385



 Score = 95.5 bits (236), Expect = 5e-17
 Identities = 43/79 (54%), Positives = 56/79 (70%)
 Frame = -3

Query: 1374 SPFELLFHYKPDYLFLKTFDCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHHGYMCFHVP 1195
            SP+ELLFH  P Y  LK F C C+P L+PY+++K+ F S  CVFLGYS +H GY C+   
Sbjct: 940  SPWELLFHASPKYHTLKAFGCACYPWLQPYSRDKLDFKSKQCVFLGYSLNHSGYRCWDPI 999

Query: 1194 TARMYISRDVLFDEHCFPF 1138
            + R+YISR V+FDE  FP+
Sbjct: 1000 SNRLYISRHVVFDESLFPY 1018


>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score =  265 bits (678), Expect = 3e-68
 Identities = 124/239 (51%), Positives = 176/239 (73%)
 Frame = -3

Query: 723  EPTSFSQASKFSEWRLAM*REFDALMSTNTWSLVPPASHQNIVGFRWIFKTKHLSDGFIE 544
            EPT+F+ A K S W LAM +EF AL   NTW LVPP S+ NI+  +W++K K+  DG ++
Sbjct: 469  EPTTFTXAVKDSNWVLAMEKEFSALQRNNTWHLVPPPSNGNIIXCKWVYKLKYKPDGTVD 528

Query: 543  *RKARLVAKGYSQLEGLDYKETFSPVIKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGHL 364
              KARLVA+G++Q  GLDY ETFSP++K +TIR++L + +S  WS+ QLD+QNAFLHG L
Sbjct: 529  RYKARLVAQGFTQTLGLDYFETFSPIVKASTIRIILVVALSFNWSVHQLDVQNAFLHGTL 588

Query: 363  DEHVFMTQPPGFVHPKFPNYVCKLNRALYGLKQAPCAWYSKISQYLIFYGYQVSNSESSM 184
            +EHVFM QPPGF++ +FP++VCKLN+ALYGLKQAP AWY+K+S  L+ +G+Q S ++SSM
Sbjct: 589  EEHVFMHQPPGFINSQFPSHVCKLNKALYGLKQAPRAWYTKLSTSLLGWGFQASRADSSM 648

Query: 183  FVKLEDGMYAVVLSYVDDMIITRGNVAEITCLRDDLSIRFEMKILGEVAYFLGLEVKRA 7
            F+        ++L YVDD+++T  N A+++     L+  F ++ LG V YFLG++V R+
Sbjct: 649  FIHHSTHDVLILLIYVDDILVTGSNSAQVSSFITRLNSSFALRDLGYVNYFLGIKVVRS 707


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  261 bits (667), Expect = 5e-67
 Identities = 135/259 (52%), Positives = 177/259 (68%), Gaps = 2/259 (0%)
 Frame = -3

Query: 789  RTDGTVSWPPPR--AYITTSAVPEEPTSFSQASKFSEWRLAM*REFDALMSTNTWSLVPP 616
            R+   +S P P+   + T  A+P EPT ++QA+K+ EWR AM  EF AL    TW LVPP
Sbjct: 849  RSKHGISKPNPKYAMHSTLLALPLEPTCYTQAAKYPEWREAMDHEFKALQQAGTWFLVPP 908

Query: 615  ASHQNIVGFRWIFKTKHLSDGFIE*RKARLVAKGYSQLEGLDYKETFSPVIKPTTIRLVL 436
            +S  NI+  +W+F+ K  SDG +E  KARLVA G+ Q EGLDY ETFSPV+K +TIRLVL
Sbjct: 909  SSLMNILPNKWVFRIKKRSDGSVERYKARLVANGFHQQEGLDYTETFSPVVKHSTIRLVL 968

Query: 435  SIVVSLGWSIQQLDIQNAFLHGHLDEHVFMTQPPGFVHPKFPNYVCKLNRALYGLKQAPC 256
            ++ VS  W I+QLD+QN FLHG+L+E ++M Q  GFV PKFP +VCKL R+LYGLKQAP 
Sbjct: 969  ALAVSHRWPIRQLDVQNVFLHGYLNEDIYMKQHVGFVDPKFPQHVCKLRRSLYGLKQAPR 1028

Query: 255  AWYSKISQYLIFYGYQVSNSESSMFVKLEDGMYAVVLSYVDDMIITRGNVAEITCLRDDL 76
            AW+   S YL   G+  S ++ SMF     G+Y ++L YVDD++IT  N + I+ L  +L
Sbjct: 1029 AWFRCFSDYLEELGFLESRADYSMFTFNNRGIYIILLIYVDDILITGNNSSHISHLIHNL 1088

Query: 75   SIRFEMKILGEVAYFLGLE 19
            +  F MK LG V YFLG+E
Sbjct: 1089 NSLFSMKDLGSVHYFLGIE 1107



 Score =  104 bits (260), Expect = 8e-20
 Identities = 48/89 (53%), Positives = 59/89 (66%)
 Frame = -3

Query: 1398 PSPTLHNKSPFELLFHYKPDYLFLKTFDCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHH 1219
            PS  L+  SP+E LFH  P Y  LK F C C+P LRPYN +K+   S  CVFLGYS +H 
Sbjct: 600  PSRVLNYASPYEQLFHRVPQYHSLKVFGCACFPYLRPYNSSKLQLRSKRCVFLGYSLNHQ 659

Query: 1218 GYMCFHVPTARMYISRDVLFDEHCFPFSD 1132
            GY CF   + R+Y+SR VLFDE  FPF++
Sbjct: 660  GYRCFDPSSGRVYLSRHVLFDESSFPFTE 688


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  259 bits (663), Expect = 2e-66
 Identities = 128/276 (46%), Positives = 188/276 (68%)
 Frame = -3

