BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00007773
         (3857 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...  1746   0.0  
emb|CBI21137.3| unnamed protein product [Vitis vinifera]             1723   0.0  
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...  1699   0.0  
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub...  1697   0.0  
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr...  1690   0.0  
ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob...  1683   0.0  
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...  1681   0.0  
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a...  1679   0.0  
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub...  1664   0.0  
ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prun...  1657   0.0  
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [...  1647   0.0  
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...  1637   0.0  
ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D sub...  1622   0.0  
gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus n...  1607   0.0  
ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D sub...  1603   0.0  
gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus...  1598   0.0  
ref|NP_001054041.1| Os04g0641000 [Oryza sativa Japonica Group] g...  1582   0.0  
emb|CAE05960.2| OSJNBa0063C18.1 [Oryza sativa Japonica Group]        1582   0.0  
ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV a...  1581   0.0  
ref|XP_007136942.1| hypothetical protein PHAVU_009G087100g [Phas...  1577   0.0  

>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score = 1746 bits (4521), Expect = 0.0
 Identities = 847/1164 (72%), Positives = 978/1164 (84%), Gaps = 5/1164 (0%)
 Frame = +1

Query: 151  LSEELLTKFCRQASMEFFSEYGLISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKK 330
            L++E L  FC++ ++ FF+EYGLI HQI+S+N FI+NGIQ++FDS GEI VEPGYDPSK+
Sbjct: 41   LNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDPSKR 100

Query: 331  GQGEWRYAAVTFGKVTLEPPTFWSTEKPQKDSKEFLKLMPRHARLQNMTYSSRMKVEMSV 510
            G+G+WRYA+V FGKVTLE P  W+ E    D KE L  +PRHARLQNMTYSSRMK ++  
Sbjct: 101  GEGDWRYASVRFGKVTLERPRVWAGES---DGKESLNFLPRHARLQNMTYSSRMKAQVHF 157

Query: 511  QVYTQKLMKSDKFKTGKE-QFVQKHVESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDF 687
            QVYTQKL++SDK+KTGK+ ++V+K V  ED RD+LIGRIPVMV+S LCWMNG+++GDC++
Sbjct: 158  QVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCEY 217

Query: 688  DHGGYFLIKGAEKTFIAQEQICLKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESI 867
            DHGGYFLIKGAEKTFIAQEQICLKRLWVS  P W VAYR   KR+RVY+KL    +  + 
Sbjct: 218  DHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPKDENNR 277

Query: 868  QGLKILNVQFLSMSIPLWILFFYLGMSSDREIIEMIDVNLDDPILVNILIATIKYADENC 1047
             G K+L V F S  IP+WILFF LG SSD+E++++ID N+DD  + NIL+A+I  AD   
Sbjct: 278  GGEKVLTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHEADREA 337

Query: 1048 EG----FRKEGKPLKYIDDLMSQTKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKC 1215
            E     FR++G  + ++D L+   KFPPGE I++C+ KYLFP    +K KA FLGYMVKC
Sbjct: 338  EKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKC 397

Query: 1216 LLLSYTGRRKCENRDDFRNKXXXXXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRP 1395
            LL +YTGRRKC+NRDDFRNK              VHIRHAERRMVKAMQR+LYGDR+LRP
Sbjct: 398  LLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRP 457

Query: 1396 IEHYLDASIITNGLSRAFSTGAWSHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVA 1575
            IE+YLDASIITNGLSRAFSTG WSHPFKR ER +GVVATLRRTNPLQMTAD+RKTRQQV 
Sbjct: 458  IENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQ 517

Query: 1576 YTGKVGDARFPNPSHWGKLCFLSTPDGENCGLVKNMAATGLVSTNLVEPLLDKLLGCGME 1755
            YTGKVGDAR+P+PSHWGK+CFLSTPDGENCGLVKN+A TGLVST +++PL+DKL  CGME
Sbjct: 518  YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDPLVDKLFDCGME 577

Query: 1756 NLADDPSLTSLKGRDKVFLNGEWVGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGE 1935
             L DD S T L G++KVFL+G+WVG+C+  +SFV+ LR+KRR K++P +VEIKRD+QQGE
Sbjct: 578  KLVDDTS-TKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQGE 636

Query: 1936 VRIFSDAGRILRPLLVVENLKKINMFKGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIK 2115
            VRIFSDAGRILRPLLVVENLKK+  FKG  + FQS                 C TAWGIK
Sbjct: 637  VRIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIK 696

Query: 2116 YLLTGDKDQPSVDYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTT 2295
            YLL G  D P V YTHCELD+SFLLGLSCGIIP+ANHDHARRVLYQSEKHSQQAIGFSTT
Sbjct: 697  YLLKGH-DDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTT 755

Query: 2296 NPNIRVDTLSHQLYYPQRPLFRTMLSDNLGRPEYPRGHTSVLPKPEYFNGQNAIVAVNVH 2475
            NPNIRVDTLSHQLYYPQRPLFRTM+SD LG+P Y  GH  ++P+PEYFNGQ AIVAVNVH
Sbjct: 756  NPNIRVDTLSHQLYYPQRPLFRTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAIVAVNVH 815

Query: 2476 QGYNQEDSLVMNQASLERGMFRTEHVRNYKAEVDNKELFETKRLKTKDRVDFGKIQSKIG 2655
             GYNQEDSLVMN+ASLERGMFR+EH+R+YK+EVDN E  + KR K++D V FGK+QSKIG
Sbjct: 816  LGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKR-KSEDSVHFGKMQSKIG 874

Query: 2656 RVDSLDDDGFPFIGANLQSGDIVIGRRAESGADHSIKLKHTERGKVQKVVLSANDEGTNY 2835
            RVDSLDDDGFPFIGANLQ+GDIVIGR AESG DHSIKLKHTERG VQKVV+SAND+G N+
Sbjct: 875  RVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNF 934

Query: 2836 AVVSLRQVRLPCLGDKFSSMHGQKGVVGLLESQENFPFTREGIVPDIVINPHAFPTRQTP 3015
            AVVSLRQVR PCLGDKFSSMHGQKGV+G LESQENFPFT +GIVPDIVINPHAFP+RQTP
Sbjct: 935  AVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTP 994

Query: 3016 GQLLEAALGKGIACVGSMRYATPFSTPSVDVITDQLHRSGYSRWGSERLYNGHNGEMMRA 3195
            GQLLEAALGKGIAC G +R+ATPFST SVD I DQLHR+G+SRWG ER+YNG  GEM+R+
Sbjct: 995  GQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRS 1054

Query: 3196 LIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGA 3375
            LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEMERDCL+AHGA
Sbjct: 1055 LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGA 1114

Query: 3376 AANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGKIRGPYCRFCDSSENIVKVNVP 3555
            AANLHERLF LSD + MHIC +CKNI+NVIQR+V GG K+RGPYCR+C+SSE IVKVNVP
Sbjct: 1115 AANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVP 1174

Query: 3556 YGAKLLCQELFSMGICAKFDTEQC 3627
            YGAKLLCQELFSMGI  KF+T+ C
Sbjct: 1175 YGAKLLCQELFSMGISLKFETQLC 1198


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score = 1723 bits (4463), Expect = 0.0
 Identities = 842/1164 (72%), Positives = 970/1164 (83%), Gaps = 5/1164 (0%)
 Frame = +1

Query: 151  LSEELLTKFCRQASMEFFSEYGLISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKK 330
            L++E L  FC++ ++ FF+EYGLI HQI+S+N FI+NGIQ++FDS GEI VEPGYDPSK+
Sbjct: 77   LNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDPSKR 136

Query: 331  GQGEWRYAAVTFGKVTLEPPTFWSTEKPQKDSKEFLKLMPRHARLQNMTYSSRMKVEMSV 510
            G+G+WRYA+V FGKVTLE P  W+ E    D KE L  +PRHARLQNMTYSSRMK ++  
Sbjct: 137  GEGDWRYASVRFGKVTLERPRVWAGES---DGKESLNFLPRHARLQNMTYSSRMKAQVHF 193

Query: 511  QVYTQKLMKSDKFKTGKE-QFVQKHVESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDF 687
            QVYTQKL++SDK+KTGK+ ++V+K V  ED RD+LIGRIPVMV+S LCWMNG+++GDC++
Sbjct: 194  QVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCEY 253

Query: 688  DHGGYFLIKGAEKTFIAQEQICLKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESI 867
            DHGGYFLIKGAEKTFIAQEQICLKRLWVS  P W VAYR   KR+RVY+KL    +  + 
Sbjct: 254  DHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPKDENNR 313

Query: 868  QGLKILNVQFLSMSIPLWILFFYLGMSSDREIIEMIDVNLDDPILVNILIATIKYADENC 1047
             G K+L V F S  IP+WILFF LG SSD+E++++ID N+DD  + NIL+A+I  AD   
Sbjct: 314  GGEKVLTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHEADREA 373

Query: 1048 EG----FRKEGKPLKYIDDLMSQTKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKC 1215
            E     FR++G  + ++D L+   KFPPGE I++C+ KYLFP    +K KA FLGYMVKC
Sbjct: 374  EKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKC 433

Query: 1216 LLLSYTGRRKCENRDDFRNKXXXXXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRP 1395
            LL +YTGRRKC+NRDDFRNK              VHIRHAERRMVKAMQR+LYGDR+LRP
Sbjct: 434  LLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRP 493

Query: 1396 IEHYLDASIITNGLSRAFSTGAWSHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVA 1575
            IE+YLDASIITNGLSRAFSTG WSHPFKR ER +GVVATLRRTNPLQMTAD+RKTRQQV 
Sbjct: 494  IENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQ 553

Query: 1576 YTGKVGDARFPNPSHWGKLCFLSTPDGENCGLVKNMAATGLVSTNLVEPLLDKLLGCGME 1755
            YTGKVGDAR+P+PSHWGK+CFLSTPDGENCGLVKN+A TGLVST +++PL+DKL  CGME
Sbjct: 554  YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDPLVDKLFDCGME 613

Query: 1756 NLADDPSLTSLKGRDKVFLNGEWVGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGE 1935
             L DD S T L G++KVFL+G+WVG+C+  +SFV+ LR+KRR K++P +VEIKRD+QQGE
Sbjct: 614  KLVDDTS-TKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQGE 672

Query: 1936 VRIFSDAGRILRPLLVVENLKKINMFKGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIK 2115
            VRIFSDAGRILRPLLVVENLKK+  FKG  + FQS                 C TAWGIK
Sbjct: 673  VRIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIK 732

Query: 2116 YLLTGDKDQPSVDYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTT 2295
            YLL G  D P V YTHCELD+SFLLGLSCGIIP+ANHDHARRVLYQSEKHSQQAIGFSTT
Sbjct: 733  YLLKGH-DDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTT 791

Query: 2296 NPNIRVDTLSHQLYYPQRPLFRTMLSDNLGRPEYPRGHTSVLPKPEYFNGQNAIVAVNVH 2475
            NPNIRVDTLSHQLYYPQRPLFRTM+SD              LP+PEYFNGQ AIVAVNVH
Sbjct: 792  NPNIRVDTLSHQLYYPQRPLFRTMISD--------------LPRPEYFNGQIAIVAVNVH 837

Query: 2476 QGYNQEDSLVMNQASLERGMFRTEHVRNYKAEVDNKELFETKRLKTKDRVDFGKIQSKIG 2655
             GYNQEDSLVMN+ASLERGMFR+EH+R+YK+EVDN E  + KR K++D V FGK+QSKIG
Sbjct: 838  LGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKR-KSEDSVHFGKMQSKIG 896

Query: 2656 RVDSLDDDGFPFIGANLQSGDIVIGRRAESGADHSIKLKHTERGKVQKVVLSANDEGTNY 2835
            RVDSLDDDGFPFIGANLQ+GDIVIGR AESG DHSIKLKHTERG VQKVV+SAND+G N+
Sbjct: 897  RVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNF 956

Query: 2836 AVVSLRQVRLPCLGDKFSSMHGQKGVVGLLESQENFPFTREGIVPDIVINPHAFPTRQTP 3015
            AVVSLRQVR PCLGDKFSSMHGQKGV+G LESQENFPFT +GIVPDIVINPHAFP+RQTP
Sbjct: 957  AVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTP 1016

