BLASTX nr result
ID: Akebia25_contig00008626
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00008626
(3996 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 1472 0.0
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1460 0.0
ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun... 1434 0.0
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun... 1414 0.0
gb|EYU28900.1| hypothetical protein MIMGU_mgv1a000798mg [Mimulus... 1395 0.0
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1390 0.0
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras... 1390 0.0
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras... 1389 0.0
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 1387 0.0
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 1386 0.0
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 1386 0.0
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 1385 0.0
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 1385 0.0
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr... 1382 0.0
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 1380 0.0
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 1380 0.0
ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theob... 1379 0.0
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer... 1373 0.0
ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m... 1371 0.0
emb|CBI27412.3| unnamed protein product [Vitis vinifera] 1362 0.0
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
protein product [Vitis vinifera]
Length = 1035
Score = 1472 bits (3810), Expect = 0.0
Identities = 756/1045 (72%), Positives = 843/1045 (80%), Gaps = 23/1045 (2%)
Frame = -2
Query: 3812 MTSYRTIIFSANLTNKFNLSISIDKPSLIIFHPISSKQKSTVMWRRVVKQIA-------- 3657
M+S +T I SANL +L IS +KP+ +P+ +K TVMWR + K+
Sbjct: 1 MSSGKTPILSANLGRDLDLIISFEKPTNFRPNPL---KKPTVMWRNIAKRAIPRAPRKCV 57
Query: 3656 --SSRKLMR------FSQSTIFQE--KTRPFELKNGVNFRSFEMGICQNGKILFGEEDMG 3507
S+ L R FSQ IF E K FE + + EMG + G+I E+ +G
Sbjct: 58 YLDSQPLSRRYSFLGFSQDLIFPEIMKFGTFEPSSCSSSGFSEMGFRRIGEISSREDAVG 117
Query: 3506 RPGFRCFPNPIGFSGFSNHPKGYSSSVAEAVPSTDTEEDVSVVDEIQVXXXXXXXXXXXX 3327
RP F C N +GFSGF PK Y+S VAEAV STD EEDVS DEIQ
Sbjct: 118 RPSFGCLRNQMGFSGFC--PKSYAS-VAEAVSSTDVEEDVSASDEIQELLGEMKKEEKRQ 174
Query: 3326 XXLNRQNQPKGVGGMGLGKYQYQLLRRRQMKIETQSWDQAAKEYKELLADMCEQKLAPNL 3147
R+ + K GM G+Y LRRRQ+KIET++W+ AAKEYKELL DMCEQKLAPNL
Sbjct: 175 VNFKRREKLKMERGMEQGRYLR--LRRRQVKIETEAWELAAKEYKELLMDMCEQKLAPNL 232
Query: 3146 PYMKSLFLGWFQPLCDCIAQEQELCRQGKHRGAYAPYFDQLPADMMAVITMHKLMGLLMT 2967
PYMKSLFLGWF+PL D I +EQELCR GK++ AYAPYFDQLPADMM+VITMHKL+GLLMT
Sbjct: 233 PYMKSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPYFDQLPADMMSVITMHKLVGLLMT 292
Query: 2966 GGDPGSTRVVQAACHIGEAIEHEVRIHXXXXXXXXXXXXXXXXXEVE---VDPVTKEQEK 2796
GG+ GSTRVVQAAC IG+AIE EVRIH VE DPV EQEK
Sbjct: 293 GGEHGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVGKDKN--VEGGGFDPVIHEQEK 350
Query: 2795 LRHKVTDLMKKQKLHQVRLIVRGQDDMKPWGQEAHAKVGCHLIELLMRTAYIQPPV-NQL 2619
LR KVT+LMKKQKLH R IV+G D+ KPWG EA AKVG LIELLM+TAYIQPPV NQL
Sbjct: 351 LRKKVTNLMKKQKLHAARQIVKGHDNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQL 410
Query: 2618 ADGPPDIRPAFIHSLKMIKKGAMKTGRKLGIIECDPLVRQGLEKTARHMVIPYMPMLVPP 2439
AD PPDIRPAF+H+ K + + A K GR+ G+IECDPLV++GLE+TARHMVIPY+PMLVPP
Sbjct: 411 ADTPPDIRPAFVHTFKTVMREAKKIGRRFGVIECDPLVKKGLERTARHMVIPYVPMLVPP 470
Query: 2438 INWTGYDKGAYLFLPSYCMRTHGARQQREAIKRAPQKQLEHVFEALNTLGNTKWRVNKRM 2259
+ WTGYDKGA+LFLPSY MRTHGARQQREA+KRAP+ QLE VFEALNTLGNTKWR+NKR+
Sbjct: 471 LKWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPRNQLEPVFEALNTLGNTKWRINKRL 530
Query: 2258 LDVIDRIWASGGRLADLVDREDVPIPMEPDTEDEPELXXXXXXXXXXXKQNSERHSQRCD 2079
DV+DRIWA GG LADLVDR DVP+P +PDTEDE +L K NSERHSQRCD
Sbjct: 531 FDVVDRIWAGGGCLADLVDRNDVPLPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQRCD 590
Query: 2078 VELKLAVARQMKDEDGFFYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGNSG 1899
+ELKLAVAR+MKDEDGFFYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG+SG
Sbjct: 591 IELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSG 650
Query: 1898 LRWLKIHLANLYAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLA 1719
L WLKIHLANL+AGGVDKLS++GRI FTENHLDDIFDSADRPLEG+RWWL AEDPFQ LA
Sbjct: 651 LHWLKIHLANLFAGGVDKLSHEGRITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLA 710
Query: 1718 VCINLSEAFRSSSPQDAVSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVY 1539
CINLSEA RSSSP+ +SH+PVHQDGSCNGLQHYAALGRD+LGA AVNLVAGEKPADVY
Sbjct: 711 ACINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVY 770
Query: 1538 SGIAARVLEIMRKDAEKDPVVDPNALRARLLINHVDRKLVKQTVMTSVYGVTYIGARDQI 1359
SGIAARVL+IM++DAEKDP + P+ALRAR+LIN VDRKLVKQTVMTSVYGVTYIGARDQI
Sbjct: 771 SGIAARVLDIMKRDAEKDPAIFPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQI 830
Query: 1358 KRRLKERNALPDE-ELFGAACYAAKTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVR 1182
KRRLKERNA+ D+ ELFGAACYAAK TLTALGEMFQAARSIMSWLGDCAK+IASENQPVR
Sbjct: 831 KRRLKERNAIADDVELFGAACYAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVR 890
Query: 1181 WTTPYGLPVVQPYRQLGRHLIKTSLQVLTLKRDTDKIMVKRQRTAFPPNFVHSLDGSHMM 1002
WTTP GLPVVQPYR+LGRHLIKTSLQVLTL+R+T+ IMVKRQRTAFPPNFVHSLDGSHMM
Sbjct: 891 WTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMM 950
Query: 1001 MTAVACNKAGLNFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQQSFPT 822
MTA+AC KAGLNFAGVHDSYWTHACDVD MNR+LREKFV+LYETPILENLLESFQQSFP
Sbjct: 951 MTAIACKKAGLNFAGVHDSYWTHACDVDEMNRLLREKFVQLYETPILENLLESFQQSFPA 1010
Query: 821 LTFPPFPERGDFDLKEVLESPYFFN 747
L FPP PERGDFDL+EVLESPYFFN
Sbjct: 1011 LEFPPLPERGDFDLREVLESPYFFN 1035
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 1460 bits (3780), Expect = 0.0
Identities = 734/992 (73%), Positives = 819/992 (82%), Gaps = 12/992 (1%)
Frame = -2
Query: 3686 MWRRVVKQIASSRKLMRFSQSTIFQ-----------EKTRPFELKNGVNFRSFEMGICQN 3540
MWR + K A +R+L SQ + F +K R E ++ VN G+ +
Sbjct: 1 MWRNLAKH-AYTRRLQLSSQHSSFSPSNCTSRFYFPDKARALESQDHVNSLRPVAGLRRI 59
Query: 3539 GKILFGEEDMGRPGFRCFPNPIGFSGFSNHPKGYSSSVAEAVPSTDTEEDVSVVDEIQVX 3360
G + F ++++GRPGF P+ F G + KGY+S+ AEA+ S EED+S VDE+Q
Sbjct: 60 GVLSFQQDELGRPGFGVTKTPVNFFGLFGYQKGYASA-AEAIAS---EEDMSGVDEVQ-- 113
Query: 3359 XXXXXXXXXXXXXLNRQNQPKGVGGMGLGKYQYQLLRRRQMKIETQSWDQAAKEYKELLA 3180
+ QPK +GG+ GK+ +LRRRQ+K+ET++W++AAKEY+ELL+
Sbjct: 114 ----ELVEEVNKGDKLEKQPKLIGGVAQGKHN--VLRRRQIKMETEAWEEAAKEYRELLS 167
Query: 3179 DMCEQKLAPNLPYMKSLFLGWFQPLCDCIAQEQELCRQGKHRGAYAPYFDQLPADMMAVI 3000
DMCEQKLAPNLPY+KSLFLGWF+PL D IA EQ+LC+QGK+R AYAPYFD LPADMMAVI
Sbjct: 168 DMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVI 227
Query: 2999 TMHKLMGLLMTGGDPGSTRVVQAACHIGEAIEHEVRIHXXXXXXXXXXXXXXXXXEVEVD 2820
TMHKLMGLLMTG GS RVVQAACHIGEAIEHEVRI +
Sbjct: 228 TMHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGS-N 286
Query: 2819 PVTKEQEKLRHKVTDLMKKQKLHQVRLIVRGQDDMKPWGQEAHAKVGCHLIELLMRTAYI 2640
PVTKEQEKLR KV+ LMKKQKL QVR IV+ QDD KPWGQ+A+ KVG LIELL+ TAYI
Sbjct: 287 PVTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYI 346
Query: 2639 QPPVNQLADGPPDIRPAFIHSLKMIKKGAMKTGRKLGIIECDPLVRQGLEKTARHMVIPY 2460
QPP +QL DGPPDIRPAF+H+LK + K K R+ G+IECDPLVR+GLEKTARHMVIPY
Sbjct: 347 QPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPY 406
Query: 2459 MPMLVPPINWTGYDKGAYLFLPSYCMRTHGARQQREAIKRAPQKQLEHVFEALNTLGNTK 2280
MPMLVPP+NWTGYDKGAYLFLPSY MR HGARQQREAIKRAP+K LE FEALNTLGNTK
Sbjct: 407 MPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTK 466
Query: 2279 WRVNKRMLDVIDRIWASGGRLADLVDREDVPIPMEPDTEDEPELXXXXXXXXXXXKQNSE 2100
WR+NKR+L VIDRIWASGGRLADLVDREDVP+P EPDTEDE E+ K+NSE
Sbjct: 467 WRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSE 526
Query: 2099 RHSQRCDVELKLAVARQMKDEDGFFYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 1920
RHSQRCD+ELKLAVAR+MKDEDGFFYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEG
Sbjct: 527 RHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 586
Query: 1919 RPLGNSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEGRRWWLGAE 1740
RPLG SGLRWLKIHLAN+YAGGVDKLSY+GR+AFTENHL+DIFDSADRPLEGRRWWL AE
Sbjct: 587 RPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAE 646
Query: 1739 DPFQCLAVCINLSEAFRSSSPQDAVSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 1560
DPFQCLA CINLSEA RSSSP+ +SHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG
Sbjct: 647 DPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 706
Query: 1559 EKPADVYSGIAARVLEIMRKDAEKDPVVDPNALRARLLINHVDRKLVKQTVMTSVYGVTY 1380
EKPADVYSGIAARVL+IM++DA+KDP +PNALRARLLI+ VDRKLVKQTVMTSVYGVTY
Sbjct: 707 EKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTY 766
Query: 1379 IGARDQIKRRLKERNALPDE-ELFGAACYAAKTTLTALGEMFQAARSIMSWLGDCAKVIA 1203
IGARDQIKRRLKER A+ DE E+F A+CYAAKTTLTALGEMF+AARSIMSWLGDCAKVIA
Sbjct: 767 IGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIA 826
Query: 1202 SENQPVRWTTPYGLPVVQPYRQLGRHLIKTSLQVLTLKRDTDKIMVKRQRTAFPPNFVHS 1023
SEN PVRW TP GLPVVQPYR+LGRHLIKTSLQVL+L+R+TDK+MVKRQRTAFPPNFVHS
Sbjct: 827 SENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHS 886
Query: 1022 LDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLES 843
LDGSHMMMTAVAC KAGLNFAGVHDSYWTHACDVD MNRILREKFVELY PILENLLE
Sbjct: 887 LDGSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEG 946
Query: 842 FQQSFPTLTFPPFPERGDFDLKEVLESPYFFN 747
FQ+SFPTL FPP PERGDFDL+EVLESPYFFN
Sbjct: 947 FQKSFPTLNFPPLPERGDFDLREVLESPYFFN 978
>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
gi|462422319|gb|EMJ26582.1| hypothetical protein
PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 1434 bits (3713), Expect = 0.0
Identities = 723/1011 (71%), Positives = 814/1011 (80%), Gaps = 31/1011 (3%)
Frame = -2
Query: 3686 MWRRVVKQIAS--------------SRKLMRFSQSTIFQEKTRPFELKNGVNFRSFEMGI 3549
MWR + KQ+AS S M FSQ + F +K R FE + +N R MG
Sbjct: 1 MWRNLAKQVASRKTNLSSQSHFGSPSSTSMIFSQESSFLDKARHFEARKCINNRILVMGF 60
Query: 3548 CQNGKILFGEEDMGRPGFRCFPNPIGFSGFSNHPKGYSSSVAEAVPSTDTEEDVSVVDEI 3369
