BLASTX nr result
ID: Akebia25_contig00009761
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00009761
(3384 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1390 0.0
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 1377 0.0
ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun... 1357 0.0
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun... 1353 0.0
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr... 1340 0.0
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras... 1340 0.0
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 1339 0.0
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras... 1339 0.0
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1337 0.0
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 1335 0.0
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1333 0.0
ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theob... 1327 0.0
ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m... 1326 0.0
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 1325 0.0
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 1325 0.0
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 1324 0.0
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 1324 0.0
gb|EYU28900.1| hypothetical protein MIMGU_mgv1a000798mg [Mimulus... 1322 0.0
ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [A... 1321 0.0
ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Popu... 1318 0.0
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 1390 bits (3599), Expect = 0.0
Identities = 689/921 (74%), Positives = 782/921 (84%), Gaps = 31/921 (3%)
Frame = -1
Query: 3384 QMGRRNFRYFRNPISF-------KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDK 3226
++GR F + P++F KG+AS AEA++S EED+S VDE+Q L+E+++K DK
Sbjct: 68 ELGRPGFGVTKTPVNFFGLFGYQKGYASAAEAIAS---EEDMSGVDEVQELVEEVNKGDK 124
Query: 3225 KFFELGQQKQQNLVGGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNL 3046
+KQ L+GG+ GK+++LR+RQ+K+ETEAW++AA+EY+ELL DMC+QKLAPNL
Sbjct: 125 L------EKQPKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEYRELLSDMCEQKLAPNL 178
Query: 3045 PYMKSLFLGWFGPFRDSITGEQEQFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMT 2866
PY+KSLFLGWF P RD I EQ+ ++GKNR YA YFDHLPADMMAVITMHKLMGLLMT
Sbjct: 179 PYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVITMHKLMGLLMT 238
Query: 2865 SDDHGMVRLVQASLEIGEAIEQEVRIYNFLKKSRSNTNKDNKNEGGESDAVAKEKEKLRK 2686
+ +G R+VQA+ IGEAIE EVRI F++K++ + N +GG S+ V KE+EKLRK
Sbjct: 239 GEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGG-SNPVTKEQEKLRK 297
Query: 2685 KVTNLVKKQKLQQVRHIVKGQDDLKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGP 2506
KV+ L+KKQKLQQVR IVK QDD KPWGQDA KVG RLIELL+ETAYIQPP DQL DGP
Sbjct: 298 KVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGP 357
Query: 2505 PDIRPAFRHSLKVVTKDTLKTNRRFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWT 2326
PDIRPAF H+LK V K+T K RR+GVIECDPLVR+GLEKTARH+VIPYMPMLVPP+NWT
Sbjct: 358 PDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWT 417
Query: 2325 RYDKGAHLFLPSRVMRTHGSRHQREAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVI 2146
YDKGA+LFLPS VMR HG+R QREAIKRAPRK LE FEALNTLGNTKWR+NKRV GVI
Sbjct: 418 GYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVI 477
Query: 2145 HKIWATGGRLADLVDREDVPLPVQPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELK 1966
+IWA+GGRLADLVDREDVPLP +PDTEDEAEIR WKWKV+++KKENSERHS+RCD+ELK
Sbjct: 478 DRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELK 537
Query: 1965 LAVAWKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWL 1786
LAVA KMKDEDGFFYPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGKSGLRWL
Sbjct: 538 LAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWL 597
Query: 1785 KIHMANLYAGGVDKLSYDGRIAFTENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACIN 1606
KIH+AN+YAGGVDKLSY+GR+AFTENHL+DIFDSAD+PLEGRRWWL AEDPFQCL CIN
Sbjct: 598 KIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCIN 657
Query: 1605 LSDALRSSSPETTISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIA 1426
LS+ALRSSSPETTISHMP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVYSGIA
Sbjct: 658 LSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA 717
Query: 1425 ARVLEIMRVDAEKDPVTYPDALHARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 1246
ARVL+IM+ DA+KDP T P+AL ARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL
Sbjct: 718 ARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 777
Query: 1245 KERGAIEDDSQLFQASNYAAKITLTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTP 1066
KER AI D+ ++F AS YAAK TLTAL EMF+AAR IMSWLGDCAKVIASEN V+W TP
Sbjct: 778 KERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTP 837
Query: 1065 LGLPVVQPYRVLGMHLIKTSLQILTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAI 886
LGLPVVQPYR LG HLIKTSLQ+L+L+RETDKVMV+RQ+TAFPPNFVHSLDGSHMMMTA+
Sbjct: 838 LGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAV 897
Query: 885 ACKKAGLNFAGV------------------------XXXTPILENLLESFQESFPKLTFP 778
AC+KAGLNFAGV PILENLLE FQ+SFP L FP
Sbjct: 898 ACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFP 957
Query: 777 PLPERGDFDLKEVLKSPYFFN 715
PLPERGDFDL+EVL+SPYFFN
Sbjct: 958 PLPERGDFDLREVLESPYFFN 978
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
protein product [Vitis vinifera]
Length = 1035
Score = 1377 bits (3565), Expect = 0.0
Identities = 688/920 (74%), Positives = 773/920 (84%), Gaps = 31/920 (3%)
Frame = -1
Query: 3381 MGRRNFRYFRNPISFKGF-----ASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFF 3217
+GR +F RN + F GF ASVAEAVSSTD EEDVS DEIQ LL +M KE+K+
Sbjct: 116 VGRPSFGCLRNQMGFSGFCPKSYASVAEAVSSTDVEEDVSASDEIQELLGEMKKEEKRQV 175
Query: 3216 ELGQQKQQNLVGGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 3037
++++ + GM G+Y LR+RQVKIETEAW+ AA+EYKELL DMC+QKLAPNLPYM
Sbjct: 176 NFKRREKLKMERGMEQGRYLRLRRRQVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYM 235
Query: 3036 KSLFLGWFGPFRDSITGEQEQFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDD 2857
KSLFLGWF P RD+I EQE R GKN+ YA YFD LPADMM+VITMHKL+GLLMT +
Sbjct: 236 KSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPYFDQLPADMMSVITMHKLVGLLMTGGE 295
Query: 2856 HGMVRLVQASLEIGEAIEQEVRIYNFLKKS-RSNTNKDNKNEGGESDAVAKEKEKLRKKV 2680
HG R+VQA+ IG+AIEQEVRI+NFL+K+ R KD EGG D V E+EKLRKKV
Sbjct: 296 HGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVGKDKNVEGGGFDPVIHEQEKLRKKV 355
Query: 2679 TNLVKKQKLQQVRHIVKGQDDLKPWGQDAQAKVGCRLIELLMETAYIQPPVD-QLADGPP 2503
TNL+KKQKL R IVKG D+ KPWG +A+AKVG RLIELLM+TAYIQPPVD QLAD PP
Sbjct: 356 TNLMKKQKLHAARQIVKGHDNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPP 415
Query: 2502 DIRPAFRHSLKVVTKDTLKTNRRFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTR 2323
DIRPAF H+ K V ++ K RRFGVIECDPLV++GLE+TARH+VIPY+PMLVPP+ WT
Sbjct: 416 DIRPAFVHTFKTVMREAKKIGRRFGVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTG 475
Query: 2322 YDKGAHLFLPSRVMRTHGSRHQREAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIH 2143
YDKGAHLFLPS VMRTHG+R QREA+KRAPR QLE VFEALNTLGNTKWR+NKR+F V+
Sbjct: 476 YDKGAHLFLPSYVMRTHGARQQREAVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVD 535
Query: 2142 KIWATGGRLADLVDREDVPLPVQPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKL 1963
+IWA GG LADLVDR DVPLP +PDTEDEA++R WKWKVK++KK NSERHS+RCD+ELKL
Sbjct: 536 RIWAGGGCLADLVDRNDVPLPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKL 595
Query: 1962 AVAWKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLK 1783
AVA KMKDEDGFFYPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPLG SGL WLK
Sbjct: 596 AVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLK 655
Query: 1782 IHMANLYAGGVDKLSYDGRIAFTENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINL 1603
IH+ANL+AGGVDKLS++GRI FTENHLDDIFDSAD+PLEG+RWWL AEDPFQ L ACINL
Sbjct: 656 IHLANLFAGGVDKLSHEGRITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINL 715
Query: 1602 SDALRSSSPETTISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAA 1423
S+ALRSSSPETTISH+P+HQDGSCNGLQHYAALGRD+LGA AVNLVAG+KPADVYSGIAA
Sbjct: 716 SEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAA 775
Query: 1422 RVLEIMRVDAEKDPVTYPDALHARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 1243
RVL+IM+ DAEKDP +PDAL AR+LI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK
Sbjct: 776 RVLDIMKRDAEKDPAIFPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 835
Query: 1242 ERGAIEDDSQLFQASNYAAKITLTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPL 1063
ER AI DD +LF A+ YAAKITLTAL EMFQAAR IMSWLGDCAK+IASENQ V+WTTPL
Sbjct: 836 ERNAIADDVELFGAACYAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPL 895
Query: 1062 GLPVVQPYRVLGMHLIKTSLQILTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIA 883
GLPVVQPYR LG HLIKTSLQ+LTL+RET+ +MV+RQ+TAFPPNFVHSLDGSHMMMTAIA
Sbjct: 896 GLPVVQPYRKLGRHLIKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIA 955
Query: 882 CKKAGLNFAGV------------------------XXXTPILENLLESFQESFPKLTFPP 775
CKKAGLNFAGV TPILENLLESFQ+SFP L FPP
Sbjct: 956 CKKAGLNFAGVHDSYWTHACDVDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFPP 1015
Query: 774 LPERGDFDLKEVLKSPYFFN 715
LPERGDFDL+EVL+SPYFFN
Sbjct: 1016 LPERGDFDLREVLESPYFFN 1035
>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
gi|462422319|gb|EMJ26582.1| hypothetical protein
PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 1357 bits (3511), Expect = 0.0
Identities = 668/913 (73%), Positives = 774/913 (84%), Gaps = 39/913 (4%)
Frame = -1
Query: 3336 KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNLVGGMGPGKYH 3157
KG+ASVAEA++STD EED S +EIQ +LE + +E+ E ++ + +V GMG GKY+