Query: 3016 GQLLEAALGKGIACVGSMRYATPFSTPSVDVITDQLHRSGYSRWGSERLYNGHNGEMMRA 3195
            GQLLEAALGKGIAC G +R+ATPFST SVD I DQLHR+G+SRWG ER+YNG  GEM+R+
Sbjct: 1017 GQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRS 1076

Query: 3196 LIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGA 3375
            LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEMERDCL+AHGA
Sbjct: 1077 LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGA 1136

Query: 3376 AANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGKIRGPYCRFCDSSENIVKVNVP 3555
            AANLHERLF LSD + MHIC +CKNI+NVIQR+V GG K+RGPYCR+C+SSE IVKVNVP
Sbjct: 1137 AANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVP 1196

Query: 3556 YGAKLLCQELFSMGICAKFDTEQC 3627
            YGAKLLCQELFSMGI  KF+T+ C
Sbjct: 1197 YGAKLLCQELFSMGISLKFETQLC 1220


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score = 1699 bits (4401), Expect = 0.0
 Identities = 833/1161 (71%), Positives = 957/1161 (82%), Gaps = 2/1161 (0%)
 Frame = +1

Query: 151  LSEELLTKFCRQASMEFFSEYGLISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKK 330
            L E  L  FC++AS  FF +YGLISHQI+SYN FI  GIQ++FDS+GEI VEPGYDPSK+
Sbjct: 61   LGETYLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKR 120

Query: 331  GQGEWRYAAVTFGKVTLEPPTFWSTEKPQKDS-KEFLKLMPRHARLQNMTYSSRMKVEMS 507
            G G+W++A+V FGKVTLE P FW+ EK   D  KE+L L+PRHARLQNMTYS+R+ VE  
Sbjct: 121  GDGDWKHASVKFGKVTLERPKFWAGEKFSADGGKEYLDLLPRHARLQNMTYSARIMVETH 180

Query: 508  VQVYTQKLMKSDKFKTGKEQFVQKHVESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDF 687
            VQVYT+KL++SDKFKTG +QFV K  E EDKRDVLIGRIPVMV S LCWMNG+ K DC+F
Sbjct: 181  VQVYTKKLVRSDKFKTGVDQFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEF 240

Query: 688  DHGGYFLIKGAEKTFIAQEQICLKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESI 867
            DHGGYF++KGAEKTFIAQEQ+CLKRLWVS  P W V YR   KR+RVY+KL +    E I
Sbjct: 241  DHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHI 300

Query: 868  QG-LKILNVQFLSMSIPLWILFFYLGMSSDREIIEMIDVNLDDPILVNILIATIKYADEN 1044
            +G  K L+V  L+  +P+W+LFF LG+SSDRE++ +IDV+++D  +VNIL+A+I  AD+N
Sbjct: 301  KGGEKALSVYILA-EMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKN 359

Query: 1045 CEGFRKEGKPLKYIDDLMSQTKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKCLLL 1224
            CE FRK  K L Y+D L+   KFPP E +++C++ YLFP L   K KA FLGYMVKCLL 
Sbjct: 360  CEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLH 419

Query: 1225 SYTGRRKCENRDDFRNKXXXXXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRPIEH 1404
            S+ GRRK +NRDDFRNK               HI+HAERRMVKAMQRDLYGDR ++PIEH
Sbjct: 420  SFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEH 479

Query: 1405 YLDASIITNGLSRAFSTGAWSHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVAYTG 1584
            YLDASIITNGLSRAFSTG W HP+KR ER +GVVATLRRTNPLQMTAD+RK+RQQV YTG
Sbjct: 480  YLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTG 539

Query: 1585 KVGDARFPNPSHWGKLCFLSTPDGENCGLVKNMAATGLVSTNLVEPLLDKLLGCGMENLA 1764
            KVGDAR+P+PSHWGKLCFLSTPDGENCGLVKN+A+ GLVST +++P L+ L  CGM+ L 
Sbjct: 540  KVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCGMQKLV 599

Query: 1765 DDPSLTSLKGRDKVFLNGEWVGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGEVRI 1944
            DD   TSL G+ KV L+GEWVG+C+ S  FV  LR KRR  ++P +VE+KRD+ QGEVRI
Sbjct: 600  DD-CATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRI 658

Query: 1945 FSDAGRILRPLLVVENLKKINMFKGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIKYLL 2124
            FSD+GRILRPLLVV NLKKI   KGG Y FQS                 C+TAWG++Y+L
Sbjct: 659  FSDSGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIEFIGPEEEEDCRTAWGVEYIL 718

Query: 2125 TGDKDQPSVDYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPN 2304
              DK+ P   YTHCELD+SFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFST NPN
Sbjct: 719  KADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPN 778

Query: 2305 IRVDTLSHQLYYPQRPLFRTMLSDNLGRPEYPRGHTSVLPKPEYFNGQNAIVAVNVHQGY 2484
             RVDT +HQLYYPQRPLFRTML+D+LG+P+  +    +LP+PEYFNGQ AIVAVNVH GY
Sbjct: 779  NRVDTNTHQLYYPQRPLFRTMLADSLGKPKCTQYQKGMLPRPEYFNGQCAIVAVNVHLGY 838

Query: 2485 NQEDSLVMNQASLERGMFRTEHVRNYKAEVDNKELFETKRLKTKDRVDFGKIQSKIGRVD 2664
            NQEDSLVMN+ASLERGMFR+EHVR+YKAEVDNKE    K+LK +D V+FGK QSKIGRVD
Sbjct: 839  NQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAM-AKKLKIEDSVNFGKTQSKIGRVD 897

Query: 2665 SLDDDGFPFIGANLQSGDIVIGRRAESGADHSIKLKHTERGKVQKVVLSANDEGTNYAVV 2844
            SLDDDGFPFIGANLQSGDI+IG+ AESGADHS+KLKHTERG VQKV+LSANDEG N+AVV
Sbjct: 898  SLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVV 957

Query: 2845 SLRQVRLPCLGDKFSSMHGQKGVVGLLESQENFPFTREGIVPDIVINPHAFPTRQTPGQL 3024
            SLRQVR PCLGDKFSSMHGQKGV+G LESQENFPFT +GIVPDIVINPHAFP+RQTPGQL
Sbjct: 958  SLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQL 1017

Query: 3025 LEAALGKGIACVGSMRYATPFSTPSVDVITDQLHRSGYSRWGSERLYNGHNGEMMRALIF 3204
            LEAALGKGIA  G  +YATPFST SVD I +QL   G++RWG+ER+YNG  GEM+ +LIF
Sbjct: 1018 LEAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIF 1077

Query: 3205 IGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGAAAN 3384
            +GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL+AHGAAAN
Sbjct: 1078 MGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN 1137

Query: 3385 LHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGKIRGPYCRFCDSSENIVKVNVPYGA 3564
            LHERLF LSD SQMHICGKCKN+ NVIQR V  GGK+RGP+CRFC+S E+IVKVNVPYGA
Sbjct: 1138 LHERLFTLSDSSQMHICGKCKNMANVIQRTVQ-GGKVRGPFCRFCESVEDIVKVNVPYGA 1196

Query: 3565 KLLCQELFSMGICAKFDTEQC 3627
            KLLCQELFSMGI  KFDTE C
Sbjct: 1197 KLLCQELFSMGISLKFDTEIC 1217


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
            lycopersicum]
          Length = 1217

 Score = 1697 bits (4394), Expect = 0.0
 Identities = 832/1161 (71%), Positives = 957/1161 (82%), Gaps = 2/1161 (0%)
 Frame = +1

Query: 151  LSEELLTKFCRQASMEFFSEYGLISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKK 330
            L E  L  FC++AS  FF +YGLISHQI+SYN FI  GIQ++FDS+GEI VEPGYDPSK+
Sbjct: 61   LGESFLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKR 120

Query: 331  GQGEWRYAAVTFGKVTLEPPTFWSTEKPQKDS-KEFLKLMPRHARLQNMTYSSRMKVEMS 507
            G G+W++A+V FGKVTLE P FW+ EK   D  KE+L L+PRHARLQNMTYS+R+ VE  
Sbjct: 121  GDGDWKHASVKFGKVTLERPKFWAGEKFSVDGGKEYLDLLPRHARLQNMTYSARIMVETH 180

Query: 508  VQVYTQKLMKSDKFKTGKEQFVQKHVESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDF 687
            VQVYT+KL++SDKFKTG ++FV K  E EDKRDVLIGRIPVMV S LCWMNG+ K DC+F
Sbjct: 181  VQVYTKKLVRSDKFKTGVDRFVDKEWEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEF 240

Query: 688  DHGGYFLIKGAEKTFIAQEQICLKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESI 867
            DHGGYF++KGAEKTFIAQEQ+CLKRLWVS  P W V YR   KR+RVY+KL +    E I
Sbjct: 241  DHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHI 300

Query: 868  QG-LKILNVQFLSMSIPLWILFFYLGMSSDREIIEMIDVNLDDPILVNILIATIKYADEN 1044
            +G  K L+V  L+  +P+W+LFF LG+SSDRE++ +IDV+++D  +VNIL+A+I  AD+N
Sbjct: 301  KGGEKALSVYILA-EMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKN 359

Query: 1045 CEGFRKEGKPLKYIDDLMSQTKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKCLLL 1224
            CE FRK  K L Y+D L+   KFPP E +++C++ YLFP L   K KA FLGYMVKCLL 
Sbjct: 360  CEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLH 419

Query: 1225 SYTGRRKCENRDDFRNKXXXXXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRPIEH 1404
            S+ GRRK +NRDDFRNK               HI+HAERRMVKAMQRDLYGDR ++PIEH
Sbjct: 420  SFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEH 479

Query: 1405 YLDASIITNGLSRAFSTGAWSHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVAYTG 1584
            YLDASIITNGLSRAFSTG W HP+KR ER +GVVATLRRTNPLQMTAD+RK+RQQV YTG
Sbjct: 480  YLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTG 539

Query: 1585 KVGDARFPNPSHWGKLCFLSTPDGENCGLVKNMAATGLVSTNLVEPLLDKLLGCGMENLA 1764
            KVGDAR+P+PSHWGKLCFLSTPDGENCGLVKN+A+ GLVST +++P L+ L  CGM+ L 
Sbjct: 540  KVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCGMQKLV 599

Query: 1765 DDPSLTSLKGRDKVFLNGEWVGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGEVRI 1944
            DD S TSL G+ KV L+GEWVG+C+ S  FV  LR KRR  ++P +VE+KRD+ QGEVRI
Sbjct: 600  DDCS-TSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRI 658

Query: 1945 FSDAGRILRPLLVVENLKKINMFKGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIKYLL 2124
            FSD GRILRPLLVV NLKKI   KGG Y FQS                 C+TAWG++Y+L
Sbjct: 659  FSDPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYIL 718

Query: 2125 TGDKDQPSVDYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPN 2304
              DK+ P   YTHCELD+SFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFST NPN
Sbjct: 719  KADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPN 778

Query: 2305 IRVDTLSHQLYYPQRPLFRTMLSDNLGRPEYPRGHTSVLPKPEYFNGQNAIVAVNVHQGY 2484
             RVDT +HQLYYPQRPLFRTML+D+LG+P+  +    +LP+PEYFNGQ AIVAVNVH GY
Sbjct: 779  NRVDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGY 838

Query: 2485 NQEDSLVMNQASLERGMFRTEHVRNYKAEVDNKELFETKRLKTKDRVDFGKIQSKIGRVD 2664
            NQEDSLVMN+ASLERGMFR+EHVR+YKAEVDNKE    K+LK +D V+FGK QSKIGRVD
Sbjct: 839  NQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAM-AKKLKIEDSVNFGKTQSKIGRVD 897

Query: 2665 SLDDDGFPFIGANLQSGDIVIGRRAESGADHSIKLKHTERGKVQKVVLSANDEGTNYAVV 2844
            SLDDDGFPFIGANLQSGDI+IG+ +ESGADHS+KLKHTERG VQKV+LSANDEG N+AVV
Sbjct: 898  SLDDDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVV 957

