BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00010238
         (4252 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_840097.3| RNA-dependent RNA polymerase P1-P2 fusion prote...   844   0.0  
gb|AFM68932.1| P1-P2 fusion protein [Cucurbit aphid-borne yellow...   839   0.0  
ref|YP_001949870.2| P1-P2 fusion protein [Melon aphid-borne yell...   837   0.0  
gb|AFM68938.1| P1-P2 fusion protein [Melon aphid-borne yellows v...   837   0.0  
gb|ABV55637.1| P1-P2 fusion protein [Melon aphid-borne yellows v...   837   0.0  
gb|ACF48393.1| P1 protein-P2 fusion protein [Beet western yellow...   834   0.0  
gb|ACF48399.1| P1 protein-P2 fusion protein [Beet western yellow...   832   0.0  
gb|ADR74371.1| P1-P2 fusion protein [Beet western yellows virus]      826   0.0  
gb|AEI55845.1| P1-P2 fusion protein [Cucurbit aphid-borne yellow...   823   0.0  
gb|ADR74377.1| P1-P2 fusion protein [Beet western yellows virus]      802   0.0  
gb|AGD99099.1| P1P2 protein [Beet mild yellowing virus]               800   0.0  
gb|AAZ57426.1| P1-P2 [Beet mild yellowing virus]                      795   0.0  
ref|NP_620479.2| Fusion protein [Beet mild yellowing virus]           795   0.0  
gb|AFM68928.1| P1-P2 fusion protein [Cucurbit aphid-borne yellow...   789   0.0  
ref|NP_620101.2| replicase fusion protein [Cucurbit aphid-borne ...   787   0.0  
emb|CAA54251.2| unnamed protein product [Cucurbit aphid-borne ye...   786   0.0  
gb|ADE48860.1| P1-P2 fusion protein [Cucurbit aphid-borne yellow...   788   0.0  
gb|ABV55642.1| P1-P2 fusion protein [Cucurbit aphid-borne yellow...   788   0.0  
gb|AFK28058.1| replicase fusion protein [Cucurbit aphid-borne ye...   782   0.0  
gb|AFK28046.1| replicase fusion protein [Cucurbit aphid-borne ye...   780   0.0  

>ref|NP_840097.3| RNA-dependent RNA polymerase P1-P2 fusion protein [Beet western
            yellows virus]
          Length = 1060

 Score =  844 bits (2181), Expect(2) = 0.0
 Identities = 411/625 (65%), Positives = 485/625 (77%)
 Frame = +3

Query: 1509 NAGGRKSGTDHRKNRTGNGYHRAKRQGEDWARRNTSRCCSFYTEGTLGPRCHPSHTHDPD 1688
            ++G R+SG+  R NR     H   R+ + W RRN   CCS++TEGTLGPRCH SH H PD
Sbjct: 441  SSGNRESGSARRNNRNPQRKHPQGRR-KQW-RRNPPSCCSYFTEGTLGPRCHASHVHTPD 498

Query: 1689 NYYAPRCHCTIPGHACFYRKYLGHGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENAQTE 1868
            +   P C C +P H CF+R++            + +  E  RG  C    E+ PE+    
Sbjct: 499  DEGQPGCWCEVPNHDCFFRRFQRDQRSHPAEDRYSFDREAGRGDPCREGNEETPES---R 555

Query: 1869 AKTWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGRQLIR 2048
            A+    +AE+F +YF+S Y+W  E      APGF+Q+G LP+FYHP+QKGE+ WG ++++
Sbjct: 556  AEKICEQAENFCQYFSSLYRW--ESGSGKEAPGFEQIGSLPQFYHPKQKGESRWGAKVLQ 613

Query: 2049 DHPELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTVEAYQ 2228
             HPELE QT GFGWP+FGA+AEL SLRLQA+RWLERA+ VKIPS+E+RERVI K  EAYQ
Sbjct: 614  LHPELEAQTRGFGWPQFGAQAELKSLRLQAARWLERAQQVKIPSTEERERVIRKCCEAYQ 673

Query: 2229 NVKTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDPKLLP 2408
            N K+NGP ATR  +L W NFLEDFKQAVFSLE DAG+GVPYIAYG P HR WVED +LLP
Sbjct: 674  NAKSNGPNATRGNKLSWDNFLEDFKQAVFSLEFDAGIGVPYIAYGKPTHRGWVEDQELLP 733

Query: 2409 VLAQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRLIMSV 2588
            +LA+ TFIRLQKMLE   + +S E+LVQ G+CDPIR+FVKGEPHK +KL EGRYRLIMSV
Sbjct: 734  ILARLTFIRLQKMLEARFEELSPEQLVQEGLCDPIRVFVKGEPHKQSKLDEGRYRLIMSV 793

Query: 2589 SLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTREIIG 2768
            SLVDQLVARVLFQNQNKREIALWRA+PSKPGFGLSTD+QVVEFV +LSAQV V   ++I 
Sbjct: 794  SLVDQLVARVLFQNQNKREIALWRAVPSKPGFGLSTDEQVVEFVQMLSAQVKVRPPQLIS 853

Query: 2769 NWPSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSVLCLS 2948
            +W  +L+ TDCSGFDWSVSDWLL DDMEVRNRLT DLNE T +LRA+WLKCISNSVLCLS
Sbjct: 854  DWRQHLVATDCSGFDWSVSDWLLEDDMEVRNRLTTDLNETTSKLRAAWLKCISNSVLCLS 913

Query: 2949 DGRLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLSKYSS 3128
            DG LL+QRVPGVQK           RIRVMAA+HCGA+WA+AMGDDALESV TDL KY++
Sbjct: 914  DGTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAFHCGAEWAMAMGDDALESVSTDLGKYAA 973

Query: 3129 LGFKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAACFSV 3308
            LGFKVE S +LEFCSHIF+ E+LA+PVNKAKM+YKLIHGYEP CGN EVLVNYL ACF++
Sbjct: 974  LGFKVEESSKLEFCSHIFEREDLAVPVNKAKMIYKLIHGYEPECGNPEVLVNYLTACFAI 1033

Query: 3309 FNELRSDPNLVATLYQWLVTPVQPQ 3383
             NELRSDP +V TLY WLV PVQPQ
Sbjct: 1034 LNELRSDPQMVQTLYSWLVKPVQPQ 1058



 Score =  345 bits (885), Expect(2) = 0.0
 Identities = 174/407 (42%), Positives = 242/407 (59%)
 Frame = +1

Query: 214  ANNWGITSYIPPVGVNVAGYGDFSPFLGRNLTLQLTSQLTYEPHKPTMLPDHSYKELGAA 393
            A+++  TS + P   NV  +  ++  +  +   Q  +QLTY+   P  L D+S  E+   
Sbjct: 18   ASSYKGTSVMSPGAANVTVWPGYTKPVAPHYIPQ--AQLTYDCPPPKTLQDYSSHEMLHE 75

Query: 394  ILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAKSTLDFVLTSIVYYWAFTLWLLICT 573
            +  +   + ++  L  +     +   G      ++   L +VL    Y W+  +W  +C 
Sbjct: 76   VWGRGSTNTKTSLLRVKTSLIDFCRSGVPMLSAVSHKLLKYVLRGTTYVWSSLIWASLCA 135

Query: 574  IWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGWPIYLIAGLSAILKFIFRNPLSKTP 753
            +W  I EYT+               VK   WIFG WPI+L      IL+ I R    +  
Sbjct: 136  LWFLIREYTVEVLMLGSLYVFTVFMVKIAAWIFGAWPIFLFNVGLTILRSISRVLWFRRS 195

Query: 754  YKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHAGYATCISLFDGTTGLLTAYHLVNEG 933
            YK EK+V+GF +F+I Q PP+N VL++ H D SHAGYATC++L++GTTGLLTA H+V+ G
Sbjct: 196  YKCEKSVEGFLSFKIPQSPPKNSVLQVQHPDGSHAGYATCVTLYNGTTGLLTAQHVVSSG 255

Query: 934  SQVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPPNWTGLLACKSAHFTPATQLAKSNAT 1113
             +VVST NGN IPL  F     S  RD +LM GPPNW G LACK+ +F  A+ L KS A+
Sbjct: 256  CKVVSTRNGNKIPLSEFKVEIESPTRDLMLMTGPPNWEGTLACKAVNFQTASNLCKSKAS 315

Query: 1114 IFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCGHSGAPYFNGKTVLGVHVGGGKNENC 1293
             F    + W ++NA+I G++    FVSVLSNTD GHSG PYFNGKT+LGVH+GG K EN 
Sbjct: 316  FFTFNGEAWESSNAEITGISPCRKFVSVLSNTDPGHSGTPYFNGKTLLGVHIGGAKEENA 375

Query: 1294 NYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVEALLEDFGLEEIR 1434
            NY++ +PP  G T+P YVFETTAP G++FT+EE+  L ED+ L E+R
Sbjct: 376  NYLAPVPPRAGLTTPNYVFETTAPQGRIFTEEEIRELAEDYSLSEVR 422


>gb|AFM68932.1| P1-P2 fusion protein [Cucurbit aphid-borne yellows virus]
          Length = 1056

 Score =  839 bits (2167), Expect(2) = 0.0
 Identities = 414/623 (66%), Positives = 485/623 (77%)
 Frame = +3

Query: 1515 GGRKSGTDHRKNRTGNGYHRAKRQGEDWARRNTSRCCSFYTEGTLGPRCHPSHTHDPDNY 1694
            G RK G D   NR    +   +R+     +RN + CCSF+TEGTL PR   SH H+P N 
Sbjct: 443  GNRKRGGDRANNRPTLSHPGQRRKQY---KRNINNCCSFFTEGTLAPRTIASHEHEPWND 499

Query: 1695 YAPRCHCTIPGHACFYRKYLGHGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENAQTEAK 1874
              PRC C IPGH CF+R ++G+     G +    +P  +R +GCG+  E+G E ++ EA 
Sbjct: 500  EKPRCFCAIPGHDCFFRNFIGNQERNTGEN----KPPVNREAGCGSLDEEGHEESRKEAT 555

Query: 1875 TWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGRQLIRDH 2054
                +AEDF ++F S Y W  E      APGF+QVG LP+FYHP+QK  + WG ++ R H
Sbjct: 556  K--RQAEDFQRFFDSQYTW--EPGSGREAPGFKQVGRLPEFYHPKQKTGSKWGAKICRQH 611

Query: 2055 PELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTVEAYQNV 2234
            PE+   T GFGWP+FGA+AEL SLRLQA+RWLERA+ VKIPSSE+RERVI K  EAY+N 
Sbjct: 612  PEMGTYTQGFGWPQFGAQAELKSLRLQAARWLERAQSVKIPSSEERERVIRKCCEAYKNA 671

Query: 2235 KTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDPKLLPVL 2414
            KT GP ATR   L W+ FLEDFKQAVFSLE DAG+GVPYIAYG P HR WVEDPKLLP+L
Sbjct: 672  KTIGPNATRGDSLSWEGFLEDFKQAVFSLEFDAGIGVPYIAYGRPTHRGWVEDPKLLPIL 731

Query: 2415 AQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRLIMSVSL 2594
            A+ TF RLQKMLEV  + +S  ELVQ G+CDPIR+FVKGEPHK +KL EGRYRLIMSVSL
Sbjct: 732  ARLTFNRLQKMLEVRFEHLSPAELVQAGLCDPIRVFVKGEPHKQSKLDEGRYRLIMSVSL 791

Query: 2595 VDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTREIIGNW 2774
            +DQLVARVLFQNQNKREI LWRA+PSKPGFGLSTD+QVVEF+ +LSAQVGV  +E+IGNW
Sbjct: 792  IDQLVARVLFQNQNKREITLWRAVPSKPGFGLSTDEQVVEFMRILSAQVGVAPKELIGNW 851

Query: 2775 PSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSVLCLSDG 2954
              +LI TDCSGFDWSVSDWLL DDMEVRNRLT+D+NE T RLR++WLKCISNSVL LSDG
Sbjct: 852  QHHLIATDCSGFDWSVSDWLLEDDMEVRNRLTLDINETTKRLRSAWLKCISNSVLSLSDG 911

Query: 2955 RLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLSKYSSLG 3134
             LLSQ+VPGVQK           RIRVMAAYHCGA+WA+AMGDDALESV ++L+KY+ LG
Sbjct: 912  TLLSQQVPGVQKSGSYNTSSSNSRIRVMAAYHCGAEWAMAMGDDALESVGSNLAKYAELG 971

Query: 3135 FKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAACFSVFN 3314
            FKVEVS +LEFCSHIF+ E+LA+PVNKAKM+YKLIHGYEP CGN EVL+NYLAACFSV N
Sbjct: 972  FKVEVSSKLEFCSHIFEREDLAVPVNKAKMIYKLIHGYEPECGNAEVLINYLAACFSVLN 1031

Query: 3315 ELRSDPNLVATLYQWLVTPVQPQ 3383
            ELRSDP LV+TL+QWLV PVQPQ
Sbjct: 1032 ELRSDPQLVSTLHQWLVLPVQPQ 1054



 Score =  322 bits (824), Expect(2) = 0.0
 Identities = 163/382 (42%), Positives = 229/382 (59%), Gaps = 1/382 (0%)
 Frame = +1

Query: 322  SQLTYEPHKPTMLPDHSYKELGAAILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAK 501
            +QL Y+     ML D S +++   +  + Y + R           +  + G   +    +
Sbjct: 52   AQLIYDCPPQKMLRDFSSRDITRELWERGYNETRQAFSEVMQSLQNLLMSGVRRSRAGLE 111

Query: 502  STLDFVLTSIVYYWAFTLWLLICTIWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGW 681
            S L        Y W+  +W   C IW  I EYT+               VK + WIFG  
Sbjct: 112  SLLHVTFRVTTYLWSSLIWASACAIWYLIREYTIEMLLLASLYMCTVYMVKMLAWIFGDL 171

Query: 682  PIYLI-AGLSAILKFIFRNPLSKTPYKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHA 858
            PI+L+ AGLS   + I R    +  YK EK+V+GF +F+I Q PP   VL++ H D SHA
Sbjct: 172  PIFLLKAGLSTA-RGISRVLWFRRNYKAEKSVEGFLSFKIPQTPPGKSVLQVQHQDGSHA 230

Query: 859  GYATCISLFDGTTGLLTAYHLVNEGSQVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPP 1038
            GYATC++L++G+TGL+TA+H++  G+++VST NG+ IP+  F     +  RD +LM GPP
Sbjct: 231  GYATCVALYNGSTGLITAHHVITPGAKIVSTRNGSKIPVSEFRIKLENSKRDLILMTGPP 290

Query: 1039 NWTGLLACKSAHFTPATQLAKSNATIFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCG 1218
            NW G LACK++    A  L KS AT F    + W ++NA+I GV+A  N+VSVLSNTD G
Sbjct: 291  NWEGALACKASQMQTANNLCKSKATFFAWNGEDWESSNAEIVGVSACRNYVSVLSNTDPG 350

Query: 1219 HSGAPYFNGKTVLGVHVGGGKNENCNYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVE 1398
            HSG PYFNGKT+LGVH+GG  +EN NY++ IP + G TSPKYVFETTAP G++F DEE+ 
Sbjct: 351  HSGTPYFNGKTLLGVHIGGANDENANYLAPIPAVPGLTSPKYVFETTAPQGRLFNDEEIA 410

Query: 1399 ALLEDFGLEEIRWMAKNKSERQ 1464
            AL+E+F + E+  + K +  +Q
Sbjct: 411  ALIEEFSMSEVASIMKARKGKQ 432


>ref|YP_001949870.2| P1-P2 fusion protein [Melon aphid-borne yellows virus]
          Length = 1056

 Score =  837 bits (2163), Expect(2) = 0.0
 Identities = 412/623 (66%), Positives = 485/623 (77%)
 Frame = +3

Query: 1515 GGRKSGTDHRKNRTGNGYHRAKRQGEDWARRNTSRCCSFYTEGTLGPRCHPSHTHDPDNY 1694
            G R+ G D   NR    +   +R+     +RN + CCSF+TEGTL PR   SH H+P N 
Sbjct: 443  GNRRRGGDRANNRPTLSHPGQRRKQY---KRNINNCCSFFTEGTLAPRTIASHEHEPWND 499

Query: 1695 YAPRCHCTIPGHACFYRKYLGHGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENAQTEAK 1874
              PRC C IPGH CF+R ++G+     G +    +P  +R +GCG+  E+G E ++ EA 
Sbjct: 500  EKPRCFCAIPGHDCFFRNFIGNQERNTGEN----KPPVNREAGCGSLDEEGHEESRKEAT 555

Query: 1875 TWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGRQLIRDH 2054
                +AEDF ++F S Y W  E      APGF+QVG LP+FYHP+QK  + WG ++ R H
Sbjct: 556  K--RQAEDFQRFFDSQYTW--EPGSGKEAPGFKQVGRLPEFYHPKQKTGSKWGAKICRQH 611

Query: 2055 PELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTVEAYQNV 2234
            PE++  T GFGWP+FGA+AEL SLRLQA+RWLERA+ VKIPSSE+RERVI K  EAY+N 
Sbjct: 612  PEMDAYTQGFGWPQFGAQAELKSLRLQAARWLERAQSVKIPSSEERERVIRKCCEAYRNA 671

