BLASTX nr result
ID: Akebia25_contig00008061
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia25_contig00008061 (1122 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor... 535 e-149 ref|XP_007017900.1| Pseudouridine synthase family protein isofor... 513 e-143 ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl... 511 e-142 ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chlor... 510 e-142 ref|XP_002301949.1| pseudouridine synthase family protein [Popul... 506 e-141 ref|XP_007136120.1| hypothetical protein PHAVU_009G019500g [Phas... 504 e-140 ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl... 503 e-140 ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chl... 502 e-139 ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor... 497 e-138 ref|XP_007136119.1| hypothetical protein PHAVU_009G019500g [Phas... 495 e-137 ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour... 494 e-137 ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [A... 493 e-137 ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutr... 493 e-137 ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chlor... 493 e-137 emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera] 491 e-136 ref|XP_006302277.1| hypothetical protein CARUB_v10020321mg [Caps... 485 e-134 ref|NP_974151.1| RNA pseudourine synthase 2 [Arabidopsis thalian... 483 e-134 ref|XP_007017901.1| Pseudouridine synthase family protein isofor... 483 e-134 gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus... 482 e-133 gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus... 482 e-133 >ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis vinifera] gi|302141717|emb|CBI18920.3| unnamed protein product [Vitis vinifera] Length = 433 Score = 535 bits (1379), Expect = e-149 Identities = 269/352 (76%), Positives = 303/352 (86%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 SSRI +SRARVQSSIRSG VSVN R+++KVSHVI+ GDKVNCTISELQPLRAEPEDIPL Sbjct: 84 SSRIIGISRARVQSSIRSGLVSVNDRIVDKVSHVIRAGDKVNCTISELQPLRAEPEDIPL 143 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +IVYED HVLVVNKPAHMVVHPAPGNA+GTLVN ILHHCSLPTVAL N + SE +D SD Sbjct: 144 DIVYEDEHVLVVNKPAHMVVHPAPGNASGTLVNGILHHCSLPTVALPNRD--SEEDDISD 201 Query: 363 NEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFKQR 542 +E ++F+ Q+ C +IRPGIVHRLDKGTSGLLV+AKDEHSHAHLSEQFK Sbjct: 202 DEFNSFAAGQNCGT------CETNIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLH 255 Query: 543 TIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIEVL 722 +IHRVYISLT+GVP+P++GR+E+P+GRD NNRIRM AVPGPSN Q RHAASRYKVIE+L Sbjct: 256 SIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRIRMTAVPGPSNSGQARHAASRYKVIEIL 315 Query: 723 VGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRGNL 902 GGSALVEWRLETGRTHQIRAHAK+LGIPLLGDEVYGGTK+MALSLL+ R P+S G L Sbjct: 316 AAGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLLRPRIPSSHHGQL 375 Query: 903 SQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINTEK 1058 +QLVS+LDRPCLHA+ALGF HP TG+N FSC PP DFAEILS LR I+TEK Sbjct: 376 AQLVSRLDRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEILSWLRKISTEK 427 >ref|XP_007017900.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao] gi|508723228|gb|EOY15125.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao] Length = 433 Score = 513 bits (1322), Expect = e-143 Identities = 261/356 (73%), Positives = 297/356 (83%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 SSRI +SRARVQSSI+SG V+VNGRV++KVSH ++ GDKVNC ISELQPLRAEPEDIPL Sbjct: 87 SSRIQGISRARVQSSIKSGLVTVNGRVVDKVSHGLRHGDKVNCVISELQPLRAEPEDIPL 146 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +IVYED HVLVVNKP HMVVHPAPGNA GTLVN ILHHCSLPTVALS E+LS+ ED SD Sbjct: 147 DIVYEDDHVLVVNKPPHMVVHPAPGNATGTLVNGILHHCSLPTVALSEKEVLSDTEDVSD 206 Query: 363 NEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFKQR 542 + D+ G S+ S+RPGIVHRLDKGTSGLLV+AKDEHSH+HLSEQFKQ Sbjct: 207 D-------DEGFCYGASAAA---SVRPGIVHRLDKGTSGLLVVAKDEHSHSHLSEQFKQH 