BLASTX nr result

ID: Akebia25_contig00009604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00009604
         (319 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513573.1| Cyclic nucleotide-gated ion channel, putativ...    64   3e-08
ref|XP_007038982.1| Cyclic nucleotide gated channel 1 isoform 1 ...    63   4e-08
ref|XP_002322017.2| cyclic nucleotide-gated channel C family pro...    57   3e-06
ref|XP_002268992.1| PREDICTED: cyclic nucleotide-gated ion chann...    57   3e-06

>ref|XP_002513573.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223547481|gb|EEF48976.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 838

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 36/70 (51%), Positives = 46/70 (65%)
 Frame = +3

Query: 102 MNYREGKFVRFQTRNSEGSSSSKRQYSTRDGL*SGKLMNSISSFSERIQRSFEWGSKGIK 281
           MNY + KFVRFQ   SE   S + QYS  DG+ S K+  SI+S SE+ QR  E GS+ IK
Sbjct: 1   MNYSQEKFVRFQDWRSE--KSMETQYSVSDGIHSRKIRMSITSVSEKFQRGLESGSERIK 58

Query: 282 SVRKSLRFHS 311
            +RKSL+ +S
Sbjct: 59  RIRKSLKSYS 68


>ref|XP_007038982.1| Cyclic nucleotide gated channel 1 isoform 1 [Theobroma cacao]
           gi|590673757|ref|XP_007038983.1| Cyclic nucleotide gated
           channel 1 isoform 1 [Theobroma cacao]
           gi|508776227|gb|EOY23483.1| Cyclic nucleotide gated
           channel 1 isoform 1 [Theobroma cacao]
           gi|508776228|gb|EOY23484.1| Cyclic nucleotide gated
           channel 1 isoform 1 [Theobroma cacao]
          Length = 713

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 37/72 (51%), Positives = 48/72 (66%)
 Frame = +3

Query: 102 MNYREGKFVRFQTRNSEGSSSSKRQYSTRDGL*SGKLMNSISSFSERIQRSFEWGSKGIK 281
           M+Y   KFVRFQ  NSE   S++ QYS   G+ SG++  +I+SFSE+ QR  E GS+ IK
Sbjct: 1   MSYPPEKFVRFQDWNSE--KSTEAQYSDNKGINSGRVRFAINSFSEKFQRGVESGSERIK 58

Query: 282 SVRKSLRFHSPN 317
            +RKSLR  S N
Sbjct: 59  GIRKSLRSCSFN 70


>ref|XP_002322017.2| cyclic nucleotide-gated channel C family protein [Populus
           trichocarpa] gi|550321788|gb|EEF06144.2| cyclic
           nucleotide-gated channel C family protein [Populus
           trichocarpa]
          Length = 705

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/72 (43%), Positives = 44/72 (61%)
 Frame = +3

Query: 102 MNYREGKFVRFQTRNSEGSSSSKRQYSTRDGL*SGKLMNSISSFSERIQRSFEWGSKGIK 281
           MN  + KFVRFQ   SE ++  +  YS  +G+  GK+  +ISS SE++QR  E GS   +
Sbjct: 1   MNQPQEKFVRFQDWKSEKTTEGR--YSASNGIYPGKIRTTISSVSEKVQRGLESGSASFR 58

Query: 282 SVRKSLRFHSPN 317
            + KSL+ HS N
Sbjct: 59  RISKSLKSHSFN 70


>ref|XP_002268992.1| PREDICTED: cyclic nucleotide-gated ion channel 1 [Vitis vinifera]
           gi|302143681|emb|CBI22542.3| unnamed protein product
           [Vitis vinifera]
          Length = 709

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/70 (47%), Positives = 45/70 (64%)
 Frame = +3

Query: 102 MNYREGKFVRFQTRNSEGSSSSKRQYSTRDGL*SGKLMNSISSFSERIQRSFEWGSKGIK 281
           MNYR+ KFVRFQ  +SE SS  K      +G+ SGK+  +I+S S + QR  E GS+ I 
Sbjct: 1   MNYRQEKFVRFQDWSSERSSEGK--IPINNGVRSGKIRLAINSVSGKFQRGLECGSERIN 58

Query: 282 SVRKSLRFHS 311
           S+R+SL+  S
Sbjct: 59  SIRRSLKSFS 68


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