Query: 828  QTRSKTHTTCPKIRTDGTVSWPPPRAYITTSAVPEEPTSFSQASKFSEWRLAM*REFDAL 649
            +TR ++     K+ TDGT+ +    ++ T S    EPT+  +A K   W+LAM  E+DAL
Sbjct: 914  RTRLQSGVRKEKVYTDGTIKYK--HSWFTASG---EPTNDLEALKDKNWKLAMDSEYDAL 968

Query: 648  MSTNTWSLVPPASHQNIVGFRWIFKTKHLSDGFIE*RKARLVAKGYSQLEGLDYKETFSP 469
            +   TW LVPP   +NI+G +W++K K  +DG ++  KARLVAKG+ Q  G+DY++TFSP
Sbjct: 969  VKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSP 1028

Query: 468  VIKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGHLDEHVFMTQPPGFVHPKFPNYVCKLN 289
            V+K  TIR++LS+ VS GWS++QLD+QNAFLHG+L+E V+M QPPGF  P  P++VCKL+
Sbjct: 1029 VVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLD 1088

Query: 288  RALYGLKQAPCAWYSKISQYLIFYGYQVSNSESSMFVKLEDGMYAVVLSYVDDMIITRGN 109
            +ALYGLKQAP AW+S++S+ L+  G++ S  ++S+F   +  +   VL YVDD+I+   +
Sbjct: 1089 KALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTSLFFLNKGDITMFVLVYVDDIIVASSS 1148

Query: 108  VAEITCLRDDLSIRFEMKILGEVAYFLGLEVKRAKD 1
                  L  DL   F +K LGE+ YFLG+EV + ++
Sbjct: 1149 EKATAALLQDLKGEFALKDLGELHYFLGIEVSKVQN 1184



 Score =  119 bits (298), Expect = 3e-24
 Identities = 52/89 (58%), Positives = 63/89 (70%)
 Frame = -3

Query: 1398 PSPTLHNKSPFELLFHYKPDYLFLKTFDCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHH 1219
            PS  +HN SP E LF  KPDY  L+ F C CWPNLRPYN +K+ F S  CVFLG+S  H 
Sbjct: 650  PSRVIHNISPLEKLFKQKPDYSSLRIFGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHK 709

Query: 1218 GYMCFHVPTARMYISRDVLFDEHCFPFSD 1132
            G+ C  V T R+YISRDV+FDE+ FPF++
Sbjct: 710  GFKCLEVSTGRIYISRDVVFDENIFPFTE 738


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  259 bits (662), Expect = 2e-66
 Identities = 127/265 (47%), Positives = 177/265 (66%)
 Frame = -3

Query: 795  KIRTDGTVSWPPPRAYITTSAVPEEPTSFSQASKFSEWRLAM*REFDALMSTNTWSLVPP 616
            K+ TDGTV +       T   V  EP + + A + + W+ AM  E++ALM+  TW LVPP
Sbjct: 919  KVYTDGTVKYKN-----TFLTVTGEPKNLTDALQNTNWKKAMDIEYEALMNNKTWHLVPP 973

Query: 615  ASHQNIVGFRWIFKTKHLSDGFIE*RKARLVAKGYSQLEGLDYKETFSPVIKPTTIRLVL 436
               +N++  +W++K K   DG ++  KARLVAKG+ Q  G+DY++TFSPV+K  TIR+VL
Sbjct: 974  KQGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVL 1033

Query: 435  SIVVSLGWSIQQLDIQNAFLHGHLDEHVFMTQPPGFVHPKFPNYVCKLNRALYGLKQAPC 256
            SI VS GW ++QLD+QNAFLHG L+E V+M QPPG+    FP YVCKL++ALYGLKQAP 
Sbjct: 1034 SIAVSRGWCMRQLDVQNAFLHGFLEEEVYMKQPPGYEDESFPGYVCKLDKALYGLKQAPR 1093

Query: 255  AWYSKISQYLIFYGYQVSNSESSMFVKLEDGMYAVVLSYVDDMIITRGNVAEITCLRDDL 76
            AWYS++S+ L   G+Q S  ++S+F   + G+   VL YVDD+I+T      ++ L  DL
Sbjct: 1094 AWYSRLSKKLYDLGFQGSKGDTSLFFYNKGGLIIFVLIYVDDIIVTSSRQEAVSALLQDL 1153

Query: 75   SIRFEMKILGEVAYFLGLEVKRAKD 1
               F +K LG++ YFLG+EV +  D
Sbjct: 1154 KKEFALKDLGDLHYFLGIEVNKVTD 1178



 Score =  102 bits (255), Expect = 3e-19
 Identities = 46/88 (52%), Positives = 57/88 (64%)
 Frame = -3

Query: 1398 PSPTLHNKSPFELLFHYKPDYLFLKTFDCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHH 1219
            P+  L   +P E LF+  PDY  L+ F C CWP+LRPYN +K+ F S  C FLGYS  H 
Sbjct: 656  PTKLLQFLTPLEHLFNQTPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTFLGYSTLHK 715

Query: 1218 GYMCFHVPTARMYISRDVLFDEHCFPFS 1135
            G+ C    T R+YISRDV+FDE  FPF+
Sbjct: 716  GFKCLDPSTGRVYISRDVIFDETNFPFA 743


>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  258 bits (660), Expect = 3e-66
 Identities = 127/276 (46%), Positives = 189/276 (68%)
 Frame = -3

Query: 828  QTRSKTHTTCPKIRTDGTVSWPPPRAYITTSAVPEEPTSFSQASKFSEWRLAM*REFDAL 649
            +TR ++     K+ TDGT+ +    ++ T S    EPT+  +A K   W+LAM  E+DAL
Sbjct: 636  RTRLQSGVRKEKVYTDGTIKYK--HSWFTASG---EPTNDLEALKDKNWKLAMDSEYDAL 690