Q G + +E++GR P G SGF N+ KGY+S VAEA+ STD EED S +EI
Sbjct: 61 RQVGDMASQKEELGRCSSLNPSYPYGISGFCNYAKGYAS-VAEAIASTDGEEDSSGSEEI 119
Query: 3368 QVXXXXXXXXXXXXXXLNRQNQPKGVG-GMGLGKYQYQLLRRRQMKIETQSWDQAAKEYK 3192
Q + QPK V GMG+GKY LLR+RQ+K+ET++W +AAKEY+
Sbjct: 120 Q--EMLEDLIRENNMVESHFKQPKRVVVGMGVGKYN--LLRKRQIKLETEAWQEAAKEYQ 175
Query: 3191 ELLADMCEQKLAPNLPYMKSLFLGWFQPLCDCIAQEQELCRQGKHRGAYAPYFDQLPADM 3012
ELLADMCEQKLAPNLPY+KSLFLGWF+PL D IA +Q+ C+Q R ++APYFD LPAD
Sbjct: 176 ELLADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQPNSRQSHAPYFDHLPADK 235
Query: 3011 MAVITMHKLMGLLMT-GGDPGSTRVVQAACHIGEAIEHEVRIHXXXXXXXXXXXXXXXXX 2835
MAVITMHKLMGLLMT G GS RVVQAAC IGEAIEHEVRIH
Sbjct: 236 MAVITMHKLMGLLMTNNGGIGSVRVVQAACAIGEAIEHEVRIHRFLEKTKKKKNTIDKKA 295
Query: 2834 EVEVDPV--------------TKEQEKLRHKVTDLMKKQKLHQVRLIVRGQDDMKPWGQE 2697
E + PV TKEQE+LR KV L+K+QK+ QVR IV+ Q+D+KPWGQE
Sbjct: 296 EADSVPVTIEQEKLADEQEKLTKEQERLRKKVNKLIKRQKMQQVRGIVKEQEDLKPWGQE 355
Query: 2696 AHAKVGCHLIELLMRTAYIQPPVNQLADGPPDIRPAFIHSLKMIKKGAMKTGRKLGIIEC 2517
AH KVGC LI+LLM TAYIQPPV+Q+ DGPPDIRPAF+H+LK I + KT R+ G+IEC
Sbjct: 356 AHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQKTSRRYGVIEC 415
Query: 2516 DPLVRQGLEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYCMRTHGARQQREAIKRA 2337
DP+VR+G+EKTARHMV+PYMPMLVPPINWTGYD+GAYLFLPSY MRTHGA+QQRE +KR
Sbjct: 416 DPIVRKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQREVVKRT 475
Query: 2336 PQKQLEHVFEALNTLGNTKWRVNKRMLDVIDRIWASGGRLADLVDREDVPIPMEPDTEDE 2157
P+KQLE VFEAL+TLG+TKWRVNKR+L VIDRIWASGGRLADLVDREDVP+P EPDTEDE
Sbjct: 476 PRKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDE 535
Query: 2156 PELXXXXXXXXXXXKQNSERHSQRCDVELKLAVARQMKDEDGFFYPHNVDFRGRAYPMHP 1977
E+ K+NSERHSQRCD+ELKLA +R+MKDE+GF+YPHN+DFRGRAYPMHP
Sbjct: 536 AEIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGRAYPMHP 595
Query: 1976 YLNHLGSDLCRGILEFAEGRPLGNSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLDD 1797
YLNHLGSD+CRGILEF+EGR LG SGLRWLKIHLANLYAGGVDKLS+D R AFTENH+D+
Sbjct: 596 YLNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAAFTENHVDE 655
Query: 1796 IFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEAFRSSSPQDAVSHMPVHQDGSCNGLQH 1617
IFDSADRPLEGRRWWLGAEDPFQCLA CINL EA RS SP+ +S+MPVHQDGSCNGLQH
Sbjct: 656 IFDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDGSCNGLQH 715
Query: 1616 YAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLEIMRKDAEKDPVVDPNALRARLLINH 1437
YAALGRDKLGAAAVNLV G+KPADVYSGIAARVL+IMR DAEKDP +PNAL ARLLIN
Sbjct: 716 YAALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALHARLLINQ 775
Query: 1436 VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNALPDE-ELFGAACYAAKTTLTALGEM 1260
VDRKLVKQTVMTSVYGVTY+GARDQIKRRLKER ++ D+ LF AACYAA+TTLTALGEM
Sbjct: 776 VDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAAACYAARTTLTALGEM 835
Query: 1259 FQAARSIMSWLGDCAKVIASENQPVRWTTPYGLPVVQPYRQLGRHLIKTSLQVLTLKRDT 1080
F+AARSIMSWLG+CAKVIASENQPVRW TP GLPVVQPYRQLGRHLIKTSLQVLTL+R+T
Sbjct: 836 FEAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQVLTLQRET 895
Query: 1079 DKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDVMNRIL 900
DK+MVKRQRTAFPPNFVHSLDGSHMMMTAVAC KAGLNFAGVHDSYWTHACD+D MNRIL
Sbjct: 896 DKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDIDEMNRIL 955
Query: 899 REKFVELYETPILENLLESFQQSFPTLTFPPFPERGDFDLKEVLESPYFFN 747
REKFVELYE PILENLLE FQQSFPTLTFPP P+RGDFDL++VLESPYFFN
Sbjct: 956 REKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006
>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
gi|462411068|gb|EMJ16117.1| hypothetical protein
PRUPE_ppa000719mg [Prunus persica]
Length = 1024
Score = 1414 bits (3660), Expect = 0.0
Identities = 716/1037 (69%), Positives = 815/1037 (78%), Gaps = 15/1037 (1%)
Frame = -2
Query: 3812 MTSYRTIIFSANLTNKFNLSISIDKPSLIIFHPISSKQKSTVMWRRVVKQIASSRK---- 3645
M+ +T + AN++ F S +IFH S ST +WR KQ S ++
Sbjct: 1 MSRSQTPLSPANISKNFTFH------SPLIFHKNPS-MISTTVWRNFAKQAISRKQRFHI 53
Query: 3644 ----------LMRFSQSTIFQEKTRPFELKNGVNFRSFEMGICQNGKILFGEEDMGRPGF 3495
L+ Q ++F +PFEL + + R E+G G I E+ M +P F
Sbjct: 54 NSQSFSRAYSLLGICQESVFPGNFKPFELSSCSSLRFSEVGFRGKGAISSPEDCMCKPSF 113
Query: 3494 RCFPNPIGFSGFSNHPKGYSSSVAEAVPSTDTEEDVSVVDEIQVXXXXXXXXXXXXXXLN 3315
NPI F+GF PKGY+S VAEAV STD EE+VSVVDE+Q
Sbjct: 114 WSVRNPIWFNGFC--PKGYAS-VAEAVSSTDVEEEVSVVDEVQELLQQMSIEEKREAQYK 170
Query: 3314 RQNQPKGVGGMGLGKYQYQLLRRRQMKIETQSWDQAAKEYKELLADMCEQKLAPNLPYMK 3135
++ + GMG GKY +L+RRQ+KIET++W++AAKEY+EL+ DMCEQKLAPNLPYMK
Sbjct: 171 QRTRQNRARGMGQGKYH--MLKRRQIKIETEAWERAAKEYRELMMDMCEQKLAPNLPYMK 228
Query: 3134 SLFLGWFQPLCDCIAQEQELCRQGKHRGAYAPYFDQLPADMMAVITMHKLMGLLMTGGDP 2955
SLFLGWF+PL + I +EQ+LCR+GK++ AYAPY DQLPADMM+VITMHKLMGLLMTGG+
Sbjct: 229 SLFLGWFEPLRNAIDKEQDLCRKGKNKTAYAPYIDQLPADMMSVITMHKLMGLLMTGGEH 288
Query: 2954 GSTRVVQAACHIGEAIEHEVRIHXXXXXXXXXXXXXXXXXEVEVDPVTKEQEKLRHKVTD 2775
G+ RVV AAC IGEAIE EVRIH E D KE+EKL KVT+
Sbjct: 289 GTCRVVAAACTIGEAIEQEVRIHKFLEMTRKKKVDKDQENG-ESDAAKKEREKLNKKVTN 347
Query: 2774 LMKKQKLHQVRLIVRGQDDMKPWGQEAHAKVGCHLIELLMRTAYIQPPVNQLADGPPDIR 2595
LMKKQKL VR IV D K W EA AKVG LIELL +TA+IQPP +QLADGPPDIR
Sbjct: 348 LMKKQKLKAVRGIVSKHDASKSWSLEARAKVGSRLIELLTQTAFIQPPADQLADGPPDIR 407
Query: 2594 PAFIHSLKMIKKGAMKTGRKLGIIECDPLVRQGLEKTARHMVIPYMPMLVPPINWTGYDK 2415
PAF+H+ + + K A R+ G+IECDPLV +GLEKTARHMVIPYMPMLVPP+NWTGYDK
Sbjct: 408 PAFVHTFRTVAKDAKNASRRYGVIECDPLVLKGLEKTARHMVIPYMPMLVPPLNWTGYDK 467
Query: 2414 GAYLFLPSYCMRTHGARQQREAIKRAPQKQLEHVFEALNTLGNTKWRVNKRMLDVIDRIW 2235
G Y FLPSY MR HGARQQREAIKR P++QLE VF+AL+ LGNT+WRVNKR+L V+DRIW
Sbjct: 468 GGYFFLPSYVMRIHGARQQREAIKRTPREQLEPVFKALDALGNTRWRVNKRVLSVVDRIW 527
Query: 2234 ASGGRLADLVDREDVPIPMEPDTEDEPELXXXXXXXXXXXKQNSERHSQRCDVELKLAVA 2055
ASGG LADLVDR DVP+P EPDTEDE L K+N ERHSQRCD ELKLAVA
Sbjct: 528 ASGGHLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVKKENMERHSQRCDTELKLAVA 587
Query: 2054 RQMKDEDGFFYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGNSGLRWLKIHL 1875
R+MKDE+GF+YPHN+DFRGRAYPMHPYLNHLGSD+CRGILEF EGRPLG SGL WLKIHL
Sbjct: 588 RKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFQEGRPLGKSGLSWLKIHL 647
Query: 1874 ANLYAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEA 1695
ANLYAGGVDKLS +GRIAFTENHLDDIFDS D+PLEGRRWWL AEDPFQCLAVCINL+EA
Sbjct: 648 ANLYAGGVDKLSLEGRIAFTENHLDDIFDSVDKPLEGRRWWLKAEDPFQCLAVCINLAEA 707
Query: 1694 FRSSSPQDAVSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVL 1515
RSSSP+ +SH+PVHQDGSCNGLQHYAALGRDKLGAA+VNLV GEKPADVYSGIA RVL
Sbjct: 708 LRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVTGEKPADVYSGIAVRVL 767
Query: 1514 EIMRKDAEKDPVVDPNALRARLLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERN 1335
EIMR+DA+KDPVV P ALRA+LLIN VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER
Sbjct: 768 EIMRRDAQKDPVVFPEALRAKLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG 827
Query: 1334 ALPDE-ELFGAACYAAKTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPYGLP 1158
++ D+ E+FG ACYAAK TLTALGEMF+AAR IMSWLG+CAK+IASENQPVRWTTP GLP
Sbjct: 828 SISDDAEIFGCACYAAKITLTALGEMFEAARGIMSWLGECAKIIASENQPVRWTTPLGLP 887
Query: 1157 VVQPYRQLGRHLIKTSLQVLTLKRDTDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNK 978
VVQPYR+ GRHLIKTSLQVLTL+R+T+K+MVKRQRTAFPPNFVHSLD SHMMMTA+AC K
Sbjct: 888 VVQPYRKFGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDSSHMMMTAIACKK 947
Query: 977 AGLNFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQQSFPTLTFPPFPE 798
AGL+FAGVHDSYWTHACDVD MN+ILREKFV+LYETPILENLLESFQQSFP LTFPP PE
Sbjct: 948 AGLSFAGVHDSYWTHACDVDEMNKILREKFVQLYETPILENLLESFQQSFPALTFPPLPE 1007
Query: 797 RGDFDLKEVLESPYFFN 747
RGDFDL++VLESPYFFN
Sbjct: 1008 RGDFDLRDVLESPYFFN 1024
>gb|EYU28900.1| hypothetical protein MIMGU_mgv1a000798mg [Mimulus guttatus]
Length = 983
Score = 1395 bits (3612), Expect = 0.0
Identities = 699/997 (70%), Positives = 807/997 (80%), Gaps = 17/997 (1%)
Frame = -2
Query: 3686 MWRRVVKQIASSRKLMRFSQS---------------TIFQEKTRPFELKNGVNFRSFEMG 3552
MWR + KQ + R FS+S +IF E P +L++ +N E+G
Sbjct: 1 MWRNLSKQ-SYLRNFKVFSESHPSPNAFSAGKSPKDSIFVENAVPRQLRSCINTCGSELG 59
Query: 3551 ICQNGKILFGEEDMGRPGFRCFPNPIGFSGFSNHPKGYSSSVAEAVPSTDTEEDVSVVDE 3372
+ + P + + F G + +GY+++ AEA+ ST EE VDE
Sbjct: 60 FRRALVFWRPPREASCPNYAISSHTFRFFGST---RGYAAA-AEALVSTSEEE----VDE 111
Query: 3371 IQVXXXXXXXXXXXXXXLNR-QNQPKGVGGMGLGKYQYQLLRRRQMKIETQSWDQAAKEY 3195
+Q NR Q QPK VGGMGLGKY LRRRQ+KIET++W+ AAKEY
Sbjct: 112 LQELIEEINKEINVKSTDNREQKQPKLVGGMGLGKYNS--LRRRQIKIETEAWENAAKEY 169
Query: 3194 KELLADMCEQKLAPNLPYMKSLFLGWFQPLCDCIAQEQELCRQGKHRGAYAPYFDQLPAD 3015
+ELL DMCEQKLAPNLPY+KSLFLGWF+PL D IA EQ+LC++GK+RGAYAPYFDQLPA+
Sbjct: 170 QELLEDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCKEGKNRGAYAPYFDQLPAE 229
Query: 3014 MMAVITMHKLMGLLMTGGDPGSTRVVQAACHIGEAIEHEVRIHXXXXXXXXXXXXXXXXX 2835
MMAVITMHKLMGLLMTGG GS RVVQAACHIGEAIEHEVRIH
Sbjct: 230 MMAVITMHKLMGLLMTGGGNGSARVVQAACHIGEAIEHEVRIHKFLDNCKRKNALNRTSE 289
Query: 2834 EVEVDPVTKEQEKLRHKVTDLMKKQKLHQVRLIVRGQDDMKPWGQEAHAKVGCHLIELLM 2655
E DP KEQ++LR KV LMKKQK+ QVR IVR QDD+KPWGQ+A KVGC LI++L
Sbjct: 290 EGP-DPEAKEQDRLRKKVKILMKKQKVQQVRNIVRHQDDLKPWGQDAQVKVGCRLIQILT 348
Query: 2654 RTAYIQPPVNQLADGPPDIRPAFIHSLKMIKKGAMKTGRKLGIIECDPLVRQGLEKTARH 2475
+TAYIQPPV+Q DG PDIRPAF+H+LK ++ +K R+ G+IECDPLVR+G+EKTARH
Sbjct: 349 QTAYIQPPVDQRDDGAPDIRPAFVHTLKCVE--TLKGSRRYGVIECDPLVRKGMEKTARH 406
Query: 2474 MVIPYMPMLVPPINWTGYDKGAYLFLPSYCMRTHGARQQREAIKRAPQKQLEHVFEALNT 2295
MVIPYMPMLVPP+NWTGY++GAYLFLPSY MRTHGA+QQREA+KR P+++LE +F+ALNT
Sbjct: 407 MVIPYMPMLVPPLNWTGYERGAYLFLPSYMMRTHGAKQQREAVKRTPKQELEPIFQALNT 466
Query: 2294 LGNTKWRVNKRMLDVIDRIWASGGRLADLVDREDVPIPMEPDTEDEPELXXXXXXXXXXX 2115
LGNTKWRVNKR+L V+DRIWA+GGRLADLVDRED+P+P EPDTEDE E+
Sbjct: 467 LGNTKWRVNKRILSVVDRIWANGGRLADLVDREDLPLPEEPDTEDEAEIKKWKWKVKAVK 526
Query: 2114 KQNSERHSQRCDVELKLAVARQMKDEDGFFYPHNVDFRGRAYPMHPYLNHLGSDLCRGIL 1935
K NSERHSQRCD+ELKLAVAR++K+E+GF+YPHN+DFRGRAYPMHPYLNHLGSDLCRGIL
Sbjct: 527 KVNSERHSQRCDIELKLAVARKIKEEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 586