Query: 2845 SLRQVRLPCLGDKFSSMHGQKGVVGLLESQENFPFTREGIVPDIVINPHAFPTRQTPGQL 3024
            SLRQVR PCLGDKFSSMHGQKGV+G LESQENFPFT +GIVPDIVINPHAFP+RQTPGQL
Sbjct: 958  SLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQL 1017

Query: 3025 LEAALGKGIACVGSMRYATPFSTPSVDVITDQLHRSGYSRWGSERLYNGHNGEMMRALIF 3204
            LEAALGKGIA  G  +YATPFST SVD I +QL   G++RWG+ER+YNG  GEM+ +LIF
Sbjct: 1018 LEAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHSLIF 1077

Query: 3205 IGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGAAAN 3384
            +GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL+AHGAAAN
Sbjct: 1078 MGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAAN 1137

Query: 3385 LHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGKIRGPYCRFCDSSENIVKVNVPYGA 3564
            LHERLF LSD SQMHICGKCKN+ NVIQR V  GGK+RGP+CRFC+S E+IVKVNVPYGA
Sbjct: 1138 LHERLFTLSDSSQMHICGKCKNMANVIQRTVQ-GGKVRGPFCRFCESVEDIVKVNVPYGA 1196

Query: 3565 KLLCQELFSMGICAKFDTEQC 3627
            KLLCQELFSMGI  KFDTE C
Sbjct: 1197 KLLCQELFSMGISLKFDTEIC 1217


>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
            gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Citrus sinensis]
            gi|557545145|gb|ESR56123.1| hypothetical protein
            CICLE_v10018562mg [Citrus clementina]
          Length = 1198

 Score = 1690 bits (4377), Expect = 0.0
 Identities = 820/1166 (70%), Positives = 959/1166 (82%), Gaps = 7/1166 (0%)
 Frame = +1

Query: 151  LSEELLTKFCRQASMEFFSEYGLISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKK 330
            L EE L  FCR+A++ FF+EYGL+SHQI+SYN FI+NG+QK FDS GE  VEPGYDPSKK
Sbjct: 42   LGEEFLKTFCRKAAVSFFNEYGLVSHQINSYNEFIKNGLQKAFDSFGETIVEPGYDPSKK 101

Query: 331  GQGEWRYAAVTFGKVTLEPPTFWSTEKPQKDSKEFLKLMPRHARLQNMTYSSRMKVEMSV 510
            G+GEWRYA++ FG+VTL+ P+F++     +       + PRHARLQNMTYSSRMKV++  
Sbjct: 102  GEGEWRYASMRFGQVTLDKPSFFAGNGGDEHD-----MFPRHARLQNMTYSSRMKVKVQF 156

Query: 511  QVYTQKLMKSDKFKTGKEQFVQKHVESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDFD 690
            QVYTQK + SDKFKTG+EQ++QK V S++  D++IGRIPVMV+S+LCWM G++KGDCDFD
Sbjct: 157  QVYTQKRVTSDKFKTGREQYIQKEVLSDEATDIIIGRIPVMVKSDLCWMKGVEKGDCDFD 216

Query: 691  HGGYFLIKGAEKTFIAQEQICLKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESIQ 870
            HGGYF+IKGAEK F+AQEQICLKRLWVS    W+VAY+SE KR R+ ++L+D+   E I+
Sbjct: 217  HGGYFIIKGAEKVFVAQEQICLKRLWVSNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIK 276

Query: 871  G-LKILNVQFLSMSIPLWILFFYLGMSSDREIIEMIDVNLDDPILVNILIATIKYADENC 1047
            G  K+L+V FLS  IP+WILFF LG+SSD+EI+ +ID   +D  ++NIL A+I  AD  C
Sbjct: 277  GGEKVLSVYFLSTEIPIWILFFALGVSSDKEIVNLIDFTCEDCSILNILFASIHDADNKC 336

Query: 1048 EGFRKEGKPLKYIDDLMSQTKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKCLLLS 1227
            + FRK    LKY+D L+  T FPPGE  ++CM+ YLFP+LH  K KA FLGYMVKCLL +
Sbjct: 337  DEFRKGRNALKYVDKLIKGTTFPPGESTEECMNTYLFPSLHGTKQKARFLGYMVKCLLQA 396

Query: 1228 YTGRRKCENRDDFRNKXXXXXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRPIEHY 1407
            Y+GRRKC+NRDDFRNK              VHI HA +RM KA+QRDLYGDR +RPIE+Y
Sbjct: 397  YSGRRKCDNRDDFRNKRLELAGELLERELKVHIAHARKRMAKALQRDLYGDRTVRPIEYY 456

Query: 1408 LDASIITNGLSRAFSTGAWSHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVAYTGK 1587
            LDASI+TNGLSRAFSTGAWSHPFKRTER +G+VA L R NPLQ   DLR+TRQQV YTGK
Sbjct: 457  LDASILTNGLSRAFSTGAWSHPFKRTERISGIVANLGRANPLQTLVDLRRTRQQVQYTGK 516

Query: 1588 VGDARFPNPSHWGKLCFLSTPDGENCGLVKNMAATGLVSTNLVEPLLDKLLGCGMENLAD 1767
            VGDAR+P+PSHWGK+CFLSTPDGENCGLVKN+  TGLVST+++EP+ ++L   GME LAD
Sbjct: 517  VGDARYPHPSHWGKICFLSTPDGENCGLVKNLGVTGLVSTSILEPIFEQLFNSGMEKLAD 576

Query: 1768 DPSLTSLKGRDKVFLNGEWVGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGEVRIF 1947
            D S  SL G+ KVF++G+W+G+CK SLSFV  LR KRR K++P +VEIKRD+ Q EVRIF
Sbjct: 577  DASY-SLGGKFKVFVDGDWIGVCKDSLSFVSELRRKRRRKELPTQVEIKRDELQSEVRIF 635

Query: 1948 SDAGRILRPLLVVENLKKINMFKGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIKYLLT 2127
             DAGRILRPLLVVEN+ KI   +G  Y FQ+                 C TAWGIKYLL 
Sbjct: 636  MDAGRILRPLLVVENMGKIKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWGIKYLLK 695

Query: 2128 GDKDQPSVDYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNI 2307
              +D+  + +THCELD+SFLLGLSCGIIPFANHDHARRVLYQS+KHS QAIGF TTNP+I
Sbjct: 696  DIEDKKPIKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSI 755

Query: 2308 RVDTLSHQLYYPQRPLFRTMLSDNLGRPEYPRGHTSVLPKPEYFNGQNAIVAVNVHQGYN 2487
            RVDTLSHQL+YPQRPLFRTM+SD LG+P Y  GH  +LP+PE +NGQNAIVAVNVH GYN
Sbjct: 756  RVDTLSHQLFYPQRPLFRTMISDCLGKPGY--GHNHILPRPELYNGQNAIVAVNVHLGYN 813

Query: 2488 QEDSLVMNQASLERGMFRTEHVRNYKAEVDNKELFETKRLKTKDRVDFGKIQSKIGRVDS 2667
            QEDSLVMN+ASLERGMFR+EH+R+YKAEVDNKE+ + KR  + D V+FGKIQSKIGRVDS
Sbjct: 814  QEDSLVMNRASLERGMFRSEHIRSYKAEVDNKEM-QVKRRSSDDMVNFGKIQSKIGRVDS 872

Query: 2668 LDDDGFPFIGANLQSGDIVIGRRAESGADHSIKLKHTERGKVQKVVLSANDEGTNYAVVS 2847
            LDDDGFPFIGANLQ GDIVIG+ A+SGADHSIKLKHTERG VQKVVLS+ND+G N++VVS
Sbjct: 873  LDDDGFPFIGANLQCGDIVIGKYADSGADHSIKLKHTERGMVQKVVLSSNDDGKNFSVVS 932

Query: 2848 LRQVRLPCLGDKFSSMHGQKGVVGLLESQENFPFTREGIVPDIVINPHAFPTRQTPGQLL 3027
            LRQVR PCLGDKFSSMHGQKGV+G LESQENFPFT +GIVPDIVINPHAFP+RQTPGQLL
Sbjct: 933  LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLL 992

Query: 3028 EAALGKGIA------CVGSMRYATPFSTPSVDVITDQLHRSGYSRWGSERLYNGHNGEMM 3189
            EAALGKGIA      C G  RYATPF+TPSVD IT+QLHR+G+S+WG+ERLY+G  GEM+
Sbjct: 993  EAALGKGIAALGKGICSGLKRYATPFATPSVDAITEQLHRAGFSKWGTERLYDGRTGEMV 1052

Query: 3190 RALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAH 3369
            R+LIFIGPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL+AH
Sbjct: 1053 RSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAH 1112

Query: 3370 GAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGKIRGPYCRFCDSSENIVKVN 3549
            GAAANLHERLF LSD  QMHIC KCKN+ NVIQR V GG K+RGPYCR CDS ++IVK N
Sbjct: 1113 GAAANLHERLFTLSDSYQMHICRKCKNVANVIQRVVGGGRKVRGPYCRICDSGDDIVKAN 1172

Query: 3550 VPYGAKLLCQELFSMGICAKFDTEQC 3627
            VPYGAKLLCQELFSMGI  KFDTE C
Sbjct: 1173 VPYGAKLLCQELFSMGITLKFDTEFC 1198


>ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1184

 Score = 1683 bits (4358), Expect = 0.0
 Identities = 821/1189 (69%), Positives = 959/1189 (80%), Gaps = 10/1189 (0%)
 Frame = +1

Query: 91   SSTSKDVNKASTST-ANDDTC--------LSEELLTKFCRQASMEFFSEYGLISHQISSY 243
            +S     N+A      +DD C        L EE L  FC+QA++ FF EYGLISHQ++SY
Sbjct: 3    ASADAKANRADIDLDVDDDVCDEVLSVQQLGEEFLRGFCKQAAVSFFKEYGLISHQLNSY 62

Query: 244  NSFIENGIQKLFDSLGEITVEPGYDPSKKGQGEWRYAAVTFGKVTLEPPTFWSTEKPQKD 423
            N+FI+ G+Q  FDS GE  +  GYDPSKKG+G+WR+A V FGKVT+E PTFW+     + 
Sbjct: 63   NAFIKYGLQNTFDSFGEFLIHSGYDPSKKGEGDWRHARVRFGKVTVERPTFWAVSGGNE- 121

Query: 424  SKEFLKLMPRHARLQNMTYSSRMKVEMSVQVYTQKLMKSDKFKTGKEQFVQKHVESEDKR 603
                L ++PRHARLQNMTYSSRMKV + +QVYT K +KSDKFKTG+E+FV++ V  +D R
Sbjct: 122  ----LNMLPRHARLQNMTYSSRMKVNVDLQVYTAKSVKSDKFKTGREEFVEEEVVYQDNR 177

Query: 604  DVLIGRIPVMVRSNLCWMNGLKKGDCDFDHGGYFLIKGAEKTFIAQEQICLKRLWVSEKP 783
            D++IGRIPVMVRS+LCWMN ++K DCDFDHGGYFLIKG EK FIAQEQI +KRLW+S   
Sbjct: 178  DIIIGRIPVMVRSDLCWMNEVEKADCDFDHGGYFLIKGTEKIFIAQEQISMKRLWISNSQ 237

Query: 784  NWSVAYRSELKRRRVYLKLIDLPNNESIQG-LKILNVQFLSMSIPLWILFFYLGMSSDRE 960
             W++AYRSE+KR R+ ++L++    E I+G  K+L V FLS  IP+W+LFF LG+SSD+E
Sbjct: 238  GWTIAYRSEVKRNRLIIRLVENSKVEYIKGGEKVLTVYFLSTEIPVWVLFFALGVSSDKE 297

Query: 961  IIEMIDVNLDDPILVNILIATIKYADENCEGFRKEGKPLKYIDDLMSQTKFPPGEPIKDC 1140
            ++ +ID   +D  + NIL A+I+ AD  C  F +    + Y+  L+  T+FPP E I++C
Sbjct: 298  VVNLIDYESNDSSITNILFASIRNADGKCYKFCQGRNAIDYVGKLVKDTRFPPEEGIEEC 357

Query: 1141 MDKYLFPTLHDLKLKALFLGYMVKCLLLSYTGRRKCENRDDFRNKXXXXXXXXXXXXXXV 1320
            +  YLFPTL   K KA FLGYMVKCLL +YTGR KC+NRDDFRNK              V
Sbjct: 358  LSTYLFPTLRSFKQKARFLGYMVKCLLQAYTGRLKCDNRDDFRNKRLELAGELLERELKV 417