Query: 648  MSTNTWSLVPPASHQNIVGFRWIFKTKHLSDGFIE*RKARLVAKGYSQLEGLDYKETFSP 469
            +   TW LVPP   +NI+G +W++K K  +DG ++  KARLVAKG+ Q  G+DY++TFSP
Sbjct: 691  VKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSP 750

Query: 468  VIKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGHLDEHVFMTQPPGFVHPKFPNYVCKLN 289
            V+K  TIR++LS+ VS GWS++QLD+QNAFLHG+L+E V+M QPPGF  P  P++VCKL+
Sbjct: 751  VVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLD 810

Query: 288  RALYGLKQAPCAWYSKISQYLIFYGYQVSNSESSMFVKLEDGMYAVVLSYVDDMIITRGN 109
            +ALYGLKQAP AW+S++S+ L+  G++ S +++S+F   +  +   VL YVDD+I+   +
Sbjct: 811  KALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKGDITMFVLVYVDDIIVASSS 870

Query: 108  VAEITCLRDDLSIRFEMKILGEVAYFLGLEVKRAKD 1
                  L  +L   F +K LGE+ YFLG+EV + ++
Sbjct: 871  EKATAALLQNLKGEFALKDLGELHYFLGIEVSKVQN 906


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  256 bits (654), Expect = 2e-65
 Identities = 132/272 (48%), Positives = 182/272 (66%)
 Frame = -3

Query: 825  TRSKTHTTCPKIRTDGTVSWPPPRAYITTSAVPEEPTSFSQASKFSEWRLAM*REFDALM 646
            TR +   + PK  TDGTV +      +TT+    EP +  +A   S WRLAM +E+ A M
Sbjct: 398  TRLQKGISKPKRYTDGTVRY----GCLTTTG---EPENLREAMANSNWRLAMEQEYSAFM 450

Query: 645  STNTWSLVPPASHQNIVGFRWIFKTKHLSDGFIE*RKARLVAKGYSQLEGLDYKETFSPV 466
            S  TW LVPP   +NI+  +W++K K  +DG I+  KARLVAKG+ Q  G+DY++TFS V
Sbjct: 451  SNKTWHLVPPTQGKNIIDCKWMYKIKRKADGSIDRYKARLVAKGFKQRYGIDYEDTFSLV 510

Query: 465  IKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGHLDEHVFMTQPPGFVHPKFPNYVCKLNR 286
            +K  TIRL+LSI VS GWS++QLD+QNAFLHG+L+E V+M QPPGF +   PNY+CKL++
Sbjct: 511  VKAATIRLILSIAVSKGWSLRQLDVQNAFLHGYLEEEVYMRQPPGFENKGQPNYLCKLDK 570

Query: 285  ALYGLKQAPCAWYSKISQYLIFYGYQVSNSESSMFVKLEDGMYAVVLSYVDDMIITRGNV 106
            ALYGLKQAP AWYS++S  L   G+  S +++S+F   + G    +L YVDD+I+   + 
Sbjct: 571  ALYGLKQAPRAWYSRLSTKLQELGFISSKADTSLFFYNKGGCTIFILVYVDDIIVASSSA 630

Query: 105  AEITCLRDDLSIRFEMKILGEVAYFLGLEVKR 10
              +  L  DL   F +K LG++ YFLG+EVK+
Sbjct: 631  EVVAALLKDLEKDFALKDLGDLHYFLGIEVKK 662


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  256 bits (654), Expect = 2e-65
 Identities = 129/272 (47%), Positives = 182/272 (66%)
 Frame = -3

Query: 825  TRSKTHTTCPKIRTDGTVSWPPPRAYITTSAVPEEPTSFSQASKFSEWRLAM*REFDALM 646
            TR ++     K+ TDGTV +     + +T     EP +  +A     W+ AM  E+DAL+
Sbjct: 900  TRLRSGIRKEKVYTDGTVKYG---CFTSTG----EPQNDKEALGDKNWKAAMEAEYDALI 952

Query: 645  STNTWSLVPPASHQNIVGFRWIFKTKHLSDGFIE*RKARLVAKGYSQLEGLDYKETFSPV 466
              +TW LVP    QN++G +W++K K  +DG ++  KARLVAKG+ Q  G+DY++TFSPV
Sbjct: 953  KNDTWHLVPYEKGQNVIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPV 1012

Query: 465  IKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGHLDEHVFMTQPPGFVHPKFPNYVCKLNR 286
            +K  TIR++LSI VS GWS++QLD+QNAFLHG L+E V+M QPPGF     PNYVCKL++
Sbjct: 1013 VKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESFSKPNYVCKLDK 1072

Query: 285  ALYGLKQAPCAWYSKISQYLIFYGYQVSNSESSMFVKLEDGMYAVVLSYVDDMIITRGNV 106
            ALYGLKQAP AWYS++S+ L+  G++ S +++S+F   + G+   VL YVDD+II     
Sbjct: 1073 ALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIIASSTE 1132

Query: 105  AEITCLRDDLSIRFEMKILGEVAYFLGLEVKR 10
               T L  DL+  F +K LG++ YFLG+EV +
Sbjct: 1133 KATTALLKDLNKEFALKDLGDLHYFLGIEVTK 1164



 Score =  118 bits (296), Expect = 5e-24
 Identities = 51/88 (57%), Positives = 64/88 (72%)
 Frame = -3

Query: 1398 PSPTLHNKSPFELLFHYKPDYLFLKTFDCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHH 1219
            PS T+ N +P E LF+ KPDYL L+ F C CWP+LRPYN +K+ F S  CVFLG+S  H 
Sbjct: 656  PSKTIQNSTPLEKLFNQKPDYLSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHK 715

Query: 1218 GYMCFHVPTARMYISRDVLFDEHCFPFS 1135
            G+ C  V + R+YISRDV+FDE+ FPFS
Sbjct: 716  GFKCLDVSSGRVYISRDVVFDENIFPFS 743