Sbjct: 95 KGYASVAEAIASTDGEEDSSGSEEIQEMLEDLIRENN-MVESHFKQPKRVVVGMGVGKYN 153
Query: 3156 LLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYMKSLFLGWFGPFRDSITGEQE 2977
LLRKRQ+K+ETEAW +AA+EY+ELL DMC+QKLAPNLPY+KSLFLGWF P RD+I +Q+
Sbjct: 154 LLRKRQIKLETEAWQEAAKEYQELLADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQD 213
Query: 2976 QFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDDH-GMVRLVQASLEIGEAIEQ 2800
++ +R ++A YFDHLPAD MAVITMHKLMGLLMT++ G VR+VQA+ IGEAIE
Sbjct: 214 SCKQPNSRQSHAPYFDHLPADKMAVITMHKLMGLLMTNNGGIGSVRVVQAACAIGEAIEH 273
Query: 2799 EVRIYNFLKKSRSNTNK-DNKNEGG-------------ESDAVAKEKEKLRKKVTNLVKK 2662
EVRI+ FL+K++ N D K E E + + KE+E+LRKKV L+K+
Sbjct: 274 EVRIHRFLEKTKKKKNTIDKKAEADSVPVTIEQEKLADEQEKLTKEQERLRKKVNKLIKR 333
Query: 2661 QKLQQVRHIVKGQDDLKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDIRPAFR 2482
QK+QQVR IVK Q+DLKPWGQ+A KVGCRLI+LLM+TAYIQPPVDQ+ DGPPDIRPAF
Sbjct: 334 QKMQQVRGIVKEQEDLKPWGQEAHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFV 393
Query: 2481 HSLKVVTKDTLKTNRRFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYDKGAHL 2302
H+LK +T+DT KT+RR+GVIECDP+VR+G+EKTARH+V+PYMPMLVPPINWT YD+GA+L
Sbjct: 394 HNLKTITRDTQKTSRRYGVIECDPIVRKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYL 453
Query: 2301 FLPSRVMRTHGSRHQREAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKIWATGG 2122
FLPS VMRTHG++ QRE +KR PRKQLE VFEAL+TLG+TKWRVNKRV GVI +IWA+GG
Sbjct: 454 FLPSYVMRTHGAKQQREVVKRTPRKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGG 513
Query: 2121 RLADLVDREDVPLPVQPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAVAWKMK 1942
RLADLVDREDVPLP +PDTEDEAEIR WKWK+K KKENSERHS+RCD+ELKLA + KMK
Sbjct: 514 RLADLVDREDVPLPEEPDTEDEAEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMK 573
Query: 1941 DEDGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHMANLY 1762
DE+GF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF+EGR LGKSGLRWLKIH+ANLY
Sbjct: 574 DEEGFYYPHNLDFRGRAYPMHPYLNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLY 633
Query: 1761 AGGVDKLSYDGRIAFTENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSDALRSS 1582
AGGVDKLS+D R AFTENH+D+IFDSAD+PLEGRRWWLGAEDPFQCL ACINL +ALRS
Sbjct: 634 AGGVDKLSFDDRAAFTENHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSP 693
Query: 1581 SPETTISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1402
SPETTIS+MP+HQDGSCNGLQHYAALGRDKLGAAAVNLV GDKPADVYSGIAARVL+IMR
Sbjct: 694 SPETTISYMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMR 753
Query: 1401 VDAEKDPVTYPDALHARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIED 1222
DAEKDP T P+ALHARLLI+QVDRKLVKQTVMTSVYGVTY+GARDQIKRRLKERG+I D
Sbjct: 754 NDAEKDPATNPNALHARLLINQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIAD 813
Query: 1221 DSQLFQASNYAAKITLTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGLPVVQP 1042
D+ LF A+ YAA+ TLTAL EMF+AAR IMSWLG+CAKVIASENQ V+W TPLGLPVVQP
Sbjct: 814 DTALFAAACYAARTTLTALGEMFEAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQP 873
Query: 1041 YRVLGMHLIKTSLQILTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACKKAGLN 862
YR LG HLIKTSLQ+LTL+RETDKVMV+RQ+TAFPPNFVHSLDGSHMMMTA+ACKKAGLN
Sbjct: 874 YRQLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLN 933
Query: 861 FAGV------------------------XXXTPILENLLESFQESFPKLTFPPLPERGDF 754
FAGV PILENLLE FQ+SFP LTFPPLP+RGDF
Sbjct: 934 FAGVHDSYWTHACDIDEMNRILREKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGDF 993
Query: 753 DLKEVLKSPYFFN 715
DL++VL+SPYFFN
Sbjct: 994 DLRDVLESPYFFN 1006
>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
gi|462411068|gb|EMJ16117.1| hypothetical protein
PRUPE_ppa000719mg [Prunus persica]
Length = 1024
Score = 1353 bits (3501), Expect = 0.0
Identities = 668/918 (72%), Positives = 767/918 (83%), Gaps = 29/918 (3%)
Frame = -1
Query: 3381 MGRRNFRYFRNPISF-----KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFF 3217
M + +F RNPI F KG+ASVAEAVSSTD EE+VSVVDE+Q LL++MS E+K+
Sbjct: 108 MCKPSFWSVRNPIWFNGFCPKGYASVAEAVSSTDVEEEVSVVDEVQELLQQMSIEEKREA 167
Query: 3216 ELGQQKQQNLVGGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 3037
+ Q+ +QN GMG GKYH+L++RQ+KIETEAW++AA+EY+EL+ DMC+QKLAPNLPYM
Sbjct: 168 QYKQRTRQNRARGMGQGKYHMLKRRQIKIETEAWERAAKEYRELMMDMCEQKLAPNLPYM 227
Query: 3036 KSLFLGWFGPFRDSITGEQEQFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDD 2857
KSLFLGWF P R++I EQ+ R+GKN+ YA Y D LPADMM+VITMHKLMGLLMT +
Sbjct: 228 KSLFLGWFEPLRNAIDKEQDLCRKGKNKTAYAPYIDQLPADMMSVITMHKLMGLLMTGGE 287
Query: 2856 HGMVRLVQASLEIGEAIEQEVRIYNFLKKSRSNTNKDNKNEGGESDAVAKEKEKLRKKVT 2677
HG R+V A+ IGEAIEQEVRI+ FL+ +R D E GESDA KE+EKL KKVT
Sbjct: 288 HGTCRVVAAACTIGEAIEQEVRIHKFLEMTRKK-KVDKDQENGESDAAKKEREKLNKKVT 346
Query: 2676 NLVKKQKLQQVRHIVKGQDDLKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDI 2497
NL+KKQKL+ VR IV D K W +A+AKVG RLIELL +TA+IQPP DQLADGPPDI
Sbjct: 347 NLMKKQKLKAVRGIVSKHDASKSWSLEARAKVGSRLIELLTQTAFIQPPADQLADGPPDI 406
Query: 2496 RPAFRHSLKVVTKDTLKTNRRFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYD 2317
RPAF H+ + V KD +RR+GVIECDPLV +GLEKTARH+VIPYMPMLVPP+NWT YD
Sbjct: 407 RPAFVHTFRTVAKDAKNASRRYGVIECDPLVLKGLEKTARHMVIPYMPMLVPPLNWTGYD 466
Query: 2316 KGAHLFLPSRVMRTHGSRHQREAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKI 2137
KG + FLPS VMR HG+R QREAIKR PR+QLE VF+AL+ LGNT+WRVNKRV V+ +I
Sbjct: 467 KGGYFFLPSYVMRIHGARQQREAIKRTPREQLEPVFKALDALGNTRWRVNKRVLSVVDRI 526
Query: 2136 WATGGRLADLVDREDVPLPVQPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAV 1957
WA+GG LADLVDR DVPLP +PDTEDE ++ WKWKVK++KKEN ERHS+RCD ELKLAV
Sbjct: 527 WASGGHLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVKKENMERHSQRCDTELKLAV 586
Query: 1956 AWKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH 1777
A KMKDE+GF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF EGRPLGKSGL WLKIH
Sbjct: 587 ARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFQEGRPLGKSGLSWLKIH 646
Query: 1776 MANLYAGGVDKLSYDGRIAFTENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSD 1597
+ANLYAGGVDKLS +GRIAFTENHLDDIFDS DKPLEGRRWWL AEDPFQCL CINL++
Sbjct: 647 LANLYAGGVDKLSLEGRIAFTENHLDDIFDSVDKPLEGRRWWLKAEDPFQCLAVCINLAE 706
Query: 1596 ALRSSSPETTISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARV 1417
ALRSSSPET ISH+P+HQDGSCNGLQHYAALGRDKLGAA+VNLV G+KPADVYSGIA RV
Sbjct: 707 ALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVTGEKPADVYSGIAVRV 766
Query: 1416 LEIMRVDAEKDPVTYPDALHARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 1237
LEIMR DA+KDPV +P+AL A+LLI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER
Sbjct: 767 LEIMRRDAQKDPVVFPEALRAKLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 826
Query: 1236 GAIEDDSQLFQASNYAAKITLTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGL 1057
G+I DD+++F + YAAKITLTAL EMF+AAR IMSWLG+CAK+IASENQ V+WTTPLGL
Sbjct: 827 GSISDDAEIFGCACYAAKITLTALGEMFEAARGIMSWLGECAKIIASENQPVRWTTPLGL 886
Query: 1056 PVVQPYRVLGMHLIKTSLQILTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACK 877
PVVQPYR G HLIKTSLQ+LTL+RET+KVMV+RQ+TAFPPNFVHSLD SHMMMTAIACK
Sbjct: 887 PVVQPYRKFGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDSSHMMMTAIACK 946
Query: 876 KAGLNFAGV------------------------XXXTPILENLLESFQESFPKLTFPPLP 769
KAGL+FAGV TPILENLLESFQ+SFP LTFPPLP
Sbjct: 947 KAGLSFAGVHDSYWTHACDVDEMNKILREKFVQLYETPILENLLESFQQSFPALTFPPLP 1006
Query: 768 ERGDFDLKEVLKSPYFFN 715
ERGDFDL++VL+SPYFFN
Sbjct: 1007 ERGDFDLRDVLESPYFFN 1024
>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533045|gb|ESR44228.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 1030
Score = 1340 bits (3469), Expect = 0.0
Identities = 661/918 (72%), Positives = 769/918 (83%), Gaps = 29/918 (3%)
Frame = -1
Query: 3381 MGRRNFRYFRNPISF--KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELG 3208
MGR +F +N + +G+A+VAEAVSSTD EEDVS+V+EIQ LL++M KE+++ E G
Sbjct: 113 MGRTSFGVLKNDNFWCPRGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEEQREGENG 172
Query: 3207 QQKQQNLVG-GMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYMKS 3031
+ + V GMG GKY +L+ RQVKIETEAW+QAA EY+ELL DMC+QKLAPNLPYMKS
Sbjct: 173 GGRNRRRVARGMGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKS 232
Query: 3030 LFLGWFGPFRDSITGEQEQFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDDHG 2851
LFLGWF P RD+I EQE+ R K++ YA YFD LPADMMAVITMHKLMGLLMT +HG
Sbjct: 233 LFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHG 292
Query: 2850 MVRLVQASLEIGEAIEQEVRIYNFLKKSRSNTNKDNKN--EGGESDAVAKEKEKLRKKVT 2677
R+VQA+ IG+AIEQEVRI+ FL+K++ NK EG ES+ V E+EKLRKKVT
Sbjct: 293 RARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVT 352
Query: 2676 NLVKKQKLQQVRHIVKGQDDLKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDI 2497
+L+KKQKL VR IVKGQDD KPWGQDA+AKVG R+IELL +TAYIQ P DQL D PPDI
Sbjct: 353 DLIKKQKLPAVRRIVKGQDDFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLVDAPPDI 412
Query: 2496 RPAFRHSLKVVTKDTLKTNRRFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYD 2317
PAF H+L+ V+K+T ++++GVIEC+PLV +GLE+TARH+VIPYMPMLVPP+ WT YD
Sbjct: 413 FPAFTHTLRTVSKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYD 472
Query: 2316 KGAHLFLPSRVMRTHGSRHQREAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKI 2137
KGAH FLPS VMRTHG++ QR+ +KR P+KQLE VFEAL+TLGNTKWRVN RV V+ +I
Sbjct: 473 KGAHFFLPSYVMRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRI 532
Query: 2136 WATGGRLADLVDREDVPLPVQPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAV 1957
W+ GGRLADLVDR DVPLP +P+TEDEA++R W+WKV+ +KKEN ERHS+RCD+ELKL+V
Sbjct: 533 WSCGGRLADLVDRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSV 592
Query: 1956 AWKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH 1777