Query: 1321 HIRHAERRMVKAMQRDLYGDRNLRPIEHYLDASIITNGLSRAFSTGAWSHPFKRTERTAG 1500
            HI HA RRM K +QRDLY DR +RPIEHYLDASI+TNGLSRAFSTGAWSHP+KR ER +G
Sbjct: 418  HIAHARRRMAKTLQRDLYADRTVRPIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERISG 477

Query: 1501 VVATLRRTNPLQMTADLRKTRQQVAYTGKVGDARFPNPSHWGKLCFLSTPDGENCGLVKN 1680
            VVA L R NPLQ   DLRKTRQQV YTGKVGDAR+P+PSHWGK+CFLSTPDGENCGLVKN
Sbjct: 478  VVANLGRANPLQTMVDLRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKN 537

Query: 1681 MAATGLVSTNLVEPLLDKLLGCGMENLADDPSLTSLKGRDKVFLNGEWVGICKGSLSFVM 1860
            +A TGLVSTN++E ++DKL   GME L +D + +SL G+DKVFLNGEWVG+C+ SLSF  
Sbjct: 538  LATTGLVSTNIMESIVDKLFDSGMEELVND-TCSSLDGKDKVFLNGEWVGVCEDSLSFAA 596

Query: 1861 NLRSKRRSKQIPPEVEIKRDQQQGEVRIFSDAGRILRPLLVVENLKKINMFKGGGYMFQS 2040
             +R KRRSK+ P +VEIKRD+ +GEVRIFSD GRILRPLLVV+NL +I  FKG  Y FQ+
Sbjct: 597  EVRRKRRSKEFPHQVEIKRDEHKGEVRIFSDGGRILRPLLVVDNLNRIKAFKGENYTFQA 656

Query: 2041 XXXXXXXXXXXXXXXXXCKTAWGIKYLLTGDKDQPSVDYTHCELDLSFLLGLSCGIIPFA 2220
                             C+TAW IKYLLT  + +  V YTHCELD+SFLLGLSCGIIPFA
Sbjct: 657  LLEGGIIELVGTEEEEDCRTAWSIKYLLTDVEGKQPVKYTHCELDMSFLLGLSCGIIPFA 716

Query: 2221 NHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMLSDNLGRPEYP 2400
            NHDHARRVLYQ++KHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTM SD LG+  +P
Sbjct: 717  NHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMTSDCLGKLGHP 776

Query: 2401 RGHTSVLPKPEYFNGQNAIVAVNVHQGYNQEDSLVMNQASLERGMFRTEHVRNYKAEVDN 2580
             G   VLPKPE +NGQNAIVAVNVH GYNQEDSLVMN++SLERGMFR+EHVR+YKAEVDN
Sbjct: 777  LGQKGVLPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRSSLERGMFRSEHVRSYKAEVDN 836

Query: 2581 KELFETKRLKTKDRVDFGKIQSKIGRVDSLDDDGFPFIGANLQSGDIVIGRRAESGADHS 2760
            KE+ + KR K++D V+FGKIQSKIGRVDSLDDDGFP++GANLQ GDIVIGR AESGADHS
Sbjct: 837  KEI-QDKRRKSEDIVNFGKIQSKIGRVDSLDDDGFPYVGANLQCGDIVIGRCAESGADHS 895

Query: 2761 IKLKHTERGKVQKVVLSANDEGTNYAVVSLRQVRLPCLGDKFSSMHGQKGVVGLLESQEN 2940
            IKLKHTERG VQKVVLS+ND+G NYAVVSLRQVR PCLGDKFSSMHGQKGV+G LESQEN
Sbjct: 896  IKLKHTERGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQEN 955

Query: 2941 FPFTREGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACVGSMRYATPFSTPSVDVITDQ 3120
            FPFT +GIVPDIVINPHAFP+RQTPGQLLEAALGKGIAC GSM+YATPFST SVD IT+Q
Sbjct: 956  FPFTTQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSMKYATPFSTISVDAITEQ 1015

Query: 3121 LHRSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQP 3300
            LHR+G+SRWG+ER+YNG  GEM+R+LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQP
Sbjct: 1016 LHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQP 1075

Query: 3301 VADRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVP 3480
            VADRKR+GGIKFGEMERDCL+AHGA+ANLHERL  LSD SQMH+C  CKN+ NVI+RAVP
Sbjct: 1076 VADRKRYGGIKFGEMERDCLIAHGASANLHERLVTLSDSSQMHVCRNCKNVANVIERAVP 1135

Query: 3481 GGGKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGICAKFDTEQC 3627
            GG KIRGPYCR C S ++IV+VNVPYGAKLLCQELFSMGI  KF+T+ C
Sbjct: 1136 GGRKIRGPYCRGCQSVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1184


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score = 1681 bits (4353), Expect = 0.0
 Identities = 834/1202 (69%), Positives = 964/1202 (80%), Gaps = 9/1202 (0%)
 Frame = +1

Query: 49   DDNAVTDTAEALNPSSTSKDVNKASTSTANDD--------TCLSEELLTKFCRQASMEFF 204
            +D   +   E L  +ST  D++  S S ++ D        T + E  L  FC +A+  FF
Sbjct: 12   NDIGTSSKTEKLFKASTDMDIDFDSDSGSDCDFMDSSTSLTDIGEAKLKDFCNKAATLFF 71

Query: 205  SEYGLISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKKGQGEWRYAAVTFGKVTLE 384
            +EYGLISHQI+SYN FI NGIQK FDS GE+ VEPGYDPSKKG+ EWRYA+V FGKV LE
Sbjct: 72   NEYGLISHQINSYNDFINNGIQKAFDSFGELVVEPGYDPSKKGENEWRYASVKFGKVALE 131

Query: 385  PPTFWSTEKPQKDSKEFLKLMPRHARLQNMTYSSRMKVEMSVQVYTQKLMKSDKFKTGKE 564
             PTFWS     K       ++PRHARLQNMTYSS+MKV +SV+VYT+K+++SDKFKTGK+
Sbjct: 132  KPTFWSGADEHK-------MLPRHARLQNMTYSSKMKVNVSVEVYTRKVVRSDKFKTGKD 184

Query: 565  QFVQKHVESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDFDHGGYFLIKGAEKTFIAQE 744
            Q+V K V + D R++ IG +PVMV+S+LCWM   +KGDCDFDHGGYFLIKGAEK FIAQE
Sbjct: 185  QYVDKEVLNTDNRNITIGSLPVMVKSDLCWMKTAEKGDCDFDHGGYFLIKGAEKVFIAQE 244

Query: 745  QICLKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESIQG-LKILNVQFLSMSIPLW 921
            QICLKRLW+S    W+V+Y+SE+KR R+ ++L+ L   E ++   K L V FLS  IPLW
Sbjct: 245  QICLKRLWISNIQGWTVSYKSEIKRNRLIVRLVGLSALEDVKAEKKCLTVYFLSTEIPLW 304

Query: 922  ILFFYLGMSSDREIIEMIDVNLDDPILVNILIATIKYADENCEGFRKEGKPLKYIDDLMS 1101
            ILFF LG++SD+E+I++I    +D  +VNI  A+I  ADE  EGFR+  + L+Y+   + 
Sbjct: 305  ILFFALGVTSDKEVIDLIGYGSNDARIVNIFFASIHDADEKTEGFRRGKEALEYVVRQIR 364

Query: 1102 QTKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKCLLLSYTGRRKCENRDDFRNKXX 1281
             T+FPPGE  +D    YLFPTLH L+ KA FLGYMVKCLL +Y G+RKC N D FRNK  
Sbjct: 365  GTRFPPGEN-EDFFLLYLFPTLHSLRQKARFLGYMVKCLLQAYNGQRKCNNWDSFRNKRF 423

Query: 1282 XXXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRPIEHYLDASIITNGLSRAFSTGA 1461
                        VHI HA RRM KA+Q+DLYGDR++RPIEHYLDASI+TNGLSRAFSTGA
Sbjct: 424  ELAKELLERELKVHIAHARRRMAKALQKDLYGDRDVRPIEHYLDASIVTNGLSRAFSTGA 483

Query: 1462 WSHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVAYTGKVGDARFPNPSHWGKLCFL 1641
            WSHP+KR ER +GVVA L R NPLQ   DLRKTR  V YTGKVGDARFP+PSHWG++CFL
Sbjct: 484  WSHPYKRMERISGVVANLGRANPLQTMVDLRKTRYHVQYTGKVGDARFPHPSHWGRVCFL 543

Query: 1642 STPDGENCGLVKNMAATGLVSTNLVEPLLDKLLGCGMENLADDPSLTSLKGRDKVFLNGE 1821
            STPDGENCGLVKN+A TGLVS N++EPL+DKL+  GME + +D S + L  +DKVFLNGE
Sbjct: 544  STPDGENCGLVKNLATTGLVSVNILEPLIDKLIARGMEKVPED-SHSDLDEKDKVFLNGE 602

Query: 1822 WVGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGEVRIFSDAGRILRPLLVVENLKK 2001
            WVG+C+ S  FV  LR  RR K++P +VEIKRD+QQ EVRIFSDAGRILRPLLVV+NL K
Sbjct: 603  WVGVCEDSRLFVAELRRLRRRKKLPQQVEIKRDEQQQEVRIFSDAGRILRPLLVVQNLHK 662

Query: 2002 INMFKGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIKYLLTGDKDQPSVDYTHCELDLS 2181
            I  FKGG   FQS                 C TAWGIK+LL+G   + S+ YTHCELD+S
Sbjct: 663  IEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKFLLSGVDGKQSLKYTHCELDMS 722

Query: 2182 FLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFR 2361
            FLLGLSCGIIPFANHDHARRVLYQ++KHSQQAIGF TTNPNIRVDTLSHQLYYPQRPLFR
Sbjct: 723  FLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVDTLSHQLYYPQRPLFR 782

Query: 2362 TMLSDNLGRPEYPRGHTSVLPKPEYFNGQNAIVAVNVHQGYNQEDSLVMNQASLERGMFR 2541
            T+ SD LG+P   RGH  ++PKPE +NGQNAIVAVNVH GYNQEDSLVMN+ASLERGMFR
Sbjct: 783  TVTSDCLGKPGDTRGHNGIVPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFR 842

Query: 2542 TEHVRNYKAEVDNKELFETKRLKTKDRVDFGKIQSKIGRVDSLDDDGFPFIGANLQSGDI 2721
            +EH+R+YKA+VDNKEL + KR K  D V+FGKI SKIGRVDSLDDDGFPFIGANLQSGDI
Sbjct: 843  SEHIRSYKADVDNKELLD-KRRKYDDNVNFGKIPSKIGRVDSLDDDGFPFIGANLQSGDI 901

Query: 2722 VIGRRAESGADHSIKLKHTERGKVQKVVLSANDEGTNYAVVSLRQVRLPCLGDKFSSMHG 2901
            VIGR AESG DHSIKLKHTERG VQKVVLS+NDEG N+AVVSLRQVR PCLGDKFSSMHG
Sbjct: 902  VIGRCAESGPDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHG 961

Query: 2902 QKGVVGLLESQENFPFTREGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACVGSMRYAT 3081
            QKGV+G LESQENFPFTR+GIVPDIVINPH+FP+RQTPGQLLEAALGKGIAC GSM+YAT
Sbjct: 962  QKGVLGFLESQENFPFTRQGIVPDIVINPHSFPSRQTPGQLLEAALGKGIACGGSMKYAT 1021

Query: 3082 PFSTPSVDVITDQLHRSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKF 3261
            PFST SV+ IT+QLHR+G+SRWG+ER+YNG  GEM+R+LIF+GPTFYQRLIHMAEDKVKF
Sbjct: 1022 PFSTLSVEAITNQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKF 1081

Query: 3262 RNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGK 3441
            RNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL+AHGA+ANLHERLF LSD SQMHIC K
Sbjct: 1082 RNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQK 1141