Query: 1934 EFAEGRPLGNSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEGRRW 1755
EFAEGRPLG SGL+WLK+HLANLY GGVDK SYDGRI+FTENH++DIFDSADRPLEG+RW
Sbjct: 587 EFAEGRPLGKSGLQWLKVHLANLYGGGVDKFSYDGRISFTENHMEDIFDSADRPLEGKRW 646
Query: 1754 WLGAEDPFQCLAVCINLSEAFRSSSPQDAVSHMPVHQDGSCNGLQHYAALGRDKLGAAAV 1575
WLGAEDPFQCLA C++L+EA RS P+ VS++PVHQDGSCNGLQHYAALGRDKLGAAAV
Sbjct: 647 WLGAEDPFQCLATCMSLTEALRSPYPESTVSYIPVHQDGSCNGLQHYAALGRDKLGAAAV 706
Query: 1574 NLVAGEKPADVYSGIAARVLEIMRKDAEKDPVVDPNALRARLLINHVDRKLVKQTVMTSV 1395
NLVAG+KPADVYSGIAARVL+IM++DA KDP DPN +RARLLIN VDRKLVKQTVMTSV
Sbjct: 707 NLVAGDKPADVYSGIAARVLDIMKRDAAKDPADDPNVMRARLLINQVDRKLVKQTVMTSV 766
Query: 1394 YGVTYIGARDQIKRRLKERNALPDE-ELFGAACYAAKTTLTALGEMFQAARSIMSWLGDC 1218
YGVTYIGARDQIKRRLKER ++ D+ ELF ACYAAKTTLTALGEMF+AARSIMSWLGDC
Sbjct: 767 YGVTYIGARDQIKRRLKERASMEDDTELFACACYAAKTTLTALGEMFEAARSIMSWLGDC 826
Query: 1217 AKVIASENQPVRWTTPYGLPVVQPYRQLGRHLIKTSLQVLTLKRDTDKIMVKRQRTAFPP 1038
AK+IA+EN PVRWTTP GLPVVQPYR+LGRH+IKTSLQVLTL+R+TDK+M KRQRTAFPP
Sbjct: 827 AKIIATENHPVRWTTPLGLPVVQPYRKLGRHMIKTSLQVLTLQRETDKVMAKRQRTAFPP 886
Query: 1037 NFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDVMNRILREKFVELYETPILE 858
NFVHSLDGSHMMMTA+AC++AGL+FAGVHDSYWTHACDVD MN ILREKFVELYE PILE
Sbjct: 887 NFVHSLDGSHMMMTAIACSEAGLSFAGVHDSYWTHACDVDKMNEILREKFVELYEAPILE 946
Query: 857 NLLESFQQSFPTLTFPPFPERGDFDLKEVLESPYFFN 747
NLL+ FQQSFP L FPP PERGDFDL+EVL+S YFFN
Sbjct: 947 NLLDGFQQSFPKLKFPPLPERGDFDLREVLDSTYFFN 983
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
tuberosum]
Length = 993
Score = 1390 bits (3599), Expect = 0.0
Identities = 707/1004 (70%), Positives = 802/1004 (79%), Gaps = 24/1004 (2%)
Frame = -2
Query: 3686 MWRRVVKQIASSRKLMRFSQSTIFQ-----EKTRPFELKNGVNFRSFEMGICQ------- 3543
MWR + KQ A SRKL S KTRP + +R+ +G+ Q
Sbjct: 1 MWRYISKQ-AYSRKLRNTHDSDFLGFAQSFGKTRPLQGLCEEIYRNPNLGVSQSSIFTRV 59
Query: 3542 NGK--ILFGE-EDMGRPGFRCFPNPIGFSGFSNHPKGYSS--------SVAEAVPSTDTE 3396
NGK L G ED R + F FS + S S AEA+ ST E
Sbjct: 60 NGKSRCLDGMCEDSCRNHYLGFSESSIFSRVKGDFRVCGSLGILRSYGSAAEAIASTSEE 119
Query: 3395 EDVSVVDEIQVXXXXXXXXXXXXXXLNRQNQPKGVGGMGLGKYQYQLLRRRQMKIETQSW 3216
+ +DEIQ + QPK VGGMG+GKY LLRRRQ+K+ET++W
Sbjct: 120 D----IDEIQELIEEMNKENEALKTNLQPKQPKTVGGMGIGKYN--LLRRRQIKVETEAW 173
Query: 3215 DQAAKEYKELLADMCEQKLAPNLPYMKSLFLGWFQPLCDCIAQEQELCRQGKHRGAYAPY 3036
+ AAKEY+ELL DMCEQKLAPNLPY+KSLFLGWF+PL D IA EQ+LC +GK+RGAYAP+
Sbjct: 174 EDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPF 233
Query: 3035 FDQLPADMMAVITMHKLMGLLMTGGDPGSTRVVQAACHIGEAIEHEVRIHXXXXXXXXXX 2856
FDQLPA+MMAVITMHKLMGLLMTGG GS RVVQAA HIGEAIEHE RIH
Sbjct: 234 FDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEKTKKNA 293
Query: 2855 XXXXXXXEVEVDPVTKEQEKLRHKVTDLMKKQKLHQVRLIVRGQDDMKPWGQEAHAKVGC 2676
+ KE+E+LR KV LMKKQKL QVR IV+ QDD KPWGQ+ KVGC
Sbjct: 294 LDGSLEETA--GDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKVGC 351
Query: 2675 HLIELLMRTAYIQPPVNQLADGPPDIRPAFIHSLKMIKKGAMKTGRKLGIIECDPLVRQG 2496
LI++L+ TAYIQPP +QL D PPDIRPAF+H+LK ++ +K R+ G+I+CDPLVR+G
Sbjct: 352 KLIQILIETAYIQPPNDQLDDCPPDIRPAFMHTLKTVE--TVKGSRRYGVIQCDPLVRKG 409
Query: 2495 LEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYCMRTHGARQQREAIKRAPQKQLEH 2316
L+KTARHMVIPYMPMLVPP NW+GYD+GAYLFLPSY MRTHGA+QQREA+KR P+KQLE
Sbjct: 410 LDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEP 469
Query: 2315 VFEALNTLGNTKWRVNKRMLDVIDRIWASGGRLADLVDREDVPIPMEPDTEDEPELXXXX 2136
VF+AL+TLGNTKWRVNKR+L ++DRIWASGGRLADLVDREDVP+P EPDTEDE E+
Sbjct: 470 VFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDVPLPEEPDTEDEEEIKKWK 529
Query: 2135 XXXXXXXKQNSERHSQRCDVELKLAVARQMKDEDGFFYPHNVDFRGRAYPMHPYLNHLGS 1956
K+N ERHSQRCD+ELKLAVAR+MKDE+GF+YPHN+DFRGRAYPMHPYLNHLGS
Sbjct: 530 WKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGS 589
Query: 1955 DLCRGILEFAEGRPLGNSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLDDIFDSADR 1776
DLCRGILEF+EGRPLG SGLRWLKIHLAN+Y GGVDKLSY+GR AF+ENH++DIFDSADR
Sbjct: 590 DLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRAAFSENHVEDIFDSADR 649
Query: 1775 PLEGRRWWLGAEDPFQCLAVCINLSEAFRSSSPQDAVSHMPVHQDGSCNGLQHYAALGRD 1596
PLEGRRWWLGAEDPFQCLA CIN+SEA RS SP+ ++SHMP+HQDGSCNGLQHYAALGRD
Sbjct: 650 PLEGRRWWLGAEDPFQCLATCINISEALRSPSPETSISHMPIHQDGSCNGLQHYAALGRD 709
Query: 1595 KLGAAAVNLVAGEKPADVYSGIAARVLEIMRKDAEKDPVVDPNALRARLLINHVDRKLVK 1416
KLGAAAVNLVAG+KPADVYSGIAARVL+IM++DA+KDP DPN +RARLLIN VDRKLVK
Sbjct: 710 KLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMRARLLINQVDRKLVK 769
Query: 1415 QTVMTSVYGVTYIGARDQIKRRLKERNALPDE-ELFGAACYAAKTTLTALGEMFQAARSI 1239
QTVMTSVYGVTYIGARDQIKRRLKER A+ D+ ELF AACYAAKTTLTALGEMF+AARSI
Sbjct: 770 QTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFSAACYAAKTTLTALGEMFEAARSI 829
Query: 1238 MSWLGDCAKVIASENQPVRWTTPYGLPVVQPYRQLGRHLIKTSLQVLTLKRDTDKIMVKR 1059
MSWLGDCAK+IA ENQPVRWTTP GLPVVQPYR+LGRHLIKTSLQ+LTL+R+TDK+MVKR
Sbjct: 830 MSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKR 889
Query: 1058 QRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDVMNRILREKFVEL 879
QRTAFPPNFVHSLDGSHMMMTA+ C +AGL+FAGVHDSYWTHA DVD MN+ILREKFVEL
Sbjct: 890 QRTAFPPNFVHSLDGSHMMMTAITCKEAGLSFAGVHDSYWTHASDVDQMNKILREKFVEL 949
Query: 878 YETPILENLLESFQQSFPTLTFPPFPERGDFDLKEVLESPYFFN 747
Y+ PILENLLESFQQSFP L FPP PERGDFDL+EVLESPYFFN
Sbjct: 950 YDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993
>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
AltName: Full=T7 bacteriophage-type single subunit RNA
polymerase 2; Flags: Precursor
gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 1390 bits (3597), Expect = 0.0
Identities = 707/1038 (68%), Positives = 820/1038 (78%), Gaps = 16/1038 (1%)
Frame = -2
Query: 3812 MTSYRTIIFSANLTNKFNLSISIDKPSLIIFHPISSKQKSTVMWRRVVKQIASSRKLMRF 3633
M+S +T I N+F DKP+ + +P + S +MWR ++KQ++S R
Sbjct: 1 MSSTKTPISLTIKLNQFT-----DKPTGLDINPYHN---SPIMWRNIIKQLSS-----RT 47
Query: 3632 SQSTIFQEKTRPFEL---------KNGVNFRSFEMGICQNGKILFGEEDMGR--PGFRCF 3486
Q +F K R + K+ FRS C N I+ G +++G PG
Sbjct: 48 PQKLLFSSKNRTYSFLGFGQDSIFKDNTKFRSLIPISCSN--IVMGFQNLGEYLPGDEFL 105
Query: 3485 PNPIGFSGFSNH---PKGYSS-SVAEAVPSTDTEEDVSVVDEIQVXXXXXXXXXXXXXXL 3318
P+ + +N+ K Y+S + A AV STD EEDVSVVDE+
Sbjct: 106 SRPLIKNQVNNNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAF 165
Query: 3317 NRQNQPKGVGGMGLGKYQYQLLRRRQMKIETQSWDQAAKEYKELLADMCEQKLAPNLPYM 3138
R+ Q GMG KYQ L+RRQ+K+ET++W+QAAKEYKELL DMCEQKLAPNLPY+
Sbjct: 166 RRRKQRMLTSGMGHRKYQ--TLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYV 223
Query: 3137 KSLFLGWFQPLCDCIAQEQELCRQGKHRGAYAPYFDQLPADMMAVITMHKLMGLLMTGGD 2958
KSLFLGWF+PL D IA+EQELC QGK + AYA YF QLPADMMAVITMHKLMGLLMTGGD
Sbjct: 224 KSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGD 283
Query: 2957 PGSTRVVQAACHIGEAIEHEVRIHXXXXXXXXXXXXXXXXXEVEVDPVTKEQEKLRHKVT 2778
G+ RVVQAA IG+AIE EVRIH E + + VT+EQEKLR KVT
Sbjct: 284 HGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKE-DGEHVTQEQEKLRKKVT 342
Query: 2777 DLMKKQKLHQVRLIVRGQDDMKPWGQEAHAKVGCHLIELLMRTAYIQPPVNQLADGPPDI 2598
+LMKKQKL V IVR QDD KPWGQ+A AKVG LI+LL++TAYIQPP NQLA PPDI
Sbjct: 343 NLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDI 402
Query: 2597 RPAFIHSLKMIKKGAMKTGRKLGIIECDPLVRQGLEKTARHMVIPYMPMLVPPINWTGYD 2418
RPAF+HS++ + K R+ GII+CD LV +GLE+TARHMVIPYMPMLVPP+ WTGYD
Sbjct: 403 RPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYD 462
Query: 2417 KGAYLFLPSYCMRTHGARQQREAIKRAPQKQLEHVFEALNTLGNTKWRVNKRMLDVIDRI 2238
KG +L+LPSY MRTHGARQQREA+KRA + QL+ VFEAL+TLGNTKWR+NKR+L V+DRI
Sbjct: 463 KGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRI 522
Query: 2237 WASGGRLADLVDREDVPIPMEPDTEDEPELXXXXXXXXXXXKQNSERHSQRCDVELKLAV 2058
WA GGRLADLVDR+D P+P EPDTEDE K+N ERHSQRCD+ELKLAV
Sbjct: 523 WAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAV 582
Query: 2057 ARQMKDEDGFFYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGNSGLRWLKIH 1878
AR+MKDE+ FFYPHNVDFRGRAYPMHP+LNHLGSD+CRG+LEFAEGRPLG SGLRWLKIH
Sbjct: 583 ARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIH 642
Query: 1877 LANLYAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSE 1698
LANL+AGGV+KLS +GRI FTENH+DDIFDS+D+PLEGRRWWL AEDPFQCLAVCINLSE
Sbjct: 643 LANLFAGGVEKLSLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSE 702
Query: 1697 AFRSSSPQDAVSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARV 1518
A RSSSP+ +VSH+PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARV
Sbjct: 703 AVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARV 762
Query: 1517 LEIMRKDAEKDPVVDPNALRARLLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 1338
L+IM++DA++DP P+A+RAR+L+N VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER
Sbjct: 763 LDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 822
Query: 1337 NALPDE-ELFGAACYAAKTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPYGL 1161
A+ D+ ELFGAACYAAK TLTALGEMF+AARSIM+WLG+CAK+IASEN+PVRWTTP GL
Sbjct: 823 GAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGL 882
Query: 1160 PVVQPYRQLGRHLIKTSLQVLTLKRDTDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACN 981
PVVQPYR++GRHLIKTSLQ+LTL+R+T+K+MVKRQRTAFPPNF+HSLDGSHMMMTAVAC
Sbjct: 883 PVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACR 942
Query: 980 KAGLNFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQQSFPTLTFPPFP 801
+AGLNFAGVHDSYWTHACDVD +NRILREKFVELYE PILE LLESFQ S+PTL FPP P
Sbjct: 943 RAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLP 1002
Query: 800 ERGDFDLKEVLESPYFFN 747
ERGDFD+++VLESPYFFN
Sbjct: 1003 ERGDFDMRDVLESPYFFN 1020
>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial; AltName:
Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 2B; Flags: Precursor
gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
RNA polymerase [Nicotiana tabacum]
Length = 1021
Score = 1389 bits (3594), Expect = 0.0
Identities = 708/1040 (68%), Positives = 816/1040 (78%), Gaps = 18/1040 (1%)
Frame = -2
Query: 3812 MTSYRTIIFSANLTNKFNLSISIDKPSLIIFHPISSKQKSTVMWRRVVKQIASSRKLMRF 3633
M+S +T I N+F DKP+ + I+ S +MWR ++KQ++S R
