BLASTX nr result
ID: Akebia25_contig00008278
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00008278
(282 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006648728.1| PREDICTED: putative pentatricopeptide repeat... 63 5e-08
ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group] g... 62 8e-08
gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indi... 62 8e-08
ref|XP_002324235.2| pentatricopeptide repeat-containing family p... 59 5e-07
gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays] 59 5e-07
ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis tha... 59 7e-07
gb|AEP33765.1| organelle transcript processing 82, partial [Lepi... 59 7e-07
ref|XP_002892433.1| pentatricopeptide repeat-containing protein ... 59 7e-07
ref|XP_007020019.1| Pentatricopeptide repeat (PPR) superfamily p... 59 9e-07
ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Caps... 59 9e-07
gb|AEP33760.1| organelle transcript processing 82, partial [Caps... 59 9e-07
ref|XP_003525660.2| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
gb|AEP33773.1| organelle transcript processing 82, partial [Lobu... 58 1e-06
gb|AEP33769.1| organelle transcript processing 82, partial [Olim... 58 1e-06
gb|AEP33768.1| organelle transcript processing 82, partial [Nast... 58 1e-06
gb|AEP33764.1| organelle transcript processing 82, partial [Iber... 58 1e-06
gb|AEP33761.1| organelle transcript processing 82, partial [Cruc... 58 1e-06
gb|AEP33758.1| organelle transcript processing 82, partial [Barb... 58 1e-06
ref|XP_002309169.1| pentatricopeptide repeat-containing family p... 58 1e-06
ref|XP_006364895.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
>ref|XP_006648728.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like, partial [Oryza brachyantha]
Length = 549
Score = 62.8 bits (151), Expect = 5e-08
Identities = 26/56 (46%), Positives = 43/56 (76%)
Frame = -1
Query: 282 AKKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV 115
AKK+TG SFIE++G+ HEF+ G+ HP++ +IY +L ++ER L+ +G +DTS ++
Sbjct: 410 AKKETGLSFIEWNGLVHEFMSGDTRHPQTRKIYALLEDIERRLQLIGYVKDTSQVI 465
>ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide
(PPR) repeat-containing protein [Oryza sativa Japonica
Group] gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza
sativa Japonica Group] gi|125582482|gb|EAZ23413.1|
hypothetical protein OsJ_07107 [Oryza sativa Japonica
Group] gi|215712305|dbj|BAG94432.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 586
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = -1
Query: 282 AKKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV 115
AKK+TG SFIE +G+ HEF+ G+ HP + +IY +L ++ER L+ +G +DTS ++
Sbjct: 447 AKKETGLSFIELNGLVHEFISGDTRHPLTRKIYALLEDIERRLQLIGYVKDTSQVI 502
>gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
Length = 629
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = -1
Query: 282 AKKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV 115
AKK+TG SFIE +G+ HEF+ G+ HP + +IY +L ++ER L+ +G +DTS ++
Sbjct: 447 AKKETGLSFIELNGLVHEFISGDTRHPLTRKIYALLEDIERRLQLIGYVKDTSQVI 502
>ref|XP_002324235.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550317719|gb|EEF02800.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 736
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = -1
Query: 279 KKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV 115
KK GCS IE D + HEF+VG+ HP+S EIY ML E++ L++ G DTS ++
Sbjct: 599 KKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVL 653
>gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
Length = 625
Score = 59.3 bits (142), Expect = 5e-07
Identities = 25/56 (44%), Positives = 42/56 (75%)
Frame = -1
Query: 282 AKKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV 115
AKK+TG SFIE++G+ HEF G+ HP++ +IY +L ++E+ L+ +G +DTS ++
Sbjct: 486 AKKETGLSFIEWNGLVHEFRSGDTRHPQTRQIYALLEDMEQRLQLIGYVKDTSQVL 541
>ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g08070 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15
[Arabidopsis thaliana] gi|332190118|gb|AEE28239.1|
chloroplast RNA editing factor [Arabidopsis thaliana]
Length = 741
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = -1
Query: 279 KKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV 115
KK GCS IE D + HEF++G+ HPR+ EIY ML E+E L++ G DTS ++
Sbjct: 604 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVL 658
>gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = -1
Query: 279 KKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV 115