Query: 3442 CKNITNVIQRAVPGGGKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGICAKFDTE 3621
            CKN+ NVIQRAVPGG KIRGPYCR C+S + IVKVNVPYGAKLLCQELFSMGI  KF+T 
Sbjct: 1142 CKNVANVIQRAVPGGRKIRGPYCRVCESVDEIVKVNVPYGAKLLCQELFSMGISLKFETR 1201

Query: 3622 QC 3627
             C
Sbjct: 1202 LC 1203


>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1219

 Score = 1679 bits (4348), Expect = 0.0
 Identities = 827/1160 (71%), Positives = 953/1160 (82%), Gaps = 6/1160 (0%)
 Frame = +1

Query: 166  LTKFCRQASMEFFSEYGLISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKKGQGEW 345
            L  FC++AS  FF +YG+ISHQI SYN FI  GIQ++FDS+GEI VEPGYDPSKKG+GEW
Sbjct: 64   LRNFCKKASAGFFEKYGVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYDPSKKGEGEW 123

Query: 346  RYAAVTFGKVTLEPPTFWSTEK-PQKDSKEFLKLMPRHARLQNMTYSSRMKVEMSVQVYT 522
            ++A+V FGKVTL+ P FW+ EK    + +E+L L PRHARLQNMTYS+R+ VE  VQV+T
Sbjct: 124  KHASVKFGKVTLDRPKFWAGEKFSAYNGEEYLDLWPRHARLQNMTYSARIIVETHVQVFT 183

Query: 523  QKLMKSDKFKTGKEQFVQKHVESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDFDHGGY 702
            +KL++SDKFKTG EQFV K    EDKRDV IGRIPVMV S LCWM+G  + DCDFDHGGY
Sbjct: 184  KKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRPDCDFDHGGY 243

Query: 703  FLIKGAEKTFIAQEQICLKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESIQG-LK 879
            F++KGAEK FIAQEQICLKRLWVS    W VAYRS  KR RVYLKL +   +E I+G  K
Sbjct: 244  FIVKGAEKIFIAQEQICLKRLWVSNHSTWMVAYRSGEKRNRVYLKLTETLKHEHIKGEAK 303

Query: 880  ILNVQFLSMSIPLWILFFYLGMSSDREIIEMIDVNLDDPILVNILIATIKYADENCEGFR 1059
             L+V FL+  +P+W+LFF LG+SSDREI+++IDV++ D  ++NIL+A+I  AD+NCE FR
Sbjct: 304  ALSVYFLA-EMPIWVLFFALGVSSDREIVDLIDVDIKDTNIINILVASIHDADKNCEDFR 362

Query: 1060 KEGKPLKYIDDLMSQTKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKCLLLSYTGR 1239
            K  K L Y+D L+   KFPP E +++C+ +YLFP L  LK KA FLGYMVKCLLLSY GR
Sbjct: 363  KGKKALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIGR 422

Query: 1240 RKCENRDDFRNKXXXXXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRPIEHYLDAS 1419
            RK +NRDDFRNK               HI+HAERRMVKA+QRDL GDR ++P+EHYLDAS
Sbjct: 423  RKVDNRDDFRNKRLDLAGELLERELRAHIKHAERRMVKALQRDLCGDRQVQPLEHYLDAS 482

Query: 1420 IITNGLSRAFSTGAWSHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVAYTGKVGDA 1599
            IITNGLSRAFSTG W HP+KR ER +GVVATLRRTNPLQMTADLRKTRQQV YTGKVGDA
Sbjct: 483  IITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGDA 542

Query: 1600 RFPNPSHWGKLCFLSTPDGENCGLVKNMAATGLVSTNLVEPLLDKLLGCGMENLADDPSL 1779
            R+P+PSHWGK+CFLSTPDGENCGLVKN+A+ GLVST +++PLL+ L  CGM+ L DD S 
Sbjct: 543  RYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLKPLLETLFRCGMQKLVDD-SA 601

Query: 1780 TSLKGRDKVFLNGEWVGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGEVRIFSDAG 1959
            TSL G+ KV L+G+WVG+C+ S  FV  LR KRR  ++P +VE+KRD+QQ EVRIFSDAG
Sbjct: 602  TSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVRIFSDAG 661

Query: 1960 RILRPLLVVENLKKINM----FKGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIKYLLT 2127
            RI+RPLLVV NLK I       KGG Y FQ+                 C+TAWG++YLL 
Sbjct: 662  RIMRPLLVVSNLKNIKSLKDGMKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGVEYLLK 721

Query: 2128 GDKDQPSVDYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNI 2307
             DK+ P V+YTHCELD+SFLLGLSCG+IPFANHDHARRVLYQSEKHSQQAIGFST NPN 
Sbjct: 722  ADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNA 781

Query: 2308 RVDTLSHQLYYPQRPLFRTMLSDNLGRPEYPRGHTSVLPKPEYFNGQNAIVAVNVHQGYN 2487
            RVDT +HQLYYPQRPLF TMLSD+LG+P+  R    +L +PEY+NGQ AIVAVNVH GYN
Sbjct: 782  RVDTNTHQLYYPQRPLFGTMLSDSLGKPKCGRHQKGMLSRPEYYNGQCAIVAVNVHLGYN 841

Query: 2488 QEDSLVMNQASLERGMFRTEHVRNYKAEVDNKELFETKRLKTKDRVDFGKIQSKIGRVDS 2667
            QEDS+VMN+ASLERGMFR+EHVR+YKAEVDNKE    K+ K +D V+FGK QSKIGRVDS
Sbjct: 842  QEDSVVMNRASLERGMFRSEHVRSYKAEVDNKEAM-GKKSKVEDSVNFGKTQSKIGRVDS 900

Query: 2668 LDDDGFPFIGANLQSGDIVIGRRAESGADHSIKLKHTERGKVQKVVLSANDEGTNYAVVS 2847
            LDDDGFPFIGANLQSGDI+IG+ AESGADHS+K+KHTERG VQKV+LSAND+G N+AVVS
Sbjct: 901  LDDDGFPFIGANLQSGDIIIGKYAESGADHSVKMKHTERGMVQKVLLSANDDGKNFAVVS 960

Query: 2848 LRQVRLPCLGDKFSSMHGQKGVVGLLESQENFPFTREGIVPDIVINPHAFPTRQTPGQLL 3027
            LRQVR PCLGDKFSSMHGQKGV+G LESQENFPFT +GIVPDIVINPHAFP+RQTPGQLL
Sbjct: 961  LRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLL 1020

Query: 3028 EAALGKGIACVGSMRYATPFSTPSVDVITDQLHRSGYSRWGSERLYNGHNGEMMRALIFI 3207
            EAALGKGIA  G  +YATPFS  SVD I  QLH  G+SRWGSER+YNG  GEM+ +LIF+
Sbjct: 1021 EAALGKGIALGGGEKYATPFSALSVDAILKQLHGRGFSRWGSERVYNGRTGEMVHSLIFM 1080

Query: 3208 GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGAAANL 3387
            GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL+AHGAAANL
Sbjct: 1081 GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANL 1140

Query: 3388 HERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGKIRGPYCRFCDSSENIVKVNVPYGAK 3567
            HERLF LSD SQMHICGKCKN+ NVIQR+ P GGKIRGP+CRFC+S E+IVKV+VPYGAK
Sbjct: 1141 HERLFTLSDSSQMHICGKCKNMANVIQRSAP-GGKIRGPFCRFCESVEDIVKVDVPYGAK 1199

Query: 3568 LLCQELFSMGICAKFDTEQC 3627
            LLCQELFSMGI  KFDTE C
Sbjct: 1200 LLCQELFSMGISLKFDTEIC 1219


>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum
            lycopersicum]
          Length = 1219

 Score = 1664 bits (4309), Expect = 0.0
 Identities = 820/1160 (70%), Positives = 947/1160 (81%), Gaps = 6/1160 (0%)
 Frame = +1

Query: 166  LTKFCRQASMEFFSEYGLISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKKGQGEW 345
            L  FC++AS  FF +YGLISHQI SYN FI  GIQK+FDS+GEI VEPGYDPSKKG+GEW
Sbjct: 64   LRNFCKKASAGFFEKYGLISHQIDSYNDFIRYGIQKVFDSVGEIHVEPGYDPSKKGEGEW 123

Query: 346  RYAAVTFGKVTLEPPTFWSTEKPQK-DSKEFLKLMPRHARLQNMTYSSRMKVEMSVQVYT 522
            ++A+V FG V L+ P FW+ EK    + +E+L + PRHARLQNMTYS+R+ VE  VQV+T
Sbjct: 124  KHASVKFGNVILDRPKFWAGEKYSAYNGEEYLNMWPRHARLQNMTYSARIIVETHVQVFT 183

Query: 523  QKLMKSDKFKTGKEQFVQKHVESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDFDHGGY 702
            +KL++SDKFKTG EQFV K    EDKRDV IGRIPVMV S LCWM+G  + DC+FDHGGY
Sbjct: 184  KKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRLDCEFDHGGY 243

Query: 703  FLIKGAEKTFIAQEQICLKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESIQG-LK 879
            F++KGAEK FIAQEQ+CLKRLWVS    W VAYRS  KR RVYLKL +   +E I+G  K
Sbjct: 244  FIVKGAEKIFIAQEQMCLKRLWVSNHYTWMVAYRSGEKRNRVYLKLTETLKHEQIKGEAK 303

Query: 880  ILNVQFLSMSIPLWILFFYLGMSSDREIIEMIDVNLDDPILVNILIATIKYADENCEGFR 1059
             L+V FL+  +P+W+LFF LG+SSDRE++++IDV++ D  ++NIL+A+I  AD+NCE FR
Sbjct: 304  SLSVYFLA-EMPIWVLFFALGVSSDREVVDLIDVDIKDNKIINILVASIHDADKNCEDFR 362

Query: 1060 KEGKPLKYIDDLMSQTKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKCLLLSYTGR 1239
            K  + L Y+D L+   KFPP E +++C+ +YLFP L  LK KA FLGYMVKCLLLSY GR
Sbjct: 363  KGKRALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIGR 422

Query: 1240 RKCENRDDFRNKXXXXXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRPIEHYLDAS 1419
            RK +NRDDFRNK              VHI+HAERRMVKA+QRDL GDR + PIEHYLDAS
Sbjct: 423  RKVDNRDDFRNKRLDLAGELLERELRVHIKHAERRMVKALQRDLCGDRQVHPIEHYLDAS 482

Query: 1420 IITNGLSRAFSTGAWSHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVAYTGKVGDA 1599
            IITNGLSRAFSTG W HP+KR ER +GVVATLRRTNPLQMTADLRKTRQQV YTGKVGDA
Sbjct: 483  IITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGDA 542

Query: 1600 RFPNPSHWGKLCFLSTPDGENCGLVKNMAATGLVSTNLVEPLLDKLLGCGMENLADDPSL 1779
            R+PNPSHWGK+CFLSTPDGENCGLVKN+A+ GLVST ++ PLL+ L  CGM+ L DD + 
Sbjct: 543  RYPNPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLMPLLETLFRCGMQKLVDDCA- 601

Query: 1780 TSLKGRDKVFLNGEWVGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGEVRIFSDAG 1959
            TSL G+ KV L+G+WVG+C+ S  FV  LR KRR  ++P +VE+KRD+QQ EVRIFSDAG
Sbjct: 602  TSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVRIFSDAG 661

Query: 1960 RILRPLLVVENLKKINMF----KGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIKYLLT 2127
            RI+RPLLVV NLK I       KGG Y FQ+                 C+TAWG++YLL 
Sbjct: 662  RIMRPLLVVSNLKNIKALNGGVKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGVEYLLK 721

Query: 2128 GDKDQPSVDYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNI 2307
             DK+ P V+YTHCELD+SFLLGLSCG+IPFANHDHARRVLYQSEKHSQQAIGFST NPNI
Sbjct: 722  ADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNI 781

Query: 2308 RVDTLSHQLYYPQRPLFRTMLSDNLGRPEYPRGHTSVLPKPEYFNGQNAIVAVNVHQGYN 2487
            RVDT +HQLYYPQRPLF TMLSD+LG+P+  R    +L +PEY+NGQ AIVAVNVH GYN
Sbjct: 782  RVDTNTHQLYYPQRPLFGTMLSDSLGKPKCARHQRGMLSRPEYYNGQCAIVAVNVHLGYN 841