>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 900

 Score =  255 bits (651), Expect = 4e-65
 Identities = 131/272 (48%), Positives = 182/272 (66%)
 Frame = -3

Query: 825  TRSKTHTTCPKIRTDGTVSWPPPRAYITTSAVPEEPTSFSQASKFSEWRLAM*REFDALM 646
            TRS+     PK  TDGTV +      +T +    EP+S  +A   + W+ AM +EF AL+
Sbjct: 356  TRSQHGVHRPKKYTDGTVRY----GCLTETG---EPSSLQEALSSANWKQAMDKEFSALL 408

Query: 645  STNTWSLVPPASHQNIVGFRWIFKTKHLSDGFIE*RKARLVAKGYSQLEGLDYKETFSPV 466
               TW LVPP   +NI+  +W++K K  +DG I+  KARLVAKG+ Q  G+DY++TFSPV
Sbjct: 409  HNKTWHLVPPVKGKNIIDSKWVYKIKKKADGTIDRYKARLVAKGFKQRYGIDYEDTFSPV 468

Query: 465  IKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGHLDEHVFMTQPPGFVHPKFPNYVCKLNR 286
            +K  TIRLVLSI +S GWS++QLD+QNAFLHG+LDE V+M QPPGF   + P+++CKL++
Sbjct: 469  VKAATIRLVLSIAMSQGWSLRQLDVQNAFLHGYLDEEVYMRQPPGFEDARQPHFLCKLDK 528

Query: 285  ALYGLKQAPCAWYSKISQYLIFYGYQVSNSESSMFVKLEDGMYAVVLSYVDDMIITRGNV 106
            ALYGLKQAP AWYS++S+ L   G+  S +++S+F   +      VL YVDD+I+   + 
Sbjct: 529  ALYGLKQAPRAWYSRLSKKLQELGFSSSKADTSLFFYNKGHHKMFVLVYVDDIIVASSSS 588

Query: 105  AEITCLRDDLSIRFEMKILGEVAYFLGLEVKR 10
              +  L  DL   F +K LG++ YFLG+EVKR
Sbjct: 589  PAVNALLKDLEKDFALKDLGDLHYFLGIEVKR 620



 Score =  108 bits (270), Expect = 6e-21
 Identities = 49/88 (55%), Positives = 61/88 (69%)
 Frame = -3

Query: 1398 PSPTLHNKSPFELLFHYKPDYLFLKTFDCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHH 1219
            P   +H  +P   LF  +PDY  L+TF C CWPNLRPYN +K+ F S  CVFLGYSP H 
Sbjct: 89   PMKIIHYDTP-AYLFEEQPDYNALRTFGCACWPNLRPYNTHKLAFRSKQCVFLGYSPLHK 147

Query: 1218 GYMCFHVPTARMYISRDVLFDEHCFPFS 1135
            G+ C  V + R+YISRDV+FDE+ FPF+
Sbjct: 148  GFKCLEVNSGRVYISRDVVFDENIFPFA 175


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  253 bits (647), Expect = 1e-64
 Identities = 128/275 (46%), Positives = 183/275 (66%)
 Frame = -3

Query: 825  TRSKTHTTCPKIRTDGTVSWPPPRAYITTSAVPEEPTSFSQASKFSEWRLAM*REFDALM 646
            TR ++     K+ TDGTV +     + +T     EP +  +A     WR AM  E++AL+
Sbjct: 909  TRLRSGIRKEKVYTDGTVKYG---CFSSTG----EPQNDKEALGDKNWRDAMETEYNALI 961

Query: 645  STNTWSLVPPASHQNIVGFRWIFKTKHLSDGFIE*RKARLVAKGYSQLEGLDYKETFSPV 466
              +TW LVP    QNI+G +W++K K  +DG ++  KARLVAKG+ Q  G+DY++TFSPV
Sbjct: 962  KNDTWHLVPYEKGQNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPV 1021

Query: 465  IKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGHLDEHVFMTQPPGFVHPKFPNYVCKLNR 286
            +K  TIR++LSI VS GWS++QLD+QNAFLHG L+E V+M QPPGF     P+YVCKL++
Sbjct: 1022 VKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESSSKPDYVCKLDK 1081

Query: 285  ALYGLKQAPCAWYSKISQYLIFYGYQVSNSESSMFVKLEDGMYAVVLSYVDDMIITRGNV 106
            ALYGLKQAP AWYS++S+ L+  G++ S +++S+F   + G+   VL YVDD+I+     
Sbjct: 1082 ALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGILMFVLVYVDDIIVASSTE 1141

Query: 105  AEITCLRDDLSIRFEMKILGEVAYFLGLEVKRAKD 1
               T L  DL+  F +K LG++ YFLG+EV +  +
Sbjct: 1142 KATTALLKDLNKEFALKDLGDLHYFLGIEVTKVSN 1176



 Score =  116 bits (290), Expect = 3e-23
 Identities = 50/88 (56%), Positives = 63/88 (71%)
 Frame = -3

Query: 1398 PSPTLHNKSPFELLFHYKPDYLFLKTFDCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHH 1219
            PS T+ N +P E LF+ KPDY  L+ F C CWP+LRPYN +K+ F S  CVFLG+S  H 
Sbjct: 656  PSKTIQNSTPLEKLFNQKPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHK 715

Query: 1218 GYMCFHVPTARMYISRDVLFDEHCFPFS 1135
            G+ C  V + R+YISRDV+FDE+ FPFS
Sbjct: 716  GFKCLDVSSGRVYISRDVVFDENVFPFS 743


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score =  253 bits (646), Expect = 1e-64
 Identities = 120/238 (50%), Positives = 172/238 (72%)
 Frame = -3