Query: 2235 KTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDPKLLPVL 2414
            KT GP ATR   L W+ FLEDFKQAVFSLE DAG+GVPYIAYG P HR WVEDPKLLP+L
Sbjct: 672  KTIGPNATRGDSLSWEGFLEDFKQAVFSLEFDAGIGVPYIAYGRPTHRGWVEDPKLLPIL 731

Query: 2415 AQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRLIMSVSL 2594
            A+ TF RLQKMLEV  + +S  ELVQ G+CDPIR+FVKGEPHK +KL EGRYRLIMSVSL
Sbjct: 732  ARLTFNRLQKMLEVRFEHLSPAELVQAGLCDPIRVFVKGEPHKQSKLDEGRYRLIMSVSL 791

Query: 2595 VDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTREIIGNW 2774
            +DQLVARVLFQNQNKREI LWRA+PSKPGFGLSTD+QVVEF+ +LSAQVGV  +E+IGNW
Sbjct: 792  IDQLVARVLFQNQNKREITLWRAVPSKPGFGLSTDEQVVEFMEILSAQVGVAPKELIGNW 851

Query: 2775 PSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSVLCLSDG 2954
              +LI TDCSGFDWSVSDWLL DDMEVRNRLT+D+NE T RLR++WLKCISNSVL LSDG
Sbjct: 852  QHHLIATDCSGFDWSVSDWLLEDDMEVRNRLTLDINETTKRLRSAWLKCISNSVLSLSDG 911

Query: 2955 RLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLSKYSSLG 3134
             LLSQ+VPGVQK           RIRVMAAYHCGA+WA+AMGDDALESV ++L+KY+ LG
Sbjct: 912  TLLSQQVPGVQKSGSYNTSSSNSRIRVMAAYHCGAEWAMAMGDDALESVGSNLAKYAELG 971

Query: 3135 FKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAACFSVFN 3314
            FKVEVS +LEFCSHIF+ E+LAIPVNKAKM+YKLIHGYEP CGN EVL+NYL ACF+V N
Sbjct: 972  FKVEVSSKLEFCSHIFEREDLAIPVNKAKMIYKLIHGYEPECGNAEVLINYLTACFAVLN 1031

Query: 3315 ELRSDPNLVATLYQWLVTPVQPQ 3383
            ELRSDP LV+TL+QWLV PVQPQ
Sbjct: 1032 ELRSDPQLVSTLHQWLVLPVQPQ 1054



 Score =  319 bits (817), Expect(2) = 0.0
 Identities = 164/382 (42%), Positives = 227/382 (59%), Gaps = 1/382 (0%)
 Frame = +1

Query: 322  SQLTYEPHKPTMLPDHSYKELGAAILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAK 501
            +QL Y+      L D S +++   +  +   D R  SL       ++   G         
Sbjct: 52   AQLIYDCPLQKTLRDFSSRDIIQELWERGCNDARQTSLEVMQNLRNFLTSGVRQLRAGLG 111

Query: 502  STLDFVLTSIVYYWAFTLWLLICTIWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGW 681
            S L  +   I Y W+  +W   C +W  + EYT+               VK   WIFG  
Sbjct: 112  SLLHTLFQLIAYLWSSLIWASACAVWHLLREYTIEMLSLASLYMCTVYMVKTAAWIFGDL 171

Query: 682  PIYLI-AGLSAILKFIFRNPLSKTPYKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHA 858
            PI+L+ AGLSA    I R    K  YK EK+V+GF +F+I Q PP   VL++ H D SHA
Sbjct: 172  PIFLLKAGLSAA-SGISRVLWFKGNYKAEKSVEGFLSFKIPQTPPGKSVLQVQHQDGSHA 230

Query: 859  GYATCISLFDGTTGLLTAYHLVNEGSQVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPP 1038
            GYATC++LF+G+TGL+TA+H++  G+++VST NG+ IP   F     +  RD +LM GPP
Sbjct: 231  GYATCVALFNGSTGLITAHHVITPGAKIVSTRNGSKIPASEFQIKLENSKRDLILMTGPP 290

Query: 1039 NWTGLLACKSAHFTPATQLAKSNATIFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCG 1218
            NW G LACK++    A  L KS AT F    + W ++NA+I GV+A  N+VSVLSNT+ G
Sbjct: 291  NWEGALACKASQIQTANNLCKSKATFFAWNGEDWESSNAEIVGVSACRNYVSVLSNTNPG 350

Query: 1219 HSGAPYFNGKTVLGVHVGGGKNENCNYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVE 1398
            HSG PYFNGKT+LGVH+GG  +EN NY++ IP + G TSPKYVFETTAP G++F DEE+ 
Sbjct: 351  HSGTPYFNGKTLLGVHIGGANDENANYLAPIPAVPGLTSPKYVFETTAPQGRLFNDEEIT 410

Query: 1399 ALLEDFGLEEIRWMAKNKSERQ 1464
            AL+E+F + E+  + + +  +Q
Sbjct: 411  ALVEEFSMSEVASIMRARKGKQ 432


>gb|AFM68938.1| P1-P2 fusion protein [Melon aphid-borne yellows virus]
          Length = 1056

 Score =  837 bits (2163), Expect(2) = 0.0
 Identities = 412/623 (66%), Positives = 485/623 (77%)
 Frame = +3

Query: 1515 GGRKSGTDHRKNRTGNGYHRAKRQGEDWARRNTSRCCSFYTEGTLGPRCHPSHTHDPDNY 1694
            G R+ G D   NR    +   +R+     +RN + CCSF+TEGTL PR   SH H+P N 
Sbjct: 443  GNRRRGGDRANNRPTLSHPGQRRKQY---KRNINNCCSFFTEGTLAPRTIASHEHEPWND 499

Query: 1695 YAPRCHCTIPGHACFYRKYLGHGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENAQTEAK 1874
              PRC C IPGH CF+R ++G+     G +    +P  +R +GCG+  E+G E ++ EA 
Sbjct: 500  EKPRCFCAIPGHDCFFRNFIGNQERNTGEN----KPPVNREAGCGSLDEEGNEESRKEAT 555

Query: 1875 TWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGRQLIRDH 2054
                +AEDF ++F S Y W  E      APGF+QVG LP+FYHP+QK  + WG ++ R H
Sbjct: 556  K--RQAEDFQRFFDSQYTW--EPGSGKEAPGFKQVGRLPEFYHPKQKTGSKWGAKICRQH 611

Query: 2055 PELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTVEAYQNV 2234
            PE++  T GFGWP+FGA+AEL SLRLQA+RWLERA+ VKIPSSE+RERVI K  EAY+N 
Sbjct: 612  PEMDAYTQGFGWPQFGAQAELKSLRLQAARWLERAQSVKIPSSEERERVIRKCCEAYKNA 671

Query: 2235 KTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDPKLLPVL 2414
            KT GP ATR   L W+ FLEDFKQAVFSLE DAG+GVPYIAYG P HR WVEDPKLLP+L
Sbjct: 672  KTIGPNATRGDSLSWEGFLEDFKQAVFSLEFDAGIGVPYIAYGRPTHRGWVEDPKLLPIL 731

Query: 2415 AQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRLIMSVSL 2594
            A+ TF RLQKMLEV  + +S  ELVQ G+CDPIR+FVKGEPHK +KL EGRYRLIMSVSL
Sbjct: 732  ARLTFNRLQKMLEVRFEHLSPAELVQAGLCDPIRVFVKGEPHKQSKLDEGRYRLIMSVSL 791

Query: 2595 VDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTREIIGNW 2774
            +DQLVARVLFQNQNKREI LWRA+PSKPGFGLSTD+QVVEF+ +LSAQVGV  +E+IGNW
Sbjct: 792  IDQLVARVLFQNQNKREITLWRAVPSKPGFGLSTDEQVVEFMEILSAQVGVAPKELIGNW 851

Query: 2775 PSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSVLCLSDG 2954
              +LI TDCSGFDWSVSDWLL DDMEVRNRLT+D+NE T RLR++WLKCISNSVL LSDG
Sbjct: 852  QHHLIATDCSGFDWSVSDWLLEDDMEVRNRLTLDINETTKRLRSAWLKCISNSVLSLSDG 911

Query: 2955 RLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLSKYSSLG 3134
             LLSQ+VPGVQK           RIRVMAAYHCGA+WA+AMGDDALESV ++L+KY+ LG
Sbjct: 912  TLLSQQVPGVQKSGSYNTSSSNSRIRVMAAYHCGAEWAMAMGDDALESVGSNLAKYAELG 971

Query: 3135 FKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAACFSVFN 3314
            FKVEVS +LEFCSHIF+ E+LAIPVNKAKM+YKLIHGYEP CGN EVL+NYL ACF+V N
Sbjct: 972  FKVEVSSKLEFCSHIFEREDLAIPVNKAKMIYKLIHGYEPECGNAEVLINYLTACFAVLN 1031

Query: 3315 ELRSDPNLVATLYQWLVTPVQPQ 3383
            ELRSDP LV+TL+QWLV PVQPQ
Sbjct: 1032 ELRSDPQLVSTLHQWLVLPVQPQ 1054



 Score =  327 bits (838), Expect(2) = 0.0
 Identities = 166/382 (43%), Positives = 231/382 (60%), Gaps = 1/382 (0%)
 Frame = +1

Query: 322  SQLTYEPHKPTMLPDHSYKELGAAILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAK 501
            +QL Y+     ML D S +++   +  +   D R  SL    +  ++ + GA        
Sbjct: 52   AQLIYDCPPQKMLRDFSSRDIIRELWERGCNDARQTSLEVMQIFENFLLSGARRLRAGLG 111

Query: 502  STLDFVLTSIVYYWAFTLWLLICTIWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGW 681
            S L  +   I Y W+  +W   C +W  + EYT+               VK   WIFG  
Sbjct: 112  SLLHTLFQLIAYLWSSLIWASACAVWHLLREYTIEMLSLASLYMCTVYMVKTAAWIFGDL 171

Query: 682  PIYLI-AGLSAILKFIFRNPLSKTPYKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHA 858
            PI+L+ AGLSA    I R    K  YK EK+V+GF +F+I Q PP   VL++ H D SHA
Sbjct: 172  PIFLLKAGLSAA-SGISRVLWFKGNYKAEKSVEGFLSFKIPQTPPGKSVLQVQHQDGSHA 230

Query: 859  GYATCISLFDGTTGLLTAYHLVNEGSQVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPP 1038
            GYATC++LF+G+TGL+TA+H++  G+++VST NG+ IP   F     +  RD +LM GPP
Sbjct: 231  GYATCVALFNGSTGLITAHHVITPGAKIVSTRNGSKIPASEFQIKLENSKRDLILMTGPP 290

Query: 1039 NWTGLLACKSAHFTPATQLAKSNATIFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCG 1218
            NW G LACK++    A  L KS AT F    + W ++NA+I GV+A  N+VSVLSNT+ G
Sbjct: 291  NWEGALACKASQIQTANNLCKSKATFFAWNGEDWESSNAEIVGVSACRNYVSVLSNTNPG 350

Query: 1219 HSGAPYFNGKTVLGVHVGGGKNENCNYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVE 1398
            HSG PYFNGKT+LGVH+GG  +EN NY++ IP + G TSPKYVFETTAP G++F DEE+ 
Sbjct: 351  HSGTPYFNGKTLLGVHIGGANDENANYLAPIPAVPGLTSPKYVFETTAPQGRLFNDEEIA 410

Query: 1399 ALLEDFGLEEIRWMAKNKSERQ 1464
            AL+E+F + E+  + + +  +Q
Sbjct: 411  ALIEEFSMSEVASIMRARKGKQ 432


>gb|ABV55637.1| P1-P2 fusion protein [Melon aphid-borne yellows virus]
          Length = 1056

 Score =  837 bits (2161), Expect(2) = 0.0
 Identities = 412/623 (66%), Positives = 485/623 (77%)
 Frame = +3

Query: 1515 GGRKSGTDHRKNRTGNGYHRAKRQGEDWARRNTSRCCSFYTEGTLGPRCHPSHTHDPDNY 1694
            G R+ G D   NR    +   +R+     +RN + CCSF+TEGTL PR   SH H+P N 
Sbjct: 443  GKRRRGGDRANNRPTLSHPGQRRKQY---KRNINNCCSFFTEGTLAPRTIASHEHEPWND 499

Query: 1695 YAPRCHCTIPGHACFYRKYLGHGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENAQTEAK 1874
              PRC C IPGH CF+R ++G+     G +    +P  +R +GCG+  E+G E ++ EA 
Sbjct: 500  EKPRCFCAIPGHDCFFRNFIGNQERNTGEN----KPPVNREAGCGSLDEEGHEESRKEAT 555

Query: 1875 TWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGRQLIRDH 2054
                +AEDF ++F S Y W  E      APGF+QVG LP+FYHP+QK  + WG ++ R H
Sbjct: 556  K--RQAEDFQRFFDSQYTW--EPGSGKEAPGFKQVGRLPEFYHPKQKTGSKWGAKICRQH 611

Query: 2055 PELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTVEAYQNV 2234
            PE++  T GFGWP+FGA+AEL SLRLQA+RWLERA+ VKIPSSE+RERVI K  EAY+N 
Sbjct: 612  PEMDAYTQGFGWPQFGAQAELKSLRLQAARWLERAQSVKIPSSEERERVIRKCCEAYRNA 671

Query: 2235 KTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDPKLLPVL 2414
            KT GP ATR   L W+ FLEDFKQAVFSLE DAG+GVPYIAYG P HR WVEDPKLLP+L
Sbjct: 672  KTIGPNATRGDSLSWEGFLEDFKQAVFSLEFDAGIGVPYIAYGRPTHRGWVEDPKLLPIL 731

Query: 2415 AQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRLIMSVSL 2594
            A+ TF RLQKMLEV  + +S  ELVQ G+CDPIR+FVKGEPHK +KL EGRYRLIMSVSL
Sbjct: 732  ARLTFNRLQKMLEVRFEHLSPAELVQAGLCDPIRVFVKGEPHKQSKLDEGRYRLIMSVSL 791

Query: 2595 VDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTREIIGNW 2774
            +DQLVARVLFQNQNKREI LWRA+PSKPGFGLSTD+QVVEF+ +LSAQVGV  +E+IGNW
Sbjct: 792  IDQLVARVLFQNQNKREITLWRAVPSKPGFGLSTDEQVVEFMEILSAQVGVAPKELIGNW 851

Query: 2775 PSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSVLCLSDG 2954
              +LI TDCSGFDWSVSDWLL DDMEVRNRLT+D+NE T RLR++WLKCISNSVL LSDG
Sbjct: 852  QHHLIATDCSGFDWSVSDWLLEDDMEVRNRLTLDINETTKRLRSAWLKCISNSVLSLSDG 911

Query: 2955 RLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLSKYSSLG 3134
             LLSQ+VPGVQK           RIRVMAAYHCGA+WA+AMGDDALESV ++L+KY+ LG
Sbjct: 912  TLLSQQVPGVQKSGSYNTSSSNSRIRVMAAYHCGAEWAMAMGDDALESVGSNLAKYAELG 971

Query: 3135 FKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAACFSVFN 3314
            FKVEVS +LEFCSHIF+ E+LAIPVNKAKM+YKLIHGYEP CGN EVL+NYL ACF+V N
Sbjct: 972  FKVEVSSKLEFCSHIFEREDLAIPVNKAKMIYKLIHGYEPECGNAEVLINYLTACFAVLN 1031

Query: 3315 ELRSDPNLVATLYQWLVTPVQPQ 3383
            ELRSDP LV+TL+QWLV PVQPQ
Sbjct: 1032 ELRSDPQLVSTLHQWLVLPVQPQ 1054



 Score =  319 bits (817), Expect(2) = 0.0
 Identities = 164/382 (42%), Positives = 227/382 (59%), Gaps = 1/382 (0%)
 Frame = +1

Query: 322  SQLTYEPHKPTMLPDHSYKELGAAILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAK 501
            +QL Y+      L D S +++   +  +   D R  SL       ++   G         
Sbjct: 52   AQLIYDCPLQKTLRDFSSRDIIQELWERGCNDARQTSLEVMQNLRNFLTSGVRQLRAGLG 111

Query: 502  STLDFVLTSIVYYWAFTLWLLICTIWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGW 681
            S L  +   I Y W+  +W   C +W  + EYT+               VK   WIFG  
Sbjct: 112  SLLHTLFQLIAYLWSSLIWASACAVWHLLREYTIEMLSLASLYMCTVYMVKTAAWIFGDL 171

Query: 682  PIYLI-AGLSAILKFIFRNPLSKTPYKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHA 858
            PI+L+ AGLSA    I R    K  YK EK+V+GF +F+I Q PP   VL++ H D SHA
Sbjct: 172  PIFLLKAGLSAA-SGISRVLWFKGNYKAEKSVEGFLSFKIPQTPPGKSVLQVQHQDGSHA 230