Sbjct: 1 MSSTKTPISLTIKLNQFT-----DKPTGL---DINRYHNSPIMWRNIIKQLSS-----RT 47
Query: 3632 SQSTIFQEKTRPFEL---------KNGVNFRSFEMGICQN--------GKILFGEEDMGR 3504
Q +F K R + K+ FRS C N G+ L G+E + R
Sbjct: 48 PQKLLFSSKNRTYSFLGFGQDSVFKDNTKFRSLIPISCSNIVMGFQNLGEYLPGDEFLSR 107
Query: 3503 PGFRCFPNPIGFSGFSNHPKGYSSSVAEAVPSTDTEEDVSVVDEIQVXXXXXXXXXXXXX 3324
P + N + + F S + A AV STD EEDVSVVDE+Q
Sbjct: 108 PLLK---NQVNSNDFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVQELLTELKKEEKKQF 164
Query: 3323 XLNRQNQPKGVGGMGLGKYQYQLLRRRQMKIETQSWDQAAKEYKELLADMCEQKLAPNLP 3144
R+ Q GMG KYQ L+RRQ+K+ET++W+QAAKEYKELL DMCEQKLAPNLP
Sbjct: 165 AFRRRKQRMLTSGMGHRKYQ--TLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLP 222
Query: 3143 YMKSLFLGWFQPLCDCIAQEQELCRQGKHRGAYAPYFDQLPADMMAVITMHKLMGLLMTG 2964
Y+KSLFLGWF+PL D IA+EQELC QGK + AYA Y QLPADMMAVITMHKLMGLLMTG
Sbjct: 223 YVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTG 282
Query: 2963 GDPGSTRVVQAACHIGEAIEHEVRIHXXXXXXXXXXXXXXXXXEVEVDPVTKEQEKLRHK 2784
GD G+ RVVQAA IG+AIE EVRIH E + + VT+EQEKLR K
Sbjct: 283 GDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKE-DGEHVTQEQEKLRKK 341
Query: 2783 VTDLMKKQKLHQVRLIVRGQDDMKPWGQEAHAKVGCHLIELLMRTAYIQPPVNQLADGPP 2604
VT+LMKKQKL V IVR QDD KPWGQ+A AKVG LIELL++TAYIQPP NQLA PP
Sbjct: 342 VTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPP 401
Query: 2603 DIRPAFIHSLKMIKKGAMKTGRKLGIIECDPLVRQGLEKTARHMVIPYMPMLVPPINWTG 2424
DIRPAF+HS++ + K R+ GII+CD LV +GLE+TARHMVIPYMPMLVPP+ WTG
Sbjct: 402 DIRPAFLHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTG 461
Query: 2423 YDKGAYLFLPSYCMRTHGARQQREAIKRAPQKQLEHVFEALNTLGNTKWRVNKRMLDVID 2244
YDKG +L+LPSY MRTHGARQQREA+KRA + QL+ VFEAL+TLG+TKWR+NKR+L VID
Sbjct: 462 YDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVID 521
Query: 2243 RIWASGGRLADLVDREDVPIPMEPDTEDEPELXXXXXXXXXXXKQNSERHSQRCDVELKL 2064
RIWA GGRLADLVDR+D P+P EPDTEDE K+N ERHSQRCD+ELKL
Sbjct: 522 RIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKL 581
Query: 2063 AVARQMKDEDGFFYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGNSGLRWLK 1884
AVAR+MKDE+GFFYPHNVDFRGRAYPMHP+LNHLGSD+CRG+L FAEGRPLG SGLRWLK
Sbjct: 582 AVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLVFAEGRPLGESGLRWLK 641
Query: 1883 IHLANLYAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINL 1704
IHLANL+AGGV+KLS +GRIAFTENH+DDIFDSAD+PLEGRRWWL AEDPFQCLAVCINL
Sbjct: 642 IHLANLFAGGVEKLSLEGRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINL 701
Query: 1703 SEAFRSSSPQDAVSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAA 1524
SEA RSSSP+ ++SH+PVHQDGSCNGLQHYAALGRD+LGAAAVNLVAGEKPADVYSGIAA
Sbjct: 702 SEAVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIAA 761
Query: 1523 RVLEIMRKDAEKDPVVDPNALRARLLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 1344
RVL+IM++DA++DP P+A+RAR L+N VDRKLVKQTVMTSVYGVTYIGARDQIKRRLK
Sbjct: 762 RVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLK 821
Query: 1343 ERNALPDE-ELFGAACYAAKTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPY 1167
ER A+ D+ ELFGAACYAAK TLTALGEMF+AARSIM+WLG+CAK+IASEN+PVRWTTP
Sbjct: 822 ERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPL 881
Query: 1166 GLPVVQPYRQLGRHLIKTSLQVLTLKRDTDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVA 987
GLPVVQPYR++GRHLIKTSLQ+LTL+++T+K+MVKRQRTAFPPNF+HSLDGSHMMMTAVA
Sbjct: 882 GLPVVQPYRKIGRHLIKTSLQILTLQQETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVA 941
Query: 986 CNKAGLNFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQQSFPTLTFPP 807
C +AGLNFAGVHDSYWTHACDVD +NRILREKFVELYETPILE LLESFQ S+PTL FPP
Sbjct: 942 CRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLESFQTSYPTLLFPP 1001
Query: 806 FPERGDFDLKEVLESPYFFN 747
PERGDFDL++VLESPYFFN
Sbjct: 1002 LPERGDFDLRDVLESPYFFN 1021
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 1B; Flags: Precursor
Length = 1002
Score = 1387 bits (3589), Expect = 0.0
Identities = 689/966 (71%), Positives = 792/966 (81%), Gaps = 4/966 (0%)
Frame = -2
Query: 3632 SQSTIFQEKTRPFELKNGV---NFRSFEMGICQNGKILFGEEDMGRPGFRCFPNPIGFSG 3462
SQ++IF +R G+ + ++ +G+ QN + D G R SG
Sbjct: 54 SQNSIFSRISRKVRHLEGICEESSKNPHLGLSQNSTFSSVKGDFRICGKRG-------SG 106
Query: 3461 FSNHPKGYSSSVAEAVPSTDTEEDVSVVDEIQVXXXXXXXXXXXXXXLNRQNQPKGVGGM 3282
+ Y S+ AEA+ ST E+ +DEIQ + QPK +GGM
Sbjct: 107 SLGRLRSYGSA-AEAIVSTSEED----IDEIQELIEEMDKENEALKANLQPKQPKTIGGM 161
Query: 3281 GLGKYQYQLLRRRQMKIETQSWDQAAKEYKELLADMCEQKLAPNLPYMKSLFLGWFQPLC 3102
G+GKY + LRRRQ+K+ET++W++AAKEY+ELL DMCEQKLAPNLPYMKSLFLGWF+PL
Sbjct: 162 GVGKYNF--LRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLR 219
Query: 3101 DCIAQEQELCRQGKHRGAYAPYFDQLPADMMAVITMHKLMGLLMTGGDPGSTRVVQAACH 2922
D IA EQ+LC +GK+RGAYAP+FDQLPA+MMAVITMHKLMGLLMTGG GS RVVQAA +
Sbjct: 220 DAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASY 279
Query: 2921 IGEAIEHEVRIHXXXXXXXXXXXXXXXXXEVEVDPVTKEQEKLRHKVTDLMKKQKLHQVR 2742
IGEAIEHE RIH E D + KE+E+LR KV LMKKQKL QVR
Sbjct: 280 IGEAIEHEARIHRFLEKTKKSNALSGDLEETPGD-MMKERERLRKKVKILMKKQKLRQVR 338
Query: 2741 LIVRGQDDMKPWGQEAHAKVGCHLIELLMRTAYIQPPVNQLADGPPDIRPAFIHSLKMIK 2562
IV+ QDD KPWGQ+ KVGC LI++LM TAYIQPP +QL DGPPDIRPAF+H+LK ++
Sbjct: 339 KIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVE 398
Query: 2561 KGAMKTGRKLGIIECDPLVRQGLEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYCM 2382
MK R+ G+I+CDPLVR+GL+KTARHMVIPYMPMLVPP +W GYDKG YLFLPSY M
Sbjct: 399 --TMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIM 456
Query: 2381 RTHGARQQREAIKRAPQKQLEHVFEALNTLGNTKWRVNKRMLDVIDRIWASGGRLADLVD 2202
RTHGA+QQREA+KR P+KQLE VF+AL+TLGNTKWRVN+++L ++DRIWASGGRLADLVD
Sbjct: 457 RTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVD 516
Query: 2201 REDVPIPMEPDTEDEPELXXXXXXXXXXXKQNSERHSQRCDVELKLAVARQMKDEDGFFY 2022
REDVP+P PDTEDE E+ K+N ERHSQRCD+ELKLAVAR+MKDEDGF+Y
Sbjct: 517 REDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYY 576
Query: 2021 PHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGNSGLRWLKIHLANLYAGGVDKL 1842
PHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGLRWLKIHLAN+Y GGVDKL
Sbjct: 577 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKL 636
Query: 1841 SYDGRIAFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEAFRSSSPQDAVS 1662
SY+GR+AF+ENHL+DIFDSA+RPLEG+RWWLGAEDPFQCLA CIN++EA RS SP+ A+S
Sbjct: 637 SYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAIS 696
Query: 1661 HMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLEIMRKDAEKDP 1482
+MP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVYSGIAARVL+IM++DA KDP
Sbjct: 697 YMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDP 756
Query: 1481 VVDPNALRARLLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNALPDE-ELFGA 1305
DPN +RARLLIN VDRKLVKQTVMTSVYGVTYIGARDQIK+RLKER + D+ ELF A
Sbjct: 757 ANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAA 816
Query: 1304 ACYAAKTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPYGLPVVQPYRQLGRH 1125
ACYAAKTTLTALGEMF+AARSIMSWLGDCAK+IA EN PVRWTTP GLPVVQPYR+LGRH
Sbjct: 817 ACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRH 876
Query: 1124 LIKTSLQVLTLKRDTDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDS 945
LIKTSLQ+LTL+R+TDK+MVKRQRTAFPPNFVHSLDGSHMMMTA+AC ++GL+FAGVHDS
Sbjct: 877 LIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDS 936
Query: 944 YWTHACDVDVMNRILREKFVELYETPILENLLESFQQSFPTLTFPPFPERGDFDLKEVLE 765
YWTHACDVD MN+ILREKFVELY+ PILENLLESFQQSFP L FPP PERGDFDL+EVLE
Sbjct: 937 YWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLE 996
Query: 764 SPYFFN 747
SPYFFN
Sbjct: 997 SPYFFN 1002
>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris] gi|17221595|dbj|BAB78465.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 1386 bits (3588), Expect = 0.0
Identities = 705/1038 (67%), Positives = 819/1038 (78%), Gaps = 16/1038 (1%)
Frame = -2
Query: 3812 MTSYRTIIFSANLTNKFNLSISIDKPSLIIFHPISSKQKSTVMWRRVVKQIASSRKLMRF 3633
M+S +T I N+F DKP+ + +P + S +MWR ++KQ++S R
Sbjct: 1 MSSTKTPISLTIKLNQFT-----DKPTGLDINPYHN---SPIMWRNIIKQLSS-----RT 47
Query: 3632 SQSTIFQEKTRPFEL---------KNGVNFRSFEMGICQNGKILFGEEDMGR--PGFRCF 3486
Q +F K R + K+ FRS C N I+ G +++G PG
Sbjct: 48 PQKLLFSSKNRTYSFLGFGQDSIFKDNTKFRSLIPISCSN--IVMGFQNLGEYLPGDEFL 105
Query: 3485 PNPIGFSGFSNH---PKGYSS-SVAEAVPSTDTEEDVSVVDEIQVXXXXXXXXXXXXXXL 3318
P+ + +N+ K Y+S + A AV STD EEDVSVVDE+
Sbjct: 106 SRPLIKNQVNNNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAF 165
Query: 3317 NRQNQPKGVGGMGLGKYQYQLLRRRQMKIETQSWDQAAKEYKELLADMCEQKLAPNLPYM 3138
R+ Q GMG KYQ L+RRQ+K+ET++W+QAAKEYKELL DMCEQKLAPNLPY+
Sbjct: 166 RRRKQRMLTSGMGHRKYQ--TLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYV 223
Query: 3137 KSLFLGWFQPLCDCIAQEQELCRQGKHRGAYAPYFDQLPADMMAVITMHKLMGLLMTGGD 2958
KSLFLGWF+PL D IA+EQELC QGK + AYA YF QLPADMMAVITMHKLMGLLMTGGD
Sbjct: 224 KSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGD 283
Query: 2957 PGSTRVVQAACHIGEAIEHEVRIHXXXXXXXXXXXXXXXXXEVEVDPVTKEQEKLRHKVT 2778
G+ RVVQAA IG+AIE EVRIH E + + VT+EQEKLR KVT
Sbjct: 284 HGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKE-DGEHVTQEQEKLRKKVT 342
Query: 2777 DLMKKQKLHQVRLIVRGQDDMKPWGQEAHAKVGCHLIELLMRTAYIQPPVNQLADGPPDI 2598
+LMKKQKL V IVR QDD KPWGQ+A AKVG LI+LL++TAYIQPP NQLA PPDI
Sbjct: 343 NLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDI 402
Query: 2597 RPAFIHSLKMIKKGAMKTGRKLGIIECDPLVRQGLEKTARHMVIPYMPMLVPPINWTGYD 2418
PAF+HS++ + K R+ GII+CD LV +GLE+TARHMVIPYMPMLVPP+ WTGYD
Sbjct: 403 PPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYD 462
Query: 2417 KGAYLFLPSYCMRTHGARQQREAIKRAPQKQLEHVFEALNTLGNTKWRVNKRMLDVIDRI 2238
KG +L+LPSY MRTHGARQQREA+KRA + QL+ VFEAL+TLGNTKWR+NKR+L V+DRI
Sbjct: 463 KGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRI 522
Query: 2237 WASGGRLADLVDREDVPIPMEPDTEDEPELXXXXXXXXXXXKQNSERHSQRCDVELKLAV 2058
WA GGRLADLVDR+D P+P EPDTEDE L K+N ERHSQRCD+ELKLAV
Sbjct: 523 WAGGGRLADLVDRDDAPLPEEPDTEDEALLPKWRWKVKSVKKENRERHSQRCDIELKLAV 582
Query: 2057 ARQMKDEDGFFYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGNSGLRWLKIH 1878