256 Query: 543 TIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIEVL 722 TI RVYISLT GVPSP AGR+++ IGRD NNR+RM+AVPG ++ + RHAASRYKVIEVL Sbjct: 257 TIQRVYISLTCGVPSPSAGRVDISIGRDSNNRVRMIAVPGLNHHGRARHAASRYKVIEVL 316 Query: 723 VGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRGNL 902 GGGSAL++WRLETGRTHQIRAHAK++GIPLLGDEVYGGTKSMALSLL+ RTP + L Sbjct: 317 AGGGSALIQWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMALSLLRPRTPPNYNDQL 376 Query: 903 SQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINTEKPSFK 1070 S+LVS+L+RP LHAL LGF+HPH+ E FSC PP DFAEILS LR I TEKP+FK Sbjct: 377 SRLVSRLERPYLHALVLGFEHPHSREMMHFSCQPPPDFAEILSDLRKIGTEKPTFK 432 >ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus sinensis] Length = 421 Score = 511 bits (1317), Expect = e-142 Identities = 265/354 (74%), Positives = 288/354 (81%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 SSRI +SRARVQSSIRSG VS+NG+V++KVSH +K GD VNCTISELQPLRAE EDIPL Sbjct: 78 SSRIDGISRARVQSSIRSGLVSINGQVVSKVSHNVKGGDMVNCTISELQPLRAEAEDIPL 137 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +IVYED +VLVVNKPAHMVVHPAPGNA GTLVN ILHHCSLPT+A SN E S+ ED SD Sbjct: 138 DIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLPTLASSNQEAFSDAEDISD 197 Query: 363 NEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFKQR 542 +E SS I G SIRPGIVHRLDKGTSGLLV+AKDEHSHAHLSEQFK Sbjct: 198 DE------------EFSSSISGASIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLH 245 Query: 543 TIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIEVL 722 TI RVYISLT+GVPS +GRIEVPI RD NNRIRM A+PG + Q RHAASRYKVIE+L Sbjct: 246 TIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAAIPGSNKHGQARHAASRYKVIEIL 305 Query: 723 VGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRGNL 902 GGGSALVEWRLETGRTHQIRAHAK++GIPLLGDEVYGGTK+MA SLLQ RT G + Sbjct: 306 AGGGSALVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKNMAKSLLQPRTAPGSHGKV 365 Query: 903 SQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINTEKPS 1064 +LVS L RPCLHA+ALGF HPHT E QFSCPPPADFAEILS LR I TEK S Sbjct: 366 LKLVSGLQRPCLHAVALGFTHPHTREKIQFSCPPPADFAEILSQLREIGTEKLS 419 >ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Solanum lycopersicum] Length = 436 Score = 510 bits (1314), Expect = e-142 Identities = 257/357 (71%), Positives = 297/357 (83%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 SSRI VSRARVQSSIRSG VSVNGRV +KVSH++K GDKV+CTI++L+PLRAEPEDIPL Sbjct: 78 SSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEPEDIPL 137 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +IVYED HVLVVNKPAHMVVHPAPGNA GTLV+ ILHHCSLPTV+ E+LS+ ED SD Sbjct: 138 DIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSDGEDASD 197 Query: 363 NEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFKQR 542 +E++ FS ++S SS +C S+RPGIVHRLDKGTSGLLV+AK+EHS A L+EQFK+ Sbjct: 198 DELNIFSPNRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVAKNEHSLADLAEQFKKH 257 Query: 543 TIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIEVL 722 TI RVY+S+T GVP+ +AGR+++PIGRD NNRIRM A+PG + RHA SRYKVIE L Sbjct: 258 TIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRYKVIEKL 317 Query: 723 VGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRGNL 902 GGGSALVEWRLETGRTHQIRAHAKHLGIPL+GDEVYGGTK+MALSLLQ +TP G L Sbjct: 318 AGGGSALVEWRLETGRTHQIRAHAKHLGIPLMGDEVYGGTKNMALSLLQPKTPPMFHGEL 377 Query: 903 SQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINTEKPSFKN 1073 SQLVS++DRPCLHAL LGF+HP TGEN F+ PP DFAEILS LR I TEK + N Sbjct: 378 SQLVSQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSELRAIKTEKVTHPN 434 >ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa] gi|222843675|gb|EEE81222.1| pseudouridine synthase family protein [Populus trichocarpa] Length = 444 Score = 506 bits (1302), Expect = e-141 Identities = 263/356 (73%), Positives = 293/356 (82%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 SSRIS +SRARVQSSI+SG VSVNG+VI+KVSH +K GDKVNC ISELQPLRAEPE+IPL