Query: 859  GYATCISLFDGTTGLLTAYHLVNEGSQVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPP 1038
            GYATC++LF+G+TGL+TA+H++  G+++VST NG+ IP   F     +  RD +LM GPP
Sbjct: 231  GYATCVALFNGSTGLITAHHVITPGAKIVSTRNGSKIPASEFQIKLENSKRDLILMTGPP 290

Query: 1039 NWTGLLACKSAHFTPATQLAKSNATIFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCG 1218
            NW G LACK++    A  L KS AT F    + W ++NA+I GV+A  N+VSVLSNT+ G
Sbjct: 291  NWEGALACKASQIQTANNLCKSKATFFAWNGEDWESSNAEIVGVSACRNYVSVLSNTNPG 350

Query: 1219 HSGAPYFNGKTVLGVHVGGGKNENCNYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVE 1398
            HSG PYFNGKT+LGVH+GG  +EN NY++ IP + G TSPKYVFETTAP G++F DEE+ 
Sbjct: 351  HSGTPYFNGKTLLGVHIGGANDENANYLAPIPAVPGLTSPKYVFETTAPQGRLFNDEEIT 410

Query: 1399 ALLEDFGLEEIRWMAKNKSERQ 1464
            AL+E+F + E+  + + +  +Q
Sbjct: 411  ALVEEFSMSEVASIMRARKGKQ 432


>gb|ACF48393.1| P1 protein-P2 fusion protein [Beet western yellows virus]
          Length = 1060

 Score =  834 bits (2154), Expect(2) = 0.0
 Identities = 410/625 (65%), Positives = 479/625 (76%)
 Frame = +3

Query: 1512 AGGRKSGTDHRKNRTGNGYHRAKRQGEDWARRNTSRCCSFYTEGTLGPRCHPSHTHDPDN 1691
            +G R+ G   R NR     H   R+ + W R++   CCS+YTEGTLGPRC   H H PD+
Sbjct: 442  SGKREGGRARRNNRNPQRKHPHSRR-KQW-RKSPPSCCSYYTEGTLGPRCQAGHIHAPDD 499

Query: 1692 YYAPRCHCTIPGHACFYRKYLGHGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENAQTEA 1871
               P C C IPGH CF+R+Y              +  E  RG       E+ PE+    A
Sbjct: 500  EGRPGCWCEIPGHDCFFRRYQRDQRSHSAEDRCSFDREAGRGDPGREGHEETPES---RA 556

Query: 1872 KTWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGRQLIRD 2051
            K    +AE+F +YF+S Y+W  E      APGF+Q G LP+FYHP+QKGE+ WG ++++ 
Sbjct: 557  KKICEQAENFCQYFSSLYRW--ESGSGKEAPGFEQTGSLPQFYHPKQKGESRWGAEVLQL 614

Query: 2052 HPELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTVEAYQN 2231
            HPELE  T GFGWP+FGA+AEL SLRLQA+RWLERA+ VKIPSSE+RERVI K  EAY+N
Sbjct: 615  HPELEAHTRGFGWPQFGAQAELKSLRLQAARWLERAQQVKIPSSEERERVIRKCCEAYKN 674

Query: 2232 VKTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDPKLLPV 2411
            VK+NGP ATR  +L W NFLEDFKQAVFSLE DAG+GVPY+AYG P HR WVE+ +LLP+
Sbjct: 675  VKSNGPNATRGNKLSWGNFLEDFKQAVFSLEFDAGIGVPYVAYGKPTHRGWVENHELLPI 734

Query: 2412 LAQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRLIMSVS 2591
            LA+ TFIRLQKMLEV  + ++ E+LVQ+G+CDPIR+FVKGEPHK +KL EGRYRLIMSVS
Sbjct: 735  LARLTFIRLQKMLEVRFEDLTPEQLVQQGLCDPIRVFVKGEPHKQSKLDEGRYRLIMSVS 794

Query: 2592 LVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTREIIGN 2771
            LVDQLVARVLFQNQNKREI LWRA+PSKPGFGLSTD+QV EFV LLSAQV V   ++I N
Sbjct: 795  LVDQLVARVLFQNQNKREITLWRAVPSKPGFGLSTDEQVAEFVQLLSAQVQVSPPQLINN 854

Query: 2772 WPSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSVLCLSD 2951
            W  +L+ TDCSGFDWSVSDWLL DDMEVRNRLT DLNE T +LRA+WLKCISNSVLCLSD
Sbjct: 855  WRQHLVATDCSGFDWSVSDWLLEDDMEVRNRLTTDLNETTSKLRAAWLKCISNSVLCLSD 914

Query: 2952 GRLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLSKYSSL 3131
            G LL+QRVPGVQK           RIRVMAA+HCGA+WA+AMGDDALESV TDL KY++L
Sbjct: 915  GTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAFHCGAEWAMAMGDDALESVSTDLGKYAAL 974

Query: 3132 GFKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAACFSVF 3311
            GFKVE S +LEFCSHIF+ E+LAIPVNKAKM+YKLIHGYEP CGN EVLVNYL ACF++ 
Sbjct: 975  GFKVEESSKLEFCSHIFEREDLAIPVNKAKMIYKLIHGYEPECGNAEVLVNYLTACFAIL 1034

Query: 3312 NELRSDPNLVATLYQWLVTPVQPQN 3386
            NELRSDP +V TLY WLV PVQPQN
Sbjct: 1035 NELRSDPQMVQTLYTWLVEPVQPQN 1059



 Score =  325 bits (832), Expect(2) = 0.0
 Identities = 176/407 (43%), Positives = 233/407 (57%), Gaps = 1/407 (0%)
 Frame = +1

Query: 214  ANNWGITSYIPPVGVNVAGYGDFSPFLGRNLTLQLTSQLTYEPHKPTMLPDHSYKELGAA 393
            A+++  TS + P   N   +  +   +  + T Q+  QLTY+      L D+S  ++   
Sbjct: 18   ASSYAGTSVMSPGIANATDWPGYIEPVMPHCTPQV--QLTYDCPPSKTLQDYSSHDMLQE 75

Query: 394  ILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAKSTLDFVLTSIVYYWAFTLWLLICT 573
            +  +   + R+    A+     ++  G       +   L   L  I Y W+  +W  +C 
Sbjct: 76   VWGRGLTNTRTFWQEAKRNFIDFYQSGVQVLSATSHKLLKQTLRGISYVWSSLIWASLCA 135

Query: 574  IWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGWPIYLI-AGLSAILKFIFRNPLSKT 750
            +W  + EYT+               VKAV W FG  PI+L   GLS  L+ I R    + 
Sbjct: 136  LWYLVREYTVETLILGWLYILTVCMVKAVAWTFGASPIFLFNIGLST-LRGISRILWFRR 194

Query: 751  PYKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHAGYATCISLFDGTTGLLTAYHLVNE 930
            PYK EK+V+GF +F+I Q PP++ VL++ H D SHAGYA C+ L++GTTGLLTA H+V+ 
Sbjct: 195  PYKCEKSVEGFLSFKIPQSPPKHSVLQVQHPDGSHAGYAKCVMLYNGTTGLLTARHVVSS 254

Query: 931  GSQVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPPNWTGLLACKSAHFTPATQLAKSNA 1110
            G +V ST NGN IPL  F     S  RD +LM GPPNW G LACK+ HF  A  L K  A
Sbjct: 255  GCKVTSTRNGNKIPLSEFKVETESSTRDLLLMAGPPNWEGTLACKAVHFQTAPYLCKCKA 314

Query: 1111 TIFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCGHSGAPYFNGKTVLGVHVGGGKNEN 1290
            T F      W ++NA+I G +   NFVSVLS TD GHSG PYFNGKT+LGVHVGG K EN
Sbjct: 315  TFFAFNEGAWESSNAEIAGASPCRNFVSVLSITDPGHSGTPYFNGKTLLGVHVGGAKEEN 374

Query: 1291 CNYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVEALLEDFGLEEI 1431
             NYM+ IPP  G T+P YVFETTAP G++FT+EE+  L EDF   EI
Sbjct: 375  ANYMAPIPPRAGLTTPNYVFETTAPQGRIFTEEEILELAEDFSYSEI 421


>gb|ACF48399.1| P1 protein-P2 fusion protein [Beet western yellows virus]
          Length = 1060

 Score =  832 bits (2150), Expect(2) = 0.0
 Identities = 407/625 (65%), Positives = 479/625 (76%)
 Frame = +3

Query: 1512 AGGRKSGTDHRKNRTGNGYHRAKRQGEDWARRNTSRCCSFYTEGTLGPRCHPSHTHDPDN 1691
            +G R+ G   R NR     H   R+ + W R++   CCS+YTEGTLGPRC   H H PD+
Sbjct: 442  SGKREGGRARRNNRNPQRKHPHSRR-KQW-RKSPPSCCSYYTEGTLGPRCQAGHIHAPDD 499

Query: 1692 YYAPRCHCTIPGHACFYRKYLGHGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENAQTEA 1871
               P C C IPGH CF+R+Y              +  E  RG       E   E +++ A
Sbjct: 500  EGRPGCWCEIPGHDCFFRRYQRDQRSHSAEDRCSFDREAGRGD---PGREGHEETSESRA 556

Query: 1872 KTWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGRQLIRD 2051
            K    +AE+F +YF+S Y+W  E      APGF+Q G LP+FYHP+QKGE+ WG ++++ 
Sbjct: 557  KKICEQAENFCQYFSSLYRW--ESGSGKEAPGFEQTGSLPQFYHPKQKGESRWGAKVLQL 614

Query: 2052 HPELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTVEAYQN 2231
            HPELE  T GFGWP+FGA+AEL SLRLQA+RWLERA+ VKIPSSE+RERVI K  EAY+N
Sbjct: 615  HPELEAHTRGFGWPQFGAQAELKSLRLQAARWLERAQQVKIPSSEERERVIRKCCEAYKN 674

Query: 2232 VKTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDPKLLPV 2411
            VK+NGP ATR  +L W NFLEDFKQAVFSLE DAG+GVPY+AYG P HR WVE+ +LLP+
Sbjct: 675  VKSNGPNATRGNKLSWGNFLEDFKQAVFSLEFDAGIGVPYVAYGKPTHRGWVENHELLPI 734

Query: 2412 LAQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRLIMSVS 2591
            LA+ TFIRLQKMLEV  + ++ E+LVQ+G+CDPIR+FVKGEPHK +KL EGRYRLIMSVS
Sbjct: 735  LARLTFIRLQKMLEVRFEDLTPEQLVQQGLCDPIRVFVKGEPHKQSKLDEGRYRLIMSVS 794

Query: 2592 LVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTREIIGN 2771
            LVDQLVARVLFQNQNKREI LWRA+PSKPGFGLSTD+QV EF+ LLSAQV V   ++I N
Sbjct: 795  LVDQLVARVLFQNQNKREITLWRAVPSKPGFGLSTDEQVAEFIQLLSAQVQVSPPQLINN 854

Query: 2772 WPSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSVLCLSD 2951
            W  +L+ TDCSGFDWSVSDWLL DDMEVRNRLT DLNE T +LRA+WLKCISNS+LCLSD
Sbjct: 855  WRQHLVATDCSGFDWSVSDWLLEDDMEVRNRLTTDLNETTSKLRAAWLKCISNSILCLSD 914

Query: 2952 GRLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLSKYSSL 3131
            G LL+QRVPGVQK           RIRVMAA+HCGA+WA+AMGDDALESV TDL KY++L
Sbjct: 915  GTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAFHCGAEWAMAMGDDALESVSTDLGKYAAL 974

Query: 3132 GFKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAACFSVF 3311
            GFKVE S +LEFCSHIF+ E+LAIPVNKAKM+YKLIHGYEP CGN EVLVNYL ACF++ 
Sbjct: 975  GFKVEESSKLEFCSHIFEREDLAIPVNKAKMIYKLIHGYEPECGNAEVLVNYLTACFAIL 1034

Query: 3312 NELRSDPNLVATLYQWLVTPVQPQN 3386
            NELRSDP +V TLY WLV PVQPQN
Sbjct: 1035 NELRSDPQMVQTLYTWLVEPVQPQN 1059



 Score =  331 bits (848), Expect(2) = 0.0
 Identities = 171/370 (46%), Positives = 220/370 (59%), Gaps = 1/370 (0%)
 Frame = +1

Query: 325  QLTYEPHKPTMLPDHSYKELGAAILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAKS 504
            QLTY+      L D+S  ++   +  +   + R+    A+   T ++  G       +  
Sbjct: 53   QLTYDCPPSKTLQDYSSHDMLLEVWERGLINTRTFWQEAKKNLTDFYQSGVQVLSATSHK 112

Query: 505  TLDFVLTSIVYYWAFTLWLLICTIWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGWP 684
             L   L  I Y W+  +W  +C +W  + EYT+               V+AV W FG  P
Sbjct: 113  FLKQTLRGISYVWSSLIWASLCALWYLVREYTVETLILGWLYILTVCMVRAVAWTFGASP 172

Query: 685  IYLI-AGLSAILKFIFRNPLSKTPYKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHAG 861
            I+L   GLS  L+ I R P  + PYK EK+V+GF +F+I Q PP++ VL++ H D SHAG
Sbjct: 173  IFLFNVGLST-LRGISRIPWFRRPYKCEKSVEGFLSFKIPQSPPKHSVLQVQHPDGSHAG 231

Query: 862  YATCISLFDGTTGLLTAYHLVNEGSQVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPPN 1041
            YATC+ L++GTTGLLTA H+V+ G +V ST NGN IPL  F     S  RD +LM GPPN
Sbjct: 232  YATCVMLYNGTTGLLTARHVVSSGCKVTSTRNGNKIPLSEFKVETESSTRDLLLMAGPPN 291

Query: 1042 WTGLLACKSAHFTPATQLAKSNATIFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCGH 1221
            W G LACK+ HF  A  L K  AT F      W ++NA+I G +   NFVSVLS TD GH
Sbjct: 292  WEGTLACKAVHFQTAPYLCKCKATFFAFNEGAWESSNAEITGASPCRNFVSVLSITDPGH 351

Query: 1222 SGAPYFNGKTVLGVHVGGGKNENCNYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVEA 1401
            SG PYFNGKT+LGVHVGG K EN NYM+ IPP  G T+P YVFETTAP G++FT+EE+  
Sbjct: 352  SGTPYFNGKTLLGVHVGGAKEENANYMAPIPPRAGLTTPNYVFETTAPQGRIFTEEEILE 411

Query: 1402 LLEDFGLEEI 1431
            L EDF   EI
Sbjct: 412  LAEDFSYSEI 421


>gb|ADR74371.1| P1-P2 fusion protein [Beet western yellows virus]
          Length = 1060

 Score =  826 bits (2134), Expect(2) = 0.0
 Identities = 409/626 (65%), Positives = 480/626 (76%), Gaps = 1/626 (0%)
 Frame = +3

Query: 1509 NAGGRKSGTDHRKNRTGNGYHRAKRQGEDWARRNTSRCCSFYTEGTLGPRCHPSHTHDPD 1688
            ++G R+SG+  R NR     H   R G+ W RRN   CCS +TEGTLG RC  SH H P 
Sbjct: 441  SSGKRESGSVRRNNRNPQRKHPQGR-GKQW-RRNPPSCCSHFTEGTLGSRCQASHIHAPH 498

Query: 1689 NYYAPRCHCTIPGHACFYRKYLGHGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENA-QT 1865
            +   P C C IP H CF+R++          H    +    R +GCG    +G E   ++
Sbjct: 499  DEGRPGCWCEIPNHDCFFRRF----QRDQRSHPTEDRCSFDREAGCGDPCREGNEETPES 554

Query: 1866 EAKTWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGRQLI 2045
             A+    +AE+F +YF+S Y+W  E      APGF+Q+G LP+FYHP+QKGE+ WG +++
Sbjct: 555  RAEKIREQAENFCQYFSSLYRW--ESGSGKEAPGFEQIGSLPQFYHPKQKGESRWGAKVL 612

Query: 2046 RDHPELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTVEAY 2225
            + HPEL  QT GFGWP+FGA+AEL SLRLQA+RWLERA+ VKIPS+E+RERVI K  EAY
Sbjct: 613  QLHPELAVQTRGFGWPQFGAQAELKSLRLQAARWLERAQQVKIPSTEERERVIRKRCEAY 672

Query: 2226 QNVKTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDPKLL 2405
            QN K+NGP ATR  +L W+NFLEDFKQAVFSLE DAG+GVPYIAYG P HR WVED KLL
Sbjct: 673  QNAKSNGPNATRGNKLSWENFLEDFKQAVFSLEFDAGIGVPYIAYGKPTHRGWVEDQKLL 732

Query: 2406 PVLAQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRLIMS 2585
            PVLA  TFIRLQKMLE   + +S E+LVQ G+CDPIR+FVKGEPHK +KL EGRYRLIMS
Sbjct: 733  PVLAHLTFIRLQKMLEARFEELSPEQLVQEGLCDPIRVFVKGEPHKQSKLDEGRYRLIMS 792