A KMKDE+GF+YPHN+DFRGRAYPMHP+LNHLGSDLCRGILEFAEGR LGKSGL WLKIH
Sbjct: 593 ARKMKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRTLGKSGLHWLKIH 652
Query: 1776 MANLYAGGVDKLSYDGRIAFTENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSD 1597
+ANLYAGGVDKLS++GR+AFTENHLDDIFDSADKPLEGRRWWL AEDPFQCL CINL++
Sbjct: 653 LANLYAGGVDKLSHEGRLAFTENHLDDIFDSADKPLEGRRWWLKAEDPFQCLAVCINLTE 712
Query: 1596 ALRSSSPETTISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARV 1417
ALRSSSPET ISH+P+HQDGSCNGLQHYAALGRD LGAAAVNLVA +KPADVYSGIAARV
Sbjct: 713 ALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDTLGAAAVNLVAREKPADVYSGIAARV 772
Query: 1416 LEIMRVDAEKDPVTYPDALHARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 1237
L I+R DA++DP +PDAL A+LL+SQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER
Sbjct: 773 LVIIRRDAQRDPAVFPDALRAKLLLSQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 832
Query: 1236 GAIEDDSQLFQASNYAAKITLTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGL 1057
GA ++++LF AS YAAK+TLTAL EMFQAAR IMSWLG+CAK+IASENQ V+WTTPLGL
Sbjct: 833 GAPMEEAELFGASCYAAKVTLTALGEMFQAARGIMSWLGECAKIIASENQPVRWTTPLGL 892
Query: 1056 PVVQPYRVLGMHLIKTSLQILTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACK 877
PVVQPYR LG H +KTSLQILTL+RET+KVMV+RQ+TAFPPNFVHSLDGSHMMMTA+AC+
Sbjct: 893 PVVQPYRKLGRHTVKTSLQILTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACR 952
Query: 876 KAGLNFAGV------------------------XXXTPILENLLESFQESFPKLTFPPLP 769
KAGL FAGV PILENLL+SFQ+SFPKL PPLP
Sbjct: 953 KAGLTFAGVHDSYWTHACDVDEMNRILREKFVELYEMPILENLLDSFQKSFPKLVLPPLP 1012
Query: 768 ERGDFDLKEVLKSPYFFN 715
ERGDFDL+EVL SPYFFN
Sbjct: 1013 ERGDFDLREVLGSPYFFN 1030
>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial; AltName:
Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 2B; Flags: Precursor
gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
RNA polymerase [Nicotiana tabacum]
Length = 1021
Score = 1340 bits (3468), Expect = 0.0
Identities = 656/901 (72%), Positives = 766/901 (85%), Gaps = 27/901 (2%)
Frame = -1
Query: 3336 KGFASVAEAV--SSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNLVGGMGPGK 3163
K +ASVAEAV SSTD EEDVSVVDE+Q LL ++ KE+KK F ++KQ+ L GMG K
Sbjct: 123 KSYASVAEAVAVSSTDAEEDVSVVDEVQELLTELKKEEKKQFAFRRRKQRMLTSGMGHRK 182
Query: 3162 YHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYMKSLFLGWFGPFRDSITGE 2983
Y L++RQVK+ETEAW+QAA+EYKELL DMC+QKLAPNLPY+KSLFLGWF P RD I E
Sbjct: 183 YQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEE 242
Query: 2982 QEQFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDDHGMVRLVQASLEIGEAIE 2803
QE +GK++ YA+Y LPADMMAVITMHKLMGLLMT DHG R+VQA+L IG+AIE
Sbjct: 243 QELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIE 302
Query: 2802 QEVRIYNFLKKSRSN-TNKDNKNEGGESDAVAKEKEKLRKKVTNLVKKQKLQQVRHIVKG 2626
QEVRI+NFL+K++ KD + E GE V +E+EKLRKKVTNL+KKQKL+ V IV+
Sbjct: 303 QEVRIHNFLEKTKKQKAEKDKQKEDGEH--VTQEQEKLRKKVTNLMKKQKLRAVGQIVRR 360
Query: 2625 QDDLKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDIRPAFRHSLKVVTKDTLK 2446
QDD KPWGQDA+AKVG RLIELL++TAYIQPP +QLA PPDIRPAF HS++ V K+T
Sbjct: 361 QDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETKS 420
Query: 2445 TNRRFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYDKGAHLFLPSRVMRTHGS 2266
+RR+G+I+CD LV +GLE+TARH+VIPYMPMLVPP+ WT YDKG HL+LPS VMRTHG+
Sbjct: 421 ASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGA 480
Query: 2265 RHQREAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKIWATGGRLADLVDREDVP 2086
R QREA+KRA R QL+ VFEAL+TLG+TKWR+NKRV VI +IWA GGRLADLVDR+D P
Sbjct: 481 RQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDAP 540
Query: 2085 LPVQPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAVAWKMKDEDGFFYPHNLD 1906
LP +PDTEDEA W+WKVK++KKEN ERHS+RCD+ELKLAVA KMKDE+GFFYPHN+D
Sbjct: 541 LPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVD 600
Query: 1905 FRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHMANLYAGGVDKLSYDGR 1726
FRGRAYPMHPHLNHLGSD+CRG+L FAEGRPLG+SGLRWLKIH+ANL+AGGV+KLS +GR
Sbjct: 601 FRGRAYPMHPHLNHLGSDICRGVLVFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGR 660
Query: 1725 IAFTENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSDALRSSSPETTISHMPIH 1546
IAFTENH+DDIFDSADKPLEGRRWWL AEDPFQCL CINLS+A+RSSSPET+ISH+P+H
Sbjct: 661 IAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIPVH 720
Query: 1545 QDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMRVDAEKDPVTYPD 1366
QDGSCNGLQHYAALGRD+LGAAAVNLVAG+KPADVYSGIAARVL+IM+ DA++DP +PD
Sbjct: 721 QDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPD 780
Query: 1365 ALHARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDSQLFQASNYAA 1186
A+ AR L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI DDS+LF A+ YAA
Sbjct: 781 AVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAA 840
Query: 1185 KITLTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGLPVVQPYRVLGMHLIKTS 1006
K+TLTAL EMF+AAR IM+WLG+CAK+IASEN+ V+WTTPLGLPVVQPYR +G HLIKTS
Sbjct: 841 KVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTS 900
Query: 1005 LQILTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGV-------- 850
LQILTL++ET+KVMV+RQ+TAFPPNF+HSLDGSHMMMTA+AC++AGLNFAGV
Sbjct: 901 LQILTLQQETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHA 960
Query: 849 ----------------XXXTPILENLLESFQESFPKLTFPPLPERGDFDLKEVLKSPYFF 718
TPILE LLESFQ S+P L FPPLPERGDFDL++VL+SPYFF
Sbjct: 961 CDVDKLNRILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGDFDLRDVLESPYFF 1020
Query: 717 N 715
N
Sbjct: 1021 N 1021
>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Citrus sinensis]
Length = 1026
Score = 1339 bits (3465), Expect = 0.0
Identities = 659/917 (71%), Positives = 769/917 (83%), Gaps = 28/917 (3%)
Frame = -1
Query: 3381 MGRRNFRYFRNPISF--KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELG 3208
MGR +F +N + +G+A+VAEAVSSTD EEDVS+V+EIQ LL++M KE + G
Sbjct: 113 MGRTSFGVLKNDNFWCPRGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEQQSG---G 169
Query: 3207 QQKQQNLVGGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYMKSL 3028
+ ++ + GMG GKY +L+ RQVKIETEAW++AA EY+ELL DMC+QKLAPNLPYMKSL
Sbjct: 170 GRNRRRVARGMGSGKYRMLKMRQVKIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSL 229
Query: 3027 FLGWFGPFRDSITGEQEQFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDDHGM 2848
FLGWF P RD+I EQE+ R K++ YA YFD LPADMMAVITMHKLMGLLMT +HG
Sbjct: 230 FLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGR 289
Query: 2847 VRLVQASLEIGEAIEQEVRIYNFLKKSRSNTNKDNKN--EGGESDAVAKEKEKLRKKVTN 2674
R+VQA+ IG+AIEQEVRI+ FL+K++ NK EG ES+ V E+EKLRKKVT+
Sbjct: 290 ARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTD 349
Query: 2673 LVKKQKLQQVRHIVKGQDDLKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDIR 2494
L+KKQKL VR IVKGQDD KPWGQDA+AKVG R+IELL +TAYIQ P DQLAD PPDI
Sbjct: 350 LIKKQKLPAVRRIVKGQDDFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLADAPPDIF 409
Query: 2493 PAFRHSLKVVTKDTLKTNRRFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYDK 2314
PAF H+L+ V+K+T ++++GVIEC+PLV +GLE+TARH+VIPYMPMLVPP+ WT YDK
Sbjct: 410 PAFTHALRTVSKETKGGSKKYGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDK 469
Query: 2313 GAHLFLPSRVMRTHGSRHQREAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKIW 2134
GAH FLPS VMRTHG++ QR+ +KR P+KQLE VFEAL+TLGNTKWRVN RV V+ +IW
Sbjct: 470 GAHFFLPSYVMRTHGAKQQRDTVKRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIW 529
Query: 2133 ATGGRLADLVDREDVPLPVQPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAVA 1954
+ GGRLADLVDR DVPLP +P+TEDEA++R W+WKV+ +KKEN ERHS+RCD+ELKL+VA
Sbjct: 530 SCGGRLADLVDRNDVPLPEKPETEDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVA 589
Query: 1953 WKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHM 1774
KMKDE+GF+YPHN+DFRGRAYPMHP+LNHLGSDLCRGILEFAEGR LGKSGL WLKIH+
Sbjct: 590 RKMKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRTLGKSGLHWLKIHL 649
Query: 1773 ANLYAGGVDKLSYDGRIAFTENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSDA 1594
ANLYAGGVDKLS++GR+AFTENHLDDIFDSADKPLEGRRWWL AEDPFQCL CINL++A
Sbjct: 650 ANLYAGGVDKLSHEGRLAFTENHLDDIFDSADKPLEGRRWWLKAEDPFQCLAVCINLTEA 709
Query: 1593 LRSSSPETTISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVL 1414
LRSSSPET ISH+P+HQDGSCNGLQHYAALGRD LGAAAVNLVA +KPADVYSGIAARVL
Sbjct: 710 LRSSSPETFISHIPVHQDGSCNGLQHYAALGRDTLGAAAVNLVAREKPADVYSGIAARVL 769
Query: 1413 EIMRVDAEKDPVTYPDALHARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG 1234
I++ DA++DP +PDAL A+LL+SQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG
Sbjct: 770 VIIQRDAQRDPAVFPDALRAKLLLSQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG 829
Query: 1233 AIEDDSQLFQASNYAAKITLTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGLP 1054
A ++++LF AS YAAK+TLTAL EMFQAAR IMSWLG+CAK+IASENQ V+WTTPLGLP
Sbjct: 830 APMEEAELFGASCYAAKVTLTALGEMFQAARGIMSWLGECAKIIASENQPVRWTTPLGLP 889
Query: 1053 VVQPYRVLGMHLIKTSLQILTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACKK 874
VVQPYR LG H +KTSLQILTL+RET+KVMV+RQ+TAFPPNFVHSLDGSHMMMTA+AC+K
Sbjct: 890 VVQPYRKLGRHTVKTSLQILTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRK 949
Query: 873 AGLNFAGV------------------------XXXTPILENLLESFQESFPKLTFPPLPE 766
AGL FAGV PILENLL+SFQ+SFPKL FPPLPE
Sbjct: 950 AGLTFAGVHDSYWTHACDVDEMNRILREKFVELYEMPILENLLDSFQKSFPKLVFPPLPE 1009
Query: 765 RGDFDLKEVLKSPYFFN 715
RGDFDL+EVL SPYFFN
Sbjct: 1010 RGDFDLREVLGSPYFFN 1026
>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
AltName: Full=T7 bacteriophage-type single subunit RNA
polymerase 2; Flags: Precursor
gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 1339 bits (3465), Expect = 0.0