Query: 2488 QEDSLVMNQASLERGMFRTEHVRNYKAEVDNKELFETKRLKTKDRVDFGKIQSKIGRVDS 2667
            QEDS+VMN+ASLERGMFR+EHVR+YKAEVDN E    K+ K +D V+FGK QSKIGRVD 
Sbjct: 842  QEDSVVMNRASLERGMFRSEHVRSYKAEVDNMEA-TGKKSKAEDSVNFGKTQSKIGRVDC 900

Query: 2668 LDDDGFPFIGANLQSGDIVIGRRAESGADHSIKLKHTERGKVQKVVLSANDEGTNYAVVS 2847
            LDDDG P+IGANLQSGDI+IG+ AESGADHS+K+KHTE+G VQKV+LSANDEG N+AVVS
Sbjct: 901  LDDDGLPYIGANLQSGDIIIGKFAESGADHSVKMKHTEKGMVQKVLLSANDEGKNFAVVS 960

Query: 2848 LRQVRLPCLGDKFSSMHGQKGVVGLLESQENFPFTREGIVPDIVINPHAFPTRQTPGQLL 3027
            LRQVR PCLGDKFSSMHGQKGV+G LESQENFPFT +GIVPDIVINPHAFP+RQTPGQLL
Sbjct: 961  LRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLL 1020

Query: 3028 EAALGKGIACVGSMRYATPFSTPSVDVITDQLHRSGYSRWGSERLYNGHNGEMMRALIFI 3207
            EAALGKGIA  G  +YATPFS  SVD I  QLH  G+SRWG+ER+YNG  GEM+ +LIF+
Sbjct: 1021 EAALGKGIALGGGEKYATPFSALSVDAILKQLHGRGFSRWGNERVYNGRTGEMVHSLIFM 1080

Query: 3208 GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGAAANL 3387
            GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL+AHGAAANL
Sbjct: 1081 GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANL 1140

Query: 3388 HERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGKIRGPYCRFCDSSENIVKVNVPYGAK 3567
            HERLF LSD SQMHICGKCKN+ NVIQR VP GGK+RGP+CRFC+S E+IVKV VPYGAK
Sbjct: 1141 HERLFTLSDSSQMHICGKCKNMANVIQRPVP-GGKVRGPFCRFCESVEDIVKVGVPYGAK 1199

Query: 3568 LLCQELFSMGICAKFDTEQC 3627
            LLCQELFSMGI  KFDTE C
Sbjct: 1200 LLCQELFSMGISLKFDTEIC 1219


>ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica]
            gi|462422378|gb|EMJ26641.1| hypothetical protein
            PRUPE_ppa000410mg [Prunus persica]
          Length = 1200

 Score = 1657 bits (4290), Expect = 0.0
 Identities = 806/1164 (69%), Positives = 956/1164 (82%), Gaps = 5/1164 (0%)
 Frame = +1

Query: 151  LSEELLTKFCRQASMEFFSEYGLISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKK 330
            L E  L  FC++A++ FF+EYGLISHQI+SYN FI+NGIQ++FDS GEI VEPGYDPSKK
Sbjct: 46   LGEGFLKFFCKEAAIAFFNEYGLISHQINSYNDFIKNGIQRVFDSFGEIIVEPGYDPSKK 105

Query: 331  GQGEWRYAAVTFGKVTLEPPTFWSTEKPQKDSKEFLKLMPRHARLQNMTYSSRMKVEMSV 510
            G+ EWRYA+V FGKVTL  P+FW       D KE+ K++PRHARLQNM+Y+S+MKV ++V
Sbjct: 106  GESEWRYASVKFGKVTLGMPSFWGGSD---DEKEY-KMLPRHARLQNMSYASKMKVNITV 161

Query: 511  QVYTQKLMKSDKFKTGKEQFVQKHVESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDFD 690
            +VYTQKL+ SDKFKTGK Q++ K + S D RD++IG +PVMV+S+LCWM   +KGDCDFD
Sbjct: 162  EVYTQKLVSSDKFKTGKSQYLDKQILSTDTRDIIIGSVPVMVKSDLCWMKDFEKGDCDFD 221

Query: 691  HGGYFLIKGAEKTFIAQEQICLKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESIQ 870
            HGGYF+IKGAEKTFIAQEQ CLKRL ++     +VAYRSE+KR R+ ++L+ +   E+I+
Sbjct: 222  HGGYFIIKGAEKTFIAQEQSCLKRLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIE 281

Query: 871  GL-KILNVQFLSMSIPLWILFFYLGMSSDREIIEMIDVNLDDPILVNILIATIKYADENC 1047
            G+ K+L V F+S  IP+WI FF LG+SSDRE++ +ID + +D  + NIL A+I+ AD+  
Sbjct: 282  GVEKVLTVYFMSTEIPVWIWFFALGVSSDREVMNLIDYDSEDASISNILFASIRDADKLN 341

Query: 1048 E----GFRKEGKPLKYIDDLMSQTKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKC 1215
            +    GFR+    LKY+D+++ +T FPPGE +++C+  YLFP L  LK KA FLGYMVK 
Sbjct: 342  DKVDGGFRRGKNALKYVDEVIRKTAFPPGESMEECISLYLFPNLKGLKQKARFLGYMVKS 401

Query: 1216 LLLSYTGRRKCENRDDFRNKXXXXXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRP 1395
            LL +Y GRRKC+NRDDFRNK               HI HA RRM KA+QRDLYGDR +RP
Sbjct: 402  LLQAYAGRRKCDNRDDFRNKRLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRAVRP 461

Query: 1396 IEHYLDASIITNGLSRAFSTGAWSHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVA 1575
            IEHYLDASI+TNG+SRAFSTGAW HPFKR ER +GVVAT+ R NPLQ   D+RKTRQQV 
Sbjct: 462  IEHYLDASIVTNGISRAFSTGAWCHPFKRMERMSGVVATVGRANPLQTMVDMRKTRQQVQ 521

Query: 1576 YTGKVGDARFPNPSHWGKLCFLSTPDGENCGLVKNMAATGLVSTNLVEPLLDKLLGCGME 1755
            YTGKVGDAR+P+PSHWGK+CFLSTPDGENCGLVKN+A TGLVSTN++E L+ +LL CGME
Sbjct: 522  YTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNVLESLIPQLLTCGME 581

Query: 1756 NLADDPSLTSLKGRDKVFLNGEWVGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGE 1935
             L DD + TSL+G+DKVFLNG+WVG+C+ SLSFV+ LR  RR K++P +VEIKRD  QGE
Sbjct: 582  KLVDD-TFTSLRGKDKVFLNGDWVGVCEDSLSFVLELRRMRRRKKLPHQVEIKRDVHQGE 640

Query: 1936 VRIFSDAGRILRPLLVVENLKKINMFKGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIK 2115
            VRIFSDAGRILRPLLVVENL K+   KGG   FQ                  C TAWGIK
Sbjct: 641  VRIFSDAGRILRPLLVVENLNKVKASKGGKSSFQYFLDNGIIELIGAEEEEDCSTAWGIK 700

Query: 2116 YLLTGDKDQPSVDYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTT 2295
            YL   DK + +  +THCELD+SFLLGLSCGIIP+ANHDHARRVLYQ++KHSQQAIGFSTT
Sbjct: 701  YLFMEDKGKSATKFTHCELDMSFLLGLSCGIIPYANHDHARRVLYQAQKHSQQAIGFSTT 760

Query: 2296 NPNIRVDTLSHQLYYPQRPLFRTMLSDNLGRPEYPRGHTSVLPKPEYFNGQNAIVAVNVH 2475
            NPN+RVDTLSHQL+YPQRPLF+TM SD LG+P     H  ++PKPEY+NGQNAIVAVNVH
Sbjct: 761  NPNLRVDTLSHQLHYPQRPLFQTMTSDCLGKPGR---HNRIVPKPEYYNGQNAIVAVNVH 817

Query: 2476 QGYNQEDSLVMNQASLERGMFRTEHVRNYKAEVDNKELFETKRLKTKDRVDFGKIQSKIG 2655
             G+NQEDS+VMN+ASLERGMFR+EH+R+YKAEVDNKE  + KR K  D V+FGK+QSK G
Sbjct: 818  LGFNQEDSIVMNRASLERGMFRSEHIRSYKAEVDNKESLD-KRRKPDDCVNFGKMQSKFG 876

Query: 2656 RVDSLDDDGFPFIGANLQSGDIVIGRRAESGADHSIKLKHTERGKVQKVVLSANDEGTNY 2835
            RVDSLDDDGFP++GANLQSGDI+IGR +ESGADHSIKLKHTERG VQKV+LS+ND+G N+
Sbjct: 877  RVDSLDDDGFPYVGANLQSGDIIIGRCSESGADHSIKLKHTERGMVQKVLLSSNDDGKNF 936

Query: 2836 AVVSLRQVRLPCLGDKFSSMHGQKGVVGLLESQENFPFTREGIVPDIVINPHAFPTRQTP 3015
            AVVSLRQVR PCLGDKFSSMHGQKGV+G LESQENFPFT +G+VPDIVINPHAFP+RQTP
Sbjct: 937  AVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTP 996

Query: 3016 GQLLEAALGKGIACVGSMRYATPFSTPSVDVITDQLHRSGYSRWGSERLYNGHNGEMMRA 3195
            GQLLEAALGKGIAC GS RYATPFST SVD ITDQLH +G+SRWG+ER+YNG  G M+R+
Sbjct: 997  GQLLEAALGKGIACGGSKRYATPFSTLSVDDITDQLHSAGFSRWGNERVYNGATGAMVRS 1056

Query: 3196 LIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGA 3375
            LIF+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL+AHGA
Sbjct: 1057 LIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA 1116

Query: 3376 AANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGKIRGPYCRFCDSSENIVKVNVP 3555
            +ANLHERLF LSD SQMH+C KCKN+  VI R V GG KIRGP+CR CDS++++V+VNVP
Sbjct: 1117 SANLHERLFTLSDSSQMHVCQKCKNVAYVILRTVAGGRKIRGPHCRICDSADDLVRVNVP 1176

Query: 3556 YGAKLLCQELFSMGICAKFDTEQC 3627
            YGAKLLCQELFSMGI  KF+T  C
Sbjct: 1177 YGAKLLCQELFSMGISLKFETRFC 1200


>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1181

 Score = 1647 bits (4266), Expect = 0.0
 Identities = 817/1193 (68%), Positives = 957/1193 (80%), Gaps = 6/1193 (0%)
 Frame = +1

Query: 58   AVTDTAEALNPSSTSK--DVNKASTSTANDDTCLSE---ELLTKFCRQASMEFFSEYGLI 222
            A +D  E + PSS  +  D++        D T L+E   E L  FC++A+  FF EYGLI
Sbjct: 3    ASSDYMEDVGPSSKGEVDDMDMDMDEDLMDTTNLNELGKETLQSFCKKAASLFFDEYGLI 62

Query: 223  SHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKKGQGEWRYAAVTFGKVTLEPPTFWS 402
            SHQI+SYN+FI +G+Q++FDS GE+ VEPGYD SK+  GEWR A+V FGKVTL+ P+FW 
Sbjct: 63   SHQINSYNAFINSGLQRVFDSFGEVAVEPGYDSSKQKDGEWRRASVRFGKVTLDRPSFWG 122

Query: 403  TEKPQKDSKEFLKLMPRHARLQNMTYSSRMKVEMSVQVYTQKLMKSDKFKTGKEQFVQKH 582
                  +   F    PRHARLQNMTYS+RMK+ ++VQVYTQ + +SDKFKTG ++ VQK+
Sbjct: 123  GTSSDAEHNMF----PRHARLQNMTYSARMKIHVNVQVYTQTVGRSDKFKTGIDKVVQKN 178

Query: 583  VESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDFDHGGYFLIKGAEKTFIAQEQICLKR 762
            V   + R+++IGRIPVMV+S+LCW+  ++KGDCDFDHGGYFLIKGAEK FIAQEQIC+KR
Sbjct: 179  VVHTENREIIIGRIPVMVKSDLCWLTTVEKGDCDFDHGGYFLIKGAEKVFIAQEQICMKR 238