Query: 2586 VSLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTREII 2765
            VSLVDQLVARVLFQNQNKREIALWRA+PSKPGFGLSTD+QVVEFV +LSAQV V   ++I
Sbjct: 793  VSLVDQLVARVLFQNQNKREIALWRAVPSKPGFGLSTDEQVVEFVQMLSAQVKVSPPQLI 852

Query: 2766 GNWPSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSVLCL 2945
             +W  +L+ TDCSGFDWSVSDWLL DDMEVRNRLT DLNE T +LRA+WLKCISNSVLCL
Sbjct: 853  DDWRQHLVATDCSGFDWSVSDWLLEDDMEVRNRLTTDLNETTSKLRAAWLKCISNSVLCL 912

Query: 2946 SDGRLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLSKYS 3125
            SDG LL+QRVPGVQK           RIRVMAA+HCGA+WA+AMGDDALESV TDL KY+
Sbjct: 913  SDGTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAFHCGAEWAMAMGDDALESVSTDLGKYA 972

Query: 3126 SLGFKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAACFS 3305
            +LGFKVE S +LEFCSHIF+ E+LA+PVNKAKM+YKLIHGYEP C + EVLVNYL ACF+
Sbjct: 973  ALGFKVEESSKLEFCSHIFEREDLAVPVNKAKMIYKLIHGYEPECCDPEVLVNYLTACFA 1032

Query: 3306 VFNELRSDPNLVATLYQWLVTPVQPQ 3383
            + NELRSDP +V TLY WLV PVQPQ
Sbjct: 1033 ILNELRSDPQMVQTLYSWLVEPVQPQ 1058



 Score =  338 bits (866), Expect(2) = 0.0
 Identities = 167/372 (44%), Positives = 224/372 (60%)
 Frame = +1

Query: 325  QLTYEPHKPTMLPDHSYKELGAAILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAKS 504
            QLTY+   P  L D+S +E+   +  + + + ++  L A+    ++   G       +  
Sbjct: 53   QLTYDCPPPKTLQDYSSREMLQEVWGRGFTNTKTSLLKAKTSLLNFCRSGVQMLSATSHK 112

Query: 505  TLDFVLTSIVYYWAFTLWLLICTIWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGWP 684
             L + L  + Y W+  +W  +C +W  I EYT+               VK   WIFG  P
Sbjct: 113  LLKYALRGMTYVWSSLIWASLCALWFLIREYTVEVLMLGSLYVLTVFMVKTAAWIFGDSP 172

Query: 685  IYLIAGLSAILKFIFRNPLSKTPYKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHAGY 864
            I+L      IL+ I R    +  YK EK+V+GF +F+I Q PP+N +L++ H D SHAGY
Sbjct: 173  IFLFNVGLTILRSISRVLWCRRSYKCEKSVEGFLSFKIPQTPPKNSILQVQHPDGSHAGY 232

Query: 865  ATCISLFDGTTGLLTAYHLVNEGSQVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPPNW 1044
            ATC+ L++GTTGLLTA H+V+ G +VVST NGN IPL  F     S  RD +LM GPPNW
Sbjct: 233  ATCVMLYNGTTGLLTAQHVVSSGCKVVSTRNGNKIPLSEFKVEIESPTRDLMLMTGPPNW 292

Query: 1045 TGLLACKSAHFTPATQLAKSNATIFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCGHS 1224
             G LACK+ HF  A+ L KS A+ F    + W ++NA+I G +    FVSVLSNTD GHS
Sbjct: 293  EGTLACKAVHFQTASNLCKSKASFFTFNGEAWESSNAEITGTSPCRKFVSVLSNTDPGHS 352

Query: 1225 GAPYFNGKTVLGVHVGGGKNENCNYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVEAL 1404
            G PYFNGKT+LGVH+GG K EN NY++ +PP  G T P YVFETTAP G++FT+EE+  L
Sbjct: 353  GTPYFNGKTLLGVHIGGAKEENANYLAPVPPRAGLTIPNYVFETTAPQGRIFTEEEILEL 412

Query: 1405 LEDFGLEEIRWM 1440
             ED+   EIR M
Sbjct: 413  AEDYSYSEIRSM 424


>gb|AEI55845.1| P1-P2 fusion protein [Cucurbit aphid-borne yellows virus]
          Length = 1056

 Score =  823 bits (2125), Expect(2) = 0.0
 Identities = 409/623 (65%), Positives = 481/623 (77%)
 Frame = +3

Query: 1515 GGRKSGTDHRKNRTGNGYHRAKRQGEDWARRNTSRCCSFYTEGTLGPRCHPSHTHDPDNY 1694
            G RK G     NR    +   +R+     +R+ + CCSF+TEGTL PR   SH H+P N 
Sbjct: 443  GKRKRGGVRANNRPLLSHPGQRRKQY---KRSINNCCSFFTEGTLAPRTIASHVHEPWND 499

Query: 1695 YAPRCHCTIPGHACFYRKYLGHGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENAQTEAK 1874
              PRC C IPGH CF+R ++G+     G +  P     +R +GCG+  E+G E ++ EA 
Sbjct: 500  EKPRCFCEIPGHDCFFRNFVGNQKCYTGENESPV----NREAGCGSLSEEGHEESRKEAT 555

Query: 1875 TWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGRQLIRDH 2054
                +AEDF ++F S Y W  E      APGF+QVG LP+FY P+QK  + WG ++ R H
Sbjct: 556  E--RQAEDFQRFFDSQYTW--EPGSGKEAPGFKQVGSLPEFYRPKQKTGSKWGAKICRQH 611

Query: 2055 PELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTVEAYQNV 2234
            PE+   T GFGWP+FGA+AEL SLRLQA+RWLERA+ VKIPSSE+RERVI K  EAY+N 
Sbjct: 612  PEMGSYTQGFGWPQFGAQAELKSLRLQAARWLERAQSVKIPSSEERERVIRKCCEAYKNA 671

Query: 2235 KTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDPKLLPVL 2414
            KT GP ATR   L W  FLEDFKQAVFSLE DAG+GVPYIAYG P HR WVEDPKLLP+L
Sbjct: 672  KTIGPNATRGDSLSWDGFLEDFKQAVFSLEFDAGIGVPYIAYGRPTHRGWVEDPKLLPIL 731

Query: 2415 AQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRLIMSVSL 2594
            A+ TF RLQKMLEV  + +S  ELVQ G+CDPIR+FVKGEPHK +KL EGRYRLIMSVSL
Sbjct: 732  ARLTFNRLQKMLEVRFEHLSPAELVQAGLCDPIRVFVKGEPHKQSKLDEGRYRLIMSVSL 791

Query: 2595 VDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTREIIGNW 2774
            +DQLVARVLFQNQNKREI LWRA+PSKPGFGLSTD+QVVEF+ +LSAQVG+  +E+I +W
Sbjct: 792  IDQLVARVLFQNQNKREITLWRAVPSKPGFGLSTDEQVVEFMKILSAQVGIAPKELINDW 851

Query: 2775 PSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSVLCLSDG 2954
             S+LI TDCSGFDWSVSDWLL DDMEVRNRLT+D+NE T RLR++WLKCISNSVL LSDG
Sbjct: 852  QSHLIATDCSGFDWSVSDWLLKDDMEVRNRLTLDINETTKRLRSAWLKCISNSVLSLSDG 911

Query: 2955 RLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLSKYSSLG 3134
             LLSQ VPGVQK           RIRVMAA+HCGA+WA+AMGDDALESV ++L+KY+ LG
Sbjct: 912  TLLSQEVPGVQKSGSYNTSSSNSRIRVMAAFHCGAEWAMAMGDDALESVSSNLAKYAELG 971

Query: 3135 FKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAACFSVFN 3314
            FKVEVSP+LEFCSHIF+ E+LAIPVNKAKMLYKLIHGYEP CGN+EVL+NYLAACFS+ N
Sbjct: 972  FKVEVSPKLEFCSHIFEREDLAIPVNKAKMLYKLIHGYEPECGNVEVLINYLAACFSILN 1031

Query: 3315 ELRSDPNLVATLYQWLVTPVQPQ 3383
            ELRSDP+LV TL+QWLV PVQ Q
Sbjct: 1032 ELRSDPSLVETLHQWLVLPVQSQ 1054



 Score =  329 bits (843), Expect(2) = 0.0
 Identities = 162/381 (42%), Positives = 232/381 (60%)
 Frame = +1

Query: 325  QLTYEPHKPTMLPDHSYKELGAAILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAKS 504
            QL Y+     ML D S +++   I  + Y + R   L       +  + G   +    +S
Sbjct: 53   QLIYDCPPEKMLRDFSSRDIIQEIWERGYNETRLAFLEVMQNLQNLLMSGVRRSRAGLES 112

Query: 505  TLDFVLTSIVYYWAFTLWLLICTIWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGWP 684
             L      + Y W+  +W  +C IW  + EYT+               VK VVWIFGG P
Sbjct: 113  LLHVTFQLVTYLWSSLIWASVCAIWYLLREYTIEMLLLASLYIYTVYMVKMVVWIFGGLP 172

Query: 685  IYLIAGLSAILKFIFRNPLSKTPYKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHAGY 864
            I+L+    ++++ I +    K  YK EK+V+GF +F+I Q PP   VL++ H D SHAGY
Sbjct: 173  IFLLKTGLSMMRGISKVLWFKGNYKAEKSVEGFLSFKIPQTPPGKSVLQVQHQDGSHAGY 232

Query: 865  ATCISLFDGTTGLLTAYHLVNEGSQVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPPNW 1044
            ATC++L++G+TGL+TA+H++  G+++VST NG+ IP   F T   +  RD +LM GPPNW
Sbjct: 233  ATCVALYNGSTGLVTAHHVITPGAKIVSTRNGSKIPASEFRTKLENPKRDLILMTGPPNW 292

Query: 1045 TGLLACKSAHFTPATQLAKSNATIFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCGHS 1224
             G LACK++    A  L KS AT F    + W ++NA+I GV+A  N+VSVLSNTD GHS
Sbjct: 293  EGALACKASQMQTANNLCKSKATFFAWNGEDWESSNAEIVGVSACRNYVSVLSNTDPGHS 352

Query: 1225 GAPYFNGKTVLGVHVGGGKNENCNYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVEAL 1404
            G PYFNGKT+LGVH+GG   EN NY++ IP + G TSPKYVFE++AP G++F DEE+ AL
Sbjct: 353  GTPYFNGKTLLGVHIGGANEENANYLAPIPAVPGLTSPKYVFESSAPQGRLFNDEEIAAL 412

Query: 1405 LEDFGLEEIRWMAKNKSERQR 1467
            +E+F + E+  + + +  +QR
Sbjct: 413  IEEFSMSEVASIVRARKGKQR 433


>gb|ADR74377.1| P1-P2 fusion protein [Beet western yellows virus]
          Length = 1044

 Score =  802 bits (2072), Expect(2) = 0.0
 Identities = 403/625 (64%), Positives = 468/625 (74%)
 Frame = +3

Query: 1509 NAGGRKSGTDHRKNRTGNGYHRAKRQGEDWARRNTSRCCSFYTEGTLGPRCHPSHTHDPD 1688
            ++G R  G+D R NR     H   R G+ W RRN   CCS+Y E                
Sbjct: 441  SSGKRGGGSDRRNNRNPQRKHPQGR-GKQW-RRNPPSCCSYYHE---------------- 482

Query: 1689 NYYAPRCHCTIPGHACFYRKYLGHGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENAQTE 1868
            N+    C C IP H CF+R+Y                 E  RG  C    E+ PE+    
Sbjct: 483  NHSESGCFCQIPDHDCFFRRYQRDQRSHFAEDRCAIDREAGRGDPCREGDEETPES---R 539

Query: 1869 AKTWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGRQLIR 2048
            AK    +AE+F +YF+S Y+W  E      APGF+QVG LP+FYHP+QKGE++WG ++++
Sbjct: 540  AKKIREQAENFCRYFSSLYRW--ESGSGKEAPGFEQVGSLPQFYHPKQKGESHWGAKVLQ 597

Query: 2049 DHPELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTVEAYQ 2228
             HPELE QT GFGWP+FGA+AEL SLRLQA+RWLERA+ VKIPS+E+RERVI K  EAYQ
Sbjct: 598  LHPELEAQTRGFGWPQFGAQAELKSLRLQAARWLERAQQVKIPSTEERERVIRKCCEAYQ 657

Query: 2229 NVKTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDPKLLP 2408
            N K+NGP ATR  +L W NFLEDFKQAVFSLE DAG+GVPYIAYG P HR WVED +LLP
Sbjct: 658  NAKSNGPNATRGNKLSWDNFLEDFKQAVFSLEFDAGIGVPYIAYGKPTHRGWVEDQELLP 717

Query: 2409 VLAQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRLIMSV 2588
            +LA+ TFIRLQKMLE   + +S E+LVQ G+CDPIR+FVKGEPHK +KL EGRYRLIMSV
Sbjct: 718  ILARLTFIRLQKMLEARFEELSPEQLVQEGLCDPIRVFVKGEPHKQSKLDEGRYRLIMSV 777

Query: 2589 SLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTREIIG 2768
            SLVDQLVARVLFQNQNKREIALWRA+PSKPGFGLSTD+QVVEFV +LSAQV V   ++I 
Sbjct: 778  SLVDQLVARVLFQNQNKREIALWRAVPSKPGFGLSTDEQVVEFVQMLSAQVKVSPPQLIN 837

Query: 2769 NWPSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSVLCLS 2948
            NW  +L+ TDCSGFDWSVSDWLL DDMEVRNRLT DLNE T +LRA+WLKCISNSVL LS
Sbjct: 838  NWRQHLVATDCSGFDWSVSDWLLEDDMEVRNRLTTDLNETTRKLRAAWLKCISNSVLSLS 897

Query: 2949 DGRLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLSKYSS 3128
            DG LL+QRVPGVQK           RIRVMAA+HCGA+WA+AMGDDALESV TDL KY++
Sbjct: 898  DGTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAFHCGAEWAMAMGDDALESVSTDLGKYAA 957

Query: 3129 LGFKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAACFSV 3308
            LGFKVE S +LEFCSHIF+ E+LA+PVNKAKM+YKLIHGYEP CGN EVLVNYL ACF++
Sbjct: 958  LGFKVEESSKLEFCSHIFEREDLAVPVNKAKMIYKLIHGYEPECGNPEVLVNYLTACFAI 1017

Query: 3309 FNELRSDPNLVATLYQWLVTPVQPQ 3383
             NELRSDP +V TLY WLV PVQPQ
Sbjct: 1018 LNELRSDPQMVQTLYSWLVEPVQPQ 1042



 Score =  330 bits (847), Expect(2) = 0.0
 Identities = 168/370 (45%), Positives = 221/370 (59%)
 Frame = +1

Query: 325  QLTYEPHKPTMLPDHSYKELGAAILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAKS 504
            QL Y+      L D+S  E+   I  + Y + ++    A+    S+   G       +  
Sbjct: 53   QLAYDCPPFKTLQDYSSHEMLQEIWGRGYINTKTSLQKAKMNLESFSRSGVQMLSAASHK 112

Query: 505  TLDFVLTSIVYYWAFTLWLLICTIWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGWP 684
             L   L  I Y W+ ++W  +C +W  + EYT+               VK   WIFG  P
Sbjct: 113  LLKHALRGIAYVWSSSIWASLCALWFLVREYTVEVLTLGSLYALTAFMVKTAAWIFGASP 172

Query: 685  IYLIAGLSAILKFIFRNPLSKTPYKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHAGY 864
            I+L      ILK I R    K PYK EK+V+GF +F+I Q PP++ VL++ H D SHAGY
Sbjct: 173  IFLFNIGLTILKSISRVLWCKGPYKCEKSVEGFLSFKIPQSPPKHSVLQVQHPDGSHAGY 232

Query: 865  ATCISLFDGTTGLLTAYHLVNEGSQVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPPNW 1044
            ATC+ L++G TGLLTA H+V+ G +VVST NGN IPL  F     S ARD +LM GPPNW
Sbjct: 233  ATCVMLYNGATGLLTAQHVVSPGCKVVSTRNGNKIPLSEFKVEIESTARDLMLMTGPPNW 292

Query: 1045 TGLLACKSAHFTPATQLAKSNATIFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCGHS 1224
             G LACK+ HF  A+ L KS A+ F      W ++NA++ G++    FVSVLSNTD GHS
Sbjct: 293  EGTLACKAVHFQTASNLCKSKASFFTFNGKTWESSNAEVTGISPCRKFVSVLSNTDPGHS 352

Query: 1225 GAPYFNGKTVLGVHVGGGKNENCNYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVEAL 1404
            G PYF+GKT+LGVHVGG K EN NY++ +PP  G T+P YVFETTAP G++FT+EE+  L
Sbjct: 353  GTPYFSGKTLLGVHVGGAKEENANYLAPVPPRAGLTTPNYVFETTAPQGRIFTEEEILEL 412

Query: 1405 LEDFGLEEIR 1434
             ED+   EIR
Sbjct: 413  AEDYSFSEIR 422


>gb|AGD99099.1| P1P2 protein [Beet mild yellowing virus]
          Length = 1081

 Score =  800 bits (2065), Expect(2) = 0.0
 Identities = 412/631 (65%), Positives = 471/631 (74%), Gaps = 6/631 (0%)
 Frame = +3

