BLASTX nr result
ID: Akebia25_contig00008416
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00008416
(1145 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001780033.1| predicted protein [Physcomitrella patens] gi... 64 2e-07
ref|XP_001765745.1| predicted protein [Physcomitrella patens] gi... 62 3e-07
ref|XP_002305148.2| hypothetical protein POPTR_0004s04100g [Popu... 62 6e-07
ref|XP_006827799.1| hypothetical protein AMTR_s00009p00267190 [A... 62 6e-07
ref|XP_003635431.1| PREDICTED: splicing factor U2af large subuni... 62 6e-07
ref|XP_002267854.2| PREDICTED: splicing factor U2af large subuni... 62 6e-07
ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Sela... 62 6e-07
ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Sela... 62 6e-07
emb|CBI35712.3| unnamed protein product [Vitis vinifera] 62 6e-07
emb|CBI25913.3| unnamed protein product [Vitis vinifera] 62 6e-07
ref|XP_001763056.1| predicted protein [Physcomitrella patens] gi... 62 6e-07
ref|XP_001766902.1| predicted protein [Physcomitrella patens] gi... 62 6e-07
ref|XP_004293510.1| PREDICTED: splicing factor U2af large subuni... 61 1e-06
ref|XP_007213839.1| hypothetical protein PRUPE_ppa006486mg [Prun... 61 1e-06
gb|EXB82788.1| Splicing factor U2af large subunit B [Morus notab... 60 1e-06
gb|EYU43415.1| hypothetical protein MIMGU_mgv1a022682mg, partial... 60 2e-06
sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large... 59 3e-06
gb|EPS64699.1| hypothetical protein M569_10077, partial [Genlise... 59 4e-06
ref|XP_002979723.1| hypothetical protein SELMODRAFT_13030 [Selag... 59 5e-06
ref|XP_002988368.1| hypothetical protein SELMODRAFT_235524 [Sela... 59 5e-06
>ref|XP_001780033.1| predicted protein [Physcomitrella patens]
gi|162668531|gb|EDQ55136.1| predicted protein
[Physcomitrella patens]
Length = 536
Score = 63.5 bits (153), Expect = 2e-07
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 2/47 (4%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQE--VGSPMKIAKIFRLEVG 36
SFGPLRGFDLV DRDTGNS+GYGFCVYQ+ V + + IA + L++G
Sbjct: 339 SFGPLRGFDLVKDRDTGNSKGYGFCVYQDPSVTTDVAIAALNGLKMG 385
>ref|XP_001765745.1| predicted protein [Physcomitrella patens]
gi|162682922|gb|EDQ69336.1| predicted protein
[Physcomitrella patens]
Length = 491
Score = 62.4 bits (150), Expect = 3e-07
Identities = 30/46 (65%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQEVG-SPMKIAKIFRLEVG 36
SFGPLRGFDLV DRDTGNS+GYGFCVYQ+ + + IA + L++G
Sbjct: 301 SFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDVAIAALNGLKMG 346
>ref|XP_002305148.2| hypothetical protein POPTR_0004s04100g [Populus trichocarpa]
gi|550340286|gb|EEE85659.2| hypothetical protein
POPTR_0004s04100g [Populus trichocarpa]
Length = 545
Score = 61.6 bits (148), Expect = 6e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQE 84
SFGPLRGFDLV DRDTGNS+GYGFCVYQ+
Sbjct: 338 SFGPLRGFDLVKDRDTGNSKGYGFCVYQD 366
>ref|XP_006827799.1| hypothetical protein AMTR_s00009p00267190 [Amborella trichopoda]
gi|548832419|gb|ERM95215.1| hypothetical protein
AMTR_s00009p00267190 [Amborella trichopoda]
Length = 491
Score = 61.6 bits (148), Expect = 6e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQE 84
SFGPLRGFDLV DRDTGNS+GYGFCVYQ+
Sbjct: 285 SFGPLRGFDLVKDRDTGNSKGYGFCVYQD 313
>ref|XP_003635431.1| PREDICTED: splicing factor U2af large subunit B-like, partial
[Vitis vinifera]
Length = 238
Score = 61.6 bits (148), Expect = 6e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQE 84
SFGPLRGFDLV DRDTGNS+GYGFCVYQ+
Sbjct: 31 SFGPLRGFDLVKDRDTGNSKGYGFCVYQD 59
>ref|XP_002267854.2| PREDICTED: splicing factor U2af large subunit B-like, partial
[Vitis vinifera]
Length = 410
Score = 61.6 bits (148), Expect = 6e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQE 84
SFGPLRGFDLV DRDTGNS+GYGFCVYQ+
Sbjct: 249 SFGPLRGFDLVKDRDTGNSKGYGFCVYQD 277
>ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
gi|300142484|gb|EFJ09184.1| hypothetical protein
SELMODRAFT_160385 [Selaginella moellendorffii]
Length = 421
Score = 61.6 bits (148), Expect = 6e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQE 84
SFGPLRGFDLV DRDTGNS+GYGFCVYQ+
Sbjct: 205 SFGPLRGFDLVKDRDTGNSKGYGFCVYQD 233
>ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
gi|300140455|gb|EFJ07178.1| hypothetical protein