Query: 723  EPTSFSQASKFSEWRLAM*REFDALMSTNTWSLVPPASHQNIVGFRWIFKTKHLSDGFIE 544
            EP ++SQASK   W  AM  E+ AL+  NTWSLVPP S  +IVG RWI+K K+  DG I+
Sbjct: 858  EPRTYSQASKNDSWVQAMNSEYQALLRNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSID 917

Query: 543  *RKARLVAKGYSQLEGLDYKETFSPVIKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGHL 364
              KARLVA+G++Q  G+DY +TFSPV+KP TIRL+L++ VS  WS++QLD++NAFL+G L
Sbjct: 918  RHKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRLILALAVSFQWSVRQLDVENAFLNGDL 977

Query: 363  DEHVFMTQPPGFVHPKFPNYVCKLNRALYGLKQAPCAWYSKISQYLIFYGYQVSNSESSM 184
            +E VFMTQP GFV+P +P YVCKL++ALYGLKQAP AW+ K+   L+ YG+Q S +++S+
Sbjct: 978  EEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQSSRADTSL 1037

Query: 183  FVKLEDGMYAVVLSYVDDMIITRGNVAEITCLRDDLSIRFEMKILGEVAYFLGLEVKR 10
            F+        ++L YVDD+++T  N   ++     L  +F ++ LG ++YFLG++ ++
Sbjct: 1038 FIFHTATDILILLVYVDDILVTGSNPMLVSHFISYLRTKFALRDLGPLSYFLGIQAQQ 1095



 Score =  104 bits (259), Expect = 1e-19
 Identities = 45/87 (51%), Positives = 62/87 (71%)
 Frame = -3

Query: 1398 PSPTLHNKSPFELLFHYKPDYLFLKTFDCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHH 1219
            P+  LH +SP + LFH  P+Y  L+ F C C+P+LRPY ++K+ + S  CVFLGY+P+H 
Sbjct: 679  PAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHK 738

Query: 1218 GYMCFHVPTARMYISRDVLFDEHCFPF 1138
            GY+C  V T R+YISR+V+F E  FPF
Sbjct: 739  GYLCLDVSTNRIYISRNVIFHESSFPF 765


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1478

 Score =  252 bits (644), Expect = 2e-64
 Identities = 119/241 (49%), Positives = 172/241 (71%)
 Frame = -3

Query: 723  EPTSFSQASKFSEWRLAM*REFDALMSTNTWSLVPPASHQNIVGFRWIFKTKHLSDGFIE 544
            EPT+  +A K   W+LAM  E+DAL+   TW LVPP   +NI+G +W++K K  +DG ++
Sbjct: 937  EPTNDLEALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLD 996

Query: 543  *RKARLVAKGYSQLEGLDYKETFSPVIKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGHL 364
              KARLVAKG+ Q  G+DY++TFSPV+K  TIR++LS+ VS GWS++QLD+QNAFLHG+L
Sbjct: 997  RYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYL 1056

Query: 363  DEHVFMTQPPGFVHPKFPNYVCKLNRALYGLKQAPCAWYSKISQYLIFYGYQVSNSESSM 184
            +E V+M QPPGF  P  P++VCKL++ALYGLKQAP AW+S++S+ L+  G++ S +++S+
Sbjct: 1057 EEEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSL 1116

Query: 183  FVKLEDGMYAVVLSYVDDMIITRGNVAEITCLRDDLSIRFEMKILGEVAYFLGLEVKRAK 4
            F   +  +   VL YVDD+I+   +      L  DL   F +K LGE+ YFLG+EV + +
Sbjct: 1117 FFLNKGDITMFVLVYVDDIIVASSSERATAALLQDLKGEFALKDLGELHYFLGIEVSKVQ 1176

Query: 3    D 1
            +
Sbjct: 1177 N 1177



 Score =  119 bits (298), Expect = 3e-24
 Identities = 52/89 (58%), Positives = 63/89 (70%)
 Frame = -3

Query: 1398 PSPTLHNKSPFELLFHYKPDYLFLKTFDCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHH 1219
            PS  +HN SP E LF  KPDY  L+ F C CWPNLRPYN +K+ F S  CVFLG+S  H 
Sbjct: 683  PSRVIHNISPLEKLFKQKPDYSSLRIFGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHK 742

Query: 1218 GYMCFHVPTARMYISRDVLFDEHCFPFSD 1132
            G+ C  V T R+YISRDV+FDE+ FPF++
Sbjct: 743  GFKCLEVSTGRIYISRDVVFDENIFPFTE 771


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  251 bits (640), Expect = 7e-64
 Identities = 128/276 (46%), Positives = 178/276 (64%)
 Frame = -3

Query: 828  QTRSKTHTTCPKIRTDGTVSWPPPRAYITTSAVPEEPTSFSQASKFSEWRLAM*REFDAL 649
            +TR +     PK+ TDGT+ +       T+S    EP   ++A     W+ AM  E+ AL
Sbjct: 776  RTRLQQGVRKPKVYTDGTIRY----GCFTSSG---EPYDLNEALGDVNWKDAMDIEYSAL 828

Query: 648  MSTNTWSLVPPASHQNIVGFRWIFKTKHLSDGFIE*RKARLVAKGYSQLEGLDYKETFSP 469
            M   TW LVPP   +N++G +W++K K  +DG ++  KARLVAKGY Q  G+DY +TFSP
Sbjct: 829  MKNKTWHLVPPKKGRNVIGCKWVYKIKRKADGSLDRYKARLVAKGYKQQYGIDYDDTFSP 888

Query: 468  VIKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGHLDEHVFMTQPPGFVHPKFPNYVCKLN 289
            V+K  TIR++LSI VS GWS+ QLD+QNAFLHG L+E V+M QPPG+      NYVCKL+
Sbjct: 889  VVKHATIRIILSIAVSRGWSLCQLDVQNAFLHGVLEEEVYMQQPPGYEDSTKLNYVCKLD 948