Query: 1509 NAGGRKSGTDHRKNRTGNGYHRAKRQGEDWARRNTSRCCSFYTEGTLGPRCHPSHTH--D 1682
            +AGGRK G+D R NR        +R+   W + +   CCSFYT GTLG  C  SH H   
Sbjct: 464  DAGGRKGGSDRRNNRKRKHPREIRRK---WKKPS---CCSFYTAGTLGENCTASHVHCTS 517

Query: 1683 PDNYYA-PRCHCTIPGHACFYRKYLG--HGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPE 1853
             + Y   PRC C I GH C YR  L    GS+   G       E  R +     + DG E
Sbjct: 518  KEEYDEWPRCWCQIAGHDCHYRSNLRDKEGSDRQNGF------EIDRETSGRDTIVDGHE 571

Query: 1854 NAQTE-AKTWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANW 2030
             A  + A+    +A+ F ++F + Y W    E   + PGF +VG LPKFY  +QKG ++W
Sbjct: 572  EAPLKRAEKIQEQAKQFGRFFKTQYHWERAAE---VCPGFIKVGELPKFYFSKQKGCSDW 628

Query: 2031 GRQLIRDHPELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGK 2210
            G +L   HPELEE+T GFGWPKFG  AEL SLRLQA+RWLERA+ VKIPS+E+RERV+ K
Sbjct: 629  GTKLTSLHPELEEKTRGFGWPKFGPAAELKSLRLQAARWLERAEQVKIPSTEERERVVRK 688

Query: 2211 TVEAYQNVKTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVE 2390
             VEA+   +T GP ATR  +L W NFLEDFK AVFSLEL+AGVGVPY+AYG   HR W+E
Sbjct: 689  CVEAFSPTQTRGPMATRGNKLSWNNFLEDFKTAVFSLELEAGVGVPYVAYGRRTHRGWIE 748

Query: 2391 DPKLLPVLAQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRY 2570
            DP LLPVLA+FTF RLQK+ EV  + MS E+LVQ G+CDPIRLFVKGEPHK +KL EGRY
Sbjct: 749  DPDLLPVLARFTFDRLQKLSEVKFEHMSPEQLVQEGLCDPIRLFVKGEPHKQSKLDEGRY 808

Query: 2571 RLIMSVSLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVP 2750
            RLIMSVSLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTD QVV+F+  LSAQVGV 
Sbjct: 809  RLIMSVSLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDGQVVDFMQALSAQVGVN 868

Query: 2751 TREIIGNWPSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISN 2930
            T E++ NW S+LIPTDCSGFDWSVSDWLL D+MEVRNRLT+D+N+ T RLRA WLKC++N
Sbjct: 869  TAELLQNWKSHLIPTDCSGFDWSVSDWLLEDEMEVRNRLTLDINDLTRRLRAGWLKCLAN 928

Query: 2931 SVLCLSDGRLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTD 3110
            SVLCLSDG LLSQ+VPGVQK           RIRVMAAYH GA WAIAMGDDALESV  D
Sbjct: 929  SVLCLSDGTLLSQQVPGVQKSGSYNTSSSNSRIRVMAAYHSGASWAIAMGDDALESVDAD 988

Query: 3111 LSKYSSLGFKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYL 3290
            LS+YSSLGFKVEVS +LEFCSHIF+ ENLA+PVNKAKMLYKLIHGYEP CGNLEVL NYL
Sbjct: 989  LSRYSSLGFKVEVSSQLEFCSHIFEEENLAVPVNKAKMLYKLIHGYEPECGNLEVLTNYL 1048

Query: 3291 AACFSVFNELRSDPNLVATLYQWLVTPVQPQ 3383
            AACFS+ NELRSD  LVA+LYQWLV PVQPQ
Sbjct: 1049 AACFSILNELRSDQELVASLYQWLVLPVQPQ 1079



 Score =  355 bits (910), Expect(2) = 0.0
 Identities = 185/379 (48%), Positives = 233/379 (61%), Gaps = 11/379 (2%)
 Frame = +1

Query: 328  LTYEPHKPTMLPDHSYKELGAAILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAKST 507
            LTYE      L D +  E+ A I  + Y      SL  +    S F  G   A       
Sbjct: 54   LTYECPPEKTLKDFTLPEIQAEIWGRGYNAAEKFSLAVKQSLKSSFQYGVLKARESYGRV 113

Query: 508  LDFVLTSIVYYWAFTLWLLICTIWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGWPI 687
            L  +L   +  W++ +W L CT+W  +  YT+               VK VVWIFGGW  
Sbjct: 114  LKSILEWTILLWSYAIWALSCTVWYLLKNYTIEILMLSSLFAFTTFLVKLVVWIFGGWLT 173

Query: 688  YLIAGLSAILKFIFRNPLSKTPYKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHAGYA 867
             L+ GL A+ K I +   S+  Y  E++VKGF TF I Q PPRNC+L+I HAD SHAGYA
Sbjct: 174  SLVNGLFALTKCILKTLSSRKSYVCERSVKGFLTFTIKQSPPRNCILQIQHADGSHAGYA 233

Query: 868  TCISLFDGTTGLLTAYHLVN---EGS-----QVVSTHNGNSIPLDAFTTIYSSKARDQVL 1023
            TC++LFDGT GLLTA H+V+   EG      +VVST NGN IPLD F   Y+S+ RDQ+L
Sbjct: 234  TCVTLFDGTNGLLTAQHVVDDFYEGDPRKTLKVVSTRNGNKIPLDEFRVTYTSEKRDQLL 293

Query: 1024 MHGPPNWTGLLACKSAHFTPATQLAKSNATIFKLTNDGWVAANAKIEGVTATGNFVSVLS 1203
            MHGPPNW G+LACK+ H  PA+ +AKS AT F L++  W ++NA++ G +  G F+SVLS
Sbjct: 294  MHGPPNWEGVLACKAVHMIPASSVAKSKATFFALSDGEWHSSNAELVGTSKCGKFISVLS 353

Query: 1204 NTDCGHSGAPYFNGKTVLGVHVGGGK---NENCNYMSAIPPLVGTTSPKYVFETTAPMGK 1374
            +T  GHSG PYFNGK+VLGVH+G  K   +EN NYMS IP   G TSP Y+FETTA  GK
Sbjct: 354  DTKSGHSGTPYFNGKSVLGVHIGSPKEFESENVNYMSPIPRFPGLTSPNYIFETTALAGK 413

Query: 1375 VFTDEEVEALLEDFGLEEI 1431
             F+ EEVE L+EDF L+EI
Sbjct: 414  FFSQEEVEELMEDFSLQEI 432


>gb|AAZ57426.1| P1-P2 [Beet mild yellowing virus]
          Length = 1081

 Score =  795 bits (2053), Expect(2) = 0.0
 Identities = 411/629 (65%), Positives = 467/629 (74%), Gaps = 6/629 (0%)
 Frame = +3

Query: 1515 GGRKSGTDHRKNRTGNGYHRAKRQGEDWARRNTSRCCSFYTEGTLGPRCHPSHTH--DPD 1688
            GGRK G+D R NR        +R+   W + +   CCSFYT GTLG  C  SH H    +
Sbjct: 466  GGRKGGSDRRNNRKRKHPREIRRK---WKKPS---CCSFYTAGTLGENCTASHVHCTSKE 519

Query: 1689 NYYA-PRCHCTIPGHACFYRKYLG--HGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENA 1859
             Y   PRC C I GH C YR  L    GS+   G       E  R +     + DG E A
Sbjct: 520  EYDEWPRCWCQIAGHDCHYRSNLRDKEGSDRQNGF------EIDRETSGRDTIVDGHEEA 573

Query: 1860 QTE-AKTWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGR 2036
              + A+    +A+ F  +F + Y W    E   + PGF +VG LPKFY  +QKG ++WG 
Sbjct: 574  PLKRAEKIQEQAKQFGCFFKTQYHWERAAE---VCPGFIKVGELPKFYFSKQKGCSDWGT 630

Query: 2037 QLIRDHPELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTV 2216
            +L   HPELEE+T GFGWPKFG  AEL SLRLQA+RWLERA+ VKIPS+E+RERVI K V
Sbjct: 631  KLTSLHPELEEKTRGFGWPKFGPAAELKSLRLQAARWLERAEQVKIPSTEERERVIEKCV 690

Query: 2217 EAYQNVKTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDP 2396
            EA+   +T GP ATR  +L W NFLEDFK AVFSLEL+AGVGVPY+AYG   HR W+EDP
Sbjct: 691  EAFSPTQTRGPMATRGSKLSWNNFLEDFKTAVFSLELEAGVGVPYVAYGRRTHRGWIEDP 750

Query: 2397 KLLPVLAQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRL 2576
             LLPVLA+FTF RLQK+ E   + MS E+LVQ G+CDPIRLFVKGEPHK +KL EGRYRL
Sbjct: 751  DLLPVLARFTFDRLQKLSEAKFEHMSPEQLVQEGLCDPIRLFVKGEPHKQSKLDEGRYRL 810

Query: 2577 IMSVSLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTR 2756
            IMSVSLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTD QVV+F+  LSAQVGV T 
Sbjct: 811  IMSVSLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDGQVVDFMQALSAQVGVNTA 870

Query: 2757 EIIGNWPSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSV 2936
            E++ +W S+LIPTDCSGFDWSVSDWLL D+MEVRNRLT+D+N+ T RLRA WLKC++NSV
Sbjct: 871  ELLQDWKSHLIPTDCSGFDWSVSDWLLEDEMEVRNRLTLDINDLTRRLRAGWLKCLANSV 930

Query: 2937 LCLSDGRLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLS 3116
            LCLSDG LLSQ+VPGVQK           RIRVMAAYH GA WAIAMGDDALESV  DLS
Sbjct: 931  LCLSDGTLLSQQVPGVQKSGSYNTSSSNSRIRVMAAYHSGASWAIAMGDDALESVDADLS 990

Query: 3117 KYSSLGFKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAA 3296
            +YSSLGFKVEVS +LEFCSHIF+ ENLA+PVNKAKMLYKLIHGYEP CGNLEVL NYLAA
Sbjct: 991  RYSSLGFKVEVSSQLEFCSHIFEEENLAVPVNKAKMLYKLIHGYEPECGNLEVLTNYLAA 1050

Query: 3297 CFSVFNELRSDPNLVATLYQWLVTPVQPQ 3383
            CFS+ NELRSDP LVA LYQWLV PVQPQ
Sbjct: 1051 CFSILNELRSDPELVAPLYQWLVLPVQPQ 1079



 Score =  351 bits (901), Expect(2) = 0.0
 Identities = 185/379 (48%), Positives = 231/379 (60%), Gaps = 11/379 (2%)
 Frame = +1

Query: 328  LTYEPHKPTMLPDHSYKELGAAILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAKST 507
            LTYE      L D +  E+ A I  + Y  +   S   +    S F  G   A       
Sbjct: 54   LTYECPPEKTLKDFTLPEIQAEIWGRGYNAVEKFSFTVKQSLKSSFQYGVLKAKENYGRA 113

Query: 508  LDFVLTSIVYYWAFTLWLLICTIWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGWPI 687
            L   L  IV  W++ +W L CT W  +  YT+               VK  VWIFGGW  
Sbjct: 114  LRSTLKWIVLLWSYVIWALSCTAWYLLKNYTIEILMLSSLFAFTTFLVKLAVWIFGGWLT 173

Query: 688  YLIAGLSAILKFIFRNPLSKTPYKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHAGYA 867
             L+ GL A+ K I +   S+  Y  E++VKGF TF I Q PPRNC+L+I HAD SHAGYA
Sbjct: 174  SLVNGLFALTKRILKTLSSRKSYVCERSVKGFLTFTIKQSPPRNCILQIQHADGSHAGYA 233

Query: 868  TCISLFDGTTGLLTAYHLVN---EGS-----QVVSTHNGNSIPLDAFTTIYSSKARDQVL 1023
            TC++LFDGT GLLTA H+V+   EG      +VVST NGN IPLD F   Y+S+ RDQ+L
Sbjct: 234  TCVTLFDGTNGLLTAQHVVDDFYEGDPKKTLKVVSTRNGNKIPLDEFRVTYTSEKRDQLL 293

Query: 1024 MHGPPNWTGLLACKSAHFTPATQLAKSNATIFKLTNDGWVAANAKIEGVTATGNFVSVLS 1203
            MHGPPNW G+LACK+ H  PA+ +AKS AT F L++  W ++NA++ G +  G F+SVLS
Sbjct: 294  MHGPPNWEGVLACKAVHMIPASSVAKSKATFFALSDGEWHSSNAELVGTSKCGKFISVLS 353

Query: 1204 NTDCGHSGAPYFNGKTVLGVHVGGGK---NENCNYMSAIPPLVGTTSPKYVFETTAPMGK 1374
            +T  GHSG PYFNGK+VLGVH+G  K   +EN NYMS IP   G TSP Y+FETTA  GK
Sbjct: 354  DTKSGHSGTPYFNGKSVLGVHIGSPKEFESENVNYMSPIPRFPGLTSPNYIFETTALAGK 413

Query: 1375 VFTDEEVEALLEDFGLEEI 1431
             F+ EEVE L+EDF L+EI
Sbjct: 414  FFSQEEVEELMEDFSLQEI 432


>ref|NP_620479.2| Fusion protein [Beet mild yellowing virus]
          Length = 1081

 Score =  795 bits (2052), Expect(2) = 0.0
 Identities = 410/629 (65%), Positives = 468/629 (74%), Gaps = 6/629 (0%)
 Frame = +3

Query: 1515 GGRKSGTDHRKNRTGNGYHRAKRQGEDWARRNTSRCCSFYTEGTLGPRCHPSHTH--DPD 1688
            G RK G+D R NR        +R+   W + +   CCSFYT GTLG  C  SH H    +
Sbjct: 466  GERKGGSDRRNNRKRKHPREIRRK---WKKPS---CCSFYTAGTLGENCTASHVHCTSKE 519

Query: 1689 NYYA-PRCHCTIPGHACFYRKYLG--HGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENA 1859
             Y   PRC C I GH C YR  L    GS+   G       E  R +     + DG E A
Sbjct: 520  EYDEWPRCWCQIAGHDCHYRSNLRDKEGSDRQNGF------EIDRETSGRDTIVDGHEEA 573

Query: 1860 QTE-AKTWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGR 2036
              + A+    +A+ F ++F + Y W    E   + PGF +VG LPKFY  +QKG ++WG 
Sbjct: 574  PLKRAEKIQEQAKQFGRFFKTQYHWERAAE---VCPGFIKVGELPKFYFSKQKGCSDWGT 630

Query: 2037 QLIRDHPELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTV 2216
            +L   HPELEE+T GFGWPKFG  AEL SLRLQA+RWLERA+ VKIPS+E+RERV+ K V
Sbjct: 631  KLTSLHPELEEKTRGFGWPKFGPAAELKSLRLQAARWLERAEQVKIPSTEERERVVRKCV 690

Query: 2217 EAYQNVKTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDP 2396
            EA+   +T GP ATR  +L W NFLEDFK AVFSLEL+AGVGVPY+AYG   HR W+EDP
Sbjct: 691  EAFSPTQTRGPMATRGNKLSWNNFLEDFKTAVFSLELEAGVGVPYVAYGRRTHRGWIEDP 750

Query: 2397 KLLPVLAQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRL 2576
             LLPVLA+FTF RLQK+ EV  + MS E+LVQ G+CDPIRLFVKGEPHK +KL EGRYRL
Sbjct: 751  DLLPVLARFTFDRLQKLSEVKFEHMSPEQLVQEGLCDPIRLFVKGEPHKQSKLDEGRYRL 810

Query: 2577 IMSVSLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTR 2756
            IMSVSLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTD QVV+F+  LSAQVGV T 
Sbjct: 811  IMSVSLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDGQVVDFMQALSAQVGVNTA 870

Query: 2757 EIIGNWPSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSV 2936
            E++ NW S+LIPTDCSGFDWSVSDWLL D+MEVRNRLT+D+N+ T RLRA WLKC++NSV
Sbjct: 871  ELLQNWKSHLIPTDCSGFDWSVSDWLLEDEMEVRNRLTLDINDLTRRLRAGWLKCLANSV 930

Query: 2937 LCLSDGRLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLS 3116
            LCLSDG LLSQ+VPGVQK           RIRVMAAYH GA WAIAMGDDALESV  DLS
Sbjct: 931  LCLSDGTLLSQQVPGVQKSGSYNTSSSNSRIRVMAAYHSGASWAIAMGDDALESVDADLS 990

Query: 3117 KYSSLGFKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAA 3296
            +YSSLGFKVEVS +LEFCSHIF+ ENLA+PVNKAKMLYKLIHGYEP CGNLEVL NYLAA
Sbjct: 991  RYSSLGFKVEVSSQLEFCSHIFEEENLAVPVNKAKMLYKLIHGYEPECGNLEVLTNYLAA 1050

Query: 3297 CFSVFNELRSDPNLVATLYQWLVTPVQPQ 3383
            CFS+ NELRSD  LVA+LYQWLV PVQPQ
Sbjct: 1051 CFSILNELRSDQELVASLYQWLVLPVQPQ 1079