Sbjct: 101 SSRISGISRARVQSSIKSGLVSVNGKVIDKVSHNVKAGDKVNCVISELQPLRAEPENIPL 160 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +IVYED +VLVVNKPAHMVVHPAPGNA GTLVN ILHHCSLPTV S+ E+LS ED SD Sbjct: 161 DIVYEDENVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLPTV--SSQEVLSGAEDVSD 218 Query: 363 NEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFKQR 542 ++ EGL S S+RPGIVHRLDKGTSGLLV+AKDEHSHAHLSEQFK Sbjct: 219 DD----------DEGLCSSSYAASVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLH 268 Query: 543 TIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIEVL 722 TI RVY+SLT GVP+PMAGRI+VPIGRD++NRIRM A+ P N Q RHAASRYKVIE+L Sbjct: 269 TIKRVYVSLTCGVPAPMAGRIDVPIGRDVSNRIRMAAIVEP-NRGQARHAASRYKVIEIL 327 Query: 723 VGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRGNL 902 GGGSALVEWRLETGRTHQIRAHAK++GIPLLGDEVYGGT++MALSLL+ RT SC L Sbjct: 328 AGGGSALVEWRLETGRTHQIRAHAKYIGIPLLGDEVYGGTQNMALSLLRSRTQPSCHRQL 387 Query: 903 SQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINTEKPSFK 1070 S +S L+RPCLHALALGF HP TG+ FSCPPP DF EILS LR + TEK SFK Sbjct: 388 SLSLSGLERPCLHALALGFTHPCTGKEIHFSCPPPPDFTEILSQLREMGTEKLSFK 443 >ref|XP_007136120.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris] gi|561009207|gb|ESW08114.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris] Length = 447 Score = 504 bits (1297), Expect = e-140 Identities = 251/360 (69%), Positives = 292/360 (81%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 SSRI+ +SRARVQSSI+SG V VNGRV++K S +K GD++ CTI+ELQ LRA PE+IPL Sbjct: 88 SSRINGISRARVQSSIKSGLVHVNGRVVDKASFNVKAGDQIKCTIAELQKLRAVPENIPL 147 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +IVYED HVLV+NKPAHMVVHPAPGN +GTLVN ILHHC+LP V S E LS+ ED D Sbjct: 148 DIVYEDEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKEEGLSDTED-CD 206 Query: 363 NEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFKQR 542 +E++++ SS EG SR SIRPGIVHRLDKGTSGLLV+AKDEHSH LSEQFKQR Sbjct: 207 DEVNSYGSLASSCEGSHSRPSMSSIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKQR 266 Query: 543 TIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIEVL 722 TI RVY+SLTAGVP P++GR++VP+GRDLNNR+RM AV GP N R+ RHAASRYKVIE+L Sbjct: 267 TIKRVYVSLTAGVPRPISGRVDVPVGRDLNNRLRMTAVAGPVNSRKARHAASRYKVIEIL 326 Query: 723 VGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRGNL 902 GG +LVEW+LETGRTHQIRAHAK+LG+PLLGDEVYGGTKSM LSLL+ R+P S G + Sbjct: 327 AGGSCSLVEWKLETGRTHQIRAHAKYLGVPLLGDEVYGGTKSMVLSLLRPRSPISLHGKI 386 Query: 903 SQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINTEKPSFKN*SD 1082 Q+VS LDRPCLHAL LGF+HPHTGE FSC PP DF EILS LR I +E SF S+ Sbjct: 387 VQMVSSLDRPCLHALTLGFQHPHTGEQVHFSCEPPVDFDEILSQLRRIGSESVSFSKPSN 446 >ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Solanum tuberosum] Length = 431 Score = 503 bits (1294), Expect = e-140 Identities = 252/352 (71%), Positives = 295/352 (83%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 SSRI VSRARVQSSIRSG VSVNGRV +KVSH++K GDKV+CTI++L+PLRAEPEDIPL Sbjct: 78 SSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEPEDIPL 137 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +IV+ED HVLVVNKPAHMVVHPAPGNA GTLV+ ILHHCSLPT++ E+LS+ ED SD Sbjct: 138 DIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTISFLGEEVLSDAEDASD 197 Query: 363 NEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFKQR 542 +E++ FS ++S SS +C S+RPGIVHRLDKGTSGLLV+AK+E+S A L+EQFK+ Sbjct: 198 DELNVFSGNRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVAKNENSLASLAEQFKKH 257 Query: 543 TIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIEVL 722 TI RVY+S+T GVP+ +AGR+++PIGRD NNRIRM A+PG + RHA SRYKVIE L Sbjct: 258 TIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRYKVIEKL 317 Query: 723 VGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRGNL 902 GGSALVEWRLETGRTHQIRAHAK+LGIPL+GDEVYGGTK+MALSLLQ +TP G L Sbjct: 318 ARGGSALVEWRLETGRTHQIRAHAKYLGIPLMGDEVYGGTKNMALSLLQPKTPPMFHGKL 377 Query: 903 SQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINTEK 1058 SQLVS++DRPCLHAL LGF+HP TGEN F+ PP DFAEILS LR INTEK Sbjct: 378 SQLVSQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSYLRAINTEK 429 >ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like isoform X1 [Glycine max] gi|571448797|ref|XP_006577958.