Identities = 652/901 (72%), Positives = 765/901 (84%), Gaps = 27/901 (2%)
Frame = -1
Query: 3336 KGFASVAEAV--SSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNLVGGMGPGK 3163
K +ASVAEAV SSTD EEDVSVVDE+ LL ++ KE+KK F ++KQ+ L GMG K
Sbjct: 122 KSYASVAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRK 181
Query: 3162 YHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYMKSLFLGWFGPFRDSITGE 2983
Y L++RQVK+ETEAW+QAA+EYKELL DMC+QKLAPNLPY+KSLFLGWF P RD I E
Sbjct: 182 YQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEE 241
Query: 2982 QEQFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDDHGMVRLVQASLEIGEAIE 2803
QE +GK++ YA+YF LPADMMAVITMHKLMGLLMT DHG R+VQA+L IG+AIE
Sbjct: 242 QELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIE 301
Query: 2802 QEVRIYNFLKKSRSN-TNKDNKNEGGESDAVAKEKEKLRKKVTNLVKKQKLQQVRHIVKG 2626
QEVRI+NFL+K++ KD + E GE V +E+EKLRKKVTNL+KKQKL+ V IV+
Sbjct: 302 QEVRIHNFLEKTKKQKAEKDKQKEDGEH--VTQEQEKLRKKVTNLMKKQKLRAVGQIVRR 359
Query: 2625 QDDLKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDIRPAFRHSLKVVTKDTLK 2446
QDD KPWGQDA+AKVG RLI+LL++TAYIQPP +QLA PPDIRPAF HS++ V K+T
Sbjct: 360 QDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRTVAKETKS 419
Query: 2445 TNRRFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYDKGAHLFLPSRVMRTHGS 2266
+RR+G+I+CD LV +GLE+TARH+VIPYMPMLVPP+ WT YDKG HL+LPS VMRTHG+
Sbjct: 420 ASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGA 479
Query: 2265 RHQREAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKIWATGGRLADLVDREDVP 2086
R QREA+KRA R QL+ VFEAL+TLGNTKWR+NKRV V+ +IWA GGRLADLVDR+D P
Sbjct: 480 RQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAP 539
Query: 2085 LPVQPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAVAWKMKDEDGFFYPHNLD 1906
LP +PDTEDEA W+WKVK++KKEN ERHS+RCD+ELKLAVA KMKDE+ FFYPHN+D
Sbjct: 540 LPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVD 599
Query: 1905 FRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHMANLYAGGVDKLSYDGR 1726
FRGRAYPMHPHLNHLGSD+CRG+LEFAEGRPLG+SGLRWLKIH+ANL+AGGV+KLS +GR
Sbjct: 600 FRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGR 659
Query: 1725 IAFTENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSDALRSSSPETTISHMPIH 1546
I FTENH+DDIFDS+DKPLEGRRWWL AEDPFQCL CINLS+A+RSSSPET++SH+P+H
Sbjct: 660 IGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVH 719
Query: 1545 QDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMRVDAEKDPVTYPD 1366
QDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVYSGIAARVL+IM+ DA++DP +PD
Sbjct: 720 QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPD 779
Query: 1365 ALHARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDSQLFQASNYAA 1186
A+ AR+L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI DDS+LF A+ YAA
Sbjct: 780 AVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAA 839
Query: 1185 KITLTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGLPVVQPYRVLGMHLIKTS 1006
K+TLTAL EMF+AAR IM+WLG+CAK+IASEN+ V+WTTPLGLPVVQPYR +G HLIKTS
Sbjct: 840 KVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTS 899
Query: 1005 LQILTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGV-------- 850
LQILTL+RET+KVMV+RQ+TAFPPNF+HSLDGSHMMMTA+AC++AGLNFAGV
Sbjct: 900 LQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHA 959
Query: 849 ----------------XXXTPILENLLESFQESFPKLTFPPLPERGDFDLKEVLKSPYFF 718
PILE LLESFQ S+P L FPPLPERGDFD+++VL+SPYFF
Sbjct: 960 CDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFF 1019
Query: 717 N 715
N
Sbjct: 1020 N 1020
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
tuberosum]
Length = 993
Score = 1337 bits (3461), Expect = 0.0
Identities = 658/898 (73%), Positives = 759/898 (84%), Gaps = 24/898 (2%)
Frame = -1
Query: 3336 KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNLVGGMGPGKYH 3157
+ + S AEA++ST E+ +DEIQ L+E+M+KE++ Q KQ VGGMG GKY+
Sbjct: 104 RSYGSAAEAIASTSEED----IDEIQELIEEMNKENEALKTNLQPKQPKTVGGMGIGKYN 159
Query: 3156 LLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYMKSLFLGWFGPFRDSITGEQE 2977
LLR+RQ+K+ETEAW+ AA+EY+ELL DMC+QKLAPNLPY+KSLFLGWF P RD+I EQ+
Sbjct: 160 LLRRRQIKVETEAWEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQK 219
Query: 2976 QFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDDHGMVRLVQASLEIGEAIEQE 2797
GKNRG YA +FD LPA+MMAVITMHKLMGLLMT G R+VQA+ IGEAIE E
Sbjct: 220 LCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHE 279
Query: 2796 VRIYNFLKKSRSNTNKDNKNEGGESDAVAKEKEKLRKKVTNLVKKQKLQQVRHIVKGQDD 2617
RI+ FL+K++ N + E + + KE+E+LRKKV L+KKQKLQQVR IVK QDD
Sbjct: 280 ARIHRFLEKTKKNALDGSLEE--TAGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDD 337
Query: 2616 LKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDIRPAFRHSLKVVTKDTLKTNR 2437
KPWGQD KVGC+LI++L+ETAYIQPP DQL D PPDIRPAF H+LK V +T+K +R
Sbjct: 338 EKPWGQDNLVKVGCKLIQILIETAYIQPPNDQLDDCPPDIRPAFMHTLKTV--ETVKGSR 395
Query: 2436 RFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYDKGAHLFLPSRVMRTHGSRHQ 2257
R+GVI+CDPLVR+GL+KTARH+VIPYMPMLVPP NW+ YD+GA+LFLPS +MRTHG++ Q
Sbjct: 396 RYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGAKQQ 455
Query: 2256 REAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKIWATGGRLADLVDREDVPLPV 2077
REA+KR P+KQLE VF+AL+TLGNTKWRVNKRV G++ +IWA+GGRLADLVDREDVPLP
Sbjct: 456 REAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDVPLPE 515
Query: 2076 QPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAVAWKMKDEDGFFYPHNLDFRG 1897
+PDTEDE EI+ WKWKVK KKEN ERHS+RCD+ELKLAVA KMKDE+GF+YPHNLDFRG
Sbjct: 516 EPDTEDEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRG 575
Query: 1896 RAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHMANLYAGGVDKLSYDGRIAF 1717
RAYPMHP+LNHLGSDLCRGILEF+EGRPLGKSGLRWLKIH+AN+Y GGVDKLSY+GR AF
Sbjct: 576 RAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRAAF 635
Query: 1716 TENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSDALRSSSPETTISHMPIHQDG 1537
+ENH++DIFDSAD+PLEGRRWWLGAEDPFQCL CIN+S+ALRS SPET+ISHMPIHQDG
Sbjct: 636 SENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCINISEALRSPSPETSISHMPIHQDG 695
Query: 1536 SCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMRVDAEKDPVTYPDALH 1357
SCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVL+IM+ DA+KDP T P+ +
Sbjct: 696 SCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMR 755
Query: 1356 ARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDSQLFQASNYAAKIT 1177
ARLLI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDD++LF A+ YAAK T
Sbjct: 756 ARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFSAACYAAKTT 815
Query: 1176 LTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGLPVVQPYRVLGMHLIKTSLQI 997
LTAL EMF+AAR IMSWLGDCAK+IA ENQ V+WTTPLGLPVVQPYR LG HLIKTSLQI
Sbjct: 816 LTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQI 875
Query: 996 LTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGV----------- 850
LTL+RETDKVMV+RQ+TAFPPNFVHSLDGSHMMMTAI CK+AGL+FAGV
Sbjct: 876 LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAITCKEAGLSFAGVHDSYWTHASDV 935
Query: 849 -------------XXXTPILENLLESFQESFPKLTFPPLPERGDFDLKEVLKSPYFFN 715
PILENLLESFQ+SFP L FPPLPERGDFDL+EVL+SPYFFN
Sbjct: 936 DQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993
>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris] gi|17221595|dbj|BAB78465.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 1335 bits (3454), Expect = 0.0
Identities = 649/901 (72%), Positives = 764/901 (84%), Gaps = 27/901 (2%)
Frame = -1
Query: 3336 KGFASVAEAV--SSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNLVGGMGPGK 3163
K +ASVAEAV SSTD EEDVSVVDE+ LL ++ KE+KK F ++KQ+ L GMG K
Sbjct: 122 KSYASVAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRK 181
Query: 3162 YHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYMKSLFLGWFGPFRDSITGE 2983
Y L++RQVK+ETEAW+QAA+EYKELL DMC+QKLAPNLPY+KSLFLGWF P RD I E
Sbjct: 182 YQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEE 241
Query: 2982 QEQFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDDHGMVRLVQASLEIGEAIE 2803
QE +GK++ YA+YF LPADMMAVITMHKLMGLLMT DHG R+VQA+L IG+AIE
Sbjct: 242 QELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIE 301
Query: 2802 QEVRIYNFLKKSRSN-TNKDNKNEGGESDAVAKEKEKLRKKVTNLVKKQKLQQVRHIVKG 2626
QEVRI+NFL+K++ KD + E GE V +E+EKLRKKVTNL+KKQKL+ V IV+
Sbjct: 302 QEVRIHNFLEKTKKQKAEKDKQKEDGEH--VTQEQEKLRKKVTNLMKKQKLRAVGQIVRR 359
Query: 2625 QDDLKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDIRPAFRHSLKVVTKDTLK 2446
QDD KPWGQDA+AKVG RLI+LL++TAYIQPP +QLA PPDI PAF HS++ V K+T
Sbjct: 360 QDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIPPAFVHSVRTVAKETKS 419
Query: 2445 TNRRFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYDKGAHLFLPSRVMRTHGS 2266
+RR+G+I+CD LV +GLE+TARH+VIPYMPMLVPP+ WT YDKG HL+LPS VMRTHG+
Sbjct: 420 ASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGA 479
Query: 2265 RHQREAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKIWATGGRLADLVDREDVP 2086
R QREA+KRA R QL+ VFEAL+TLGNTKWR+NKRV V+ +IWA GGRLADLVDR+D P
Sbjct: 480 RQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAP 539
Query: 2085 LPVQPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAVAWKMKDEDGFFYPHNLD 1906
LP +PDTEDEA + W+WKVK++KKEN ERHS+RCD+ELKLAVA KMKDE+ FFYPHN+D
Sbjct: 540 LPEEPDTEDEALLPKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVD 599
Query: 1905 FRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHMANLYAGGVDKLSYDGR 1726
FRGRAYPMHPHLNHLGSD+CRG+LEFAEGRPLG+SGLRWLKIH+ANL+AGGV+KLS +GR
Sbjct: 600 FRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGR 659
Query: 1725 IAFTENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSDALRSSSPETTISHMPIH 1546
I FTENH+DDIFDS+DKPLEGRRWWL AEDPFQCL CINLS+A+RSSSPET++SH+P+H
Sbjct: 660 IGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVH 719
Query: 1545 QDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMRVDAEKDPVTYPD 1366
QDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPA+ YSGIAARVL+IM+ DA++DP +PD
Sbjct: 720 QDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPAEAYSGIAARVLDIMKRDAQRDPAEFPD 779
Query: 1365 ALHARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDSQLFQASNYAA 1186
A+ AR+L++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI DDS+LF A+ YAA
Sbjct: 780 AVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAA 839
Query: 1185 KITLTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGLPVVQPYRVLGMHLIKTS 1006
K+TLTAL EMF+AAR IM+WLG+CAK+IASEN+ V+WTTPLGLPVVQPYR +G HLIKTS
Sbjct: 840 KVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTS 899
Query: 1005 LQILTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGV-------- 850
LQILTL+RET+KVMV+RQ+TAFPPNF+HSLDGSHMMMTA+AC++AGLNFAGV
Sbjct: 900 LQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHA 959
Query: 849 ----------------XXXTPILENLLESFQESFPKLTFPPLPERGDFDLKEVLKSPYFF 718
PILE LLESFQ S+P L FPPLPERGDFD+++VL+SPYFF
Sbjct: 960 CDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFF 1019
Query: 717 N 715
N
Sbjct: 1020 N 1020
>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
lycopersicum]
Length = 993
Score = 1333 bits (3450), Expect = 0.0
Identities = 657/898 (73%), Positives = 759/898 (84%), Gaps = 24/898 (2%)
Frame = -1
Query: 3336 KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNLVGGMGPGKYH 3157
+ + S AEA++ST E+ +DEIQ L+E+M+KE++ Q KQ VGGMG GKY+
Sbjct: 104 RSYGSAAEAIASTSEED----IDEIQELIEEMNKENEALKTNLQPKQPKTVGGMGIGKYN 159
Query: 3156 LLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYMKSLFLGWFGPFRDSITGEQE 2977
LLR+RQ+K+ETEAW+ AA+EY+ELL DMC+QKLAPNLPY+KSLFLGWF P +D+I EQ+
Sbjct: 160 LLRRRQIKVETEAWEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLKDAIAAEQK 219
Query: 2976 QFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDDHGMVRLVQASLEIGEAIEQE 2797
GKNRG YA +FD LPA+MMAVITMHKLMGLLMT G R+VQA+ IGEAIE E
Sbjct: 220 LCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHE 279
Query: 2796 VRIYNFLKKSRSNTNKDNKNEGGESDAVAKEKEKLRKKVTNLVKKQKLQQVRHIVKGQDD 2617
RI+ FL+K++ N + E + + KE+E+LRKKV L+KKQKLQQVR IVK QDD
Sbjct: 280 ARIHRFLEKTKKNALDGSLEE--TAGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDD 337
Query: 2616 LKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDIRPAFRHSLKVVTKDTLKTNR 2437
KPWGQD KVGCRLI++L+ETAYIQPP DQL D PPDIRPAF H+LK V DT+K +R
Sbjct: 338 EKPWGQDNLVKVGCRLIQILIETAYIQPPNDQLEDCPPDIRPAFMHTLKTV--DTVKGSR 395
Query: 2436 RFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYDKGAHLFLPSRVMRTHGSRHQ 2257
R+GVI+CDPLVR+GL+KTARH+VIPYMPMLVPP NW+ YD+GA+LFLPS +MRTHG++ Q
Sbjct: 396 RYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGAKQQ 455
Query: 2256 REAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKIWATGGRLADLVDREDVPLPV 2077
REA+KR P+KQLE VF+AL+TLGNTKWRVNKRV G++ +IWA+GGRLADLVDREDVPLP
Sbjct: 456 REAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDVPLPE 515
Query: 2076 QPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAVAWKMKDEDGFFYPHNLDFRG 1897
+PDTE+E EI+ WKWKVK KKEN ERHS+RCD+ELKLAVA KMKDE+GF+YPHNLDFRG
Sbjct: 516 EPDTENEEEIKKWKWKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRG 575
Query: 1896 RAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHMANLYAGGVDKLSYDGRIAF 1717
RAYPMHP+LNHLGSDLCRGILEF+EGRPLGKSGLRWLKIH+AN+Y GGVDKLS +GR AF
Sbjct: 576 RAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSCEGRAAF 635
Query: 1716 TENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSDALRSSSPETTISHMPIHQDG 1537
+ENH++DIFDSAD+PLEGRRWWLGAEDPFQCL CI++S+ALRS SPET+ISHMPIHQDG
Sbjct: 636 SENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCISISEALRSPSPETSISHMPIHQDG 695
Query: 1536 SCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMRVDAEKDPVTYPDALH 1357
SCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVL+IM+ DA+KDP T P+ +
Sbjct: 696 SCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMR 755
Query: 1356 ARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDSQLFQASNYAAKIT 1177
ARLLI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDD++LF A+ YAAK T
Sbjct: 756 ARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFAAACYAAKTT 815
Query: 1176 LTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGLPVVQPYRVLGMHLIKTSLQI 997
LTAL EMF+AAR IMSWLGDCAK+IA ENQ V+WTTPLGLPVVQPYR LG HLIKTSLQI
Sbjct: 816 LTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQI 875
Query: 996 LTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGV----------- 850
LTL+RETDKVMV+RQ+TAFPPNFVHSLDGSHMMMTAIACK+AGL+FAGV
Sbjct: 876 LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKEAGLSFAGVHDSYWTHASDV 935
Query: 849 -------------XXXTPILENLLESFQESFPKLTFPPLPERGDFDLKEVLKSPYFFN 715
PILENLLESFQ+SFP L FPPLPERGDFDL+EVL+SPYFFN
Sbjct: 936 DQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993
>ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|590698457|ref|XP_007045722.1| DNA-directed RNA
polymerase isoform 1 [Theobroma cacao]
gi|508709656|gb|EOY01553.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1|
DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
Length = 996
Score = 1327 bits (3434), Expect = 0.0
Identities = 663/907 (73%), Positives = 758/907 (83%), Gaps = 31/907 (3%)
Frame = -1
Query: 3342 SFKGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNLVGGMGPGK 3163
+ KG+AS AEAV ST EED+S +EI L+E M++E+KK L Q K+ + GMG K
Sbjct: 95 NLKGYASAAEAVIST--EEDMSGSEEIHELMEAMAREEKKMSFLVQPKK--VAEGMGVAK 150
Query: 3162 YHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYMKSLFLGWFGPFRDSITGE 2983
Y+ L+KRQ+KIETEAW++AA+EY+ELL DMC+ KLAPNLPY+KSLFLGWF P RDSI GE
Sbjct: 151 YNTLKKRQIKIETEAWEEAAKEYQELLMDMCEHKLAPNLPYIKSLFLGWFEPLRDSIVGE 210
Query: 2982 QEQFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSD-DHGMVRLVQASLEIGEAI 2806
QE + R ++A YF+ L ADMMAV+TMHKLMGLLMT+ G +R+VQA+ +IGEAI
Sbjct: 211 QELCKENC-RISHAAYFNELSADMMAVVTMHKLMGLLMTNTAGTGGIRVVQAACQIGEAI 269
Query: 2805 EQEVRIYNFLKKSRSNTNKDNKNEG------GESDAVAKEKEKLRKKVTNLVKKQKLQQV 2644
E E +I +FL K++ D K +G + + + K++EKLRKKVT L+KKQK+ QV
Sbjct: 270 EHEAKIQSFLGKTKKKKTTDKKPDGESEPVTNKQEKLVKDQEKLRKKVTQLLKKQKVHQV 329
Query: 2643 RHIVKGQDDLKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDIRPAFRHSLKVV 2464
R IVKG D K WGQ+A KVGCRLI+LL+E AYIQPPVDQL D PPDIRPAF HSLK +
Sbjct: 330 RKIVKGHDTSKSWGQEAHVKVGCRLIQLLIENAYIQPPVDQLGDCPPDIRPAFVHSLKTI 389
Query: 2463 TKDTLKTNRRFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYDKGAHLFLPSRV 2284
TKD K +RR+GVIECD LVR+GLEKTARH+VIPYMPMLVPP NWT YD+GA+LFLPS V
Sbjct: 390 TKDGNKGSRRYGVIECDLLVRKGLEKTARHMVIPYMPMLVPPQNWTGYDRGAYLFLPSYV 449
Query: 2283 MRTHGSRHQREAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKIWATGGRLADLV 2104
MRTHG++ QRE +KR PRKQLE +FEAL+TLGNTKWR+NKRV GV+ ++WA GGR+A LV
Sbjct: 450 MRTHGAKQQRETVKRTPRKQLEPIFEALDTLGNTKWRINKRVLGVVDRLWANGGRVASLV 509
Query: 2103 DREDVPLPVQPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAVAWKMKDEDGFF 1924
DREDVPLP +PDTEDEAEI+ WKWKVK K+N+ERHS RCDVELKLAVA KM+DEDGF+
Sbjct: 510 DREDVPLPEKPDTEDEAEIQKWKWKVKAANKQNNERHSLRCDVELKLAVARKMRDEDGFY 569
Query: 1923 YPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHMANLYAGGVDK 1744
YPHNLDFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIH+ANLYAGGVDK
Sbjct: 570 YPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 629
Query: 1743 LSYDGRIAFTENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSDALRSSSPETTI 1564
LSY+GRIAFTENHLDDIFDSAD+PLEGRRWWL AEDPFQCL ACINLS+ALRSSSPETTI
Sbjct: 630 LSYEGRIAFTENHLDDIFDSADRPLEGRRWWLSAEDPFQCLAACINLSEALRSSSPETTI 689
Query: 1563 SHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMRVDAEKD 1384
SHMP+HQDGSCNGLQHYAALGRDKLGAA+VNLVAG+KPADVYSGIAARV++IMR DAEKD
Sbjct: 690 SHMPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVVDIMRRDAEKD 749
Query: 1383 PVTYPDALHARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDSQLFQ 1204
P P ALHARLLI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER AI DD+++F
Sbjct: 750 PAINPHALHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADDTEMFV 809
Query: 1203 ASNYAAKITLTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGLPVVQPYRVLGM 1024
AS YAA+ TLTAL EMFQAAR IM+WLG+CAKVI+SENQ V+W TPLGLPVVQPYR LG
Sbjct: 810 ASCYAARTTLTALGEMFQAARSIMNWLGECAKVISSENQPVRWVTPLGLPVVQPYRQLGR 869
Query: 1023 HLIKTSLQILTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGV-- 850
HLIKTSLQ+LTL+RETDKVM +RQ+TAFPPNFVHSLDGSHMMMTA+ACKKAGLNFAGV
Sbjct: 870 HLIKTSLQVLTLQRETDKVMAKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD 929
Query: 849 ----------------------XXXTPILENLLESFQESFPKLTFPPLPERGDFDLKEVL 736
PILENLLESFQ+SFP L FPPLPERGDFDL+EVL
Sbjct: 930 SYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPSLNFPPLPERGDFDLREVL 989
Query: 735 KSPYFFN 715
+SPYFFN
Sbjct: 990 ESPYFFN 996
>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
DNA-directed RNA polymerase 2, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
Length = 997
Score = 1326 bits (3432), Expect = 0.0
Identities = 658/913 (72%), Positives = 757/913 (82%), Gaps = 38/913 (4%)
Frame = -1
Query: 3339 FKGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKF---FELGQQKQQN--LVGGM 3175
FKG+A+ A V ++ E D S DE+Q +E+++K KK F QQ+QQ + GM
Sbjct: 85 FKGYATAAAQVIASTDESDFSGCDELQEQIEEINKHHKKMDAHFRQQQQQQQRKKTIAGM 144
Query: 3174 GPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYMKSLFLGWFGPFRDS 2995
G GKY +L+KRQ+K+ETEAW++AAREY+ELL DMC+QKLAPNLPY+KSLFLGWF P RD+