AR+MKDE+ FFYPHNVDFRGRAYPMHP+LNHLGSD+CRG+LEFAEGRPLG SGLRWLKIH
Sbjct: 583 ARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIH 642
Query: 1877 LANLYAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSE 1698
LANL+AGGV+KLS +GRI FTENH+DDIFDS+D+PLEGRRWWL AEDPFQCLAVCINLSE
Sbjct: 643 LANLFAGGVEKLSLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSE 702
Query: 1697 AFRSSSPQDAVSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARV 1518
A RSSSP+ +VSH+PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPA+ YSGIAARV
Sbjct: 703 AVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPAEAYSGIAARV 762
Query: 1517 LEIMRKDAEKDPVVDPNALRARLLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 1338
L+IM++DA++DP P+A+RAR+L+N VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER
Sbjct: 763 LDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 822
Query: 1337 NALPDE-ELFGAACYAAKTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPYGL 1161
A+ D+ ELFGAACYAAK TLTALGEMF+AARSIM+WLG+CAK+IASEN+PVRWTTP GL
Sbjct: 823 GAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGL 882
Query: 1160 PVVQPYRQLGRHLIKTSLQVLTLKRDTDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACN 981
PVVQPYR++GRHLIKTSLQ+LTL+R+T+K+MVKRQRTAFPPNF+HSLDGSHMMMTAVAC
Sbjct: 883 PVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACR 942
Query: 980 KAGLNFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESFQQSFPTLTFPPFP 801
+AGLNFAGVHDSYWTHACDVD +NRILREKFVELYE PILE LLESFQ S+PTL FPP P
Sbjct: 943 RAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLP 1002
Query: 800 ERGDFDLKEVLESPYFFN 747
ERGDFD+++VLESPYFFN
Sbjct: 1003 ERGDFDMRDVLESPYFFN 1020
>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
lycopersicum]
Length = 993
Score = 1386 bits (3588), Expect = 0.0
Identities = 704/1004 (70%), Positives = 801/1004 (79%), Gaps = 24/1004 (2%)
Frame = -2
Query: 3686 MWRRVVKQIASSRKLMRFSQSTIFQ-----EKTRPFELKNGVNFRSFEMGICQ------- 3543
MWR + KQ+ S RKL S KTRP + +R+ +G+ Q
Sbjct: 1 MWRYISKQVYS-RKLRNTHDSDFLGFAQSFRKTRPLQGLCEEGYRNPNLGVSQSSIFSRV 59
Query: 3542 NGK--ILFGE-EDMGRPGFRCFPNPIGFSGFSNHPKGYSS--------SVAEAVPSTDTE 3396
NGK L G ED R + F FS + S S AEA+ ST E
Sbjct: 60 NGKSRCLDGMCEDSCRNHYLGFSESSIFSRVKGDFRVCGSLGVLRSYGSAAEAIASTSEE 119
Query: 3395 EDVSVVDEIQVXXXXXXXXXXXXXXLNRQNQPKGVGGMGLGKYQYQLLRRRQMKIETQSW 3216
+ +DEIQ + QPK VGGMG+GKY LLRRRQ+K+ET++W
Sbjct: 120 D----IDEIQELIEEMNKENEALKTNLQPKQPKTVGGMGIGKYN--LLRRRQIKVETEAW 173
Query: 3215 DQAAKEYKELLADMCEQKLAPNLPYMKSLFLGWFQPLCDCIAQEQELCRQGKHRGAYAPY 3036
+ AAKEY+ELL DMCEQKLAPNLPY+KSLFLGWF+PL D IA EQ+LC +GK+RGAYAP+
Sbjct: 174 EDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLKDAIAAEQKLCDEGKNRGAYAPF 233
Query: 3035 FDQLPADMMAVITMHKLMGLLMTGGDPGSTRVVQAACHIGEAIEHEVRIHXXXXXXXXXX 2856
FDQLPA+MMAVITMHKLMGLLMTGG GS RVVQAA HIGEAIEHE RIH
Sbjct: 234 FDQLPAEMMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEKTKKNA 293
Query: 2855 XXXXXXXEVEVDPVTKEQEKLRHKVTDLMKKQKLHQVRLIVRGQDDMKPWGQEAHAKVGC 2676
+ KE+E+LR KV LMKKQKL QVR IV+ QDD KPWGQ+ KVGC
Sbjct: 294 LDGSLEETA--GDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKVGC 351
Query: 2675 HLIELLMRTAYIQPPVNQLADGPPDIRPAFIHSLKMIKKGAMKTGRKLGIIECDPLVRQG 2496
LI++L+ TAYIQPP +QL D PPDIRPAF+H+LK + +K R+ G+I+CDPLVR+G
Sbjct: 352 RLIQILIETAYIQPPNDQLEDCPPDIRPAFMHTLKTVD--TVKGSRRYGVIQCDPLVRKG 409
Query: 2495 LEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYCMRTHGARQQREAIKRAPQKQLEH 2316
L+KTARHMVIPYMPMLVPP NW+GYD+GAYLFLPSY MRTHGA+QQREA+KR P+KQLE
Sbjct: 410 LDKTARHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEP 469
Query: 2315 VFEALNTLGNTKWRVNKRMLDVIDRIWASGGRLADLVDREDVPIPMEPDTEDEPELXXXX 2136
VF+AL+TLGNTKWRVNKR+L ++DRIWASGGRLADLVDREDVP+P EPDTE+E E+
Sbjct: 470 VFQALDTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDVPLPEEPDTENEEEIKKWK 529
Query: 2135 XXXXXXXKQNSERHSQRCDVELKLAVARQMKDEDGFFYPHNVDFRGRAYPMHPYLNHLGS 1956
K+N ERHSQRCD+ELKLAVAR+MKDE+GF+YPHN+DFRGRAYPMHPYLNHLGS
Sbjct: 530 WKVKAAKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGS 589
Query: 1955 DLCRGILEFAEGRPLGNSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLDDIFDSADR 1776
DLCRGILEF+EGRPLG SGLRWLKIHLAN+Y GGVDKLS +GR AF+ENH++DIFDSADR
Sbjct: 590 DLCRGILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSCEGRAAFSENHVEDIFDSADR 649
Query: 1775 PLEGRRWWLGAEDPFQCLAVCINLSEAFRSSSPQDAVSHMPVHQDGSCNGLQHYAALGRD 1596
PLEGRRWWLGAEDPFQCLA CI++SEA RS SP+ ++SHMP+HQDGSCNGLQHYAALGRD
Sbjct: 650 PLEGRRWWLGAEDPFQCLATCISISEALRSPSPETSISHMPIHQDGSCNGLQHYAALGRD 709
Query: 1595 KLGAAAVNLVAGEKPADVYSGIAARVLEIMRKDAEKDPVVDPNALRARLLINHVDRKLVK 1416
KLGAAAVNLVAG+KPADVYSGIAARVL+IM++DA+KDP DPN +RARLLIN VDRKLVK
Sbjct: 710 KLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMRARLLINQVDRKLVK 769
Query: 1415 QTVMTSVYGVTYIGARDQIKRRLKERNALPDE-ELFGAACYAAKTTLTALGEMFQAARSI 1239
QTVMTSVYGVTYIGARDQIKRRLKER A+ D+ ELF AACYAAKTTLTALGEMF+AARSI
Sbjct: 770 QTVMTSVYGVTYIGARDQIKRRLKERGAIEDDNELFAAACYAAKTTLTALGEMFEAARSI 829
Query: 1238 MSWLGDCAKVIASENQPVRWTTPYGLPVVQPYRQLGRHLIKTSLQVLTLKRDTDKIMVKR 1059
MSWLGDCAK+IA ENQPVRWTTP GLPVVQPYR+LGRHLIKTSLQ+LTL+R+TDK+MVKR
Sbjct: 830 MSWLGDCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKR 889
Query: 1058 QRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDVMNRILREKFVEL 879
QRTAFPPNFVHSLDGSHMMMTA+AC +AGL+FAGVHDSYWTHA DVD MN+ILREKFVEL
Sbjct: 890 QRTAFPPNFVHSLDGSHMMMTAIACKEAGLSFAGVHDSYWTHASDVDQMNKILREKFVEL 949
Query: 878 YETPILENLLESFQQSFPTLTFPPFPERGDFDLKEVLESPYFFN 747
Y+ PILENLLESFQQSFP L FPP PERGDFDL+EVLESPYFFN
Sbjct: 950 YDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993
>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Citrus sinensis]
Length = 1026
Score = 1385 bits (3585), Expect = 0.0
Identities = 701/999 (70%), Positives = 802/999 (80%), Gaps = 11/999 (1%)
Frame = -2
Query: 3710 SSKQKSTVMWRRVVKQIASSRKLMRFSQSTIFQEKTRPFELKNGVNFRSFEM-------- 3555
S ++ S+VMWR V KQ S FS++ F ++ L+ V F +M
Sbjct: 39 SPEKISSVMWRNVAKQAISLHLKKPFSRAYSFLGISQDSILREKVKFGCLDMVPRGIHEV 98
Query: 3554 GICQNGKILFGEEDMGRPGFRCFPNPIGFSGFSNHPKGYSSSVAEAVPSTDTEEDVSVVD 3375
G + G+IL E+ MGR F N + P+GY++ VAEAV STD EEDVS+V+
Sbjct: 99 GSGRIGEILNHEDYMGRTSFGVLKNDNFWC-----PRGYAT-VAEAVSSTDVEEDVSIVE 152
Query: 3374 EIQVXXXXXXXXXXXXXXLNRQNQPKGVGGMGLGKYQYQLLRRRQMKIETQSWDQAAKEY 3195
EIQ NR+ +G MG GKY+ +L+ RQ+KIET++W++AA EY
Sbjct: 153 EIQELLQEMKKEQQSGGGRNRRRVARG---MGSGKYR--MLKMRQVKIETEAWEKAANEY 207
Query: 3194 KELLADMCEQKLAPNLPYMKSLFLGWFQPLCDCIAQEQELCRQGKHRGAYAPYFDQLPAD 3015
+ELL DMCEQKLAPNLPYMKSLFLGWF+PL D IA+EQE CR KH+ AYAPYFDQLPAD
Sbjct: 208 RELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPAD 267
Query: 3014 MMAVITMHKLMGLLMTGGDPGSTRVVQAACHIGEAIEHEVRIHXXXXXXXXXXXXXXXXX 2835
MMAVITMHKLMGLLMTGG+ G RVVQAAC IG+AIE EVRIH
Sbjct: 268 MMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKED 327
Query: 2834 EV--EVDPVTKEQEKLRHKVTDLMKKQKLHQVRLIVRGQDDMKPWGQEAHAKVGCHLIEL 2661
E E + VT EQEKLR KVTDL+KKQKL VR IV+GQDD KPWGQ+A AKVG +IEL
Sbjct: 328 EEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKPWGQDARAKVGSRVIEL 387
Query: 2660 LMRTAYIQPPVNQLADGPPDIRPAFIHSLKMIKKGAMKTGRKLGIIECDPLVRQGLEKTA 2481
L +TAYIQ P +QLAD PPDI PAF H+L+ + K +K G+IEC+PLV +GLE+TA
Sbjct: 388 LTQTAYIQSPADQLADAPPDIFPAFTHALRTVSKETKGGSKKYGVIECNPLVLKGLERTA 447
Query: 2480 RHMVIPYMPMLVPPINWTGYDKGAYLFLPSYCMRTHGARQQREAIKRAPQKQLEHVFEAL 2301
RHMVIPYMPMLVPP+ WTGYDKGA+ FLPSY MRTHGA+QQR+ +KR P+KQLE VFEAL
Sbjct: 448 RHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYVMRTHGAKQQRDTVKRTPKKQLEPVFEAL 507
Query: 2300 NTLGNTKWRVNKRMLDVIDRIWASGGRLADLVDREDVPIPMEPDTEDEPELXXXXXXXXX 2121
+TLGNTKWRVN R+L V+DRIW+ GGRLADLVDR DVP+P +P+TEDE +L
Sbjct: 508 DTLGNTKWRVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEKPETEDEAQLRKWQWKVRN 567
Query: 2120 XXKQNSERHSQRCDVELKLAVARQMKDEDGFFYPHNVDFRGRAYPMHPYLNHLGSDLCRG 1941
K+N ERHSQRCD+ELKL+VAR+MKDE+GF+YPHNVDFRGRAYPMHPYLNHLGSDLCRG
Sbjct: 568 VKKENRERHSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRG 627
Query: 1940 ILEFAEGRPLGNSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEGR 1761
ILEFAEGR LG SGL WLKIHLANLYAGGVDKLS++GR+AFTENHLDDIFDSAD+PLEGR
Sbjct: 628 ILEFAEGRTLGKSGLHWLKIHLANLYAGGVDKLSHEGRLAFTENHLDDIFDSADKPLEGR 687
Query: 1760 RWWLGAEDPFQCLAVCINLSEAFRSSSPQDAVSHMPVHQDGSCNGLQHYAALGRDKLGAA 1581
RWWL AEDPFQCLAVCINL+EA RSSSP+ +SH+PVHQDGSCNGLQHYAALGRD LGAA
Sbjct: 688 RWWLKAEDPFQCLAVCINLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDTLGAA 747
Query: 1580 AVNLVAGEKPADVYSGIAARVLEIMRKDAEKDPVVDPNALRARLLINHVDRKLVKQTVMT 1401
AVNLVA EKPADVYSGIAARVL I+++DA++DP V P+ALRA+LL++ VDRKLVKQTVMT
Sbjct: 748 AVNLVAREKPADVYSGIAARVLVIIQRDAQRDPAVFPDALRAKLLLSQVDRKLVKQTVMT 807
Query: 1400 SVYGVTYIGARDQIKRRLKERNA-LPDEELFGAACYAAKTTLTALGEMFQAARSIMSWLG 1224
SVYGVTYIGARDQIKRRLKER A + + ELFGA+CYAAK TLTALGEMFQAAR IMSWLG
Sbjct: 808 SVYGVTYIGARDQIKRRLKERGAPMEEAELFGASCYAAKVTLTALGEMFQAARGIMSWLG 867
Query: 1223 DCAKVIASENQPVRWTTPYGLPVVQPYRQLGRHLIKTSLQVLTLKRDTDKIMVKRQRTAF 1044
+CAK+IASENQPVRWTTP GLPVVQPYR+LGRH +KTSLQ+LTL+R+T+K+MVKRQRTAF
Sbjct: 868 ECAKIIASENQPVRWTTPLGLPVVQPYRKLGRHTVKTSLQILTLQRETEKVMVKRQRTAF 927
Query: 1043 PPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDVMNRILREKFVELYETPI 864
PPNFVHSLDGSHMMMTAVAC KAGL FAGVHDSYWTHACDVD MNRILREKFVELYE PI
Sbjct: 928 PPNFVHSLDGSHMMMTAVACRKAGLTFAGVHDSYWTHACDVDEMNRILREKFVELYEMPI 987
Query: 863 LENLLESFQQSFPTLTFPPFPERGDFDLKEVLESPYFFN 747
LENLL+SFQ+SFP L FPP PERGDFDL+EVL SPYFFN
Sbjct: 988 LENLLDSFQKSFPKLVFPPLPERGDFDLREVLGSPYFFN 1026
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 1385 bits (3584), Expect = 0.0
Identities = 688/966 (71%), Positives = 792/966 (81%), Gaps = 4/966 (0%)
Frame = -2
Query: 3632 SQSTIFQEKTRPFELKNGV---NFRSFEMGICQNGKILFGEEDMGRPGFRCFPNPIGFSG 3462
SQ++IF +R G+ + ++ +G+ QN + D G R SG
Sbjct: 54 SQNSIFSRISRKVRHLEGICEESSKNPHLGLSQNSTFSSVKGDFRICGKRG-------SG 106
Query: 3461 FSNHPKGYSSSVAEAVPSTDTEEDVSVVDEIQVXXXXXXXXXXXXXXLNRQNQPKGVGGM 3282
+ Y S+ AEA+ ST E+ +DEIQ + QPK +GGM
Sbjct: 107 SLGRLRSYGSA-AEAIVSTSEED----IDEIQELIEEMDKENEALKANLQPKQPKTIGGM 161