Query: 288  RALYGLKQAPCAWYSKISQYLIFYGYQVSNSESSMFVKLEDGMYAVVLSYVDDMIITRGN 109
            +ALYGLKQAP AWYS++S  L+  G+Q S +++S+F   +  +   VL YVDD+I+    
Sbjct: 949  KALYGLKQAPRAWYSRLSNKLLSLGFQASKADTSLFFYNKGSVTIFVLVYVDDIIVASST 1008

Query: 108  VAEITCLRDDLSIRFEMKILGEVAYFLGLEVKRAKD 1
                  L  DL+  F +K LG++ YFLG+EV + +D
Sbjct: 1009 HKATEALLSDLNKEFALKDLGDLNYFLGIEVNKVRD 1044



 Score =  115 bits (287), Expect = 6e-23
 Identities = 50/88 (56%), Positives = 62/88 (70%)
 Frame = -3

Query: 1398 PSPTLHNKSPFELLFHYKPDYLFLKTFDCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHH 1219
            P+  L+  +PFE LFH +PDY  L+ F C CWPNLRPYN +K+ F S  CVFLGYS  H 
Sbjct: 503  PTKILNLDTPFERLFHKQPDYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLHK 562

Query: 1218 GYMCFHVPTARMYISRDVLFDEHCFPFS 1135
            G+ C  V T R+Y+SRDV FDE+ FPF+
Sbjct: 563  GFKCLDVSTGRVYVSRDVTFDENFFPFA 590


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score =  251 bits (640), Expect = 7e-64
 Identities = 122/238 (51%), Positives = 163/238 (68%)
 Frame = -3

Query: 726  EEPTSFSQASKFSEWRLAM*REFDALMSTNTWSLVPPASHQNIVGFRWIFKTKHLSDGFI 547
            +EP  F  A+K  EW  AM  E  AL   +TW LVP   H N+VG RWIFKTK  SDG I
Sbjct: 838  KEPRGFKSAAKHPEWLSAMDDEIHALKKNDTWVLVPRPQHHNVVGCRWIFKTKLHSDGSI 897

Query: 546  E*RKARLVAKGYSQLEGLDYKETFSPVIKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGH 367
            E  KARLVA+G+SQ+ GLD+ +TFSPV++P T+R++LS+ V+ GW + QLD++NAFLHG 
Sbjct: 898  ERHKARLVAQGFSQVHGLDFGDTFSPVVRPATVRIILSLAVTSGWRLHQLDVKNAFLHGF 957

Query: 366  LDEHVFMTQPPGFVHPKFPNYVCKLNRALYGLKQAPCAWYSKISQYLIFYGYQVSNSESS 187
            L+E V+M QPPG+  P+FP +VC+L RALYGLKQAP AW+ + S +L+ +G+  S ++SS
Sbjct: 958  LNEEVYMEQPPGYTDPQFPQHVCRLKRALYGLKQAPRAWFHRFSSFLLKHGFHSSQADSS 1017

Query: 186  MFVKLEDGMYAVVLSYVDDMIITRGNVAEITCLRDDLSIRFEMKILGEVAYFLGLEVK 13
            +F          +L YVDDMIIT    + +      LS  F MK LG++ YFLG+EV+
Sbjct: 1018 LFFYHSSLGTVYLLLYVDDMIITGSTPSLVHTFITRLSNEFSMKDLGDLHYFLGVEVQ 1075



 Score =  101 bits (251), Expect = 9e-19
 Identities = 46/88 (52%), Positives = 59/88 (67%)
 Frame = -3

Query: 1398 PSPTLHNKSPFELLFHYKPDYLFLKTFDCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHH 1219
            P P+L  K+P+ELLF  +PDY  L+TF C C+P LR Y+ NK+   S PCVFLGYS  H 
Sbjct: 620  PPPSLAGKTPYELLFGKQPDYSMLRTFGCLCFPYLRDYSPNKLSPKSTPCVFLGYSTLHK 679

Query: 1218 GYMCFHVPTARMYISRDVLFDEHCFPFS 1135
            G+ C    T R+Y+SR V F EH FP++
Sbjct: 680  GFRCLDRKTHRVYVSRHVQFYEHTFPYN 707


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  251 bits (640), Expect = 7e-64
 Identities = 123/273 (45%), Positives = 181/273 (66%)
 Frame = -3

Query: 828  QTRSKTHTTCPKIRTDGTVSWPPPRAYITTSAVPEEPTSFSQASKFSEWRLAM*REFDAL 649
            +TR ++     K+ TDGTV W      +T++    EP +   A + + W+ AM  E+ AL
Sbjct: 894  RTRLQSGIRKEKVYTDGTVKW----GMLTSTG---EPENLQDALQNNNWKCAMDAEYMAL 946

Query: 648  MSTNTWSLVPPASHQNIVGFRWIFKTKHLSDGFIE*RKARLVAKGYSQLEGLDYKETFSP 469
            +  NTW LVPP   +N++  +W++K K   DG ++  KARLVAKG+ Q  G+DY++TFSP
Sbjct: 947  IKNNTWHLVPPQQGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSP 1006

Query: 468  VIKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGHLDEHVFMTQPPGFVHPKFPNYVCKLN 289
            V+K  TIR++LSI VS GW ++QLD+QNAFLHG L+E V+M QPPG+ +P  P+YVCKL+
Sbjct: 1007 VVKAATIRIILSIAVSRGWCLRQLDVQNAFLHGVLEEEVYMKQPPGYENPSTPDYVCKLD 1066

Query: 288  RALYGLKQAPCAWYSKISQYLIFYGYQVSNSESSMFVKLEDGMYAVVLSYVDDMIITRGN 109
            +ALYGLKQAP AWYS++S  L   G++ S +++S+F   +  +   +L YVDD+I+    
Sbjct: 1067 KALYGLKQAPRAWYSRLSGKLHDLGFKGSKADTSLFFYNKGSLTIFLLIYVDDIIVVSSR 1126