SELMODRAFT_161898 [Selaginella moellendorffii]
Length = 420
Score = 61.6 bits (148), Expect = 6e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQE 84
SFGPLRGFDLV DRDTGNS+GYGFCVYQ+
Sbjct: 205 SFGPLRGFDLVKDRDTGNSKGYGFCVYQD 233
>emb|CBI35712.3| unnamed protein product [Vitis vinifera]
Length = 412
Score = 61.6 bits (148), Expect = 6e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQE 84
SFGPLRGFDLV DRDTGNS+GYGFCVYQ+
Sbjct: 292 SFGPLRGFDLVKDRDTGNSKGYGFCVYQD 320
>emb|CBI25913.3| unnamed protein product [Vitis vinifera]
Length = 6467
Score = 61.6 bits (148), Expect = 6e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQE 84
SFGPLRGFDLV DRDTGNS+GYGFCVYQ+
Sbjct: 6260 SFGPLRGFDLVKDRDTGNSKGYGFCVYQD 6288
>ref|XP_001763056.1| predicted protein [Physcomitrella patens]
gi|162685868|gb|EDQ72261.1| predicted protein
[Physcomitrella patens]
Length = 503
Score = 61.6 bits (148), Expect = 6e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQE 84
SFGPLRGFDLV DRDTGNS+GYGFCVYQ+
Sbjct: 309 SFGPLRGFDLVKDRDTGNSKGYGFCVYQD 337
>ref|XP_001766902.1| predicted protein [Physcomitrella patens]
gi|162681881|gb|EDQ68304.1| predicted protein
[Physcomitrella patens]
Length = 486
Score = 61.6 bits (148), Expect = 6e-07
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQE 84
SFGPLRGFDLV DRDTGNS+GYGFCVYQ+
Sbjct: 299 SFGPLRGFDLVKDRDTGNSKGYGFCVYQD 327
>ref|XP_004293510.1| PREDICTED: splicing factor U2af large subunit B-like [Fragaria
vesca subsp. vesca]
Length = 523
Score = 60.8 bits (146), Expect = 1e-06
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -1
Query: 173 RSFGPLRGFDLVTDRDTGNSEGYGFCVYQE 84
+SFGPLRGFDLV D+DTGNS+GYGFCVYQ+
Sbjct: 316 QSFGPLRGFDLVKDKDTGNSKGYGFCVYQD 345
>ref|XP_007213839.1| hypothetical protein PRUPE_ppa006486mg [Prunus persica]
gi|462409704|gb|EMJ15038.1| hypothetical protein
PRUPE_ppa006486mg [Prunus persica]
Length = 409
Score = 60.8 bits (146), Expect = 1e-06
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -1
Query: 173 RSFGPLRGFDLVTDRDTGNSEGYGFCVYQE 84
+SFGPLRGFDLV D+DTGNS+GYGFCVYQ+
Sbjct: 201 QSFGPLRGFDLVKDKDTGNSKGYGFCVYQD 230
>gb|EXB82788.1| Splicing factor U2af large subunit B [Morus notabilis]
Length = 530
Score = 60.5 bits (145), Expect = 1e-06
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQE 84
SFGPLRGFDLV D+DTGNS+GYGFCVYQ+
Sbjct: 323 SFGPLRGFDLVKDKDTGNSKGYGFCVYQD 351
>gb|EYU43415.1| hypothetical protein MIMGU_mgv1a022682mg, partial [Mimulus
guttatus]
Length = 365
Score = 60.1 bits (144), Expect = 2e-06
Identities = 28/46 (60%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQEVG-SPMKIAKIFRLEVG 36
SFGPLRGFDLV DRDTGNS+GYGFC+Y++ + + A + L+VG
Sbjct: 148 SFGPLRGFDLVKDRDTGNSKGYGFCIYKDPSVTDIACASLNGLKVG 193
>sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
subunit B; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit B;
Short=U2 snRNP auxiliary factor large subunit B
gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor,
large subunit [Nicotiana plumbaginifolia]
Length = 573
Score = 59.3 bits (142), Expect = 3e-06
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQEV 81
SFGPLRGFDLV DR+TGNS+GY FCVYQ+V
Sbjct: 381 SFGPLRGFDLVKDRETGNSKGYAFCVYQDV 410
>gb|EPS64699.1| hypothetical protein M569_10077, partial [Genlisea aurea]
Length = 529
Score = 58.9 bits (141), Expect = 4e-06
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQEV 81
SFGPLRGFDLV DR+TGNS+GY FCVYQ++
Sbjct: 339 SFGPLRGFDLVKDRETGNSKGYAFCVYQDI 368
>ref|XP_002979723.1| hypothetical protein SELMODRAFT_13030 [Selaginella moellendorffii]
gi|300152483|gb|EFJ19125.1| hypothetical protein
SELMODRAFT_13030 [Selaginella moellendorffii]
Length = 360
Score = 58.5 bits (140), Expect = 5e-06
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQE 84
SFGPLRGFDLV DR++GNS+GYGFCVYQ+
Sbjct: 172 SFGPLRGFDLVKDRESGNSKGYGFCVYQD 200
>ref|XP_002988368.1| hypothetical protein SELMODRAFT_235524 [Selaginella moellendorffii]
gi|300143770|gb|EFJ10458.1| hypothetical protein
SELMODRAFT_235524 [Selaginella moellendorffii]
Length = 353
Score = 58.5 bits (140), Expect = 5e-06
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = -1
Query: 170 SFGPLRGFDLVTDRDTGNSEGYGFCVYQE 84
SFGPLRGFDLV DR++GNS+GYGFCVYQ+
Sbjct: 165 SFGPLRGFDLVKDRESGNSKGYGFCVYQD 193