Query: 3281 GLGKYQYQLLRRRQMKIETQSWDQAAKEYKELLADMCEQKLAPNLPYMKSLFLGWFQPLC 3102
G+GKY + LRRRQ+K+ET++W++AAKEY+ELL DMCEQKLAPNLPYMKSLFLGWF+PL
Sbjct: 162 GVGKYNF--LRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLR 219
Query: 3101 DCIAQEQELCRQGKHRGAYAPYFDQLPADMMAVITMHKLMGLLMTGGDPGSTRVVQAACH 2922
D IA EQ+LC +GK+RGAYAP+FDQLPA+MMAVITMHKLMGLLMTGG GS RVVQAA +
Sbjct: 220 DAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASY 279
Query: 2921 IGEAIEHEVRIHXXXXXXXXXXXXXXXXXEVEVDPVTKEQEKLRHKVTDLMKKQKLHQVR 2742
IGEAIEHE RIH E D + KE+E+LR KV LMKKQKL QVR
Sbjct: 280 IGEAIEHEARIHRFLEKTKKSNALSGDLEETPGD-MMKERERLRKKVKILMKKQKLRQVR 338
Query: 2741 LIVRGQDDMKPWGQEAHAKVGCHLIELLMRTAYIQPPVNQLADGPPDIRPAFIHSLKMIK 2562
IV+ QDD KPWGQ+ KVGC LI++LM TAYIQPP +QL DGPPDIRPAF+H+LK ++
Sbjct: 339 KIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTVE 398
Query: 2561 KGAMKTGRKLGIIECDPLVRQGLEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYCM 2382
MK R+ G+I+CDPLVR+GL+KTARHMVIPYMPMLVPP +W GYDKG YLFLPSY M
Sbjct: 399 --TMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIM 456
Query: 2381 RTHGARQQREAIKRAPQKQLEHVFEALNTLGNTKWRVNKRMLDVIDRIWASGGRLADLVD 2202
RTHGA+QQREA+KR P+KQLE VF+AL+TLGNTKWRVN+++L +++RIWASGGRLADLVD
Sbjct: 457 RTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVNRIWASGGRLADLVD 516
Query: 2201 REDVPIPMEPDTEDEPELXXXXXXXXXXXKQNSERHSQRCDVELKLAVARQMKDEDGFFY 2022
REDVP+P PDTEDE E+ K+N ERHSQRCD+ELKLAVAR+MKDEDGF+Y
Sbjct: 517 REDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYY 576
Query: 2021 PHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGNSGLRWLKIHLANLYAGGVDKL 1842
PHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGLRWLKIHLAN+Y GGVDKL
Sbjct: 577 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKL 636
Query: 1841 SYDGRIAFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEAFRSSSPQDAVS 1662
SY+GR+AF+ENHL+DIFDSA+RPLEG+RWWLGAEDPFQCLA CIN++EA RS SP+ A+S
Sbjct: 637 SYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAIS 696
Query: 1661 HMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLEIMRKDAEKDP 1482
+MP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAG+KPADVYSGIAARVL+IM++DA KDP
Sbjct: 697 YMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDP 756
Query: 1481 VVDPNALRARLLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNALPDE-ELFGA 1305
DPN +RARLLIN VDRKLVKQTVMTSVYGVTYIGARDQIK+RLKER + D+ ELF A
Sbjct: 757 ANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAA 816
Query: 1304 ACYAAKTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPYGLPVVQPYRQLGRH 1125
ACYAAKTTLTALGEMF+AARSIMSWLGDCAK+IA EN PVRWTTP GLPVVQPYR+LGRH
Sbjct: 817 ACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRH 876
Query: 1124 LIKTSLQVLTLKRDTDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDS 945
LIKTSLQ+LTL+R+TDK+MVKRQRTAFPPNFVHSLDGSHMMMTA+AC ++GL+FAGVHDS
Sbjct: 877 LIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDS 936
Query: 944 YWTHACDVDVMNRILREKFVELYETPILENLLESFQQSFPTLTFPPFPERGDFDLKEVLE 765
YWTHACDVD MN+ILREKFVELY+ PILENLLESFQQSFP L FPP PERGDFDL+EVLE
Sbjct: 937 YWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLE 996
Query: 764 SPYFFN 747
SPYFFN
Sbjct: 997 SPYFFN 1002
>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533045|gb|ESR44228.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 1030
Score = 1382 bits (3578), Expect = 0.0
Identities = 700/1000 (70%), Positives = 801/1000 (80%), Gaps = 12/1000 (1%)
Frame = -2
Query: 3710 SSKQKSTVMWRRVVKQIASSRKLMRFSQSTIFQEKTRPFELKNGVNFRSFEM-------- 3555
S ++ S+VMWR V KQ S FS++ F ++ L+ V F +M
Sbjct: 39 SPEKISSVMWRNVAKQAISLHLKKPFSRAYSFLGISQDSILREKVKFGCLDMVPRGIHEV 98
Query: 3554 GICQNGKILFGEEDMGRPGFRCFPNPIGFSGFSNHPKGYSSSVAEAVPSTDTEEDVSVVD 3375
G + G+IL E+ MGR F N + P+GY++ VAEAV STD EEDVS+V+
Sbjct: 99 GSGRIGEILNHEDYMGRTSFGVLKNDNFWC-----PRGYAT-VAEAVSSTDVEEDVSIVE 152
Query: 3374 EIQ-VXXXXXXXXXXXXXXLNRQNQPKGVGGMGLGKYQYQLLRRRQMKIETQSWDQAAKE 3198
EIQ + +N+ + GMG GKY+ +L+ RQ+KIET++W+QAA E
Sbjct: 153 EIQELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYR--MLKMRQVKIETEAWEQAANE 210
Query: 3197 YKELLADMCEQKLAPNLPYMKSLFLGWFQPLCDCIAQEQELCRQGKHRGAYAPYFDQLPA 3018
Y+ELL DMCEQKLAPNLPYMKSLFLGWF+PL D IA+EQE CR KH+ AYAPYFDQLPA
Sbjct: 211 YRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPA 270
Query: 3017 DMMAVITMHKLMGLLMTGGDPGSTRVVQAACHIGEAIEHEVRIHXXXXXXXXXXXXXXXX 2838
DMMAVITMHKLMGLLMTGG+ G RVVQAAC IG+AIE EVRIH
Sbjct: 271 DMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKE 330
Query: 2837 XEV--EVDPVTKEQEKLRHKVTDLMKKQKLHQVRLIVRGQDDMKPWGQEAHAKVGCHLIE 2664
E E + VT EQEKLR KVTDL+KKQKL VR IV+GQDD KPWGQ+A AKVG +IE
Sbjct: 331 DEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKPWGQDARAKVGSRVIE 390
Query: 2663 LLMRTAYIQPPVNQLADGPPDIRPAFIHSLKMIKKGAMKTGRKLGIIECDPLVRQGLEKT 2484
LL +TAYIQ P +QL D PPDI PAF H+L+ + K +K G+IEC+PLV +GLE+T
Sbjct: 391 LLTQTAYIQSPADQLVDAPPDIFPAFTHTLRTVSKETKGGSKKYGVIECNPLVLKGLERT 450
Query: 2483 ARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYCMRTHGARQQREAIKRAPQKQLEHVFEA 2304
ARHMVIPYMPMLVPP+ WTGYDKGA+ FLPSY MRTHGA+QQR+ +KR P+KQLE VFEA
Sbjct: 451 ARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYVMRTHGAKQQRDTVKRTPKKQLEPVFEA 510
Query: 2303 LNTLGNTKWRVNKRMLDVIDRIWASGGRLADLVDREDVPIPMEPDTEDEPELXXXXXXXX 2124
L+TLGNTKWRVN R+L V+DRIW+ GGRLADLVDR DVP+P +P+TEDE +L
Sbjct: 511 LDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEKPETEDEAQLRKWQWKVR 570
Query: 2123 XXXKQNSERHSQRCDVELKLAVARQMKDEDGFFYPHNVDFRGRAYPMHPYLNHLGSDLCR 1944
K+N ERHSQRCD+ELKL+VAR+MKDE+GF+YPHNVDFRGRAYPMHPYLNHLGSDLCR
Sbjct: 571 NVKKENRERHSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDLCR 630
Query: 1943 GILEFAEGRPLGNSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEG 1764
GILEFAEGR LG SGL WLKIHLANLYAGGVDKLS++GR+AFTENHLDDIFDSAD+PLEG
Sbjct: 631 GILEFAEGRTLGKSGLHWLKIHLANLYAGGVDKLSHEGRLAFTENHLDDIFDSADKPLEG 690
Query: 1763 RRWWLGAEDPFQCLAVCINLSEAFRSSSPQDAVSHMPVHQDGSCNGLQHYAALGRDKLGA 1584
RRWWL AEDPFQCLAVCINL+EA RSSSP+ +SH+PVHQDGSCNGLQHYAALGRD LGA
Sbjct: 691 RRWWLKAEDPFQCLAVCINLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDTLGA 750
Query: 1583 AAVNLVAGEKPADVYSGIAARVLEIMRKDAEKDPVVDPNALRARLLINHVDRKLVKQTVM 1404
AAVNLVA EKPADVYSGIAARVL I+R+DA++DP V P+ALRA+LL++ VDRKLVKQTVM
Sbjct: 751 AAVNLVAREKPADVYSGIAARVLVIIRRDAQRDPAVFPDALRAKLLLSQVDRKLVKQTVM 810
Query: 1403 TSVYGVTYIGARDQIKRRLKERNA-LPDEELFGAACYAAKTTLTALGEMFQAARSIMSWL 1227
TSVYGVTYIGARDQIKRRLKER A + + ELFGA+CYAAK TLTALGEMFQAAR IMSWL
Sbjct: 811 TSVYGVTYIGARDQIKRRLKERGAPMEEAELFGASCYAAKVTLTALGEMFQAARGIMSWL 870
Query: 1226 GDCAKVIASENQPVRWTTPYGLPVVQPYRQLGRHLIKTSLQVLTLKRDTDKIMVKRQRTA 1047
G+CAK+IASENQPVRWTTP GLPVVQPYR+LGRH +KTSLQ+LTL+R+T+K+MVKRQRTA
Sbjct: 871 GECAKIIASENQPVRWTTPLGLPVVQPYRKLGRHTVKTSLQILTLQRETEKVMVKRQRTA 930
Query: 1046 FPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDVMNRILREKFVELYETP 867
FPPNFVHSLDGSHMMMTAVAC KAGL FAGVHDSYWTHACDVD MNRILREKFVELYE P
Sbjct: 931 FPPNFVHSLDGSHMMMTAVACRKAGLTFAGVHDSYWTHACDVDEMNRILREKFVELYEMP 990
Query: 866 ILENLLESFQQSFPTLTFPPFPERGDFDLKEVLESPYFFN 747
ILENLL+SFQ+SFP L PP PERGDFDL+EVL SPYFFN
Sbjct: 991 ILENLLDSFQKSFPKLVLPPLPERGDFDLREVLGSPYFFN 1030
>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 1; Flags: Precursor
gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
subunit RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 1380 bits (3573), Expect = 0.0
Identities = 699/1013 (69%), Positives = 804/1013 (79%), Gaps = 33/1013 (3%)
Frame = -2
Query: 3686 MWRRVVKQIASSRK--------LMRFSQSTIFQEKTRPFELKNGVNFRSFEMGICQNG-- 3537
MWR + KQ A SRK L+ FSQ + KTRP + + + +G+ QN
Sbjct: 1 MWRYISKQ-AYSRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTNPNLGLSQNSIF 59
Query: 3536 -------KILFG--EEDMGRPGFRCFPNPIGFS-------------GFSNHPKGYSSSVA 3423
+ L G EE P N + S G + Y S+ A
Sbjct: 60 SRISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRSYGSA-A 118
Query: 3422 EAVPSTDTEEDVSVVDEIQVXXXXXXXXXXXXXXLNRQNQPKGVGGMGLGKYQYQLLRRR 3243
EA+ ST E+ +DEIQ + QPK +GGMG+GKY LLRRR
Sbjct: 119 EAIASTSEED----IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYN--LLRRR 172
Query: 3242 QMKIETQSWDQAAKEYKELLADMCEQKLAPNLPYMKSLFLGWFQPLCDCIAQEQELCRQG 3063
Q+K+ET++W++AAKEY+ELL DMCEQKLAPNLPYMKSLFLGWF+PL D IA EQ+LC +G
Sbjct: 173 QIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEG 232
Query: 3062 KHRGAYAPYFDQLPADMMAVITMHKLMGLLMTGGDPGSTRVVQAACHIGEAIEHEVRIHX 2883
K+RGAYAP+FDQLPA+MMAVITMHKLMGLLMTGG GS RVVQAA HIGEAIEHE RIH
Sbjct: 233 KNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHR 292
Query: 2882 XXXXXXXXXXXXXXXXEVEVDPVTKEQEKLRHKVTDLMKKQKLHQVRLIVRGQDDMKPWG 2703
+ D + KE+E++R KV LMKKQKL QVR IV+ QDD KPWG
Sbjct: 293 FLEKTKKSNALSGDLEDTPGD-IMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWG 351
Query: 2702 QEAHAKVGCHLIELLMRTAYIQPPVNQLADGPPDIRPAFIHSLKMIKKGAMKTGRKLGII 2523
Q+ KVGC LI++LM TAYIQPP +QL D PPDIRPAF+H+LK ++ MK R+ G+I
Sbjct: 352 QDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVE--TMKGSRRYGVI 409
Query: 2522 ECDPLVRQGLEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYCMRTHGARQQREAIK 2343
+CDPLVR+GL+KTARHMVIPYMPMLVPP +W GYDKGAYLFLPSY MRTHGA+QQREA+K
Sbjct: 410 QCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVK 469
Query: 2342 RAPQKQLEHVFEALNTLGNTKWRVNKRMLDVIDRIWASGGRLADLVDREDVPIPMEPDTE 2163
R P+KQLE VF+AL+TLGNTKWR+N+++L ++DRIWASGGRLADLVDREDVP+P EPD E
Sbjct: 470 RVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAE 529
Query: 2162 DEPELXXXXXXXXXXXKQNSERHSQRCDVELKLAVARQMKDEDGFFYPHNVDFRGRAYPM 1983
DE ++ K+N ERHSQRCD+ELKLAVAR+MKDEDGF+YPHN+DFRGRAYPM
Sbjct: 530 DEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPM 589
Query: 1982 HPYLNHLGSDLCRGILEFAEGRPLGNSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHL 1803
HPYLNHLGSDLCRGILEFAEGRPLG SGLRWLKIHLAN+Y GGVDKLSY+GR+AF+ENH+
Sbjct: 590 HPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHV 649
Query: 1802 DDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEAFRSSSPQDAVSHMPVHQDGSCNGL 1623