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like isoform X2 [Glycine max] Length = 450 Score = 502 bits (1293), Expect = e-139 Identities = 250/357 (70%), Positives = 296/357 (82%), Gaps = 2/357 (0%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 SSRI+ +SRARVQSSI+SG V VNGRV++KVS +K GD++ CTI+ELQ LRA P++IPL Sbjct: 89 SSRINGISRARVQSSIKSGLVHVNGRVVDKVSFNVKSGDEIKCTIAELQNLRAVPQNIPL 148 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +IVYED HVLV+NKPAHMVVHPAPGN +GTLVN ILHHC+LP V S E LS+ ED SD Sbjct: 149 DIVYEDEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTED-SD 207 Query: 363 NEISNFSLDQSSREGLSSR--ICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFK 536 +E +++ SS EGL+SR + +SIRPGIVHRLDKGTSGLLV+AKDEHSH LSEQFK Sbjct: 208 DEFNSYISLASSCEGLNSRLSVASNSIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFK 267 Query: 537 QRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIE 716 QRTI R+Y+SLTAGVP+P+AGR+EVP+GRD NNRIRM AV GP N ++ R+AASRYKVIE Sbjct: 268 QRTIKRLYVSLTAGVPTPVAGRVEVPVGRDTNNRIRMTAVTGPVNSKKARYAASRYKVIE 327 Query: 717 VLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRG 896 +L GG +LVEW+LETGRTHQIRAHAK+LG+PLLGDE+YGGTKSM LSLL+ RTP S Sbjct: 328 ILAGGSCSLVEWKLETGRTHQIRAHAKYLGVPLLGDELYGGTKSMVLSLLRPRTPISLHS 387 Query: 897 NLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINTEKPSF 1067 + ++VS+LDRPCLHA LGF+HPHTGE FSC PPADFAEILS LR I +E SF Sbjct: 388 KIVKMVSRLDRPCLHAWTLGFQHPHTGEQVHFSCEPPADFAEILSQLRRIGSETVSF 444 >ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis sativus] Length = 453 Score = 497 bits (1279), Expect = e-138 Identities = 252/352 (71%), Positives = 288/352 (81%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 S RI+ +SRARVQSSIR+G VSVNGRVI+KVSH +K GD +NCTISELQPLRAEPEDI L Sbjct: 84 SCRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDL 143 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +IVYED HVLVVNKPAHMVVHPAPGNA GTLVNAIL+HCSLP VA S GE ++SD Sbjct: 144 DIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGE------NESD 197 Query: 363 NEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFKQR 542 +++S+ D+ S G+ SR+ IRPGIVHRLDKGTSGLLV+AKDEHSHAHLS QFKQ Sbjct: 198 SDVSD---DEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQH 254 Query: 543 TIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIEVL 722 +I RVYISLT GVP AGRIE+PI RD NNRIRM A+ G N ++AASRY V+E+L Sbjct: 255 SIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEIL 314 Query: 723 VGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRGNL 902 GGS+LVEWRLETGRTHQIRAHAK++GIPLLGDEVYGGTKSMA+SLL+ R ++C G L Sbjct: 315 AQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQL 374 Query: 903 SQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINTEK 1058 QLVS L+RPCLHAL LGF HPHTG+N +FSCPPP DF EILS LR I T+K Sbjct: 375 MQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLREIGTQK 426 >ref|XP_007136119.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris] gi|561009206|gb|ESW08113.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris] Length = 458 Score = 495 bits (1275), Expect = e-137 Identities = 251/371 (67%), Positives = 292/371 (78%), Gaps = 11/371 (2%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINK-----------VSHVIKVGDKVNCTISELQ 149 SSRI+ +SRARVQSSI+SG V VNGRV++K S +K GD++ CTI+ELQ Sbjct: 88 SSRINGISRARVQSSIKSGLVHVNGRVVDKKSKHQPEQYALASFNVKAGDQIKCTIAELQ 147 Query: 150 PLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNG 329 LRA PE+IPL+IVYED HVLV+NKPAHMVVHPAPGN +GTLVN ILHHC+LP V S Sbjct: 148 KLRAVPENIPLDIVYEDEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKE 207 Query: 330 EILSELEDDSDNEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHS 509 E LS+ ED D+E++++ SS EG SR SIRPGIVHRLDKGTSGLLV+AKDEHS Sbjct: 208 EGLSDTED-CDDEVNSYGSLASSCEGSHSRPSMSSIRPGIVHRLDKGTSGLLVVAKDEHS 266 Query: 510 HAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRH 689 H LSEQFKQRTI RVY+SLTAGVP P++GR++VP+GRDLNNR+RM AV GP N R+ RH Sbjct: 267 HMKLSEQFKQRTIKRVYVSLTAGVPRPISGRVDVPVGRDLNNRLRMTAVAGPVNSRKARH 326 Query: 690 AASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQ 869 AASRYKVIE+L GG +LVEW+LETGRTHQIRAHAK+LG+PLLGDEVYGGTKSM LSLL+ Sbjct: 327 AASRYKVIEILAGGSCSLVEWKLETGRTHQIRAHAKYLGVPLLGDEVYGGTKSMVLSLLR 386 Query: 870 CRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNIN 1049 R+P S G + Q+VS LDRPCLHAL LGF+HPHTGE FSC PP DF EILS LR I Sbjct: 387 PRSPISLHGKIVQMVSSLDRPCLHALTLGFQHPHTGEQVHFSCEPPVDFDEILSQLRRIG 446 Query: 1050 TEKPSFKN*SD 1082 +E SF S+ Sbjct: 447 SESVSFSKPSN 457 >ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2, chloroplastic-like [Cucumis sativus] Length = 452 Score = 494 bits (1271), Expect = e-137 Identities = 252/352 (71%), Positives = 289/352 (82%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 S RI+ +SRARVQSSIR+G VSVNGRVI+KVSH +K GD +NCTISELQPLRAEPEDI L Sbjct: 84 SCRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDL 143 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +IVYED HVLVVNKPAHMVVHPAPGNA GTLVNAIL+HCSLP VA S GE ++SD Sbjct: 144 DIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGE------NESD 197 Query: 363 NEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFKQR 542 +++S+ D+ S G+ SR+ IRPGIVHRLDKGTSGLLV+AKDEHSHAHLS QFKQ Sbjct: 198 SDVSD---DEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQH 254 Query: 543 TIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIEVL 722 +I RVYISLT GVP AGRIE+PI RD NNRIRM A+ G +N ++AASRY V+E+L Sbjct: 255 SIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTNN-PHAKYAASRYNVMEIL 313 Query: 723 VGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRGNL 902 GGS+LVEWRLETGRTHQIRAHAK++GIPLLGDEVYGGTKSMA+SLL+ R ++C G L Sbjct: 314 AQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQL 373 Query: 903 SQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINTEK 1058 QLVS L+RPCLHAL LGF HPHTG+N +FSCPPP DF EILS LR I T+K Sbjct: 374 MQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLREIGTQK 425 >ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [Amborella trichopoda] gi|548833830|gb|ERM96267.1| hypothetical protein AMTR_s00001p00157430 [Amborella trichopoda] Length = 452 Score = 493 bits (1269), Expect = e-137 Identities = 244/350 (69%), Positives = 282/350 (80%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 S+RI VSRAR+QSSIR G V VNG I KVSH++KVGD V+CT+S LQPL+AEPED+PL Sbjct: 90 SARIGDVSRARIQSSIRQGFVKVNGLPITKVSHIVKVGDMVDCTVSHLQPLKAEPEDMPL 149 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +I+YED HVLVVNKPAHMVVHPAPGNANGTLVN ILHHC+LP L +GE+ SE +D+ D Sbjct: 150 DIIYEDDHVLVVNKPAHMVVHPAPGNANGTLVNGILHHCTLPAFGLPDGELTSESDDECD 209 Query: 363 NEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFKQR 542 N ++ F+ D S + C SIRPGIVHRLDKGTSGLLV+AK+EHSHAHLSEQFK Sbjct: 210 NGLTMFNPDPISTQ------CRSSIRPGIVHRLDKGTSGLLVVAKNEHSHAHLSEQFKLH 263 Query: 543 TIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIEVL 722 TIHR YISLT GVPSP G IE+PI RD+NNRIRM AV G +N R+ R A SRY V+EVL Sbjct: 264 TIHRQYISLTCGVPSPSNGCIEIPIARDMNNRIRMAAVSGQNNTRKARLATSRYHVMEVL 323 Query: 723 VGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRGNL 902 GGGSALVEWRL+TGRTHQIR HAK++G PLLGDEVYGGTKSMALS L+ RTP+ G L Sbjct: 324 AGGGSALVEWRLQTGRTHQIRVHAKYIGNPLLGDEVYGGTKSMALSRLRPRTPSHYHGPL 383 Query: 903 SQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINT 1052 SQLVS L RPCLHA +LGFKHPH+ EN F+CPPP DFAE+L L++I + Sbjct: 384 SQLVSNLQRPCLHAFSLGFKHPHSKENVLFTCPPPPDFAEVLRQLQSIRS 433 >ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutrema salsugineum] gi|557086678|gb|ESQ27530.1| hypothetical protein EUTSA_v10018588mg [Eutrema salsugineum] Length = 432 Score = 493 bits (1268), Expect = e-137 Identities = 249/352 (70%), Positives = 286/352 (81%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 SSR+ VSRARVQSSIR G VSVNGRV++KVSH +K GD+VNCTISELQPL+AEPEDIPL Sbjct: 90 SSRVHGVSRARVQSSIRLGLVSVNGRVVDKVSHNVKAGDEVNCTISELQPLKAEPEDIPL 149 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +IVYED H+LVVNKPAHMVVHPAPGN GTLVN ILHHCSLP VA SN E DDSD Sbjct: 150 DIVYEDKHLLVVNKPAHMVVHPAPGNPTGTLVNGILHHCSLPCVAYSNPE------DDSD 203 Query: 363 NEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFKQR 542 E + + +S L++ S+RPGIVHRLDKGTSGLLV+AKDEHSHAHL+EQFK Sbjct: 204 EETLSDDEEMTSSSSLAA-----SVRPGIVHRLDKGTSGLLVVAKDEHSHAHLAEQFKLH 258 Query: 543 TIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIEVL 722 TI RVYISLT+GVPSP GR+++PIGRD NNRIRM A+PG + + RHAASRYKVIE L Sbjct: 259 TIERVYISLTSGVPSPSQGRVDIPIGRDPNNRIRMAAIPGSLSRGKARHAASRYKVIETL 318 Query: 723 VGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRGNL 902 GGGSALVEWRLETGRTHQIRAHAK++G+PLLGDEVYGGTKS+ALSLLQ R S + + Sbjct: 319 AGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSVALSLLQRRVSRSDQEQI 378 Query: 903 SQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINTEK 1058 +LVS++DRPCLHA+ LGF+HP TGE +FSCPPP+D AEI+ LLR EK Sbjct: 379 LELVSRMDRPCLHAIVLGFEHPCTGEVVKFSCPPPSDLAEIVGLLRRSGREK 430 >ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cicer arietinum] Length = 438 Score = 493 bits (1268), Expect = e-137 Identities = 242/351 (68%), Positives = 288/351 (82%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 SSRI+ +SRARVQSSI++G V VNGR+++KVS ++ GD++ CTI+ELQ LRA PE+IPL Sbjct: 89 SSRINGISRARVQSSIKAGLVHVNGRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPL 148 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +IVYED H+LV+NKPAHMVVHPAPGN +GTLVN ILHHC+LP V S E LS+ ED SD Sbjct: 149 DIVYEDEHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTED-SD 207 Query: 363 NEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFKQR 542 +E++ F+ S EGL SR+ SIRPGIVHRLDKGTSGLLV+AKDEHSH LSEQFK R Sbjct: 208 DELNGFTSQAPSCEGLDSRLSIASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLR 267 Query: 543 TIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIEVL 722 TI RVYISLTAGVP+P+AGR+EVP+GRD NNR+RM AV GP + RHAASRYKVIE+L Sbjct: 268 TIKRVYISLTAGVPTPVAGRVEVPVGRDPNNRLRMTAVAGPLTSMKARHAASRYKVIEIL 327 Query: 723 VGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRGNL 902 GG ALVEW+LETGRTHQIRAHA++LG+PLLGDEVYGGTK+M LSLL+ RT S G + Sbjct: 328 AGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEM 387 Query: 903 SQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINTE 1055 +++VS+LDRPCLHA+ LGF+HPHTGE FSC PP DF EILS LR I + Sbjct: 388 TKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIGRQ 438 >emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera] Length = 611 Score = 491 bits (1263), Expect = e-136 Identities = 258/379 (68%), Positives = 292/379 (77%), Gaps = 27/379 (7%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINK---------------------------VSH 101 SSRI +SRARVQSSIRSG VSVN R+++K VSH Sbjct: 213 SSRIIGISRARVQSSIRSGLVSVNDRIVDKAMLVSRKFEVGEGKKIEEKDPITYSEQVSH 272 Query: 102 VIKVGDKVNCTISELQPLRAEPEDIPLNIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVN 281 VI+ GDKVNCTISELQPLRAEPEDIPL+IVYED HV VHPAPGNA+GTLVN Sbjct: 273 VIRAGDKVNCTISELQPLRAEPEDIPLDIVYEDEHV----------VHPAPGNASGTLVN 322 Query: 282 AILHHCSLPTVALSNGEILSELEDDSDNEISNFSLDQSSREGLSSRICGDSIRPGIVHRL 461 ILHHCSLPTVAL N + SE +D D+E ++F+ Q+ C +IRPGIVHRL Sbjct: 323 GILHHCSLPTVALPNRD--SEEDDILDDEFNSFAAGQNCGT------CETNIRPGIVHRL 374 Query: 462 DKGTSGLLVIAKDEHSHAHLSEQFKQRTIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRI 641 DKGTSGLLV+AKDEHSHAHLSEQFK +IHRVYISLT+GVP+P++GR+E+P+GRD NNRI Sbjct: 375 DKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRI 434 Query: 642 RMVAVPGPSNCRQVRHAASRYKVIEVLVGGGSALVEWRLETGRTHQIRAHAKHLGIPLLG 821 RM AVPGPSN Q RHAASRYKVIE+L GGSALVEWRLETGRTHQIRAHAK+LGIPLLG Sbjct: 435 RMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLLG 494 Query: 822 DEVYGGTKSMALSLLQCRTPASCRGNLSQLVSKLDRPCLHALALGFKHPHTGENTQFSCP 1001 DEVYGGTK+MALSLL+ R P+S G L+QLVS+LDRPCLHA+ALGF HP TG+N FSC Sbjct: 495 DEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSCQ 554 Query: 1002 PPADFAEILSLLRNINTEK 1058 PP DFAEILS LR I+TEK Sbjct: 555 PPEDFAEILSWLRKISTEK 573 >ref|XP_006302277.1| hypothetical protein CARUB_v10020321mg [Capsella rubella] gi|482570987|gb|EOA35175.1| hypothetical protein CARUB_v10020321mg [Capsella rubella] Length = 432 Score = 485 bits (1248), Expect = e-134 Identities = 249/351 (70%), Positives = 284/351 (80%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 SSRI+ VSRARVQSSIR G V+VNGRV++KVSH +K GD+VNCTISELQPL+AE EDIPL Sbjct: 89 SSRINGVSRARVQSSIRLGLVTVNGRVVDKVSHNVKAGDEVNCTISELQPLKAEAEDIPL 148 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +IVYED HVLVVNKPAHMVVHPAPGN GTLVN ILHHCSLP+VA S+ E +DDSD Sbjct: 149 DIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNGILHHCSLPSVAYSSPE-----DDDSD 203 Query: 363 NEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFKQR 542 +E +FS E SS S+RPGIVHRLDKGT+GLLV+AKDEHSHAHL+EQFK Sbjct: 204 DE--SFS---DGEEMTSSSSYAASVRPGIVHRLDKGTTGLLVVAKDEHSHAHLAEQFKLH 258 Query: 543 TIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIEVL 722 TI RVY+SLT GVPSP GRIE+PIGRD +NRIRM A+PG + + RHAASRYKVIE L Sbjct: 259 TIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAAIPGGLSSGRARHAASRYKVIETL 318 Query: 723 VGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRGNL 902 GGGSALVEWRLETGRTHQIRAHAK++G+PLLGDEVYGGTKSMALSLLQ R S + + Sbjct: 319 AGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSMALSLLQKRVCRSDQDEI 378 Query: 903 SQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINTE 1055 +L+S+LDRPCLHA+ LGF HP TG+ +FSCPPP D AEI+ LLR E Sbjct: 379 IELISRLDRPCLHAIVLGFTHPCTGKIVKFSCPPPPDLAEIVGLLRRSGRE 429 >ref|NP_974151.1| RNA pseudourine synthase 2 [Arabidopsis thaliana] gi|122215273|sp|Q3ECD0.1|PUS2_ARATH RecName: Full=RNA pseudouridine synthase 2, chloroplastic; AltName: Full=RNA pseudouridylate synthase 2; AltName: Full=RNA-uridine isomerase 2; Flags: Precursor gi|332197669|gb|AEE35790.1| RNA pseudourine synthase 2 [Arabidopsis thaliana] Length = 430 Score = 483 bits (1243), Expect = e-134 Identities = 248/346 (71%), Positives = 280/346 (80%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 SSRI+ VSRARVQSSIR G V+VNGRV++KVSH +K GD+VNCTISELQPL+AE EDIPL Sbjct: 89 SSRINGVSRARVQSSIRLGLVTVNGRVVDKVSHNVKSGDEVNCTISELQPLKAEAEDIPL 148 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +IVYED HVLVVNKPAHMVVHPAPGN GTLVN ILHHCSLP V SN SE +DDSD Sbjct: 149 DIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNGILHHCSLPCVDYSN----SEEDDDSD 204 Query: 363 NEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFKQR 542 E FS D+ SS S+RPGIVHRLDKGT+GLLV+AKDEHSHAHL+EQFK Sbjct: 205 EE--TFSDDEEMTTSPSSYAA--SVRPGIVHRLDKGTTGLLVVAKDEHSHAHLAEQFKLH 260 Query: 543 TIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIEVL 722 TI RVY+SLT GVPSP GRIE+PIGRD +NRIRM A+PG + RHAASRYKVIE Sbjct: 261 TIERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAAIPGGVRGGRARHAASRYKVIETF 320 Query: 723 VGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRGNL 902 GGGSALVEWRLETGRTHQIRAHAK++G+PLLGDEVYGGTKSMALSLLQ R S + + Sbjct: 321 AGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSMALSLLQKRVSRSDQEEI 380 Query: 903 SQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLR 1040 +L+S++DRPCLHA+ LGF HP TGE +FSCPPP+D AEI+ LLR Sbjct: 381 IELISRMDRPCLHAIVLGFTHPCTGEIVKFSCPPPSDLAEIVGLLR 426 >ref|XP_007017901.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma cacao] gi|508723229|gb|EOY15126.