Query: 108  VAEITCLRDDLSIRFEMKILGEVAYFLGLEVKR 10
               ++ L  DL   F +K LG++ YFLG+EV +
Sbjct: 1127 KEAVSALLQDLQKEFALKDLGDLHYFLGIEVTK 1159



 Score =  114 bits (284), Expect = 1e-22
 Identities = 51/88 (57%), Positives = 60/88 (68%)
 Frame = -3

Query: 1398 PSPTLHNKSPFELLFHYKPDYLFLKTFDCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHH 1219
            PS  LH+ SP E L  +KPDY  L+ F C CWPNLRPYNK+K+ F S  C FLGYS  H 
Sbjct: 654  PSRVLHDVSPLERLLGHKPDYNALRVFGCACWPNLRPYNKHKLQFRSTTCTFLGYSTLHK 713

Query: 1218 GYMCFHVPTARMYISRDVLFDEHCFPFS 1135
            G+ C    T R+YISRDV+FDE  FPF+
Sbjct: 714  GFKCLDPSTGRVYISRDVVFDETQFPFT 741


>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
          Length = 1334

 Score =  249 bits (637), Expect = 2e-63
 Identities = 118/238 (49%), Positives = 170/238 (71%)
 Frame = -3

Query: 723  EPTSFSQASKFSEWRLAM*REFDALMSTNTWSLVPPASHQNIVGFRWIFKTKHLSDGFIE 544
            EP ++SQA K   W  AM  E+ AL+  NTWSLVPP S  +IVG RWI+K K+  DG I+
Sbjct: 858  EPRTYSQAXKNDSWVQAMNSEYQALLRNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSID 917

Query: 543  *RKARLVAKGYSQLEGLDYKETFSPVIKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGHL 364
              KARLVA+G++Q  G+DY +TFSPV+KP TIRL+L++ VS  WS++QLD++N FL+G L
Sbjct: 918  RHKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRLILALAVSFQWSVRQLDVENGFLNGDL 977

Query: 363  DEHVFMTQPPGFVHPKFPNYVCKLNRALYGLKQAPCAWYSKISQYLIFYGYQVSNSESSM 184
            +E VFMTQP GFV+P +P YVCKL++ALYGLKQAP AW+ K+   L+ YG+Q S +++S+
Sbjct: 978  EEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQSSRADTSL 1037

Query: 183  FVKLEDGMYAVVLSYVDDMIITRGNVAEITCLRDDLSIRFEMKILGEVAYFLGLEVKR 10
            F+        ++L YVDD+++T  N   ++     L  +F ++ LG ++YFLG++ ++
Sbjct: 1038 FIFHTATDILILLVYVDDILVTGSNPMLVSHFISYLRTKFALRDLGPLSYFLGIQAQQ 1095



 Score =  104 bits (259), Expect = 1e-19
 Identities = 45/87 (51%), Positives = 62/87 (71%)
 Frame = -3

Query: 1398 PSPTLHNKSPFELLFHYKPDYLFLKTFDCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHH 1219
            P+  LH +SP + LFH  P+Y  L+ F C C+P+LRPY ++K+ + S  CVFLGY+P+H 
Sbjct: 679  PAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHK 738

Query: 1218 GYMCFHVPTARMYISRDVLFDEHCFPF 1138
            GY+C  V T R+YISR+V+F E  FPF
Sbjct: 739  GYLCLDVSTNRIYISRNVIFHESSFPF 765


>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
          Length = 773

 Score =  249 bits (637), Expect = 2e-63
 Identities = 118/238 (49%), Positives = 170/238 (71%)
 Frame = -3

Query: 723 EPTSFSQASKFSEWRLAM*REFDALMSTNTWSLVPPASHQNIVGFRWIFKTKHLSDGFIE 544
           EP ++SQA K   W  AM  E+ AL+  NTWSLVPP S  +IVG RWI+K K+  DG I+
Sbjct: 205 EPRTYSQAFKNDSWVQAMNSEYQALLRNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSID 264

Query: 543 *RKARLVAKGYSQLEGLDYKETFSPVIKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGHL 364
             KARLVA+G++Q  G+DY +TFSPV+KP TIRL+L++ VS  WS++QLD++N FL+G L
Sbjct: 265 RHKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRLILALAVSFQWSVRQLDVENGFLNGDL 324

Query: 363 DEHVFMTQPPGFVHPKFPNYVCKLNRALYGLKQAPCAWYSKISQYLIFYGYQVSNSESSM 184
           +E VFMTQP GFV+P +P YVCKL++ALYGLKQAP AW+ K+   L+ YG+Q S +++S+
Sbjct: 325 EEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQSSRADTSL 384

Query: 183 FVKLEDGMYAVVLSYVDDMIITRGNVAEITCLRDDLSIRFEMKILGEVAYFLGLEVKR 10
           F+        ++L YVDD+++T  N   ++     L  +F ++ LG ++YFLG++ ++
Sbjct: 385 FIFHTATDILILLVYVDDILVTGSNPTLVSHFISYLRTKFALRDLGPLSYFLGIQAQQ 442



 Score =  104 bits (259), Expect = 1e-19
 Identities = 45/87 (51%), Positives = 62/87 (71%)
 Frame = -3

Query: 1398 PSPTLHNKSPFELLFHYKPDYLFLKTFDCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHH 1219
            P+  LH +SP + LFH  P+Y  L+ F C C+P+LRPY ++K+ + S  CVFLGY+P+H 
Sbjct: 26   PAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHK 85

Query: 1218 GYMCFHVPTARMYISRDVLFDEHCFPF 1138
            GY+C  V T R+YISR+V+F E  FPF
Sbjct: 86   GYLCLDVSTNRIYISRNVIFHESSFPF 112