Sbjct: 145 GIGKYTILKKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDA 204
Query: 2994 ITGEQEQFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDD-HGMVRLVQASLEI 2818
I EQE R N+ ++ YFD LPADMMAVITMHKLMGLLMT++ +G VR+VQA+ +
Sbjct: 205 IAKEQELSREKNNKLSHGPYFDALPADMMAVITMHKLMGLLMTTNGGNGSVRVVQAACAV 264
Query: 2817 GEAIEQEVRIYNFL------KKSRSNTNKDNKNEGGESDA--VAKEKEKLRKKVTNLVKK 2662
GEAIE E RI+ FL KKS N + K E SDA +AKE+EKLRKKVT L+KK
Sbjct: 265 GEAIEHEARIHRFLEKTKKKKKSTKNEEPEGKLEPVTSDAEKLAKEQEKLRKKVTELMKK 324
Query: 2661 QKLQQVRHIVKGQDDLKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDIRPAFR 2482
QK+QQVR + KG DD PWGQ+AQ KVGCRLI+LL+ETAYIQPPV+QL DG PDIRPAF
Sbjct: 325 QKVQQVRGLTKGHDDSMPWGQEAQVKVGCRLIQLLIETAYIQPPVNQLGDGLPDIRPAFM 384
Query: 2481 HSLKVVTKDTLKTNRRFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYDKGAHL 2302
H+LK V KDT KT+RR+GVIECDP+VR GLEK+ARH+VIPYMPMLVPP+NW YD+GA+L
Sbjct: 385 HTLKNVMKDTQKTSRRYGVIECDPIVRNGLEKSARHMVIPYMPMLVPPLNWEGYDQGAYL 444
Query: 2301 FLPSRVMRTHGSRHQREAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKIWATGG 2122
FLPS VMRTHG++ QR A+KR P KQLE V+EALNTLGNTKWR+NK++ V+ +IWA GG
Sbjct: 445 FLPSYVMRTHGAKQQRNAVKRTPWKQLEPVYEALNTLGNTKWRINKKILTVVDRIWANGG 504
Query: 2121 RLADLVDREDVPLPVQPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAVAWKMK 1942
RLA L+DRED PLP + +TEDE EI+ WKWKVK +KKENSERHS+RCD+ELKLAVA KMK
Sbjct: 505 RLAGLIDREDEPLPEELETEDENEIKKWKWKVKNVKKENSERHSQRCDIELKLAVARKMK 564
Query: 1941 DEDGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHMANLY 1762
DEDGF+YPHNLDFRGRAYPMHPHLNHLGSD+CRGILEFAEGRPLGKSG RWLKIH+AN+Y
Sbjct: 565 DEDGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILEFAEGRPLGKSGFRWLKIHLANVY 624
Query: 1761 AGGVDKLSYDGRIAFTENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSDALRSS 1582
AGGVDKLSY+GR+AFTENHLD IFDSAD+PLEGRRWWLGAEDPFQCL C NL++A RSS
Sbjct: 625 AGGVDKLSYEGRVAFTENHLDYIFDSADRPLEGRRWWLGAEDPFQCLATCFNLAEAFRSS 684
Query: 1581 SPETTISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMR 1402
SPETTISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLV+G+KPADVYSGIAARVL+IMR
Sbjct: 685 SPETTISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVSGEKPADVYSGIAARVLDIMR 744
Query: 1401 VDAEKDPVTYPDALHARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIED 1222
DAEKDP T P+ALHA+LLI++VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER A+ D
Sbjct: 745 TDAEKDPGTNPNALHAKLLINEVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAVAD 804
Query: 1221 DSQLFQASNYAAKITLTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGLPVVQP 1042
D L+ AS YAAK TL ALEEMF+ AR IM+WLG+CAKVIASENQ VQWTTPLGLPVVQP
Sbjct: 805 DPSLYAASCYAAKTTLMALEEMFEGARSIMAWLGECAKVIASENQPVQWTTPLGLPVVQP 864
Query: 1041 YRVLGMHLIKTSLQILTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACKKAGLN 862
YR LG HLIKTSLQ+L L++ETDK+MV+RQ+TAFPPNFVHSLDGSHMMMTA+ACK AGLN
Sbjct: 865 YRQLGRHLIKTSLQMLALQKETDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACKHAGLN 924
Query: 861 FAGV------------------------XXXTPILENLLESFQESFPKLTFPPLPERGDF 754
FAGV PILENLLE FQ+SFPKL FPPLP+RGDF
Sbjct: 925 FAGVHDSYWTHACDVDEMNRILRENFVELYEAPILENLLEGFQKSFPKLKFPPLPDRGDF 984
Query: 753 DLKEVLKSPYFFN 715
DL++VL+SPYFFN
Sbjct: 985 DLRDVLESPYFFN 997
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 1325 bits (3430), Expect = 0.0
Identities = 651/898 (72%), Positives = 755/898 (84%), Gaps = 24/898 (2%)
Frame = -1
Query: 3336 KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNLVGGMGPGKYH 3157
+ + S AEA++ST E+ +DEIQ L+E+M+KE++ Q KQ +GGMG GKY+
Sbjct: 112 RSYGSAAEAIASTSEED----IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYN 167
Query: 3156 LLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYMKSLFLGWFGPFRDSITGEQE 2977
LLR+RQ+K+ETEAW++AA+EY+ELL DMC+QKLAPNLPYMKSLFLGWF P RD+I EQ+
Sbjct: 168 LLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQK 227
Query: 2976 QFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDDHGMVRLVQASLEIGEAIEQE 2797
GKNRG YA +FD LPA+MMAVITMHKLMGLLMT G R+VQA+ IGEAIE E
Sbjct: 228 LCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHE 287
Query: 2796 VRIYNFLKKSRSNTNKDNKNEGGESDAVAKEKEKLRKKVTNLVKKQKLQQVRHIVKGQDD 2617
RI+ FL+K++ + E D + KE+E+LRKKV L+KKQKLQQVR IVK QDD
Sbjct: 288 ARIHRFLEKTKKSNALSGDLEDTPGD-IMKERERLRKKVKILMKKQKLQQVRKIVKQQDD 346
Query: 2616 LKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDIRPAFRHSLKVVTKDTLKTNR 2437
KPWGQD KVGCRLI++LMETAYIQPP DQL D PPDIRPAF H+LK V +T+K +R
Sbjct: 347 EKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV--ETMKGSR 404
Query: 2436 RFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYDKGAHLFLPSRVMRTHGSRHQ 2257
R+GVI+CDPLVR+GL+KTARH+VIPYMPMLVPP +W YDKGA+LFLPS +MRTHG++ Q
Sbjct: 405 RYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQ 464
Query: 2256 REAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKIWATGGRLADLVDREDVPLPV 2077
REA+KR P+KQLE VF+AL+TLGNTKWR+N++V G++ +IWA+GGRLADLVDREDVPLP
Sbjct: 465 REAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPE 524
Query: 2076 QPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAVAWKMKDEDGFFYPHNLDFRG 1897
+PD EDEA+IR WKWKVK +KKEN ERHS+RCD+ELKLAVA KMKDEDGF+YPHNLDFRG
Sbjct: 525 EPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRG 584
Query: 1896 RAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHMANLYAGGVDKLSYDGRIAF 1717
RAYPMHP+LNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH+AN+Y GGVDKLSY+GR+AF
Sbjct: 585 RAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAF 644
Query: 1716 TENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSDALRSSSPETTISHMPIHQDG 1537
+ENH++DIFDSA++PLEG+RWWLGAEDPFQCL CIN+++ALRS SPET IS+MPIHQDG
Sbjct: 645 SENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDG 704
Query: 1536 SCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMRVDAEKDPVTYPDALH 1357
SCNGLQHYAALGRD LGAAAVNLVAGDKPADVYSGIAARVL+IM+ DA KDP P+ +
Sbjct: 705 SCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMR 764
Query: 1356 ARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDSQLFQASNYAAKIT 1177
ARLLI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG IEDD++LF A+ YAAK T
Sbjct: 765 ARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTT 824
Query: 1176 LTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGLPVVQPYRVLGMHLIKTSLQI 997
LTAL EMF+AAR IMSWLGDCAK+IA EN V+WTTPLGLPVVQPYR LG HLIKTSLQI
Sbjct: 825 LTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQI 884
Query: 996 LTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGV----------- 850
LTL+RETDKVMV+RQ+TAFPPNFVHSLDGSHMMMTAIACK++GL+FAGV
Sbjct: 885 LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDV 944
Query: 849 -------------XXXTPILENLLESFQESFPKLTFPPLPERGDFDLKEVLKSPYFFN 715
PILENLLESFQ+SFP L FPPLPERGDFDL+EVL+SPYFFN
Sbjct: 945 DQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 1325 bits (3428), Expect = 0.0
Identities = 652/898 (72%), Positives = 753/898 (83%), Gaps = 24/898 (2%)
Frame = -1
Query: 3336 KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNLVGGMGPGKYH 3157
+ + S AEA+ ST E+ +DEIQ L+E+M KE++ Q KQ +GGMG GKY+
Sbjct: 112 RSYGSAAEAIVSTSEED----IDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYN 167
Query: 3156 LLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYMKSLFLGWFGPFRDSITGEQE 2977
LR+RQ+K+ETEAW++AA+EY+ELL DMC+QKLAPNLPYMKSLFLGWF P RD+I EQ+
Sbjct: 168 FLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQK 227
Query: 2976 QFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDDHGMVRLVQASLEIGEAIEQE 2797
GKNRG YA +FD LPA+MMAVITMHKLMGLLMT G R+VQA+ IGEAIE E
Sbjct: 228 LCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHE 287
Query: 2796 VRIYNFLKKSRSNTNKDNKNEGGESDAVAKEKEKLRKKVTNLVKKQKLQQVRHIVKGQDD 2617
RI+ FL+K++ + E D + KE+E+LRKKV L+KKQKL+QVR IVK QDD
Sbjct: 288 ARIHRFLEKTKKSNALSGDLEETPGDMM-KERERLRKKVKILMKKQKLRQVRKIVKQQDD 346
Query: 2616 LKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDIRPAFRHSLKVVTKDTLKTNR 2437
KPWGQD KVGCRLI++LMETAYIQPP DQL DGPPDIRPAF H+LK V +T+K +R
Sbjct: 347 EKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV--ETMKGSR 404
Query: 2436 RFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYDKGAHLFLPSRVMRTHGSRHQ 2257
R+GVI+CDPLVR+GL+KTARH+VIPYMPMLVPP +W YDKG +LFLPS +MRTHG++ Q
Sbjct: 405 RYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQ 464
Query: 2256 REAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKIWATGGRLADLVDREDVPLPV 2077
REA+KR P+KQLE VF+AL+TLGNTKWRVN++V G++++IWA+GGRLADLVDREDVPLP
Sbjct: 465 REAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVNRIWASGGRLADLVDREDVPLPE 524
Query: 2076 QPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAVAWKMKDEDGFFYPHNLDFRG 1897
PDTEDEAEIR WKWKVK +KKEN ERHS+RCD+ELKLAVA KMKDEDGF+YPHNLDFRG
Sbjct: 525 APDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRG 584
Query: 1896 RAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHMANLYAGGVDKLSYDGRIAF 1717
RAYPMHP+LNHLGSDLCRGILEFAEGRPLG SGLRWLKIH+AN+Y GGVDKLSY+GR+AF
Sbjct: 585 RAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAF 644
Query: 1716 TENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSDALRSSSPETTISHMPIHQDG 1537
+ENHL+DIFDSA++PLEG+RWWLGAEDPFQCL CIN+++ALRS SPET IS+MPIHQDG
Sbjct: 645 SENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDG 704
Query: 1536 SCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMRVDAEKDPVTYPDALH 1357
SCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVL+IM+ DA KDP P+ +
Sbjct: 705 SCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMR 764
Query: 1356 ARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDSQLFQASNYAAKIT 1177
ARLLI+QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKERG IEDD++LF A+ YAAK T