 Score =  358 bits (919), Expect(2) = 0.0
 Identities = 199/455 (43%), Positives = 262/455 (57%), Gaps = 22/455 (4%)
 Frame = +1

Query: 229  ITSYIPPVGVNVAGYGDFSPFLGRNLTLQ----LTSQLTYEPHKPTMLPDHSYKELGAAI 396
            ++S  P     + G      + G  +T +      + LTYE      L D +  E+ A I
Sbjct: 17   VSSSTPGASFTLPGNASLYDWPGSTITAEPCYPALATLTYECPPEKTLKDFTLPEIQAEI 76

Query: 397  LVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAKSTLDFVLTSIVYYWAFTLWLLICTI 576
              + Y      SL  +    S F  G   A       L  +L   +  W++ +W L CT+
Sbjct: 77   WGRGYNAAEKFSLAVKQSLKSSFQYGVLKARESYGRVLKSILEWTILLWSYAIWALSCTV 136

Query: 577  WKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGWPIYLIAGLSAILKFIFRNPLSKTPY 756
            W  +  YT+               VK VVWIFGGW   L+ GL A+ K I +   S+  Y
Sbjct: 137  WYLLKNYTIEILMLSSLFAFTTFLVKLVVWIFGGWLTSLVNGLFALTKCILKTLSSRKSY 196

Query: 757  KHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHAGYATCISLFDGTTGLLTAYHLVN--- 927
              E++VKGF TF I Q PPRNC+L+I HAD SHAGYATC++LFDGT GLLTA H+V+   
Sbjct: 197  VCERSVKGFLTFTIKQSPPRNCILQIQHADGSHAGYATCVTLFDGTNGLLTAQHVVDDFY 256

Query: 928  EGS-----QVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPPNWTGLLACKSAHFTPATQ 1092
            EG      +VVST NGN IPLD F   Y+S+ RDQ+LMHGPPNW G+LACK+ H  PA+ 
Sbjct: 257  EGDPRKTLKVVSTRNGNKIPLDEFRVTYTSEKRDQLLMHGPPNWEGVLACKAVHMIPASS 316

Query: 1093 LAKSNATIFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCGHSGAPYFNGKTVLGVHVG 1272
            +AKS AT F L++  W ++NA++ G +  G F+SVLS+T  GHSG PYFNGK+VLGVH+G
Sbjct: 317  VAKSKATFFALSDGEWHSSNAELVGTSKCGKFISVLSDTKSGHSGTPYFNGKSVLGVHIG 376

Query: 1273 GGK---NENCNYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVEALLEDFGLEEIRWMA 1443
              K   +EN NYMS IP   G TSP Y+FETTA  GK F+ EEVE L+EDF L+EI  +A
Sbjct: 377  SPKEFESENVNYMSPIPRFPGLTSPNYIFETTALAGKFFSQEEVEELMEDFSLQEIYSIA 436

Query: 1444 KNKSERQRLK-------LNDVMEEEYTYEMQGEGK 1527
              + +  + +        +DV+ E  +  MQGE K
Sbjct: 437  TARGKYIKYEACPGEETFHDVLTE--SSPMQGERK 469


>gb|AFM68928.1| P1-P2 fusion protein [Cucurbit aphid-borne yellows virus]
          Length = 1054

 Score =  789 bits (2038), Expect(2) = 0.0
 Identities = 395/626 (63%), Positives = 469/626 (74%), Gaps = 2/626 (0%)
 Frame = +3

Query: 1512 AGGRKSGTDHRKNRTGNGYHRAKRQGEDWAR--RNTSRCCSFYTEGTLGPRCHPSHTHDP 1685
            +G R  G D R NRT     R   +G  WA+  R T  CCS + EG         H H  
Sbjct: 446  SGNRAGGRDRRNNRT-----RCHPRG--WAQKWRRTVSCCSLFPEG--------QHVHSS 490

Query: 1686 DNYYAPRCHCTIPGHACFYRKYLGHGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENAQT 1865
            +    P C C+IP H CF+R  +G+ +  +G +  P+   E  GS    +  +  + AQT
Sbjct: 491  EQTGRPHCFCSIPHHQCFHRLCVGNQTSDNGQNRCPFN-REAGGSSLDGSSHEETKAAQT 549

Query: 1866 EAKTWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGRQLI 2045
              + +     DF+ +F + Y W   GEE   APGF +VG LP+FYH +QK  +NWG ++ 
Sbjct: 550  RQERFEKLTTDFSCFFDAQYIWEQGGEE---APGFDKVGSLPQFYHAKQKKSSNWGDKIC 606

Query: 2046 RDHPELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTVEAY 2225
            + HPE+ + T GFGWP+FGA+AEL SLRLQA+RWLERA+ VKIPSSE+RE VI + V AY
Sbjct: 607  KQHPEMGDLTKGFGWPQFGAKAELKSLRLQAARWLERAQSVKIPSSEEREHVIERCVRAY 666

Query: 2226 QNVKTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDPKLL 2405
             NVKTNGP ATR  +L W NFL+DFKQAV SLE+DAG+GVPYIAYG P HR WVED +LL
Sbjct: 667  SNVKTNGPMATRGDRLSWDNFLQDFKQAVLSLEMDAGIGVPYIAYGKPTHRGWVEDQELL 726

Query: 2406 PVLAQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRLIMS 2585
            P+LA+ TF RLQKMLEV  + +S  ELV+ G+CDPIR+FVKGEPHK +KL EGRYRLIMS
Sbjct: 727  PILARLTFNRLQKMLEVRFEDLSPAELVREGLCDPIRVFVKGEPHKQSKLDEGRYRLIMS 786

Query: 2586 VSLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTREII 2765
            VSLVDQLVARVLFQNQNKREIALWR +PSKPGFGLSTD+QV EF+ +LSAQVG+   E+I
Sbjct: 787  VSLVDQLVARVLFQNQNKREIALWRVVPSKPGFGLSTDEQVAEFMQILSAQVGLTPSEVI 846

Query: 2766 GNWPSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSVLCL 2945
              W +++I TDCSGFDWSVSDWLL DDMEVRNRLT+DLNE T RLRA+WLKCISNSVLCL
Sbjct: 847  TEWRTHMIATDCSGFDWSVSDWLLEDDMEVRNRLTLDLNETTRRLRAAWLKCISNSVLCL 906

Query: 2946 SDGRLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLSKYS 3125
            SDG LL+QRVPGVQK           RIRVMAAYHCGA+WA+AMGDDALES  ++L +Y 
Sbjct: 907  SDGTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAYHCGAEWAMAMGDDALESACSNLERYK 966

Query: 3126 SLGFKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAACFS 3305
            SLGFKVE S +LEFCSHIF+ E+LAIPVNKAKMLYKLIHGYEP CGN+EVLVNYLAACFS
Sbjct: 967  SLGFKVEESSKLEFCSHIFEKEDLAIPVNKAKMLYKLIHGYEPECGNVEVLVNYLAACFS 1026

Query: 3306 VFNELRSDPNLVATLYQWLVTPVQPQ 3383
            + NELRSDP+LV TL++WLV PVQPQ
Sbjct: 1027 ILNELRSDPSLVETLHRWLVLPVQPQ 1052



 Score =  330 bits (846), Expect(2) = 0.0
 Identities = 164/381 (43%), Positives = 222/381 (58%)
 Frame = +1

Query: 325  QLTYEPHKPTMLPDHSYKELGAAILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAKS 504
            QL Y+      L D S +++   +  + Y D R  SL          + GA       +S
Sbjct: 53   QLIYDCPPQKTLRDFSSRDITQELWERGYNDARQTSLEVMKHLKDLSMSGARRLRAGLES 112

Query: 505  TLDFVLTSIVYYWAFTLWLLICTIWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGWP 684
             L        Y W+  +W  +C IW  + +YT+               VK   WIFG  P
Sbjct: 113  LLHVTFRVTTYLWSSLIWAAVCAIWYLLQKYTIEMLLLASLYMCTVYMVKMAAWIFGDLP 172

Query: 685  IYLIAGLSAILKFIFRNPLSKTPYKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHAGY 864
            I+L+    ++ + + R    K  YK EK+V+GF ++ I Q PP+N VL++ + D SHAGY
Sbjct: 173  IFLLKAGLSMARGVSRTLWYKRSYKAEKSVEGFLSYNIPQSPPKNSVLQVQYKDGSHAGY 232

Query: 865  ATCISLFDGTTGLLTAYHLVNEGSQVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPPNW 1044
            ATC++L+DGT GLLTA+H+   GS++VST NGN IPL  F +I  S+ RD VL+ GPPNW
Sbjct: 233  ATCVTLYDGTNGLLTAHHVAVPGSKIVSTRNGNKIPLSEFRSIMESEKRDLVLLAGPPNW 292

Query: 1045 TGLLACKSAHFTPATQLAKSNATIFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCGHS 1224
             G LAC++     A  L KS AT F    +GW ++NA+I G+       SVLSNTD GHS
Sbjct: 293  EGALACRAVPLQTAQNLCKSKATFFAFNGEGWTSSNAEIVGIAQGRTHASVLSNTDAGHS 352

Query: 1225 GAPYFNGKTVLGVHVGGGKNENCNYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVEAL 1404
            G PYFNGKTVLGVHVGG K EN NYM+ IPP+ G TSP Y FETTAP G++FT EE++ L
Sbjct: 353  GTPYFNGKTVLGVHVGGAKEENANYMAPIPPVNGLTSPNYAFETTAPQGRLFTQEEIDEL 412

Query: 1405 LEDFGLEEIRWMAKNKSERQR 1467
            +E+F   EI  +  ++  R++
Sbjct: 413  IEEFSFSEITSIMGHRQSRKQ 433


>ref|NP_620101.2| replicase fusion protein [Cucurbit aphid-borne yellows virus]
          Length = 1054

 Score =  787 bits (2033), Expect(2) = 0.0
 Identities = 395/624 (63%), Positives = 463/624 (74%)
 Frame = +3

Query: 1512 AGGRKSGTDHRKNRTGNGYHRAKRQGEDWARRNTSRCCSFYTEGTLGPRCHPSHTHDPDN 1691
            +G R  G D R NRT     R   +G     R T  CCS + EG         H H  + 
Sbjct: 447  SGNRAGGGDRRNNRT-----RCHPRGWAHKWRRTVSCCSLFPEG--------QHVHTSEQ 493

Query: 1692 YYAPRCHCTIPGHACFYRKYLGHGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENAQTEA 1871
               P C C+IP H CFYR ++G+ +  +G +  P+   E  G   G    +  E AQT  
Sbjct: 494  TGKPHCFCSIPHHQCFYRHFVGNQTGNNGQNRCPFN-REASGPSLGGQSHEETEVAQTRQ 552

Query: 1872 KTWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGRQLIRD 2051
            + +   A DF+ +F + Y W   GEE   APGF +VG LP+FYH +QK  +NWG ++ + 
Sbjct: 553  EKFEELATDFSSFFDAQYTWEQGGEE---APGFDKVGSLPQFYHAKQKKSSNWGDKICKQ 609

Query: 2052 HPELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTVEAYQN 2231
            HPE+ + T GFGWP+FGA+AEL SLRLQA+RWLERA+ VKIPSSE+RE VI +   AYQ 
Sbjct: 610  HPEMGDLTKGFGWPQFGAKAELKSLRLQAARWLERAQSVKIPSSEEREHVIERCCRAYQA 669

Query: 2232 VKTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDPKLLPV 2411
             KTNGP ATR  +L W NFL+DFKQAV SLE+DAG+GVPYIAYG P HR WVED KLLP+
Sbjct: 670  AKTNGPMATRGDRLSWDNFLQDFKQAVLSLEMDAGIGVPYIAYGKPTHRGWVEDKKLLPI 729

Query: 2412 LAQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRLIMSVS 2591
            LA+ TF RLQKMLEV    +S  ELV+RG+CDPIR+FVKGEPHK AKL EGRYRLIMSVS
Sbjct: 730  LARLTFNRLQKMLEVRYVDLSPAELVRRGLCDPIRVFVKGEPHKQAKLDEGRYRLIMSVS 789

Query: 2592 LVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTREIIGN 2771
            LVDQLVARVLFQNQNKREIALWR +PSKPGFGLSTD+QV EF+ +LSAQVG+   ++I  
Sbjct: 790  LVDQLVARVLFQNQNKREIALWRVVPSKPGFGLSTDEQVAEFMQILSAQVGLTPSDLITE 849

Query: 2772 WPSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSVLCLSD 2951
            W +++I TDCSGFDWSVSDWLL DDMEVRNRLT+DLNE T RLR SWL CISNSVLCLSD
Sbjct: 850  WRAHMIATDCSGFDWSVSDWLLEDDMEVRNRLTLDLNETTRRLR-SWLYCISNSVLCLSD 908

Query: 2952 GRLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLSKYSSL 3131
            G LL+QRVPGVQK           RIRVMAAYHCGA+WA+AMGDDALES  ++L +Y SL
Sbjct: 909  GTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAYHCGAEWAMAMGDDALESACSNLERYKSL 968

Query: 3132 GFKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAACFSVF 3311
            GFKVE S +LEFCSHIF+ E+LAIPVNKAKMLYKLIHGYEP CGN+EVL+NYLAACFS+ 
Sbjct: 969  GFKVEESSKLEFCSHIFEKEDLAIPVNKAKMLYKLIHGYEPECGNVEVLINYLAACFSIL 1028

Query: 3312 NELRSDPNLVATLYQWLVTPVQPQ 3383
            NELRSDP+LV TL+QWLV PVQPQ
Sbjct: 1029 NELRSDPSLVETLHQWLVAPVQPQ 1052



 Score =  330 bits (845), Expect(2) = 0.0
 Identities = 165/397 (41%), Positives = 232/397 (58%)
 Frame = +1

Query: 325  QLTYEPHKPTMLPDHSYKELGAAILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAKS 504
            QL Y+     ML D S +++   +  + Y + R     A     +  + G    H   +S
Sbjct: 53   QLIYDCPPQKMLRDFSSRDITLELWERGYNETRQAFSEAMQNLQNLLMSGVRQFHTGLES 112

Query: 505  TLDFVLTSIVYYWAFTLWLLICTIWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGWP 684
             L  +L +  Y W   +W   C  W  +++YT+               VK   WIFG  P
Sbjct: 113  LLHVILQTAAYLWTSLIWATACATWYLLSKYTIEMLTLASLYISTVYMVKMAAWIFGDLP 172

Query: 685  IYLIAGLSAILKFIFRNPLSKTPYKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHAGY 864
            I L+    ++++ + R    K  Y  EK+V+G+ +F+I Q PP+N VL++ + D SHAGY
Sbjct: 173  ISLLKAGLSMVRGVSRALWYKRSYNAEKSVEGYLSFKIPQNPPKNSVLQVQYKDGSHAGY 232

Query: 865  ATCISLFDGTTGLLTAYHLVNEGSQVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPPNW 1044
            ATC++L++GT GLLTAYH+   GS+VVST NGN +PL  F +I  S+ RD VL+ GPPNW
Sbjct: 233  ATCVTLYNGTNGLLTAYHVAVPGSKVVSTRNGNKVPLSEFRSIMESEKRDLVLLAGPPNW 292

Query: 1045 TGLLACKSAHFTPATQLAKSNATIFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCGHS 1224
             G LACK+  F  A  L KS A+ +    +GW+++NA+I G+       SVLSNTD GHS
Sbjct: 293  EGTLACKAVQFQSAQNLCKSKASFYAYDGEGWISSNAEIVGIAEGKTHASVLSNTDAGHS 352

Query: 1225 GAPYFNGKTVLGVHVGGGKNENCNYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVEAL 1404
            G PYFNG+TVLGVHVGG K+EN NYM+ IPP+ G TSP Y FETTAP G++FT EE+E L
Sbjct: 353  GTPYFNGRTVLGVHVGGAKDENFNYMAPIPPVYGLTSPSYEFETTAPQGRLFTQEEIEEL 412

Query: 1405 LEDFGLEEIRWMAKNKSERQRLKLNDVMEEEYTYEMQ 1515
            +E+F   EI  +  ++   Q   ++D    +  YE +
Sbjct: 413  IEEFSFSEITSIMGHRRFHQ---MHDSQRHQADYEYE 446


>emb|CAA54251.2| unnamed protein product [Cucurbit aphid-borne yellows virus]
          Length = 1054

 Score =  786 bits (2031), Expect(2) = 0.0
 Identities = 395/624 (63%), Positives = 463/624 (74%)
 Frame = +3

Query: 1512 AGGRKSGTDHRKNRTGNGYHRAKRQGEDWARRNTSRCCSFYTEGTLGPRCHPSHTHDPDN 1691
            +G R  G D R NRT     R   +G     R T  CCS + EG         H H  + 
Sbjct: 447  SGKRAGGGDRRNNRT-----RCHPRGWAHKWRRTVSCCSLFPEG--------QHVHTSEQ 493