+DIFDSA+RPLEG+RWWLGAEDPFQCLA CIN++EA RS SP+ A+S+MP+HQDGSCNGL
Sbjct: 650 EDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGL 709
Query: 1622 QHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLEIMRKDAEKDPVVDPNALRARLLI 1443
QHYAALGRD LGAAAVNLVAG+KPADVYSGIAARVL+IM++DA KDP DPN +RARLLI
Sbjct: 710 QHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLI 769
Query: 1442 NHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNALPDE-ELFGAACYAAKTTLTALG 1266
N VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER + D+ ELF AACYAAKTTLTALG
Sbjct: 770 NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALG 829
Query: 1265 EMFQAARSIMSWLGDCAKVIASENQPVRWTTPYGLPVVQPYRQLGRHLIKTSLQVLTLKR 1086
EMF+AARSIMSWLGDCAK+IA EN PVRWTTP GLPVVQPYR+LGRHLIKTSLQ+LTL+R
Sbjct: 830 EMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQR 889
Query: 1085 DTDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDVMNR 906
+TDK+MVKRQRTAFPPNFVHSLDGSHMMMTA+AC ++GL+FAGVHDSYWTHA DVD MN+
Sbjct: 890 ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNK 949
Query: 905 ILREKFVELYETPILENLLESFQQSFPTLTFPPFPERGDFDLKEVLESPYFFN 747
ILREKFVELY+ PILENLLESFQQSFP L FPP PERGDFDL+EVLESPYFFN
Sbjct: 950 ILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 1380 bits (3572), Expect = 0.0
Identities = 688/967 (71%), Positives = 792/967 (81%), Gaps = 5/967 (0%)
Frame = -2
Query: 3632 SQSTIFQEKTRPFELKNGV---NFRSFEMGICQNGKILFGEEDMGRPGFR-CFPNPIGFS 3465
SQ++IF +R G+ + ++ +G+ QN + D FR C G
Sbjct: 54 SQNSIFSRISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGD-----FRVCGKRGSGSL 108
Query: 3464 GFSNHPKGYSSSVAEAVPSTDTEEDVSVVDEIQVXXXXXXXXXXXXXXLNRQNQPKGVGG 3285
GF + Y S+ AEA+ ST E+ +DEIQ + QPK +GG
Sbjct: 109 GFL---RSYGSA-AEAIASTSEED----IDEIQELIEEMNKENEALKTNLQPKQPKTIGG 160
Query: 3284 MGLGKYQYQLLRRRQMKIETQSWDQAAKEYKELLADMCEQKLAPNLPYMKSLFLGWFQPL 3105
MG+GKY LLRRRQ+K+ET++W++AAKEY+ELL DMCEQKLAPNLPYMKSLFLGWF+PL
Sbjct: 161 MGVGKYN--LLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPL 218
Query: 3104 CDCIAQEQELCRQGKHRGAYAPYFDQLPADMMAVITMHKLMGLLMTGGDPGSTRVVQAAC 2925
D IA EQ+LC +GK+RGAYAP+FDQLPA+MMAVITMHKLMGLLMTGG GS RVVQAA
Sbjct: 219 RDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAAS 278
Query: 2924 HIGEAIEHEVRIHXXXXXXXXXXXXXXXXXEVEVDPVTKEQEKLRHKVTDLMKKQKLHQV 2745
HIGEAIEHE RIH + D + KE+E+LR KV LMKKQKL QV
Sbjct: 279 HIGEAIEHEARIHRFLEKTKKSNALSGDLEDTPGD-IMKERERLRKKVKILMKKQKLQQV 337
Query: 2744 RLIVRGQDDMKPWGQEAHAKVGCHLIELLMRTAYIQPPVNQLADGPPDIRPAFIHSLKMI 2565
R IV+ QDD KPWGQ+ KVGC LI++LM TAYIQPP +QL D PPDIRPAF+H+LK +
Sbjct: 338 RKIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV 397
Query: 2564 KKGAMKTGRKLGIIECDPLVRQGLEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYC 2385
+ MK R+ G+I+CDPLVR+GL+KTARHMVIPYMPMLVPP +W GYDKGAYLFLPSY
Sbjct: 398 E--TMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYI 455
Query: 2384 MRTHGARQQREAIKRAPQKQLEHVFEALNTLGNTKWRVNKRMLDVIDRIWASGGRLADLV 2205
MRTHGA+QQREA+KR P+KQLE VF+AL+TLGNTKWR+N+++L ++DRIWASGGRLADLV
Sbjct: 456 MRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLV 515
Query: 2204 DREDVPIPMEPDTEDEPELXXXXXXXXXXXKQNSERHSQRCDVELKLAVARQMKDEDGFF 2025
DREDVP+P EPD EDE ++ K+N ERHSQRCD+ELKLAVAR+MKDEDGF+
Sbjct: 516 DREDVPLPEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFY 575
Query: 2024 YPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGNSGLRWLKIHLANLYAGGVDK 1845
YPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGLRWLKIHLAN+Y GGVDK
Sbjct: 576 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDK 635
Query: 1844 LSYDGRIAFTENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEAFRSSSPQDAV 1665
LSY+GR+AF+ENH++DIFDSA+RPLEG+RWWLGAEDPFQCLA CIN++EA RS SP+ A+
Sbjct: 636 LSYEGRVAFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAI 695
Query: 1664 SHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLEIMRKDAEKD 1485
S+MP+HQDGSCNGLQHYAALGRD LGAAAVNLVAG+KPADVYSGIAARVL+IM++DA KD
Sbjct: 696 SYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKD 755
Query: 1484 PVVDPNALRARLLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNALPDE-ELFG 1308
P DPN +RARLLIN VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER + D+ ELF
Sbjct: 756 PANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFA 815
Query: 1307 AACYAAKTTLTALGEMFQAARSIMSWLGDCAKVIASENQPVRWTTPYGLPVVQPYRQLGR 1128
AACYAAKTTLTALGEMF+AARSIMSWLGDCAK+IA EN PVRWTTP GLPVVQPYR+LGR
Sbjct: 816 AACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGR 875
Query: 1127 HLIKTSLQVLTLKRDTDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHD 948
HLIKTSLQ+LTL+R+TDK+MVKRQRTAFPPNFVHSLDGSHMMMTA+AC ++GL+FAGVHD
Sbjct: 876 HLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHD 935
Query: 947 SYWTHACDVDVMNRILREKFVELYETPILENLLESFQQSFPTLTFPPFPERGDFDLKEVL 768
SYWTHA DVD MN+ILREKFVELY+ PILENLLESFQQSFP L FPP PERGDFDL+EVL
Sbjct: 936 SYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVL 995
Query: 767 ESPYFFN 747
ESPYFFN
Sbjct: 996 ESPYFFN 1002
>ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|590698457|ref|XP_007045722.1| DNA-directed RNA
polymerase isoform 1 [Theobroma cacao]
gi|508709656|gb|EOY01553.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1|
DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
Length = 996
Score = 1379 bits (3570), Expect = 0.0
Identities = 708/1006 (70%), Positives = 800/1006 (79%), Gaps = 26/1006 (2%)
Frame = -2
Query: 3686 MWRRVVKQIA----------------SSRKLMRFSQSTIFQEKTRPFELKNGVNFRSFEM 3555
MWR +VKQ A SS FSQ ++F K R E + +
Sbjct: 1 MWRSLVKQAAYREKFKFVAEPYTCSLSSCSATGFSQDSVFANKVRASEARANGFYGCLFP 60
Query: 3554 GICQNGKILFGEEDMGRPGFRCFPNPIGFSGFSNHPKGYSSSVAEAVPSTDTEEDVSVVD 3375
G Q G ++D+G+ +P+ FSG + KGY+S+ AEAV ST EED+S +
Sbjct: 61 GFRQIGVFSSQKDDLGKFSLNQPGDPLRFSGKFWNLKGYASA-AEAVIST--EEDMSGSE 117
Query: 3374 EIQVXXXXXXXXXXXXXXLNRQNQPKGVG-GMGLGKYQYQLLRRRQMKIETQSWDQAAKE 3198
EI L QPK V GMG+ KY L++RQ+KIET++W++AAKE
Sbjct: 118 EIHELMEAMAREEKKMSFLV---QPKKVAEGMGVAKYN--TLKKRQIKIETEAWEEAAKE 172
Query: 3197 YKELLADMCEQKLAPNLPYMKSLFLGWFQPLCDCIAQEQELCRQGKHRGAYAPYFDQLPA 3018
Y+ELL DMCE KLAPNLPY+KSLFLGWF+PL D I EQELC++ R ++A YF++L A
Sbjct: 173 YQELLMDMCEHKLAPNLPYIKSLFLGWFEPLRDSIVGEQELCKENC-RISHAAYFNELSA 231
Query: 3017 DMMAVITMHKLMGLLMTG-GDPGSTRVVQAACHIGEAIEHEVRIHXXXXXXXXXXXXXXX 2841
DMMAV+TMHKLMGLLMT G RVVQAAC IGEAIEHE +I
Sbjct: 232 DMMAVVTMHKLMGLLMTNTAGTGGIRVVQAACQIGEAIEHEAKIQSFLGKTKKKKTTDKK 291
Query: 2840 XXEVEVDPVT-------KEQEKLRHKVTDLMKKQKLHQVRLIVRGQDDMKPWGQEAHAKV 2682
E +PVT K+QEKLR KVT L+KKQK+HQVR IV+G D K WGQEAH KV
Sbjct: 292 PDG-ESEPVTNKQEKLVKDQEKLRKKVTQLLKKQKVHQVRKIVKGHDTSKSWGQEAHVKV 350
Query: 2681 GCHLIELLMRTAYIQPPVNQLADGPPDIRPAFIHSLKMIKKGAMKTGRKLGIIECDPLVR 2502
GC LI+LL+ AYIQPPV+QL D PPDIRPAF+HSLK I K K R+ G+IECD LVR
Sbjct: 351 GCRLIQLLIENAYIQPPVDQLGDCPPDIRPAFVHSLKTITKDGNKGSRRYGVIECDLLVR 410
Query: 2501 QGLEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYCMRTHGARQQREAIKRAPQKQL 2322
+GLEKTARHMVIPYMPMLVPP NWTGYD+GAYLFLPSY MRTHGA+QQRE +KR P+KQL
Sbjct: 411 KGLEKTARHMVIPYMPMLVPPQNWTGYDRGAYLFLPSYVMRTHGAKQQRETVKRTPRKQL 470
Query: 2321 EHVFEALNTLGNTKWRVNKRMLDVIDRIWASGGRLADLVDREDVPIPMEPDTEDEPELXX 2142
E +FEAL+TLGNTKWR+NKR+L V+DR+WA+GGR+A LVDREDVP+P +PDTEDE E+
Sbjct: 471 EPIFEALDTLGNTKWRINKRVLGVVDRLWANGGRVASLVDREDVPLPEKPDTEDEAEIQK 530
Query: 2141 XXXXXXXXXKQNSERHSQRCDVELKLAVARQMKDEDGFFYPHNVDFRGRAYPMHPYLNHL 1962
KQN+ERHS RCDVELKLAVAR+M+DEDGF+YPHN+DFRGRAYPMHPYLNHL
Sbjct: 531 WKWKVKAANKQNNERHSLRCDVELKLAVARKMRDEDGFYYPHNLDFRGRAYPMHPYLNHL 590
Query: 1961 GSDLCRGILEFAEGRPLGNSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLDDIFDSA 1782
GSDLCRG+LEFAEGRPLG SGLRWLKIHLANLYAGGVDKLSY+GRIAFTENHLDDIFDSA
Sbjct: 591 GSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSA 650
Query: 1781 DRPLEGRRWWLGAEDPFQCLAVCINLSEAFRSSSPQDAVSHMPVHQDGSCNGLQHYAALG 1602
DRPLEGRRWWL AEDPFQCLA CINLSEA RSSSP+ +SHMPVHQDGSCNGLQHYAALG
Sbjct: 651 DRPLEGRRWWLSAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALG 710
Query: 1601 RDKLGAAAVNLVAGEKPADVYSGIAARVLEIMRKDAEKDPVVDPNALRARLLINHVDRKL 1422
RDKLGAA+VNLVAGEKPADVYSGIAARV++IMR+DAEKDP ++P+AL ARLLIN VDRKL
Sbjct: 711 RDKLGAASVNLVAGEKPADVYSGIAARVVDIMRRDAEKDPAINPHALHARLLINQVDRKL 770
Query: 1421 VKQTVMTSVYGVTYIGARDQIKRRLKERNALPDE-ELFGAACYAAKTTLTALGEMFQAAR 1245
VKQTVMTSVYGVTYIGARDQIKRRLKER A+ D+ E+F A+CYAA+TTLTALGEMFQAAR
Sbjct: 771 VKQTVMTSVYGVTYIGARDQIKRRLKERCAIADDTEMFVASCYAARTTLTALGEMFQAAR 830
Query: 1244 SIMSWLGDCAKVIASENQPVRWTTPYGLPVVQPYRQLGRHLIKTSLQVLTLKRDTDKIMV 1065
SIM+WLG+CAKVI+SENQPVRW TP GLPVVQPYRQLGRHLIKTSLQVLTL+R+TDK+M
Sbjct: 831 SIMNWLGECAKVISSENQPVRWVTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMA 890
Query: 1064 KRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDVMNRILREKFV 885
KRQRTAFPPNFVHSLDGSHMMMTAVAC KAGLNFAGVHDSYWTHACDVD MNRILREKFV
Sbjct: 891 KRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFV 950
Query: 884 ELYETPILENLLESFQQSFPTLTFPPFPERGDFDLKEVLESPYFFN 747
ELYE PILENLLESFQ+SFP+L FPP PERGDFDL+EVLESPYFFN
Sbjct: 951 ELYEAPILENLLESFQKSFPSLNFPPLPERGDFDLREVLESPYFFN 996
>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 1373 bits (3555), Expect = 0.0
Identities = 697/1013 (68%), Positives = 801/1013 (79%), Gaps = 33/1013 (3%)
Frame = -2
Query: 3686 MWRRVVKQIASSRK--------LMRFSQSTIFQEKTRPFELKNGVNFRSFEMGICQNG-- 3537
MWR + KQ A SRK L+ FSQ + KTRP + + + +G+ QN
Sbjct: 1 MWRYISKQ-AYSRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTNPNLGLSQNSIF 59
Query: 3536 -------KILFG--EEDMGRPGFRCFPNPIGFS-------------GFSNHPKGYSSSVA 3423
+ L G EE P N + S G + Y S+ A
Sbjct: 60 SRISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRSYGSA-A 118
Query: 3422 EAVPSTDTEEDVSVVDEIQVXXXXXXXXXXXXXXLNRQNQPKGVGGMGLGKYQYQLLRRR 3243
EA+ ST E+ DEIQ + QPK +GGMG+GKY LLRRR
Sbjct: 119 EAIASTSEED----TDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYN--LLRRR 172
Query: 3242 QMKIETQSWDQAAKEYKELLADMCEQKLAPNLPYMKSLFLGWFQPLCDCIAQEQELCRQG 3063
Q+K+ET++W++AAKEY+ELL DMCEQKLAPNLPYMKSLFLGWF+PL D IA EQ+LC +G