Query: 763  LWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESIQGLKI-LNVQFLSMSIPLWILFFYL 939
            LW+S    W+V+Y+SE+KR R+ ++L++L   E I+G K  L V FLS  IPLWILFF L
Sbjct: 239  LWISNSQGWTVSYKSEVKRNRLIVRLVELSKLEYIKGEKKGLCVYFLSTEIPLWILFFAL 298

Query: 940  GMSSDREIIEMIDVNLDDPILVNILIATIKYADENCEGFRKEGKPLKYIDDLMSQTKFPP 1119
            G+ SD+E+I++ID   +D  +VNI  A+I  ADE CE FR+E + L Y+D L+ +T+FPP
Sbjct: 299  GVRSDKEVIDLIDYASNDASIVNIFFASIHDADEKCEHFRREDRALDYVDKLLKKTRFPP 358

Query: 1120 GEPIKDCMDKYLFPTLHDLKLKALFLGYMVKCLLLSYTGRRKCENRDDFRNKXXXXXXXX 1299
             E I+D +  YLFP L+  + KA FLGYMVKCLL +YTG RKC+NRD FRNK        
Sbjct: 359  KESIEDAISAYLFPRLNSRRHKARFLGYMVKCLLEAYTGHRKCDNRDSFRNKRFELASEL 418

Query: 1300 XXXXXXVHIRHAERRMVKAMQRDLYGDRNLRPIEHYLDASIITNGLSRAFSTGAWSHPFK 1479
                  VH+ HA RRM KA+QRDLYGDR++ PIEHYLDASI+TNGL+RAFSTGAW HPFK
Sbjct: 419  LERELKVHVSHALRRMTKALQRDLYGDRDVHPIEHYLDASIVTNGLTRAFSTGAWCHPFK 478

Query: 1480 RTERTAGVVATLRRTNPLQMTADLRKTRQQVAYTGKVGDARFPNPSHWGKLCFLSTPDGE 1659
              ER +GVV  L R NPLQ   DLRKTRQQV YTGKVGDAR+P+PSHWG++CFLSTPDGE
Sbjct: 479  WMERVSGVVGNLGRANPLQTMIDLRKTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDGE 538

Query: 1660 NCGLVKNMAATGLVSTNLVEPLLDKLLGCGMENLADDPSLTSLKGRDKVFLNGEWVGICK 1839
            NCGLVKN+A TG+VSTN+ E L+DKL   GME L DD + T L G+ KVFLNGEWVG+C+
Sbjct: 539  NCGLVKNLAVTGVVSTNISESLVDKLFDSGMEKLVDD-TYTKLDGKHKVFLNGEWVGVCE 597

Query: 1840 GSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGEVRIFSDAGRILRPLLVVENLKKINMFKG 2019
             S  FV  LRS RR +++P +VEIKRD+QQ EVRIFSDAGRILRPLLVVENL KI  FKG
Sbjct: 598  DSCLFVGELRSMRRRRELPYQVEIKRDEQQREVRIFSDAGRILRPLLVVENLDKIKAFKG 657

Query: 2020 GGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIKYLLTGDKDQPSVDYTHCELDLSFLLGLS 2199
            G Y+F S                 C TAWGIK+LL   + +  + Y+HCELD+SFLLGLS
Sbjct: 658  GNYIFTSLLDKGIIEFIGTEEEEDCCTAWGIKFLLADIEGKQPMKYSHCELDMSFLLGLS 717

Query: 2200 CGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMLSDN 2379
            CGIIPFANHDHARRVLYQ++KHSQQAIGFSTTNPNIRVDTLSHQL+YPQRPLFRTM+SD 
Sbjct: 718  CGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLHYPQRPLFRTMISDC 777

Query: 2380 LGRPEYPRGHTSVLPKPEYFNGQNAIVAVNVHQGYNQEDSLVMNQASLERGMFRTEHVRN 2559
            L           VLPKPE FNGQNAIVAVNVH GYNQEDSLVMN+ASLERGMFR+EH+R+
Sbjct: 778  L-----------VLPKPELFNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRS 826

Query: 2560 YKAEVDNKELFETKRLKTKDRVDFGKIQSKIGRVDSLDDDGFPFIGANLQSGDIVIGRRA 2739
            YKAEVDNKEL + KR K++D + FGKIQSKIGRVDSLDDDGFPFIGAN+QSGDIVIG+ A
Sbjct: 827  YKAEVDNKELTD-KRRKSEDSITFGKIQSKIGRVDSLDDDGFPFIGANMQSGDIVIGKCA 885

Query: 2740 ESGADHSIKLKHTERGKVQKVVLSANDEGTNYAVVSLRQVRLPCLGDKFSSMHGQKGVVG 2919
            ESGADHS+KLKHTERG VQKVVLS+NDEG N+AVVSLRQVR PCLGDKFSSMHGQKGV+G
Sbjct: 886  ESGADHSVKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLG 945

Query: 2920 LLESQENFPFTREGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACVGSMRYATPFSTPS 3099
             LESQENFPFT +G+VPDIVINPHAFP+RQTPGQLLEAALGKGIAC GS RYATPFST S
Sbjct: 946  FLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSKRYATPFSTLS 1005

Query: 3100 VDVITDQLHRSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPV 3279
            VD I DQLHR+ +SRWG+ER+YNG  GEM+R+LIF+GPTFYQRL+HMAEDKVKFRNTGPV
Sbjct: 1006 VDDIIDQLHRAKFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMAEDKVKFRNTGPV 1065

Query: 3280 HPLTRQPVADRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITN 3459
            HPLTRQPVADRKRFGGIKFGEMERDCL+AHGA+ANLHERLF LSD S+MHIC KCKN+ N
Sbjct: 1066 HPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSEMHICQKCKNVAN 1125

Query: 3460 VIQRAVPGGGKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGICAKFDT 3618
            VIQR VPGG KIRGPYCR C+S +++VKV+VPYGAKLLCQELFSMGI  KFDT
Sbjct: 1126 VIQRGVPGGRKIRGPYCRVCESVDDLVKVSVPYGAKLLCQELFSMGISLKFDT 1178


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score = 1637 bits (4238), Expect = 0.0
 Identities = 808/1201 (67%), Positives = 957/1201 (79%), Gaps = 8/1201 (0%)
 Frame = +1

Query: 49   DDNAVTDTAEALNPS---STSKDVNKASTSTANDDTCLSEELLTKFCRQASMEFFSEYGL 219
            DD  +    E L+P     T  D +  S      D  L E  L  FC+++SM FF++YGL
Sbjct: 8    DDIEMNSEGEDLSPGMDLDTDDDDDYYSEPVNIHD--LGEAFLKDFCKKSSMAFFNQYGL 65

Query: 220  ISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKKGQGEWRYAAVTFGKVTLEPPTFW 399
            ISHQI+SYN FI+NGIQK FD  G+I V+PGYDPSKKG GEWRYA V FGKVTL+ P FW
Sbjct: 66   ISHQINSYNDFIKNGIQKAFDFFGDILVQPGYDPSKKGDGEWRYATVKFGKVTLDKPKFW 125

Query: 400  STEKPQKDSKEFLKLMPRHARLQNMTYSSRMKVEMSVQVYTQKLMKSDKFKTGKEQFVQK 579
                  K+      ++PRHARLQNMTYSSRMK+ +S+++YTQKL+ SDKFKTGK+Q+V K
Sbjct: 126  GGAASGKE----YNMLPRHARLQNMTYSSRMKINISLEIYTQKLVSSDKFKTGKDQYVDK 181

Query: 580  H-VE-SEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDFDHGGYFLIKGAEKTFIAQEQIC 753
              VE + D RDV IGR+PVMV S+LCWM   +K DC+FD GGYFLIKGAEK FIAQEQIC
Sbjct: 182  EPVEGASDNRDVFIGRLPVMVNSDLCWMKDGQKRDCEFDRGGYFLIKGAEKIFIAQEQIC 241

Query: 754  LKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESIQGL-KILNVQFLSMSIPLWILF 930
            L+RLW+S    W+VAYRSE+KR R+ ++L++   +E ++   K+LNV FLS  +P+WILF
Sbjct: 242  LRRLWISNVQGWTVAYRSEVKRNRLIIRLVENSKSEDLKSKEKVLNVYFLSTEVPVWILF 301

Query: 931  FYLGMSSDREIIEMIDVNLDDPILVNILIATIKYAD--ENCEGFRKEGKPLKYIDDLMSQ 1104
            F LG+SSD+EI+++ID   DDP ++NIL A+++  D  +  + FR+  + L ++D+ + +
Sbjct: 302  FALGVSSDKEIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKRALTFLDNEIRK 361

Query: 1105 TKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKCLLLSYTGRRKCENRDDFRNKXXX 1284
            T FPP + I+DC++ YLF +L   K K  FLGYMVKCLL +YTGRRKC+NRDDFRNK   
Sbjct: 362  TSFPPADKIEDCLNLYLFASLKGSKQKCHFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFE 421

Query: 1285 XXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRPIEHYLDASIITNGLSRAFSTGAW 1464
                       VHI HA RRM KA+QRDLYGDR + PIEHYLDASIITNGLSRAFSTGAW
Sbjct: 422  LAAELLERELKVHIAHARRRMEKALQRDLYGDRQVHPIEHYLDASIITNGLSRAFSTGAW 481

Query: 1465 SHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVAYTGKVGDARFPNPSHWGKLCFLS 1644
            +H FKR ER +GVVATL R NPLQ  A+LR+TRQQVAYTGKVGDAR+P+PSHWG++CFLS
Sbjct: 482  AHAFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLS 541

Query: 1645 TPDGENCGLVKNMAATGLVSTNLVEPLLDKLLGCGMENLADDPSLTSLKGRDKVFLNGEW 1824
            TPDGENCGL+KN++ TGLVS N  + +   L  CGMENL D+ S TS  G+ ++FL+GEW
Sbjct: 542  TPDGENCGLIKNLSGTGLVSLNTKKSITPTLFRCGMENLVDNTS-TSFCGKYRIFLDGEW 600

Query: 1825 VGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGEVRIFSDAGRILRPLLVVENLKKI 2004
            VG+C+ SLSFV N+R KRR      +VE+KRD+Q  EVRIFSDAGRILRPLLVVENL +I
Sbjct: 601  VGVCEDSLSFVTNVRRKRRRNPFLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNRI 660

Query: 2005 NMFKGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIKYLLTGDKDQPSVDYTHCELDLSF 2184
            +  KG  Y FQS                 C+ AW IK+L+   +D+ +  Y+HCELD+SF
Sbjct: 661  DKSKGENYTFQSLLDKGIIELIGTEEEEDCRVAWSIKHLM---EDEGTTKYSHCELDMSF 717

Query: 2185 LLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRT 2364
            LLGLSCG++PFANHDHARR L+QS+KHS QAIGFS TN N RVDTLSHQL+YPQRPLFRT
Sbjct: 718  LLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSPTNSNFRVDTLSHQLHYPQRPLFRT 777

Query: 2365 MLSDNLGRPEYPRGHTSVLPKPEYFNGQNAIVAVNVHQGYNQEDSLVMNQASLERGMFRT 2544
            M +D LG P Y   H  +LPKPE++NGQNAIVAVNVH GYNQEDSLVMN+ASLERGMFR+
Sbjct: 778  MTADCLGTPGYLSSHAGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRS 837

Query: 2545 EHVRNYKAEVDNKELFETKRLKTKDRVDFGKIQSKIGRVDSLDDDGFPFIGANLQSGDIV 2724
            EH+R+YKAEVDNKE  E KR K+ D ++FGK QSKIGRVDSLDDDGFP+IGANLQSGDIV
Sbjct: 838  EHIRSYKAEVDNKESSE-KRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIV 896

Query: 2725 IGRRAESGADHSIKLKHTERGKVQKVVLSANDEGTNYAVVSLRQVRLPCLGDKFSSMHGQ 2904
            IGR AESGADHSIKLKHTE+G VQKVVLS+ND+G NYAVVSLRQVR PCLGDKFSSMHGQ
Sbjct: 897  IGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQ 956

Query: 2905 KGVVGLLESQENFPFTREGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACVGSMRYATP 3084
            KGV+G LESQENFPFT +GIVPDIVINPHAFP+RQTPGQLLEAALGKGIA  GS++YATP
Sbjct: 957  KGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATP 1016