Query: 1692 YYAPRCHCTIPGHACFYRKYLGHGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENAQTEA 1871
               P C C+IP H CFYR ++G+ +  +G +  P+   E  G   G    +  E AQT  
Sbjct: 494  TGKPHCFCSIPHHQCFYRHFVGNQTGNNGQNRCPFN-REASGPSLGGQSHEETEVAQTRQ 552

Query: 1872 KTWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGRQLIRD 2051
            + +   A DF+ +F + Y W   GEE   APGF +VG LP+FYH +QK  +NWG ++ + 
Sbjct: 553  EKFEELATDFSSFFDAQYTWEQGGEE---APGFDKVGSLPQFYHAKQKKSSNWGDKICKQ 609

Query: 2052 HPELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTVEAYQN 2231
            HPE+ + T GFGWP+FGA+AEL SLRLQA+RWLERA+ VKIPSSE+RE VI +   AYQ 
Sbjct: 610  HPEMGDLTKGFGWPQFGAKAELKSLRLQAARWLERAQSVKIPSSEEREHVIERCCRAYQA 669

Query: 2232 VKTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDPKLLPV 2411
             KTNGP ATR  +L W NFL+DFKQAV SLE+DAG+GVPYIAYG P HR WVED KLLP+
Sbjct: 670  AKTNGPMATRGDRLSWDNFLQDFKQAVLSLEMDAGIGVPYIAYGKPTHRGWVEDKKLLPI 729

Query: 2412 LAQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRLIMSVS 2591
            LA+ TF RLQKMLEV    +S  ELV+RG+CDPIR+FVKGEPHK AKL EGRYRLIMSVS
Sbjct: 730  LARLTFNRLQKMLEVRYVDLSPAELVRRGLCDPIRVFVKGEPHKQAKLDEGRYRLIMSVS 789

Query: 2592 LVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTREIIGN 2771
            LVDQLVARVLFQNQNKREIALWR +PSKPGFGLSTD+QV EF+ +LSAQVG+   ++I  
Sbjct: 790  LVDQLVARVLFQNQNKREIALWRVVPSKPGFGLSTDEQVAEFMQILSAQVGLTPSDLITE 849

Query: 2772 WPSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSVLCLSD 2951
            W +++I TDCSGFDWSVSDWLL DDMEVRNRLT+DLNE T RLR SWL CISNSVLCLSD
Sbjct: 850  WRAHMIATDCSGFDWSVSDWLLEDDMEVRNRLTLDLNETTRRLR-SWLYCISNSVLCLSD 908

Query: 2952 GRLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLSKYSSL 3131
            G LL+QRVPGVQK           RIRVMAAYHCGA+WA+AMGDDALES  ++L +Y SL
Sbjct: 909  GTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAYHCGAEWAMAMGDDALESACSNLERYKSL 968

Query: 3132 GFKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAACFSVF 3311
            GFKVE S +LEFCSHIF+ E+LAIPVNKAKMLYKLIHGYEP CGN+EVL+NYLAACFS+ 
Sbjct: 969  GFKVEESSKLEFCSHIFEKEDLAIPVNKAKMLYKLIHGYEPECGNVEVLINYLAACFSIL 1028

Query: 3312 NELRSDPNLVATLYQWLVTPVQPQ 3383
            NELRSDP+LV TL+QWLV PVQPQ
Sbjct: 1029 NELRSDPSLVETLHQWLVAPVQPQ 1052



 Score =  330 bits (845), Expect(2) = 0.0
 Identities = 165/397 (41%), Positives = 232/397 (58%)
 Frame = +1

Query: 325  QLTYEPHKPTMLPDHSYKELGAAILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAKS 504
            QL Y+     ML D S +++   +  + Y + R     A     +  + G    H   +S
Sbjct: 53   QLIYDCPPQKMLRDFSSRDITLELWERGYNETRQAFSEAMQNLQNLLMSGVRQFHTGLES 112

Query: 505  TLDFVLTSIVYYWAFTLWLLICTIWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGWP 684
             L  +L +  Y W   +W   C  W  +++YT+               VK   WIFG  P
Sbjct: 113  LLHVILQTAAYLWTSLIWATACATWYLLSKYTIEMLTLASLYISTVYMVKMAAWIFGDLP 172

Query: 685  IYLIAGLSAILKFIFRNPLSKTPYKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHAGY 864
            I L+    ++++ + R    K  Y  EK+V+G+ +F+I Q PP+N VL++ + D SHAGY
Sbjct: 173  ISLLKAGLSMVRGVSRALWYKRSYNAEKSVEGYLSFKIPQNPPKNSVLQVQYKDGSHAGY 232

Query: 865  ATCISLFDGTTGLLTAYHLVNEGSQVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPPNW 1044
            ATC++L++GT GLLTAYH+   GS+VVST NGN +PL  F +I  S+ RD VL+ GPPNW
Sbjct: 233  ATCVTLYNGTNGLLTAYHVAVPGSKVVSTRNGNKVPLSEFRSIMESEKRDLVLLAGPPNW 292

Query: 1045 TGLLACKSAHFTPATQLAKSNATIFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCGHS 1224
             G LACK+  F  A  L KS A+ +    +GW+++NA+I G+       SVLSNTD GHS
Sbjct: 293  EGTLACKAVQFQSAQNLCKSKASFYAYDGEGWISSNAEIVGIAEGKTHASVLSNTDAGHS 352

Query: 1225 GAPYFNGKTVLGVHVGGGKNENCNYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVEAL 1404
            G PYFNG+TVLGVHVGG K+EN NYM+ IPP+ G TSP Y FETTAP G++FT EE+E L
Sbjct: 353  GTPYFNGRTVLGVHVGGAKDENFNYMAPIPPVYGLTSPSYEFETTAPQGRLFTQEEIEEL 412

Query: 1405 LEDFGLEEIRWMAKNKSERQRLKLNDVMEEEYTYEMQ 1515
            +E+F   EI  +  ++   Q   ++D    +  YE +
Sbjct: 413  IEEFSFSEITSIMGHRRFHQ---MHDSQRHQADYEYE 446


>gb|ADE48860.1| P1-P2 fusion protein [Cucurbit aphid-borne yellows virus]
          Length = 1056

 Score =  788 bits (2034), Expect(2) = 0.0
 Identities = 394/626 (62%), Positives = 466/626 (74%), Gaps = 2/626 (0%)
 Frame = +3

Query: 1512 AGGRKSGTDHRKNRTGNGYHRAKRQGEDWAR--RNTSRCCSFYTEGTLGPRCHPSHTHDP 1685
            +G R  G D R NRT       K     WA+  R T  CCS + EG         H H  
Sbjct: 448  SGKRAGGRDRRNNRT-------KCHPRGWAQKWRRTVSCCSLFPEG--------QHVHTS 492

Query: 1686 DNYYAPRCHCTIPGHACFYRKYLGHGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENAQT 1865
            +    P C C+IP H CFYR ++G+ +  +G +  P+   E  GS  G +  +  + AQT
Sbjct: 493  EQTGKPHCFCSIPHHQCFYRHFVGNQTSHNGQNRCPFN-REAGGSSPGGSSHEETQVAQT 551

Query: 1866 EAKTWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGRQLI 2045
              + +     DF+ +F + Y W   GEE   APGF +VG LP+FYH +QK  +NWG ++ 
Sbjct: 552  RQEKFEKLTADFSCFFDTQYIWEQGGEE---APGFDKVGSLPQFYHAKQKKSSNWGDKIC 608

Query: 2046 RDHPELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTVEAY 2225
            + HPE+ + T GFGWP+FGA+AEL SLRLQA+RWLERA+ VKIPS E+RE VI +   AY
Sbjct: 609  KQHPEMGDLTKGFGWPQFGAKAELKSLRLQAARWLERAQSVKIPSPEEREHVIERCCRAY 668

Query: 2226 QNVKTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDPKLL 2405
            Q  KTNGP ATR  +L W NFL+DFKQAV SLE+DAG+GVPYIAYG P HR WVED +LL
Sbjct: 669  QAAKTNGPMATRGDRLSWDNFLQDFKQAVLSLEMDAGIGVPYIAYGKPTHRGWVEDKQLL 728

Query: 2406 PVLAQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRLIMS 2585
            P+LA+ TF RLQKMLEV  D +S  ELV+ G+CDPIR+FVKGEPHK +KL EGRYRLIMS
Sbjct: 729  PILARLTFNRLQKMLEVRHDDLSPAELVREGLCDPIRVFVKGEPHKQSKLDEGRYRLIMS 788

Query: 2586 VSLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTREII 2765
            VSLVDQLVARVLFQNQNKREIALWR +PSKPGFGLSTD+QVVEF+ +LSAQVG+   E+I
Sbjct: 789  VSLVDQLVARVLFQNQNKREIALWRVVPSKPGFGLSTDEQVVEFMQILSAQVGLTPSELI 848

Query: 2766 GNWPSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSVLCL 2945
              W +++I TDCSGFDWSVSDWLL DDMEVRNRLT+DLNE T RLRA+WL CISNSVLCL
Sbjct: 849  TEWRAHMIATDCSGFDWSVSDWLLEDDMEVRNRLTLDLNETTRRLRAAWLFCISNSVLCL 908

Query: 2946 SDGRLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLSKYS 3125
            SDG LL+QRVPGVQK           RIRVMAAYHCGA+WA+AMGDDALES  ++L +Y 
Sbjct: 909  SDGTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAYHCGAEWAMAMGDDALESACSNLERYK 968

Query: 3126 SLGFKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAACFS 3305
            SLGFKVE S +LEFCSHIF+ E+LAIPVNKAKMLYKLIHGYEP CGN+EVL+NYLAACFS
Sbjct: 969  SLGFKVEESSKLEFCSHIFEKEDLAIPVNKAKMLYKLIHGYEPECGNVEVLINYLAACFS 1028

Query: 3306 VFNELRSDPNLVATLYQWLVTPVQPQ 3383
            + NELRSDP+LV TL+QWLV PVQPQ
Sbjct: 1029 ILNELRSDPSLVETLHQWLVLPVQPQ 1054



 Score =  325 bits (834), Expect(2) = 0.0
 Identities = 173/434 (39%), Positives = 245/434 (56%)
 Frame = +1

Query: 214  ANNWGITSYIPPVGVNVAGYGDFSPFLGRNLTLQLTSQLTYEPHKPTMLPDHSYKELGAA 393
            A+++  T +IP   VN + + D +         Q+  QL Y+     ML D S +++   
Sbjct: 19   ASSYQGTMFIPLEPVNASYWLDSTAIAVPPSPHQV--QLIYDCPPQKMLRDFSSRDITRE 76

Query: 394  ILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAKSTLDFVLTSIVYYWAFTLWLLICT 573
            +  + Y + R     A     +  + G   +    +S L     ++ Y W+  +W   C 
Sbjct: 77   LWGRGYNETRLAFSEAMQNLQNLLMSGVRQSRAGLESLLHVTFRAVTYLWSSLIWASACA 136

Query: 574  IWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGWPIYLIAGLSAILKFIFRNPLSKTP 753
            IW  + EYT+               VK   WIFG  PI+L+    ++++ I +    K  
Sbjct: 137  IWYLLREYTIEMLSLASLYMSTVYMVKMAAWIFGDLPIFLLKAGLSMMRGISKALWFKRS 196

Query: 754  YKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHAGYATCISLFDGTTGLLTAYHLVNEG 933
            Y  EK+V+GF +F+I Q PP++ VL++ + D SHAGYATC++L++GT GLLTA+H+   G
Sbjct: 197  YNAEKSVEGFLSFKIPQSPPKHSVLQVQYKDGSHAGYATCVTLYNGTNGLLTAHHVAVPG 256

Query: 934  SQVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPPNWTGLLACKSAHFTPATQLAKSNAT 1113
            S++VST NGN IPL  F +I  S+ RD VL+ GPPNW G LACK+ HF  A  L KS AT
Sbjct: 257  SKIVSTRNGNKIPLSEFRSIMESEKRDLVLLAGPPNWEGTLACKAVHFQDAQSLCKSKAT 316

Query: 1114 IFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCGHSGAPYFNGKTVLGVHVGGGKNENC 1293
             +    + W ++NA I G+       SVLSNTD GHSG PYFNGKTVLGVHVGG K EN 
Sbjct: 317  FYAYNGEEWTSSNADIVGIAQGKTHASVLSNTDAGHSGTPYFNGKTVLGVHVGGAKEENA 376

Query: 1294 NYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVEALLEDFGLEEIRWMAKNKSERQRLK 1473
            NYM+ IP + G TSP Y FETTAP G++FT EE+E L+E+F   EI  +  ++   Q   
Sbjct: 377  NYMAPIPGIYGLTSPSYEFETTAPQGRLFTQEEIEELIEEFSFSEITSIMGHRRFHQ--- 433

Query: 1474 LNDVMEEEYTYEMQ 1515
            ++D    +  YE +
Sbjct: 434  MHDSQRHQADYEYE 447


>gb|ABV55642.1| P1-P2 fusion protein [Cucurbit aphid-borne yellows virus]
          Length = 1056

 Score =  788 bits (2036), Expect(2) = 0.0
 Identities = 398/630 (63%), Positives = 463/630 (73%), Gaps = 2/630 (0%)
 Frame = +3

Query: 1500 YL*NAGGRKSGTDHRKNRTGNGYHRAKRQGEDWAR--RNTSRCCSFYTEGTLGPRCHPSH 1673
            Y   +G R  G D R NRT       K     WA   R T  CCS + EG         H
Sbjct: 444  YKYESGKRAGGRDRRNNRT-------KCHPRGWAHKWRRTVSCCSLFPEG--------QH 488

Query: 1674 THDPDNYYAPRCHCTIPGHACFYRKYLGHGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPE 1853
             H  +    P C C+IP H CFYR ++G+ +  +G +  P+   E  GS  G    +  +
Sbjct: 489  VHTSEQKGKPHCFCSIPHHQCFYRHFVGNQTSHNGQNRCPFD-REAGGSSPGEPSHEETK 547

Query: 1854 NAQTEAKTWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWG 2033
             AQT  + +     DF+ +F + Y W   GEE   APGF +VG LPKFY+ +QK  +NWG
Sbjct: 548  AAQTRQEKFEKLTADFSCFFDAQYIWEQGGEE---APGFDKVGSLPKFYYAKQKKSSNWG 604

Query: 2034 RQLIRDHPELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKT 2213
             ++ + HPE+ + T GFGWP+FGAEAEL SLRLQA+RWLERA+ VKIPS E+RERVI + 
Sbjct: 605  NKICKQHPEMGDLTKGFGWPQFGAEAELKSLRLQAARWLERAQSVKIPSREERERVIERC 664

Query: 2214 VEAYQNVKTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVED 2393
              AYQ  KTNGP  TR  +L W NFL+DFKQAV SLE DAG+GVPYIAYG P HR WVED
Sbjct: 665  CRAYQAAKTNGPMVTRGDRLSWDNFLQDFKQAVLSLEKDAGIGVPYIAYGRPTHRGWVED 724

Query: 2394 PKLLPVLAQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYR 2573
             +LLP+LA+ TF RLQKMLEV  D +S  ELVQ G+CDPIR+FVKGEPHK +KL EGRYR
Sbjct: 725  KQLLPILARLTFNRLQKMLEVRHDDLSPAELVQEGLCDPIRVFVKGEPHKQSKLDEGRYR 784

Query: 2574 LIMSVSLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPT 2753
            LIMSVSLVDQLVARVLFQNQNKREIALWR +PSKPGFGLSTD+QVVEF+ +LSAQVG+  
Sbjct: 785  LIMSVSLVDQLVARVLFQNQNKREIALWRVVPSKPGFGLSTDEQVVEFMQILSAQVGLTP 844

Query: 2754 REIIGNWPSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNS 2933
             E+I  W +++I TDCSGFDWSVSDWLL DDMEVRNRLT+DLNE T RLRA+WL CISNS
Sbjct: 845  SELITEWRAHMIATDCSGFDWSVSDWLLEDDMEVRNRLTLDLNETTRRLRAAWLHCISNS 904

Query: 2934 VLCLSDGRLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDL 3113
            VLCLSDG LL+QRVPGVQK           RIRVMAAYHCGA+WAIAMGDDALES  ++L
Sbjct: 905  VLCLSDGTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAYHCGAEWAIAMGDDALESACSNL 964

Query: 3114 SKYSSLGFKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLA 3293
             +Y SLGFKVE S +LEFCSHIF+ E+LAIPVNKAKMLYKLIHGYEP CGN+EVL+NYLA
Sbjct: 965  ERYKSLGFKVEESSKLEFCSHIFEKEDLAIPVNKAKMLYKLIHGYEPECGNVEVLINYLA 1024

Query: 3294 ACFSVFNELRSDPNLVATLYQWLVTPVQPQ 3383
            ACFS+ NELRSDP LV TL+QWLV PVQPQ
Sbjct: 1025 ACFSILNELRSDPFLVDTLHQWLVLPVQPQ 1054



 Score =  318 bits (815), Expect(2) = 0.0
 Identities = 169/403 (41%), Positives = 228/403 (56%), Gaps = 8/403 (1%)
 Frame = +1