Sbjct: 173 QIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEG 232
Query: 3062 KHRGAYAPYFDQLPADMMAVITMHKLMGLLMTGGDPGSTRVVQAACHIGEAIEHEVRIHX 2883
K+RGA AP+FDQLPA+MMAVITMHKLMG LMTGG GS RVVQAA HIGEAIEHE RIH
Sbjct: 233 KNRGACAPFFDQLPAEMMAVITMHKLMGWLMTGGGTGSARVVQAASHIGEAIEHEARIHR 292
Query: 2882 XXXXXXXXXXXXXXXXEVEVDPVTKEQEKLRHKVTDLMKKQKLHQVRLIVRGQDDMKPWG 2703
+ D + KE+E++R KV LMKKQKL QVR IV+ QDD KPWG
Sbjct: 293 FLEKTKKSNALSGDLEDTPGD-IMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWG 351
Query: 2702 QEAHAKVGCHLIELLMRTAYIQPPVNQLADGPPDIRPAFIHSLKMIKKGAMKTGRKLGII 2523
Q+ KVGC LI++LM TAYIQPP +QL D PPDIRPAF+H+LK ++ MK R+ G+I
Sbjct: 352 QDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTVE--TMKGSRRYGVI 409
Query: 2522 ECDPLVRQGLEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYCMRTHGARQQREAIK 2343
+CDPLVR+GL+KTARHMVIPYMPMLVPP +W GYDKGAYLFLPSY MRTHGA+QQREA+K
Sbjct: 410 QCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVK 469
Query: 2342 RAPQKQLEHVFEALNTLGNTKWRVNKRMLDVIDRIWASGGRLADLVDREDVPIPMEPDTE 2163
R P+KQLE VF+AL+TLGNTKWR+N+++L ++DRIWASGGRLADLVDREDVP+P EPD E
Sbjct: 470 RVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAE 529
Query: 2162 DEPELXXXXXXXXXXXKQNSERHSQRCDVELKLAVARQMKDEDGFFYPHNVDFRGRAYPM 1983
DE ++ K+N ERHSQRCD+ELKLAVAR+MKDEDGF+YPHN+DFRGRAYPM
Sbjct: 530 DEAQIRKWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPM 589
Query: 1982 HPYLNHLGSDLCRGILEFAEGRPLGNSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHL 1803
HPYLNHLGSDLCRGILEFAEGRPLG SGLRWLKIHLAN+Y GGVDKLSY+GR+AF+ENH+
Sbjct: 590 HPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHV 649
Query: 1802 DDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEAFRSSSPQDAVSHMPVHQDGSCNGL 1623
+DIFDSA+RPLEG+RWWLGAEDPFQCLA CIN++EA RS SP+ A+S+MP+HQDGSCNGL
Sbjct: 650 EDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGL 709
Query: 1622 QHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLEIMRKDAEKDPVVDPNALRARLLI 1443
QHYAALGRD LGAAAVNLVAG+KPADVYSGIAARVL+IM++DA KDP DPN +RARLLI
Sbjct: 710 QHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLI 769
Query: 1442 NHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNALPDE-ELFGAACYAAKTTLTALG 1266
N VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER + D+ ELF AACYAAKTTLTALG
Sbjct: 770 NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALG 829
Query: 1265 EMFQAARSIMSWLGDCAKVIASENQPVRWTTPYGLPVVQPYRQLGRHLIKTSLQVLTLKR 1086
EMF+AARSIMSWLGDCAK+IA EN PVRWTTP GLPVVQPYR+LGRHLIKTSLQ+LTL+R
Sbjct: 830 EMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQR 889
Query: 1085 DTDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDVMNR 906
+TDK+MVKRQRTAFPPNFVHSLDGSHMMMTA+AC ++GL+FAGVHDSYWTHA DVD MN+
Sbjct: 890 ETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNK 949
Query: 905 ILREKFVELYETPILENLLESFQQSFPTLTFPPFPERGDFDLKEVLESPYFFN 747
ILREKFVELY+ PILENLLESFQQSFP L FPP PERGDFDL+EVLESPYFFN
Sbjct: 950 ILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
DNA-directed RNA polymerase 2, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
Length = 997
Score = 1371 bits (3548), Expect = 0.0
Identities = 687/1004 (68%), Positives = 791/1004 (78%), Gaps = 24/1004 (2%)
Frame = -2
Query: 3686 MWRRVVKQIASSRKLMRFSQSTIFQEKTRPFELKNGVNFRSFEMGICQNGKILFGEEDMG 3507
MWR ++ + S K + FS + + ++ V + +C L G
Sbjct: 1 MWRNFARRTSLSSKKLNFSSDCT--QLNQDLDILQKVRHPEAQTLLCSPYSFLGSRRISG 58
Query: 3506 ---------RPGFRCFPNPIGFSGFSNHPKGYSSSVAEAVPSTDTEEDVSVVDEIQVXXX 3354
+P F NP GFS F KGY+++ A+ + STD E D S DE+Q
Sbjct: 59 LSSQNHEFIKPSFTNLTNPFGFSHFLF--KGYATAAAQVIASTD-ESDFSGCDELQEQIE 115
Query: 3353 XXXXXXXXXXXLNRQNQP-----KGVGGMGLGKYQYQLLRRRQMKIETQSWDQAAKEYKE 3189
RQ Q K + GMG+GKY +L++RQ+K+ET++W++AA+EY+E
Sbjct: 116 EINKHHKKMDAHFRQQQQQQQRKKTIAGMGIGKYT--ILKKRQIKMETEAWEEAAREYQE 173
Query: 3188 LLADMCEQKLAPNLPYMKSLFLGWFQPLCDCIAQEQELCRQGKHRGAYAPYFDQLPADMM 3009
LL DMCEQKLAPNLPY+KSLFLGWF+PL D IA+EQEL R+ ++ ++ PYFD LPADMM
Sbjct: 174 LLTDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAKEQELSREKNNKLSHGPYFDALPADMM 233
Query: 3008 AVITMHKLMGLLMT-GGDPGSTRVVQAACHIGEAIEHEVRIHXXXXXXXXXXXXXXXXXE 2832
AVITMHKLMGLLMT G GS RVVQAAC +GEAIEHE RIH
Sbjct: 234 AVITMHKLMGLLMTTNGGNGSVRVVQAACAVGEAIEHEARIHRFLEKTKKKKKSTKNEEP 293
Query: 2831 V-EVDPVT-------KEQEKLRHKVTDLMKKQKLHQVRLIVRGQDDMKPWGQEAHAKVGC 2676
+++PVT KEQEKLR KVT+LMKKQK+ QVR + +G DD PWGQEA KVGC
Sbjct: 294 EGKLEPVTSDAEKLAKEQEKLRKKVTELMKKQKVQQVRGLTKGHDDSMPWGQEAQVKVGC 353
Query: 2675 HLIELLMRTAYIQPPVNQLADGPPDIRPAFIHSLKMIKKGAMKTGRKLGIIECDPLVRQG 2496
LI+LL+ TAYIQPPVNQL DG PDIRPAF+H+LK + K KT R+ G+IECDP+VR G
Sbjct: 354 RLIQLLIETAYIQPPVNQLGDGLPDIRPAFMHTLKNVMKDTQKTSRRYGVIECDPIVRNG 413
Query: 2495 LEKTARHMVIPYMPMLVPPINWTGYDKGAYLFLPSYCMRTHGARQQREAIKRAPQKQLEH 2316
LEK+ARHMVIPYMPMLVPP+NW GYD+GAYLFLPSY MRTHGA+QQR A+KR P KQLE
Sbjct: 414 LEKSARHMVIPYMPMLVPPLNWEGYDQGAYLFLPSYVMRTHGAKQQRNAVKRTPWKQLEP 473
Query: 2315 VFEALNTLGNTKWRVNKRMLDVIDRIWASGGRLADLVDREDVPIPMEPDTEDEPELXXXX 2136
V+EALNTLGNTKWR+NK++L V+DRIWA+GGRLA L+DRED P+P E +TEDE E+
Sbjct: 474 VYEALNTLGNTKWRINKKILTVVDRIWANGGRLAGLIDREDEPLPEELETEDENEIKKWK 533
Query: 2135 XXXXXXXKQNSERHSQRCDVELKLAVARQMKDEDGFFYPHNVDFRGRAYPMHPYLNHLGS 1956
K+NSERHSQRCD+ELKLAVAR+MKDEDGF+YPHN+DFRGRAYPMHP+LNHLGS
Sbjct: 534 WKVKNVKKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGS 593
Query: 1955 DLCRGILEFAEGRPLGNSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLDDIFDSADR 1776
D+CRGILEFAEGRPLG SG RWLKIHLAN+YAGGVDKLSY+GR+AFTENHLD IFDSADR
Sbjct: 594 DMCRGILEFAEGRPLGKSGFRWLKIHLANVYAGGVDKLSYEGRVAFTENHLDYIFDSADR 653
Query: 1775 PLEGRRWWLGAEDPFQCLAVCINLSEAFRSSSPQDAVSHMPVHQDGSCNGLQHYAALGRD 1596
PLEGRRWWLGAEDPFQCLA C NL+EAFRSSSP+ +SHMP+HQDGSCNGLQHYAALGRD
Sbjct: 654 PLEGRRWWLGAEDPFQCLATCFNLAEAFRSSSPETTISHMPIHQDGSCNGLQHYAALGRD 713
Query: 1595 KLGAAAVNLVAGEKPADVYSGIAARVLEIMRKDAEKDPVVDPNALRARLLINHVDRKLVK 1416
KLGAAAVNLV+GEKPADVYSGIAARVL+IMR DAEKDP +PNAL A+LLIN VDRKLVK
Sbjct: 714 KLGAAAVNLVSGEKPADVYSGIAARVLDIMRTDAEKDPGTNPNALHAKLLINEVDRKLVK 773
Query: 1415 QTVMTSVYGVTYIGARDQIKRRLKERNALPDE-ELFGAACYAAKTTLTALGEMFQAARSI 1239
QTVMTSVYGVTYIGARDQIKRRLKER+A+ D+ L+ A+CYAAKTTL AL EMF+ ARSI
Sbjct: 774 QTVMTSVYGVTYIGARDQIKRRLKERDAVADDPSLYAASCYAAKTTLMALEEMFEGARSI 833
Query: 1238 MSWLGDCAKVIASENQPVRWTTPYGLPVVQPYRQLGRHLIKTSLQVLTLKRDTDKIMVKR 1059
M+WLG+CAKVIASENQPV+WTTP GLPVVQPYRQLGRHLIKTSLQ+L L+++TDKIMVKR
Sbjct: 834 MAWLGECAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQMLALQKETDKIMVKR 893
Query: 1058 QRTAFPPNFVHSLDGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDVMNRILREKFVEL 879
QRTAFPPNFVHSLDGSHMMMTAVAC AGLNFAGVHDSYWTHACDVD MNRILRE FVEL
Sbjct: 894 QRTAFPPNFVHSLDGSHMMMTAVACKHAGLNFAGVHDSYWTHACDVDEMNRILRENFVEL 953
Query: 878 YETPILENLLESFQQSFPTLTFPPFPERGDFDLKEVLESPYFFN 747
YE PILENLLE FQ+SFP L FPP P+RGDFDL++VLESPYFFN
Sbjct: 954 YEAPILENLLEGFQKSFPKLKFPPLPDRGDFDLRDVLESPYFFN 997
>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
Length = 810
Score = 1362 bits (3525), Expect = 0.0
Identities = 667/811 (82%), Positives = 718/811 (88%), Gaps = 1/811 (0%)
Frame = -2
Query: 3176 MCEQKLAPNLPYMKSLFLGWFQPLCDCIAQEQELCRQGKHRGAYAPYFDQLPADMMAVIT 2997
MCEQKLAPNLPY+KSLFLGWF+PL D IA EQ+LC+QGK+R AYAPYFD LPADMMAVIT
Sbjct: 1 MCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVIT 60
Query: 2996 MHKLMGLLMTGGDPGSTRVVQAACHIGEAIEHEVRIHXXXXXXXXXXXXXXXXXEVEVDP 2817
MHKLMGLLMTG GS RVVQAACHIGEAIEHEVRI +P
Sbjct: 61 MHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGS-NP 119
Query: 2816 VTKEQEKLRHKVTDLMKKQKLHQVRLIVRGQDDMKPWGQEAHAKVGCHLIELLMRTAYIQ 2637
VTKEQEKLR KV+ LMKKQKL QVR IV+ QDD KPWGQ+A+ KVG LIELL+ TAYIQ
Sbjct: 120 VTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQ 179
Query: 2636 PPVNQLADGPPDIRPAFIHSLKMIKKGAMKTGRKLGIIECDPLVRQGLEKTARHMVIPYM 2457
PP +QL DGPPDIRPAF+H+LK + K K R+ G+IECDPLVR+GLEKTARHMVIPYM
Sbjct: 180 PPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYM 239
Query: 2456 PMLVPPINWTGYDKGAYLFLPSYCMRTHGARQQREAIKRAPQKQLEHVFEALNTLGNTKW 2277
PMLVPP+NWTGYDKGAYLFLPSY MR HGARQQREAIKRAP+K LE FEALNTLGNTKW
Sbjct: 240 PMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKW 299
Query: 2276 RVNKRMLDVIDRIWASGGRLADLVDREDVPIPMEPDTEDEPELXXXXXXXXXXXKQNSER 2097
R+NKR+L VIDRIWASGGRLADLVDREDVP+P EPDTEDE E+ K+NSER
Sbjct: 300 RINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSER 359
Query: 2096 HSQRCDVELKLAVARQMKDEDGFFYPHNVDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR 1917
HSQRCD+ELKLAVAR+MKDEDGFFYPHN+DFRGRAYPMHPYLNHLGSDLCRGILEFAEGR
Sbjct: 360 HSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGR 419
Query: 1916 PLGNSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEGRRWWLGAED 1737
PLG SGLRWLKIHLAN+YAGGVDKLSY+GR+AFTENHL+DIFDSADRPLEGRRWWL AED
Sbjct: 420 PLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAED 479
Query: 1736 PFQCLAVCINLSEAFRSSSPQDAVSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGE 1557
PFQCLA CINLSEA RSSSP+ +SHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGE
Sbjct: 480 PFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGE 539
Query: 1556 KPADVYSGIAARVLEIMRKDAEKDPVVDPNALRARLLINHVDRKLVKQTVMTSVYGVTYI 1377
KPADVYSGIAARVL+IM++DA+KDP +PNALRARLLI+ VDRKLVKQTVMTSVYGVTYI
Sbjct: 540 KPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYI 599
Query: 1376 GARDQIKRRLKERNALPDE-ELFGAACYAAKTTLTALGEMFQAARSIMSWLGDCAKVIAS 1200
GARDQIKRRLKER A+ DE E+F A+CYAAKTTLTALGEMF+AARSIMSWLGDCAKVIAS
Sbjct: 600 GARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIAS 659
Query: 1199 ENQPVRWTTPYGLPVVQPYRQLGRHLIKTSLQVLTLKRDTDKIMVKRQRTAFPPNFVHSL 1020
EN PVRW TP GLPVVQPYR+LGRHLIKTSLQVL+L+R+TDK+MVKRQRTAFPPNFVHSL
Sbjct: 660 ENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSL 719
Query: 1019 DGSHMMMTAVACNKAGLNFAGVHDSYWTHACDVDVMNRILREKFVELYETPILENLLESF 840
DGSHMMMTAVAC KAGLNFAGVHDSYWTHACDVD MNRILREKFVELY PILENLLE F
Sbjct: 720 DGSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGF 779
Query: 839 QQSFPTLTFPPFPERGDFDLKEVLESPYFFN 747
Q+SFPTL FPP PERGDFDL+EVLESPYFFN
Sbjct: 780 QKSFPTLNFPPLPERGDFDLREVLESPYFFN 810