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma cacao] Length = 409 Score = 483 bits (1242), Expect = e-134 Identities = 251/356 (70%), Positives = 286/356 (80%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 SSRI +SRARVQSSI+SG V+VNGRV++KVSH ++ GDKVNC ISELQPLRAEPEDIPL Sbjct: 74 SSRIQGISRARVQSSIKSGLVTVNGRVVDKVSHGLRHGDKVNCVISELQPLRAEPEDIPL 133 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +IVYED HVLVVNKP HMVVHPAPGNA GTLVN ILHHCSLPTVALS E+LS+ ED SD Sbjct: 134 DIVYEDDHVLVVNKPPHMVVHPAPGNATGTLVNGILHHCSLPTVALSEKEVLSDTEDVSD 193 Query: 363 NEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFKQR 542 + D+ G S+ S+RPGIVHRLDKGTSGLLV+AK FKQ Sbjct: 194 D-------DEGFCYGASAAA---SVRPGIVHRLDKGTSGLLVVAK-----------FKQH 232 Query: 543 TIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIEVL 722 TI RVYISLT GVPSP AGR+++ IGRD NNR+RM+AVPG ++ + RHAASRYKVIEVL Sbjct: 233 TIQRVYISLTCGVPSPSAGRVDISIGRDSNNRVRMIAVPGLNHHGRARHAASRYKVIEVL 292 Query: 723 VGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRGNL 902 GGGSAL++WRLETGRTHQIRAHAK++GIPLLGDEVYGGTKSMALSLL+ RTP + L Sbjct: 293 AGGGSALIQWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMALSLLRPRTPPNYNDQL 352 Query: 903 SQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINTEKPSFK 1070 S+LVS+L+RP LHAL LGF+HPH+ E FSC PP DFAEILS LR I TEKP+FK Sbjct: 353 SRLVSRLERPYLHALVLGFEHPHSREMMHFSCQPPPDFAEILSDLRKIGTEKPTFK 408 >gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus guttatus] Length = 422 Score = 482 bits (1241), Expect = e-133 Identities = 245/352 (69%), Positives = 288/352 (81%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 SSRI+ +SRARVQSSIRSG VSVNG VI+KVSHV++ GD VNCTI+ELQPLRAEPE+IPL Sbjct: 82 SSRINGISRARVQSSIRSGLVSVNGHVISKVSHVVRDGDSVNCTIAELQPLRAEPENIPL 141 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +IVYED H+LVVNKPAHMVVHPAPGNANGTLVN ILHHC L TV N E L + DD D Sbjct: 142 DIVYEDDHLLVVNKPAHMVVHPAPGNANGTLVNGILHHCRLSTVCF-NPESLPDNIDDDD 200 Query: 363 NEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFKQR 542 S+D+++ S S+RPGIVHRLDKGTSGLLV+AKDEHSH+HL+EQFK+ Sbjct: 201 ------SIDEATVFPSES-----SVRPGIVHRLDKGTSGLLVVAKDEHSHSHLAEQFKKH 249 Query: 543 TIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIEVL 722 T+ RVY+SLT GVPSP++GR+++PIGRD NNRIRMVA+PG + + RHA SRYKV+E+L Sbjct: 250 TVKRVYVSLTCGVPSPVSGRVDIPIGRDSNNRIRMVAIPGSALHGKARHAVSRYKVVEIL 309 Query: 723 VGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRGNL 902 GGG ALVEWRLETGRTHQIRAHAK+LGIPLLGD+VYGGTK MALS LQ + +S G + Sbjct: 310 AGGGCALVEWRLETGRTHQIRAHAKYLGIPLLGDDVYGGTKHMALSQLQSKNSSSYYGQI 369 Query: 903 SQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINTEK 1058 QLV+KL+RP LHAL+LGF+HPH GE+ FS PP DFAEIL LRNI++EK Sbjct: 370 HQLVAKLERPSLHALSLGFRHPHKGEDLHFSQMPPFDFAEILDCLRNISSEK 421 >gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus guttatus] Length = 432 Score = 482 bits (1241), Expect = e-133 Identities = 245/352 (69%), Positives = 288/352 (81%) Frame = +3 Query: 3 SSRISCVSRARVQSSIRSGHVSVNGRVINKVSHVIKVGDKVNCTISELQPLRAEPEDIPL 182 SSRI+ +SRARVQSSIRSG VSVNG VI+KVSHV++ GD VNCTI+ELQPLRAEPE+IPL Sbjct: 82 SSRINGISRARVQSSIRSGLVSVNGHVISKVSHVVRDGDSVNCTIAELQPLRAEPENIPL 141 Query: 183 NIVYEDTHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCSLPTVALSNGEILSELEDDSD 362 +IVYED H+LVVNKPAHMVVHPAPGNANGTLVN ILHHC L TV N E L + DD D Sbjct: 142 DIVYEDDHLLVVNKPAHMVVHPAPGNANGTLVNGILHHCRLSTVCF-NPESLPDNIDDDD 200 Query: 363 NEISNFSLDQSSREGLSSRICGDSIRPGIVHRLDKGTSGLLVIAKDEHSHAHLSEQFKQR 542 S+D+++ S S+RPGIVHRLDKGTSGLLV+AKDEHSH+HL+EQFK+ Sbjct: 201 ------SIDEATVFPSES-----SVRPGIVHRLDKGTSGLLVVAKDEHSHSHLAEQFKKH 249 Query: 543 TIHRVYISLTAGVPSPMAGRIEVPIGRDLNNRIRMVAVPGPSNCRQVRHAASRYKVIEVL 722 T+ RVY+SLT GVPSP++GR+++PIGRD NNRIRMVA+PG + + RHA SRYKV+E+L Sbjct: 250 TVKRVYVSLTCGVPSPVSGRVDIPIGRDSNNRIRMVAIPGSALHGKARHAVSRYKVVEIL 309 Query: 723 VGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDEVYGGTKSMALSLLQCRTPASCRGNL 902 GGG ALVEWRLETGRTHQIRAHAK+LGIPLLGD+VYGGTK MALS LQ + +S G + Sbjct: 310 AGGGCALVEWRLETGRTHQIRAHAKYLGIPLLGDDVYGGTKHMALSQLQSKNSSSYYGQI 369 Query: 903 SQLVSKLDRPCLHALALGFKHPHTGENTQFSCPPPADFAEILSLLRNINTEK 1058 QLV+KL+RP LHAL+LGF+HPH GE+ FS PP DFAEIL LRNI++EK Sbjct: 370 HQLVAKLERPSLHALSLGFRHPHKGEDLHFSQMPPFDFAEILDCLRNISSEK 421