Sbjct: 765 ARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTT 824
Query: 1176 LTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGLPVVQPYRVLGMHLIKTSLQI 997
LTAL EMF+AAR IMSWLGDCAK+IA EN V+WTTPLGLPVVQPYR LG HLIKTSLQI
Sbjct: 825 LTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQI 884
Query: 996 LTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGV----------- 850
LTL+RETDKVMV+RQ+TAFPPNFVHSLDGSHMMMTAIACK++GL+FAGV
Sbjct: 885 LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDV 944
Query: 849 -------------XXXTPILENLLESFQESFPKLTFPPLPERGDFDLKEVLKSPYFFN 715
PILENLLESFQ+SFP L FPPLPERGDFDL+EVL+SPYFFN
Sbjct: 945 DQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 1; Flags: Precursor
gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
subunit RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 1324 bits (3427), Expect = 0.0
Identities = 650/898 (72%), Positives = 755/898 (84%), Gaps = 24/898 (2%)
Frame = -1
Query: 3336 KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNLVGGMGPGKYH 3157
+ + S AEA++ST E+ +DEIQ L+E+M+KE++ Q KQ +GGMG GKY+
Sbjct: 112 RSYGSAAEAIASTSEED----IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYN 167
Query: 3156 LLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYMKSLFLGWFGPFRDSITGEQE 2977
LLR+RQ+K+ETEAW++AA+EY+ELL DMC+QKLAPNLPYMKSLFLGWF P RD+I EQ+
Sbjct: 168 LLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQK 227
Query: 2976 QFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDDHGMVRLVQASLEIGEAIEQE 2797
GKNRG YA +FD LPA+MMAVITMHKLMGLLMT G R+VQA+ IGEAIE E
Sbjct: 228 LCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHE 287
Query: 2796 VRIYNFLKKSRSNTNKDNKNEGGESDAVAKEKEKLRKKVTNLVKKQKLQQVRHIVKGQDD 2617
RI+ FL+K++ + E D + KE+E++RKKV L+KKQKLQQVR IVK QDD
Sbjct: 288 ARIHRFLEKTKKSNALSGDLEDTPGD-IMKERERVRKKVKILMKKQKLQQVRKIVKQQDD 346
Query: 2616 LKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDIRPAFRHSLKVVTKDTLKTNR 2437
KPWGQD KVGCRLI++LMETAYIQPP DQL D PPDIRPAF H+LK V +T+K +R
Sbjct: 347 EKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV--ETMKGSR 404
Query: 2436 RFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYDKGAHLFLPSRVMRTHGSRHQ 2257
R+GVI+CDPLVR+GL+KTARH+VIPYMPMLVPP +W YDKGA+LFLPS +MRTHG++ Q
Sbjct: 405 RYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQ 464
Query: 2256 REAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKIWATGGRLADLVDREDVPLPV 2077
REA+KR P+KQLE VF+AL+TLGNTKWR+N++V G++ +IWA+GGRLADLVDREDVPLP
Sbjct: 465 REAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPE 524
Query: 2076 QPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAVAWKMKDEDGFFYPHNLDFRG 1897
+PD EDEA+IR WKWKVK +KKEN ERHS+RCD+ELKLAVA KMKDEDGF+YPHNLDFRG
Sbjct: 525 EPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRG 584
Query: 1896 RAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHMANLYAGGVDKLSYDGRIAF 1717
RAYPMHP+LNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH+AN+Y GGVDKLSY+GR+AF
Sbjct: 585 RAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAF 644
Query: 1716 TENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSDALRSSSPETTISHMPIHQDG 1537
+ENH++DIFDSA++PLEG+RWWLGAEDPFQCL CIN+++ALRS SPET IS+MPIHQDG
Sbjct: 645 SENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDG 704
Query: 1536 SCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMRVDAEKDPVTYPDALH 1357
SCNGLQHYAALGRD LGAAAVNLVAGDKPADVYSGIAARVL+IM+ DA KDP P+ +
Sbjct: 705 SCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMR 764
Query: 1356 ARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDSQLFQASNYAAKIT 1177
ARLLI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG IEDD++LF A+ YAAK T
Sbjct: 765 ARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTT 824
Query: 1176 LTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGLPVVQPYRVLGMHLIKTSLQI 997
LTAL EMF+AAR IMSWLGDCAK+IA EN V+WTTPLGLPVVQPYR LG HLIKTSLQI
Sbjct: 825 LTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQI 884
Query: 996 LTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGV----------- 850
LTL+RETDKVMV+RQ+TAFPPNFVHSLDGSHMMMTAIACK++GL+FAGV
Sbjct: 885 LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDV 944
Query: 849 -------------XXXTPILENLLESFQESFPKLTFPPLPERGDFDLKEVLKSPYFFN 715
PILENLLESFQ+SFP L FPPLPERGDFDL+EVL+SPYFFN
Sbjct: 945 DQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 1B; Flags: Precursor
Length = 1002
Score = 1324 bits (3426), Expect = 0.0
Identities = 652/898 (72%), Positives = 752/898 (83%), Gaps = 24/898 (2%)
Frame = -1
Query: 3336 KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNLVGGMGPGKYH 3157
+ + S AEA+ ST E+ +DEIQ L+E+M KE++ Q KQ +GGMG GKY+
Sbjct: 112 RSYGSAAEAIVSTSEED----IDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYN 167
Query: 3156 LLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYMKSLFLGWFGPFRDSITGEQE 2977
LR+RQ+K+ETEAW++AA+EY+ELL DMC+QKLAPNLPYMKSLFLGWF P RD+I EQ+
Sbjct: 168 FLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQK 227
Query: 2976 QFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDDHGMVRLVQASLEIGEAIEQE 2797
GKNRG YA +FD LPA+MMAVITMHKLMGLLMT G R+VQA+ IGEAIE E
Sbjct: 228 LCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHE 287
Query: 2796 VRIYNFLKKSRSNTNKDNKNEGGESDAVAKEKEKLRKKVTNLVKKQKLQQVRHIVKGQDD 2617
RI+ FL+K++ + E D + KE+E+LRKKV L+KKQKL+QVR IVK QDD
Sbjct: 288 ARIHRFLEKTKKSNALSGDLEETPGDMM-KERERLRKKVKILMKKQKLRQVRKIVKQQDD 346
Query: 2616 LKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDIRPAFRHSLKVVTKDTLKTNR 2437
KPWGQD KVGCRLI++LMETAYIQPP DQL DGPPDIRPAF H+LK V +T+K +R
Sbjct: 347 EKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV--ETMKGSR 404
Query: 2436 RFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYDKGAHLFLPSRVMRTHGSRHQ 2257
R+GVI+CDPLVR+GL+KTARH+VIPYMPMLVPP +W YDKG +LFLPS +MRTHG++ Q
Sbjct: 405 RYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQ 464
Query: 2256 REAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKIWATGGRLADLVDREDVPLPV 2077
REA+KR P+KQLE VF+AL+TLGNTKWRVN++V G++ +IWA+GGRLADLVDREDVPLP
Sbjct: 465 REAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPE 524
Query: 2076 QPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAVAWKMKDEDGFFYPHNLDFRG 1897
PDTEDEAEIR WKWKVK +KKEN ERHS+RCD+ELKLAVA KMKDEDGF+YPHNLDFRG
Sbjct: 525 APDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRG 584
Query: 1896 RAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHMANLYAGGVDKLSYDGRIAF 1717
RAYPMHP+LNHLGSDLCRGILEFAEGRPLG SGLRWLKIH+AN+Y GGVDKLSY+GR+AF
Sbjct: 585 RAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAF 644
Query: 1716 TENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSDALRSSSPETTISHMPIHQDG 1537
+ENHL+DIFDSA++PLEG+RWWLGAEDPFQCL CIN+++ALRS SPET IS+MPIHQDG
Sbjct: 645 SENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDG 704
Query: 1536 SCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMRVDAEKDPVTYPDALH 1357
SCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVL+IM+ DA KDP P+ +
Sbjct: 705 SCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMR 764
Query: 1356 ARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDSQLFQASNYAAKIT 1177
ARLLI+QVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKERG IEDD++LF A+ YAAK T
Sbjct: 765 ARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTT 824
Query: 1176 LTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGLPVVQPYRVLGMHLIKTSLQI 997
LTAL EMF+AAR IMSWLGDCAK+IA EN V+WTTPLGLPVVQPYR LG HLIKTSLQI
Sbjct: 825 LTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQI 884
Query: 996 LTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGV----------- 850
LTL+RETDKVMV+RQ+TAFPPNFVHSLDGSHMMMTAIACK++GL+FAGV
Sbjct: 885 LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDV 944
Query: 849 -------------XXXTPILENLLESFQESFPKLTFPPLPERGDFDLKEVLKSPYFFN 715
PILENLLESFQ+SFP L FPPLPERGDFDL+EVL+SPYFFN
Sbjct: 945 DQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>gb|EYU28900.1| hypothetical protein MIMGU_mgv1a000798mg [Mimulus guttatus]
Length = 983
Score = 1322 bits (3421), Expect = 0.0
Identities = 648/909 (71%), Positives = 765/909 (84%), Gaps = 25/909 (2%)
Frame = -1
Query: 3366 FRYFRNPISFKGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKE-DKKFFELGQQKQQN 3190
FR+F S +G+A+ AEA+ ST EE VDE+Q L+E+++KE + K + +QKQ
Sbjct: 85 FRFFG---STRGYAAAAEALVSTSEEE----VDELQELIEEINKEINVKSTDNREQKQPK 137
Query: 3189 LVGGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYMKSLFLGWFG 3010
LVGGMG GKY+ LR+RQ+KIETEAW+ AA+EY+ELLEDMC+QKLAPNLPY+KSLFLGWF
Sbjct: 138 LVGGMGLGKYNSLRRRQIKIETEAWENAAKEYQELLEDMCEQKLAPNLPYIKSLFLGWFE 197
Query: 3009 PFRDSITGEQEQFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDDHGMVRLVQA 2830
P RD+I EQ+ + GKNRG YA YFD LPA+MMAVITMHKLMGLLMT +G R+VQA
Sbjct: 198 PLRDAIAAEQDLCKEGKNRGAYAPYFDQLPAEMMAVITMHKLMGLLMTGGGNGSARVVQA 257
Query: 2829 SLEIGEAIEQEVRIYNFLKKSRSNTNKDNKNEGGESDAVAKEKEKLRKKVTNLVKKQKLQ 2650
+ IGEAIE EVRI+ FL + + +E G D AKE+++LRKKV L+KKQK+Q
Sbjct: 258 ACHIGEAIEHEVRIHKFLDNCKRKNALNRTSEEGP-DPEAKEQDRLRKKVKILMKKQKVQ 316
Query: 2649 QVRHIVKGQDDLKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDIRPAFRHSLK 2470
QVR+IV+ QDDLKPWGQDAQ KVGCRLI++L +TAYIQPPVDQ DG PDIRPAF H+LK
Sbjct: 317 QVRNIVRHQDDLKPWGQDAQVKVGCRLIQILTQTAYIQPPVDQRDDGAPDIRPAFVHTLK 376
Query: 2469 VVTKDTLKTNRRFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYDKGAHLFLPS 2290
V +TLK +RR+GVIECDPLVR+G+EKTARH+VIPYMPMLVPP+NWT Y++GA+LFLPS
Sbjct: 377 CV--ETLKGSRRYGVIECDPLVRKGMEKTARHMVIPYMPMLVPPLNWTGYERGAYLFLPS 434
Query: 2289 RVMRTHGSRHQREAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKIWATGGRLAD 2110