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  249 bits (637), Expect = 2e-63
 Identities = 126/272 (46%), Positives = 175/272 (64%)
 Frame = -3

Query: 825  TRSKTHTTCPKIRTDGTVSWPPPRAYITTSAVPEEPTSFSQASKFSEWRLAM*REFDALM 646
            TR ++     K+ TDGTV +       T   V  EP +   A K + W+ AM  EF AL 
Sbjct: 709  TRLQSGIRKEKVYTDGTVKYRT-----TFLTVTGEPENLDDALKDNNWKKAMDAEFMALQ 763

Query: 645  STNTWSLVPPASHQNIVGFRWIFKTKHLSDGFIE*RKARLVAKGYSQLEGLDYKETFSPV 466
            +  TW LVPP   +N++  +W++K K   DG ++  KARLVAKG+ Q  G+DY++TFSPV
Sbjct: 764  NNKTWHLVPPQKGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPV 823

Query: 465  IKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGHLDEHVFMTQPPGFVHPKFPNYVCKLNR 286
            +K  TIR++LSI VS GW ++QLD+QNAFLHG L+E V+M QPPG+     P YVCKL++
Sbjct: 824  VKAATIRIILSIAVSKGWCMRQLDVQNAFLHGVLEEEVYMKQPPGYEDSSLPGYVCKLDK 883

Query: 285  ALYGLKQAPCAWYSKISQYLIFYGYQVSNSESSMFVKLEDGMYAVVLSYVDDMIITRGNV 106
            ALYGLKQAP AWYS++S+ L   G+Q S +++S+F   +  +   VL YVDD+I+T    
Sbjct: 884  ALYGLKQAPRAWYSRLSKKLYDMGFQGSKADTSLFFYNKGDLIIFVLIYVDDIIVTSSRQ 943

Query: 105  AEITCLRDDLSIRFEMKILGEVAYFLGLEVKR 10
              +  L  DL   F +K LG++ YFLG+EV +
Sbjct: 944  EAVPALLRDLQKEFALKDLGDLHYFLGIEVTK 975



 Score =  106 bits (265), Expect = 2e-20
 Identities = 47/88 (53%), Positives = 56/88 (63%)
 Frame = -3

Query: 1398 PSPTLHNKSPFELLFHYKPDYLFLKTFDCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHH 1219
            PS  L   +P E LF   PDY  L+ F C CWP+LRPYN  K+ F S  C FLGYSP H 
Sbjct: 454  PSRLLKYATPLERLFKQTPDYNLLRVFGCACWPHLRPYNARKLQFRSKQCTFLGYSPLHK 513

Query: 1218 GYMCFHVPTARMYISRDVLFDEHCFPFS 1135
            G+ C    T R+YIS DV+FDE+ FPF+
Sbjct: 514  GFKCLDPSTGRVYISHDVIFDENVFPFA 541


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  248 bits (633), Expect = 5e-63
 Identities = 125/275 (45%), Positives = 180/275 (65%)
 Frame = -3

Query: 825  TRSKTHTTCPKIRTDGTVSWPPPRAYITTSAVPEEPTSFSQASKFSEWRLAM*REFDALM 646
            TR ++     K+ T+GTV +     + +T     EP +  +A     WR AM  E++AL+
Sbjct: 912  TRLRSGIRKEKVYTNGTVKYG---CFSSTG----EPQNDKEALGDKNWRDAMETEYNALI 964

Query: 645  STNTWSLVPPASHQNIVGFRWIFKTKHLSDGFIE*RKARLVAKGYSQLEGLDYKETFSPV 466
              +TW LVP    QNI+G +W++K K  +DG ++  K RL+AKG+ Q  G+DY++TFSPV
Sbjct: 965  KNDTWHLVPYEKGQNIIGCKWVYKVKRKADGTLDRYKTRLIAKGFKQRYGIDYEDTFSPV 1024

Query: 465  IKPTTIRLVLSIVVSLGWSIQQLDIQNAFLHGHLDEHVFMTQPPGFVHPKFPNYVCKLNR 286
            +K  TIR++LSI VS GWS++QLD+QN FLHG L+E V+M QPPGF     P+YVCKLN+
Sbjct: 1025 VKAATIRIILSIAVSRGWSLRQLDVQNDFLHGFLEEEVYMQQPPGFESSSKPDYVCKLNK 1084

Query: 285  ALYGLKQAPCAWYSKISQYLIFYGYQVSNSESSMFVKLEDGMYAVVLSYVDDMIITRGNV 106
            ALYGLKQAP AWYS++S+ L   G++ S +++S+F   + G+   VL YVDD+I+     
Sbjct: 1085 ALYGLKQAPRAWYSRLSKKLTELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIVASSTE 1144

Query: 105  AEITCLRDDLSIRFEMKILGEVAYFLGLEVKRAKD 1
               T L  DL+  F +K LG++ YFLG+EV +  +
Sbjct: 1145 KATTALLKDLNKEFTLKDLGDLHYFLGIEVTKVSN 1179



 Score =  110 bits (275), Expect = 1e-21
 Identities = 48/88 (54%), Positives = 61/88 (69%)
 Frame = -3

Query: 1398 PSPTLHNKSPFELLFHYKPDYLFLKTFDCQCWPNLRPYNKNKMHFWSLPCVFLGYSPSHH 1219
            PS T+ N +P E LF+ KPDY  L+ F C CWP+L PYN +K+ F S  CVFLG+S  H 
Sbjct: 659  PSKTIQNSTPLEKLFNQKPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHK 718

Query: 1218 GYMCFHVPTARMYISRDVLFDEHCFPFS 1135
            G+    V + R+YISRDV+FDE+ FPFS
Sbjct: 719  GFKFLDVSSGRVYISRDVVFDENVFPFS 746