KK GCS IE D + HEF++G+ HPR+ EIY ML E+E ++ G DTS ++
Sbjct: 535 KKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVL 589
>ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338275|gb|EFH68692.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 741
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = -1
Query: 279 KKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV 115
KK GCS IE D + HEF++G+ HPR+ EIY ML E+E L++ G DTS ++
Sbjct: 604 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVL 658
>ref|XP_007020019.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508725347|gb|EOY17244.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 646
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = -1
Query: 279 KKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDT 127
+K GCSFIE DG+ HEF+V + +HPR+ EI++ML E+ ++ VG + DT
Sbjct: 509 RKDPGCSFIELDGVVHEFLVEDDSHPRAKEIHSMLEEIAEQMRLVGYKPDT 559
>ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Capsella rubella]
gi|482575565|gb|EOA39752.1| hypothetical protein
CARUB_v10008399mg [Capsella rubella]
Length = 740
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -1
Query: 279 KKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV 115
KK GCS IE D + HEF++G+ HPR+ EIY ML E+E L+ G DTS ++
Sbjct: 603 KKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVL 657
>gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -1
Query: 279 KKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV 115
KK GCS IE D + HEF++G+ HPR+ EIY ML E+E L+ G DTS ++
Sbjct: 573 KKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVL 627
>ref|XP_003525660.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 737
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Frame = -1
Query: 279 KKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV-*FDL 103
KK GC+ IE DG+ HEF+VG+ HP+S I+ ML E++R L+ G DTS ++ D
Sbjct: 600 KKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDE 659
Query: 102 IWQ--THPQHSEE 70
W+ QHSE+
Sbjct: 660 EWKEGALTQHSEK 672
>gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -1
Query: 279 KKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV 115
KK GCS IE D + HEF++G+ HPR+ EIY ML E+E L+ G DTS ++
Sbjct: 558 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVL 612
>gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -1
Query: 279 KKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV 115
KK GCS IE D + HEF++G+ HPR+ EIY ML E+E L+ G DTS ++
Sbjct: 573 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVL 627
>gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -1
Query: 279 KKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV 115
KK GCS IE D + HEF++G+ HPR+ EIY ML E+E L+ G DTS ++
Sbjct: 533 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVL 587
>gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -1
Query: 279 KKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV 115
KK GCS IE D + HEF++G+ HPR+ EIY ML E+E L+ G DTS ++
Sbjct: 561 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVL 615
>gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -1
Query: 279 KKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV 115
KK GCS IE D + HEF++G+ HPR+ EIY ML E+E L+ G DTS ++
Sbjct: 573 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVL 627
>gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -1
Query: 279 KKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV 115
KK GCS IE D + HEF++G+ HPR+ EIY ML E+E L+ G DTS ++
Sbjct: 573 KKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVL 627
>ref|XP_002309169.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222855145|gb|EEE92692.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 619
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = -1
Query: 279 KKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYIV*FDL 103
KK G S+IE DG+ HEF+VG+ +HP S +IY LGEL + LK G T Y++ FD+
Sbjct: 482 KKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVL-FDI 539
>ref|XP_006364895.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Solanum tuberosum]
Length = 731
Score = 57.8 bits (138), Expect = 2e-06
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = -1
Query: 279 KKQTGCSFIEFDGIFHEFVVGNATHPRSAEIYTMLGELERGLKRVGSEQDTSYI-V*FDL 103
KK GC+ IE D + HEF+V + THP+S +IY ML E++R L+ G DTS + D
Sbjct: 594 KKVPGCTSIEIDRVVHEFLVSDRTHPQSNDIYKMLDEVDRLLEMAGHAPDTSEVHYEMDE 653
Query: 102 IWQTHP--QHSEE 70
W+ QHSE+
Sbjct: 654 EWKEEKLNQHSEK 666