+MRTHG++ QREA+KR P+++LE +F+ALNTLGNTKWRVNKR+ V+ +IWA GGRLAD
Sbjct: 435 YMMRTHGAKQQREAVKRTPKQELEPIFQALNTLGNTKWRVNKRILSVVDRIWANGGRLAD 494
Query: 2109 LVDREDVPLPVQPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAVAWKMKDEDG 1930
LVDRED+PLP +PDTEDEAEI+ WKWKVK +KK NSERHS+RCD+ELKLAVA K+K+E+G
Sbjct: 495 LVDREDLPLPEEPDTEDEAEIKKWKWKVKAVKKVNSERHSQRCDIELKLAVARKIKEEEG 554
Query: 1929 FFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHMANLYAGGV 1750
F+YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGKSGL+WLK+H+ANLY GGV
Sbjct: 555 FYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLQWLKVHLANLYGGGV 614
Query: 1749 DKLSYDGRIAFTENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSDALRSSSPET 1570
DK SYDGRI+FTENH++DIFDSAD+PLEG+RWWLGAEDPFQCL C++L++ALRS PE+
Sbjct: 615 DKFSYDGRISFTENHMEDIFDSADRPLEGKRWWLGAEDPFQCLATCMSLTEALRSPYPES 674
Query: 1569 TISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMRVDAE 1390
T+S++P+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVL+IM+ DA
Sbjct: 675 TVSYIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAA 734
Query: 1389 KDPVTYPDALHARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDDSQL 1210
KDP P+ + ARLLI+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER ++EDD++L
Sbjct: 735 KDPADDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERASMEDDTEL 794
Query: 1209 FQASNYAAKITLTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGLPVVQPYRVL 1030
F + YAAK TLTAL EMF+AAR IMSWLGDCAK+IA+EN V+WTTPLGLPVVQPYR L
Sbjct: 795 FACACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIATENHPVRWTTPLGLPVVQPYRKL 854
Query: 1029 GMHLIKTSLQILTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGV 850
G H+IKTSLQ+LTL+RETDKVM +RQ+TAFPPNFVHSLDGSHMMMTAIAC +AGL+FAGV
Sbjct: 855 GRHMIKTSLQVLTLQRETDKVMAKRQRTAFPPNFVHSLDGSHMMMTAIACSEAGLSFAGV 914
Query: 849 ------------------------XXXTPILENLLESFQESFPKLTFPPLPERGDFDLKE 742
PILENLL+ FQ+SFPKL FPPLPERGDFDL+E
Sbjct: 915 HDSYWTHACDVDKMNEILREKFVELYEAPILENLLDGFQQSFPKLKFPPLPERGDFDLRE 974
Query: 741 VLKSPYFFN 715
VL S YFFN
Sbjct: 975 VLDSTYFFN 983
>ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [Amborella trichopoda]
gi|548846502|gb|ERN05778.1| hypothetical protein
AMTR_s00006p00254180 [Amborella trichopoda]
Length = 1006
Score = 1321 bits (3420), Expect = 0.0
Identities = 663/917 (72%), Positives = 747/917 (81%), Gaps = 29/917 (3%)
Frame = -1
Query: 3378 GRRNFRYFRNPISFKGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKED-----KKFFE 3214
GRR+ +F S KGFA+ AEAV STD +ED S E L+ + + ++ E
Sbjct: 91 GRRD-PFFLRGCSLKGFANAAEAVVSTDIDEDCSSGSEETHLVLPTNGYNSNGAIREERE 149
Query: 3213 LGQQKQQNLVGGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYMK 3034
+ K G MG KY LR RQVKIETEAWDQAA+EY+EL+ DMC+ KLAPNLPYMK
Sbjct: 150 KLKPKNGYKDGVMGKAKYLALRTRQVKIETEAWDQAAKEYRELMMDMCEHKLAPNLPYMK 209
Query: 3033 SLFLGWFGPFRDSITGEQEQFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDDH 2854
SLFLGWF P RD I EQ ++ GKN+G YA YF LPADMM+VITMHKLMGLLMT D+
Sbjct: 210 SLFLGWFEPLRDIIASEQASYKAGKNKGAYAPYFMQLPADMMSVITMHKLMGLLMTGTDN 269
Query: 2853 GMVRLVQASLEIGEAIEQEVRIYNFLKKSRSNTNKDNKNEGGESDAVAKEKEKLRKKVTN 2674
G RLVQA+ +IGEAIEQEV+I+ F +K++ ++K+ K +G E + KEKE LRK+VTN
Sbjct: 270 GSTRLVQAACQIGEAIEQEVKIHRFFEKTKKKSDKEKKLDGEEPNEGDKEKESLRKRVTN 329
Query: 2673 LVKKQKLQQVRHIVKGQDDLKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDIR 2494
L+KKQKL QVR IVKGQDD KPWG D AKVG RLIELL+ETAY+QPPVDQ A+GPPDIR
Sbjct: 330 LMKKQKLHQVRKIVKGQDDAKPWGIDIHAKVGSRLIELLIETAYVQPPVDQSAEGPPDIR 389
Query: 2493 PAFRHSLKVVTKDTLKTNRRFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYDK 2314
PAFRH LK VTK+ K RR+GVIECDPL+ +GLEKTARH+VIPYMPMLVPP+ WT YD+
Sbjct: 390 PAFRHILKTVTKNDQKIRRRYGVIECDPLICKGLEKTARHMVIPYMPMLVPPVKWTGYDR 449
Query: 2313 GAHLFLPSRVMRTHGSRHQREAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKIW 2134
G HLFLPS VMR HG+R QR AIK APRKQL V+EAL+TLG TKWRVNKRV GVI +IW
Sbjct: 450 GGHLFLPSYVMRIHGARQQRYAIKHAPRKQLLKVYEALDTLGTTKWRVNKRVLGVIDRIW 509
Query: 2133 ATGGRLADLVDREDVPLPVQPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAVA 1954
A GGRLADLVDREDV +P +PDTEDEA+IR WKW VK +K+NSE HS+RCD ELKL VA
Sbjct: 510 ADGGRLADLVDREDVAIPEKPDTEDEAKIREWKWLVKGARKKNSELHSQRCDTELKLNVA 569
Query: 1953 WKMKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHM 1774
+MKDE+GF YPHNLDFRGRAYPMHP+LNHLGSDLCRGILEFAEGRPLGKSGLRWLKIH+
Sbjct: 570 RRMKDEEGFHYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHL 629
Query: 1773 ANLYAGGVDKLSYDGRIAFTENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSDA 1594
ANLYAGGVDKLSYDGR+ F ENHL+DIFDSAD+PLEG RWWLGAEDPFQCL AC+NLS+A
Sbjct: 630 ANLYAGGVDKLSYDGRLEFVENHLEDIFDSADRPLEGGRWWLGAEDPFQCLAACVNLSEA 689
Query: 1593 LRSSSPETTISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVL 1414
LRSSSP+TTISHMP+HQDGSCNGLQHYAALGRDKLGA AVNLVAG+KPADVYSGIA RVL
Sbjct: 690 LRSSSPDTTISHMPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYSGIAERVL 749
Query: 1413 EIMRVDAEKDPVTYPDALHARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG 1234
+IMR D++KDP + P+ A+LL++QVDRKLVKQTVMTSVYGVTY+GARDQI RRLKERG
Sbjct: 750 DIMRRDSQKDPTSDPNVARAKLLLNQVDRKLVKQTVMTSVYGVTYVGARDQIMRRLKERG 809
Query: 1233 AIEDDSQLFQASNYAAKITLTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGLP 1054
AI D+ +LF AS Y AK+TLTAL EMFQAAR IMSWLGDCAKVIASEN+ V+WTTPLGLP
Sbjct: 810 AITDEKELFSASCYTAKVTLTALGEMFQAARSIMSWLGDCAKVIASENETVRWTTPLGLP 869
Query: 1053 VVQPYRVLGMHLIKTSLQILTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACKK 874
VVQPYR LG HLIKTSLQ+L LR ETDKVMV+RQ+TAFPPNFVHSLDGSHMMMTAIACKK
Sbjct: 870 VVQPYRKLGRHLIKTSLQVLALRCETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKK 929
Query: 873 AGLNFAGV------------------------XXXTPILENLLESFQESFPKLTFPPLPE 766
AGLNFAGV TPILENLL +FQE FPKL+FPPLP
Sbjct: 930 AGLNFAGVHDSYWTHACDVDEMNRILREKFVELYSTPILENLLRNFQELFPKLSFPPLPA 989
Query: 765 RGDFDLKEVLKSPYFFN 715
RGDFDLKEVL SPYFFN
Sbjct: 990 RGDFDLKEVLDSPYFFN 1006
>ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa]
gi|550332836|gb|EEE88785.2| hypothetical protein
POPTR_0008s11200g [Populus trichocarpa]
Length = 988
Score = 1318 bits (3411), Expect = 0.0
Identities = 649/912 (71%), Positives = 761/912 (83%), Gaps = 33/912 (3%)
Frame = -1
Query: 3351 NPISFKGFASVAEA-VSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNLVGGM 3175
+P FKG+A+ A A V ++ E D+S D+ QGL+E+++K +K + +++ +V GM
Sbjct: 78 SPFFFKGYATAAAADVIPSNDESDLSGSDDFQGLMEQVNKHFQKMEPQFRPQEKKMVAGM 137
Query: 3174 GPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYMKSLFLGWFGPFRDS 2995
G GKY +L++RQ+K+ETEAW+QAA+EY+E+LEDMC+QKLAPNLPY+KSLFLGWF P RD+
Sbjct: 138 GIGKYAILKRRQIKMETEAWEQAAQEYQEMLEDMCEQKLAPNLPYVKSLFLGWFEPLRDA 197
Query: 2994 ITGEQEQFRRGKNRGNYARYFDHLPADMMAVITMHKLMGLLMTSDD-HGMVRLVQASLEI 2818
I EQE +R R ++ +F LPADMMAVITMHKLMGLLMT + +R+VQA+ +
Sbjct: 198 IVAEQELCKRNL-RVSHRAHFSDLPADMMAVITMHKLMGLLMTGNGGSASIRVVQAASVV 256
Query: 2817 GEAIEQEVRIYNFLKKSRSNTNKDNKNEGGESDA-------VAKEKEKLRKKVTNLVKKQ 2659
GEAIE E RI+ FL+K++ N + K GESDA ++KE+EKLRKKVT L+KKQ
Sbjct: 257 GEAIEHEGRIHKFLEKTKKRKNVEAKISEGESDAAIEEGEKLSKEQEKLRKKVTTLIKKQ 316
Query: 2658 KLQQVRHIVKGQDDLKPWGQDAQAKVGCRLIELLMETAYIQPPVDQLADGPPDIRPAFRH 2479
K+QQVR IVKG DD +PWGQ+ KVG RLI+L++ETAYIQPP+DQ+ DGPPDIRPAF H
Sbjct: 317 KVQQVRRIVKGHDDSRPWGQEEHVKVGSRLIQLMIETAYIQPPIDQIGDGPPDIRPAFVH 376
Query: 2478 SLKVVTKDTLKTNRRFGVIECDPLVRQGLEKTARHVVIPYMPMLVPPINWTRYDKGAHLF 2299
+LK +TKDT K++RR+GVIECDPLVR+GLEK+ARH+VIPYMPMLVPP+NWT YD+GAHLF
Sbjct: 377 TLKTITKDTQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQGAHLF 436
Query: 2298 LPSRVMRTHGSRHQREAIKRAPRKQLESVFEALNTLGNTKWRVNKRVFGVIHKIWATGGR 2119
LPS VMR HGS+ QR+A+KRA R QLE VF+AL+TLGNTKWR+NKRV V+ +IWA+GG
Sbjct: 437 LPSYVMRIHGSKQQRDAVKRASRNQLEPVFKALDTLGNTKWRINKRVLVVVDRIWASGGH 496
Query: 2118 LADLVDREDVPLPVQPDTEDEAEIRSWKWKVKTLKKENSERHSKRCDVELKLAVAWKMKD 1939
LA LVDRED PLP +P TEDEAEIR W WKV+++KKENSERHS+RCD+ELKLAVA KMKD
Sbjct: 497 LAGLVDREDAPLPEEPQTEDEAEIRKWTWKVRSVKKENSERHSQRCDIELKLAVARKMKD 556
Query: 1938 EDGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHMANLYA 1759
E+GF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILEFAEGRPLGKSGLRWLKIH+ANLYA
Sbjct: 557 EEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLANLYA 616
Query: 1758 GGVDKLSYDGRIAFTENHLDDIFDSADKPLEGRRWWLGAEDPFQCLVACINLSDALRSSS 1579
GGVDKLSYDGRI+FTENHLDDIFDSAD+PLEGRRWWLGAEDPFQCL ACINLS+ALRS S
Sbjct: 617 GGVDKLSYDGRISFTENHLDDIFDSADQPLEGRRWWLGAEDPFQCLAACINLSEALRSPS 676
Query: 1578 PETTISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLEIMRV 1399
PET SH P+HQDGSCNGLQHYAALGRDKLGAAAVNLV G+KPADVYSGIA RVL+IM+
Sbjct: 677 PETATSHTPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGEKPADVYSGIATRVLDIMQR 736
Query: 1398 DAEKDPVTYPDALHARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIEDD 1219
DAEKDP P+++HA+LL++QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER I DD
Sbjct: 737 DAEKDPAINPNSVHAKLLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCIIADD 796
Query: 1218 SQLFQASNYAAKITLTALEEMFQAARCIMSWLGDCAKVIASENQLVQWTTPLGLPVVQPY 1039
QL+ A+ YAAK TL ALEEMF+ AR IM+WLG+CAKVIASENQ V+WTTPLGLPVVQPY
Sbjct: 797 PQLYSAACYAAKTTLMALEEMFEGARGIMAWLGECAKVIASENQPVRWTTPLGLPVVQPY 856
Query: 1038 RVLGMHLIKTSLQILTLRRETDKVMVQRQKTAFPPNFVHSLDGSHMMMTAIACKKAGLNF 859
R LG HLIKTSLQ+LTL+RETDKVMV+RQ+TAFPPNFVHSLDGSHMMMTA+ACK+AGLNF
Sbjct: 857 RQLGRHLIKTSLQVLTLKRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKEAGLNF 916
Query: 858 AGV------------------------XXXTPILENLLESFQESFPKLTFPPLPERGDFD 751
AGV PILENLLESFQ SFP L FPPLPERG FD
Sbjct: 917 AGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQSSFPNLKFPPLPERGVFD 976
Query: 750 LKEVLKSPYFFN 715
LK+VL+S YFFN
Sbjct: 977 LKDVLRSTYFFN 988