Query: 325  QLTYEPHKPTMLPDHSYKELGAAILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAKS 504
            QL Y+     ML D S +++   +  + Y + R   L A     +  + G        +S
Sbjct: 54   QLIYDCPPQKMLRDFSSRDITQELWGRGYNETRRAFLEAMQNLQNLLMSGVRQFRAGLES 113

Query: 505  TLDFVLTSIVYYWAFTLWLLICTIWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGWP 684
             L  +  +I Y W+  +W   C  W    EYT+               VK   WIFG  P
Sbjct: 114  LLHVIFQAIAYLWSSLIWATACATWYLFREYTIEMLTLASLYMSTVYMVKMAAWIFGDLP 173

Query: 685  IYLI-AGLSAILKFIFRNPLSKTPYKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHAG 861
            I+L+ AGLS  ++ I +    +  Y  EK+V+GF +F+I Q PP++ VL+I + D SHAG
Sbjct: 174  IFLLKAGLST-MRGISKALWFRRSYNAEKSVEGFLSFKIPQSPPKHSVLQIQYKDGSHAG 232

Query: 862  YATCISLFDGTTGLLTAYHLVNEGSQVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPPN 1041
            YATC+ L++GT GLLTAYH+   GS++VST NGN IPL  F +I  S+ RD VL+ GPPN
Sbjct: 233  YATCVKLYNGTNGLLTAYHVAVPGSKIVSTRNGNKIPLSEFRSIMESEKRDLVLLAGPPN 292

Query: 1042 WTGLLACKSAHFTPATQLAKSNATIFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCGH 1221
            W G LACK+ HF  A  L KS AT +    + W ++NA I G+       SVLSNTD GH
Sbjct: 293  WEGTLACKAVHFQDAQSLCKSKATFYAYDGEEWTSSNADIVGIAQGKTHASVLSNTDAGH 352

Query: 1222 SGAPYFNGKTVLGVHVGGGKNENCNYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVEA 1401
            SG PYFNG TVLGVHVGG K EN NYM+ IP + G TSP Y FE++AP G++F+ EE++ 
Sbjct: 353  SGTPYFNGVTVLGVHVGGAKEENANYMAPIPGIYGITSPSYEFESSAPQGRLFSQEEIDD 412

Query: 1402 LLEDFGLEEI-------RWMAKNKSERQRLKLNDVMEEEYTYE 1509
            L+E+F   EI       RW   + S+R         + +Y YE
Sbjct: 413  LIEEFSFSEITSIMGHRRWHQMHDSQRH--------QADYKYE 447


>gb|AFK28058.1| replicase fusion protein [Cucurbit aphid-borne yellows virus]
          Length = 1055

 Score =  782 bits (2019), Expect(2) = 0.0
 Identities = 392/625 (62%), Positives = 461/625 (73%), Gaps = 2/625 (0%)
 Frame = +3

Query: 1515 GGRKSGTDHRKNRTGNGYHRAKRQGEDWAR--RNTSRCCSFYTEGTLGPRCHPSHTHDPD 1688
            G R  G   R NRT     R    G  WA+  R T  CCS   EG         H H  +
Sbjct: 448  GKRAGGRVRRNNRT-----RCHPSG--WAQKWRRTVSCCSLLPEG--------QHVHTSE 492

Query: 1689 NYYAPRCHCTIPGHACFYRKYLGHGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENAQTE 1868
                P C+C+IP H CFYR ++G+ +  +G +  P+   E  G   G    +  E AQT 
Sbjct: 493  QTGEPHCYCSIPHHQCFYRHFVGNQTGNNGQNRCPFD-REASGPSLGRQSHEETEVAQTR 551

Query: 1869 AKTWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGRQLIR 2048
             + +     DF+ +F + Y W   GEE   APGF +VG LP+FYH +QK  +NWG ++ +
Sbjct: 552  QEKFEELTTDFSSFFDAQYTWEQGGEE---APGFDKVGFLPQFYHAKQKKSSNWGDKICK 608

Query: 2049 DHPELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTVEAYQ 2228
             HPE+ + T GFGWP+FGA+AEL SLRLQA+RWLERA+ VKIPSSE+RE VI +   AYQ
Sbjct: 609  QHPEMGDLTKGFGWPQFGAKAELKSLRLQAARWLERAQSVKIPSSEEREHVIERCCRAYQ 668

Query: 2229 NVKTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDPKLLP 2408
              +TNGP ATR  +L W NFL+DFKQAV SLE+DAG+GVPYIAYG P HR WVED KLLP
Sbjct: 669  AARTNGPMATRGDRLSWDNFLQDFKQAVLSLEMDAGIGVPYIAYGKPTHRGWVEDKKLLP 728

Query: 2409 VLAQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRLIMSV 2588
            +LA+ TF RLQKMLEV    +S  ELV+ G+CDPIR+FVKGEPHK +KL EGRYRLIMSV
Sbjct: 729  ILARLTFNRLQKMLEVRYVDLSPAELVREGLCDPIRVFVKGEPHKQSKLDEGRYRLIMSV 788

Query: 2589 SLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTREIIG 2768
            SLVDQLVARVLFQNQNKREIALWR +PSKPGFGLSTD+QV EF+ +LSAQ G+   E+I 
Sbjct: 789  SLVDQLVARVLFQNQNKREIALWRVVPSKPGFGLSTDEQVAEFMQILSAQAGLTPSELIT 848

Query: 2769 NWPSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSVLCLS 2948
             W +++I TDCSGFDWSVSDWLL DDMEVRNRLT+DLNE T RLRA+WL CISNSVLCLS
Sbjct: 849  EWRAHMIATDCSGFDWSVSDWLLEDDMEVRNRLTLDLNETTRRLRAAWLHCISNSVLCLS 908

Query: 2949 DGRLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLSKYSS 3128
            DG LL+QRVPGVQK           RIRVMAAYHCGA+WA+AMGDDALES  ++L +Y S
Sbjct: 909  DGTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAYHCGAEWAMAMGDDALESACSNLERYKS 968

Query: 3129 LGFKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAACFSV 3308
            LGFKVE S +LEFCSHIF+ E+LAIPVNKAKMLYKLIHGYEP CGN+EVL+NYLAACFS+
Sbjct: 969  LGFKVEESSKLEFCSHIFEREDLAIPVNKAKMLYKLIHGYEPECGNVEVLINYLAACFSI 1028

Query: 3309 FNELRSDPNLVATLYQWLVTPVQPQ 3383
             NELRSDP+LV TL+QWLV PVQPQ
Sbjct: 1029 LNELRSDPSLVETLHQWLVAPVQPQ 1053



 Score =  323 bits (827), Expect(2) = 0.0
 Identities = 166/403 (41%), Positives = 230/403 (57%), Gaps = 1/403 (0%)
 Frame = +1

Query: 325  QLTYEPHKPTMLPDHSYKELGAAILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAKS 504
            QL Y+     ML D S  ++   +  + Y + R     A     +  + G        +S
Sbjct: 53   QLIYDCPPQKMLRDFSSHDITLELWERGYNETRQAFSEAMQNLQNLLMSGVRQFRTGLES 112

Query: 505  TLDFVLTSIVYYWAFTLWLLICTIWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGWP 684
             L  +L +  Y W   +W   C  W  +++YT+               VK   WIFG  P
Sbjct: 113  LLHVILQTAAYLWTSLIWATACATWYLLSKYTIEMLTLASLYISTVYMVKMAAWIFGDLP 172

Query: 685  IYLIAGLSAILKFIFRNPLSKTPYKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHAGY 864
            I L+    ++++ I R    +  Y  EK+V+G+ +F+I Q PP+N VL++ + D SHAGY
Sbjct: 173  ISLLKAGLSMVRGISRVLWYRKSYNAEKSVEGYLSFKIPQNPPKNSVLQVQYKDGSHAGY 232

Query: 865  ATCISLFDGTTGLLTAYHLVNEGSQVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPPNW 1044
            ATC++L++GT GLLTAYH+   GS+VVST NG+ IPL  F +I  S+ RD VL+ GPPNW
Sbjct: 233  ATCVTLYNGTNGLLTAYHVAVPGSKVVSTRNGSKIPLSEFRSIMESEKRDLVLLAGPPNW 292

Query: 1045 TGLLACKSAHFTPATQLAKSNATIFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCGHS 1224
             G LACK+  F  A  L KS A+ +    +GW+++NA+I G+       SVLSNTD GHS
Sbjct: 293  EGTLACKAVQFQSAQNLCKSKASFYAYDGEGWISSNAEIVGIAEGKTHASVLSNTDAGHS 352

Query: 1225 GAPYFNGKTVLGVHVGGGKNENCNYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVEAL 1404
            G PYFNG+TVLGVHVGG K+EN NYM+ IPP+ G TSP Y FETTAP G++FT EE+E L
Sbjct: 353  GTPYFNGRTVLGVHVGGAKDENFNYMAPIPPVYGLTSPAYEFETTAPQGRLFTQEEIEEL 412

Query: 1405 LEDFGLEEI-RWMAKNKSERQRLKLNDVMEEEYTYEMQGEGKV 1530
            +E+F   EI   M   +  +         E EY +  +  G+V
Sbjct: 413  IEEFSFSEITSIMGHRRFHQMHDSQRHQAEYEYEFGKRAGGRV 455


>gb|AFK28046.1| replicase fusion protein [Cucurbit aphid-borne yellows virus]
          Length = 1055

 Score =  780 bits (2014), Expect(2) = 0.0
 Identities = 391/625 (62%), Positives = 462/625 (73%), Gaps = 2/625 (0%)
 Frame = +3

Query: 1515 GGRKSGTDHRKNRTGNGYHRAKRQGEDWAR--RNTSRCCSFYTEGTLGPRCHPSHTHDPD 1688
            G R  G   R NRT     R    G  WA+  R T  CCS   EG         H H  +
Sbjct: 448  GKRAGGRVRRNNRT-----RCHPSG--WAQKWRRTVSCCSLLPEG--------QHVHTSE 492

Query: 1689 NYYAPRCHCTIPGHACFYRKYLGHGSEGDGGHTWPYQPEEHRGSGCGAAVEDGPENAQTE 1868
                P C+C+IP H CFYR ++G+ +  +G +  P+   E  G   G    +  E AQT 
Sbjct: 493  QTGEPHCYCSIPHHQCFYRHFVGNQTGNNGQNRCPFD-REASGPSLGRQSHEETEVAQTR 551

Query: 1869 AKTWAAKAEDFNKYFASYYQWGLEGEETPIAPGFQQVGILPKFYHPRQKGEANWGRQLIR 2048
             + +   A DF+ +F + Y W   GEE   APGF +VG LP+FYH +QK  +NWG ++ +
Sbjct: 552  QEKFEELATDFSSFFDAQYTWEQGGEE---APGFDKVGFLPQFYHAKQKKSSNWGDKICK 608

Query: 2049 DHPELEEQTAGFGWPKFGAEAELNSLRLQASRWLERAKLVKIPSSEDRERVIGKTVEAYQ 2228
             HPE+ + T GFGWP+FGA+AEL SLRLQA+RWLERA+ VKIPSSE+RE VI +   AYQ
Sbjct: 609  QHPEMGDLTKGFGWPQFGAKAELKSLRLQAARWLERAQSVKIPSSEEREHVIERCCRAYQ 668

Query: 2229 NVKTNGPTATRSGQLEWKNFLEDFKQAVFSLELDAGVGVPYIAYGLPKHRAWVEDPKLLP 2408
              +TNGP A R  +L W NFL+DFKQAV SLE+DAG+GVPYIAYG P HR WVED KLLP
Sbjct: 669  AARTNGPMAMRGDRLSWDNFLQDFKQAVLSLEMDAGIGVPYIAYGKPTHRGWVEDKKLLP 728

Query: 2409 VLAQFTFIRLQKMLEVNVDGMSAEELVQRGICDPIRLFVKGEPHKTAKLIEGRYRLIMSV 2588
            +LA+ TF RLQKMLEV    +S  ELV+ G+CDPIR+FVKGEPHK +KL EGRYRLIMSV
Sbjct: 729  ILARLTFNRLQKMLEVRYVDLSPAELVREGLCDPIRVFVKGEPHKQSKLDEGRYRLIMSV 788

Query: 2589 SLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDDQVVEFVNLLSAQVGVPTREIIG 2768
            SLVDQLVARVLFQNQNKREIALWR +PSKPGFGLSTD+QV EF+ +LSAQVG+   ++I 
Sbjct: 789  SLVDQLVARVLFQNQNKREIALWRVVPSKPGFGLSTDEQVAEFMQILSAQVGLTLSDLIT 848

Query: 2769 NWPSYLIPTDCSGFDWSVSDWLLADDMEVRNRLTVDLNEATIRLRASWLKCISNSVLCLS 2948
             W +++I TDCSGFDWSVSDWLL DDMEVRNRLT+DLNE T RLRA+WL CISNSVLCLS
Sbjct: 849  EWRAHMIATDCSGFDWSVSDWLLEDDMEVRNRLTLDLNETTRRLRAAWLHCISNSVLCLS 908

Query: 2949 DGRLLSQRVPGVQKXXXXXXXXXXXRIRVMAAYHCGADWAIAMGDDALESVKTDLSKYSS 3128
            DG LL+QRVPGVQK           RIRVMAAYHCGA+WA+AMGDDALES  ++L +Y S
Sbjct: 909  DGTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAYHCGAEWAMAMGDDALESACSNLERYKS 968

Query: 3129 LGFKVEVSPELEFCSHIFKSENLAIPVNKAKMLYKLIHGYEPGCGNLEVLVNYLAACFSV 3308
            LGFKVE S +LEFCSHIF+ E+LAIPVNKAKML+KLIHGYEP CGN+EVL+NYLAACFS+
Sbjct: 969  LGFKVEESSKLEFCSHIFEREDLAIPVNKAKMLFKLIHGYEPECGNVEVLINYLAACFSI 1028

Query: 3309 FNELRSDPNLVATLYQWLVTPVQPQ 3383
             NELRSDP+LV TL+QWLV PVQPQ
Sbjct: 1029 LNELRSDPSLVETLHQWLVAPVQPQ 1053



 Score =  322 bits (824), Expect(2) = 0.0
 Identities = 165/403 (40%), Positives = 229/403 (56%), Gaps = 1/403 (0%)
 Frame = +1

Query: 325  QLTYEPHKPTMLPDHSYKELGAAILVKCYRDIRSISLMARDVSTSYFIRGASAAHNIAKS 504
            QL Y+     ML D S  ++   +  + Y + R     A     +  + G        +S
Sbjct: 53   QLIYDCPPQKMLRDFSSHDITLELWERGYNETRQAFSEAMQNLQNLLMSGVRQFRAGLES 112

Query: 505  TLDFVLTSIVYYWAFTLWLLICTIWKFITEYTMXXXXXXXXXXXXXXXVKAVVWIFGGWP 684
             L  +L +  Y W   +W   C  W  ++ YT+               VK   WIFG  P
Sbjct: 113  LLHVILQTAAYLWTSLIWATACATWYLLSRYTIEMLTLASLYISTVYMVKMAAWIFGDLP 172

Query: 685  IYLIAGLSAILKFIFRNPLSKTPYKHEKAVKGFSTFEIHQKPPRNCVLEIVHADKSHAGY 864
            I L+    ++++ + R    +  Y  EK+V+G+ +F+I Q PP+N VL++ + D SHAGY
Sbjct: 173  ISLLKAGLSMVRGVSRALWYRKSYNAEKSVEGYLSFKIPQNPPKNSVLQVQYKDGSHAGY 232

Query: 865  ATCISLFDGTTGLLTAYHLVNEGSQVVSTHNGNSIPLDAFTTIYSSKARDQVLMHGPPNW 1044
            ATC++L++GT GLLTAYH+   GS+VVST NG+ IPL  F +I  S+ RD VL+ GPPNW
Sbjct: 233  ATCVTLYNGTNGLLTAYHVAVPGSKVVSTRNGSKIPLSEFRSIMESEKRDLVLLAGPPNW 292

Query: 1045 TGLLACKSAHFTPATQLAKSNATIFKLTNDGWVAANAKIEGVTATGNFVSVLSNTDCGHS 1224
             G LACK+  F  A  L KS A+ +    +GW+++NA+I G+       SVLSNTD GHS
Sbjct: 293  EGTLACKAVQFQSAQNLCKSKASFYAYDGEGWISSNAEIVGIAEGKTHASVLSNTDAGHS 352

Query: 1225 GAPYFNGKTVLGVHVGGGKNENCNYMSAIPPLVGTTSPKYVFETTAPMGKVFTDEEVEAL 1404
            G PYFNG+TVLGVHVGG K+EN NYM+ IPP+ G TSP Y FETTAP G++FT EE+E L
Sbjct: 353  GTPYFNGRTVLGVHVGGAKDENFNYMAPIPPVYGLTSPAYEFETTAPQGRLFTQEEIEEL 412

Query: 1405 LEDFGLEEI-RWMAKNKSERQRLKLNDVMEEEYTYEMQGEGKV 1530
            +E+F   EI   M   +  +         E EY +  +  G+V
Sbjct: 413  IEEFSFSEITSIMGHRRFHQMHDSRRHQAEYEYEFGKRAGGRV 455