Query: 3085 FSTPSVDVITDQLHRSGYSRWGSERLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFR 3264
            FSTPSVD ITDQLHR+G+SRWGSER+YNG  GEMMR+LIF+GPTFYQRLIHMAEDKVKFR
Sbjct: 1017 FSTPSVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFR 1076

Query: 3265 NTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKC 3444
            NTGPVHPLTRQPVADRKRFGGIKFGEMERDCL+AHGA+ANLHERLF LSD SQMH+C KC
Sbjct: 1077 NTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKC 1136

Query: 3445 KNITNVIQRAVPGGGKIRGPYCRFCDSSENIVKVNVPYGAKLLCQELFSMGICAKFDTEQ 3624
            KN+ +VIQR+V GG K+RGPYCR C+S ++IV+VNVPYGAKLLCQELFSMGI  KF+T+ 
Sbjct: 1137 KNVASVIQRSVAGGRKMRGPYCRVCESFDDIVRVNVPYGAKLLCQELFSMGINLKFETQL 1196

Query: 3625 C 3627
            C
Sbjct: 1197 C 1197


>ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Fragaria
            vesca subsp. vesca]
          Length = 1201

 Score = 1622 bits (4201), Expect = 0.0
 Identities = 787/1160 (67%), Positives = 933/1160 (80%), Gaps = 1/1160 (0%)
 Frame = +1

Query: 151  LSEELLTKFCRQASMEFFSEYGLISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKK 330
            L E  L +FC++AS+ FF EYGL+SHQI+SYN F+ENGIQ++FDS GEI VEP +DPSKK
Sbjct: 49   LGEVFLDEFCKEASVSFFKEYGLLSHQINSYNDFVENGIQRVFDSFGEIVVEPNFDPSKK 108

Query: 331  GQGEWRYAAVTFGKVTLEPPTFWSTEKPQKDSKEFLKLMPRHARLQNMTYSSRMKVEMSV 510
            G  +WR+AA+ FGKVTL  P FW       DS +   ++PRHARLQNMTYS+RM V ++V
Sbjct: 109  GNADWRFAAIKFGKVTLSKPCFWGGS----DSDKEYNMLPRHARLQNMTYSARMSVNITV 164

Query: 511  QVYTQKLMKSDKFKTGKEQFVQKHVESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDFD 690
            QVYTQ L++SDKFKTG EQ ++K   S D RD++IGRIPVMV+SNLCWM G++KGDC+FD
Sbjct: 165  QVYTQNLVESDKFKTGTEQLLEKTTLSTDSRDIIIGRIPVMVKSNLCWMKGVEKGDCEFD 224

Query: 691  HGGYFLIKGAEKTFIAQEQICLKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESIQ 870
             GGYF+I GAEKTFIAQEQ CLKRL ++     +VAYRSE+KR R+ ++L  +   E+++
Sbjct: 225  QGGYFIINGAEKTFIAQEQSCLKRLLITNSQGLTVAYRSEVKRHRLIIRLSGISKLENVE 284

Query: 871  GL-KILNVQFLSMSIPLWILFFYLGMSSDREIIEMIDVNLDDPILVNILIATIKYADENC 1047
            G+ K+L+V F+S  IP+WI FF LG+SSD+E+I++ID  ++D  + NIL A+I+ ADE  
Sbjct: 285  GVEKVLSVYFMSTEIPVWIWFFALGVSSDKEVIDLIDYGIEDASISNILFASIRDADERK 344

Query: 1048 EGFRKEGKPLKYIDDLMSQTKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKCLLLS 1227
            + FR+    L+Y+++ +  T FPPGE ++DC+  YLFP +  LK KA FLGYMVKCLL +
Sbjct: 345  DDFRRGNNALRYVENAIKSTTFPPGESVEDCISMYLFPNMRGLKQKARFLGYMVKCLLQT 404

Query: 1228 YTGRRKCENRDDFRNKXXXXXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRPIEHY 1407
              G RKC+NRDDFRNK               H+ HA R+M KA+QRDL GD  +RP+EHY
Sbjct: 405  SIGLRKCDNRDDFRNKRLELAGELLERELKAHVSHARRKMAKALQRDLGGDHVVRPVEHY 464

Query: 1408 LDASIITNGLSRAFSTGAWSHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVAYTGK 1587
            LDASI+TNG+SRAFSTGAW HPFKR ER +GVVA + R NPLQ   D+RKTRQQV YTGK
Sbjct: 465  LDASIVTNGVSRAFSTGAWCHPFKRMERISGVVANIGRANPLQTMIDMRKTRQQVQYTGK 524

Query: 1588 VGDARFPNPSHWGKLCFLSTPDGENCGLVKNMAATGLVSTNLVEPLLDKLLGCGMENLAD 1767
             GDAR+P+PSHWGK+CFLSTPDGENCGLVKN+A T LVS N+ EP+L KL  CG+E L D
Sbjct: 525  AGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTALVSINISEPILPKLFKCGIEELVD 584

Query: 1768 DPSLTSLKGRDKVFLNGEWVGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGEVRIF 1947
            D + TSL G+ KVFLNG+WVGIC  S  FV  LR  RRSK++P +VEIKRD+ +GEVRIF
Sbjct: 585  D-TYTSLAGKHKVFLNGDWVGICVDSHGFVTKLRRLRRSKKLPHQVEIKRDEHKGEVRIF 643

Query: 1948 SDAGRILRPLLVVENLKKINMFKGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIKYLLT 2127
            SDAGRILRPLLVV+ LKKI   KG  + FQ                  C+TAW IKYL  
Sbjct: 644  SDAGRILRPLLVVQGLKKIKAAKGEKHTFQDFLDKGIIEFIGAEEEEDCRTAWAIKYLFM 703

Query: 2128 GDKDQPSVDYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNI 2307
             ++    V YTHCELD+SFLLGLSCGIIPFANHDHARRVLYQS+KHSQQAIG+STTNPN+
Sbjct: 704  EEQGSV-VKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSQQAIGYSTTNPNL 762

Query: 2308 RVDTLSHQLYYPQRPLFRTMLSDNLGRPEYPRGHTSVLPKPEYFNGQNAIVAVNVHQGYN 2487
            RVDTLSH L+YPQRPLFRTM++D+LG+P YP GH   +PKPEYFNGQNAIVAVNVH GYN
Sbjct: 763  RVDTLSHNLHYPQRPLFRTMIADSLGKPGYPVGHNGFMPKPEYFNGQNAIVAVNVHLGYN 822

Query: 2488 QEDSLVMNQASLERGMFRTEHVRNYKAEVDNKELFETKRLKTKDRVDFGKIQSKIGRVDS 2667
            QEDS+VMN+ASLERGMFR+EH+R+YKAEV+NK   E KR K  + V+FGKIQSK GRVD+
Sbjct: 823  QEDSIVMNRASLERGMFRSEHIRSYKAEVENKLSLE-KRRKPDECVNFGKIQSKFGRVDN 881

Query: 2668 LDDDGFPFIGANLQSGDIVIGRRAESGADHSIKLKHTERGKVQKVVLSANDEGTNYAVVS 2847
            LDDDGFP +GA+LQSGDI+IGR +ESG DHSIKLKHTERG VQKVVLS+ND G N+AVVS
Sbjct: 882  LDDDGFPCVGASLQSGDIIIGRCSESGTDHSIKLKHTERGMVQKVVLSSNDAGKNFAVVS 941

Query: 2848 LRQVRLPCLGDKFSSMHGQKGVVGLLESQENFPFTREGIVPDIVINPHAFPTRQTPGQLL 3027
            LRQVR P LGDKFSSMHGQKGV+G LE QENFPFT +GIVPDIVINPHAFP+RQTPGQLL
Sbjct: 942  LRQVRSPSLGDKFSSMHGQKGVLGFLEYQENFPFTIQGIVPDIVINPHAFPSRQTPGQLL 1001

Query: 3028 EAALGKGIACVGSMRYATPFSTPSVDVITDQLHRSGYSRWGSERLYNGHNGEMMRALIFI 3207
            EAALGKGIAC GS RYATPFST SVD ITDQLHR+G+SRWG+ER+YNG  GEM+R LIF+
Sbjct: 1002 EAALGKGIACGGSKRYATPFSTLSVDDITDQLHRAGFSRWGNERVYNGRTGEMVRQLIFM 1061

Query: 3208 GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGAAANL 3387
            GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL+AHGA+ANL
Sbjct: 1062 GPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANL 1121

Query: 3388 HERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGKIRGPYCRFCDSSENIVKVNVPYGAK 3567
            HERLF LSD S M++C KC+N  NVI+R + GG KIRGPYCR CDS+++IV+VNVPYGAK
Sbjct: 1122 HERLFTLSDSSLMNVCQKCQNAANVIERKLTGGRKIRGPYCRVCDSADDIVRVNVPYGAK 1181

Query: 3568 LLCQELFSMGICAKFDTEQC 3627
            LLCQELFSMGI  KF+T  C
Sbjct: 1182 LLCQELFSMGISLKFETRLC 1201


>gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus notabilis]
          Length = 1196

 Score = 1607 bits (4160), Expect = 0.0
 Identities = 785/1161 (67%), Positives = 930/1161 (80%), Gaps = 2/1161 (0%)
 Frame = +1

Query: 151  LSEELLTKFCRQASMEFFSEYGLISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKK 330
            L E  L  FC++AS  FFSEYGLISHQI+SYN FI NG+QK+FDS G++ VEPGYDPSKK
Sbjct: 43   LGEVFLQNFCKEASTSFFSEYGLISHQINSYNDFIRNGVQKVFDSFGDLIVEPGYDPSKK 102

Query: 331  GQGEWRYAAVTFGKVTLEPPTFWSTEKPQKDSKEFLKLMPRHARLQNMTYSSRMKVEMSV 510
             Q EWRYA V FGKVTL+ P+FW      K+      L+PRHARLQNMTYSSRMKV + +
Sbjct: 103  RQNEWRYALVRFGKVTLDLPSFWGGADKDKE----YNLLPRHARLQNMTYSSRMKVNVHI 158

Query: 511  QVYTQKLMKSDKFKTGKEQFVQKHVESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDFD 690
            +VYTQKL++SDKFKTGKEQF+ K + S + +DV+IGRIPVMV+S+LCWM   +KGDC FD
Sbjct: 159  EVYTQKLVRSDKFKTGKEQFLDKEIISTEDKDVMIGRIPVMVKSDLCWMKDAEKGDCYFD 218

Query: 691  HGGYFLIKGAEKTFIAQEQICLKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESIQ 870
            HGGYF+IKGAEKTFIAQEQIC KRLW++   N +VAY+SE+KR R+ L+L      ++  
Sbjct: 219  HGGYFIIKGAEKTFIAQEQICRKRLWITSHQNLTVAYQSEVKRNRLILRLAQSGLEDTTV 278

Query: 871  GLKILNVQFLSMSIPLWILFFYLGMSSDREIIEMIDVNLDDPILVNILIATIKYADENCE 1050
               +L V FLS  IP+WILFF LG+SSD+E++++ID   DD  ++NIL  +I+ +DE C 
Sbjct: 279  EKDVLCVYFLSTEIPVWILFFALGVSSDKEVVDLIDFPTDDASILNILFPSIQISDEVCA 338

Query: 1051 GFRKEGKPLKYIDDLMSQTKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKCLLLSY 1230
            GFR++ K L +++  + +T+FPP E  ++C+D +LFP L  +  KA FLGYMVKCLL ++
Sbjct: 339  GFRRQKKALGFVEKHIKKTQFPPRESAEECLDMFLFPNLRGMLQKARFLGYMVKCLLQAF 398

Query: 1231 TGRRKCENRDDFRNKXXXXXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRPIEHYL 1410
            TGRRKC N+DDFRNK                + HA +R  KA+QRDLYGD+ LR IE YL
Sbjct: 399  TGRRKCNNKDDFRNKRLDLAGELLERELRAQVSHARKRTAKALQRDLYGDKGLRQIEFYL 458

Query: 1411 DASIITNGLSRAFSTGAWSHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVAYTGKV 1590
            DASI+TNGLSRAFSTGAW HPFK+TER +GVVA + RTNPLQ   D+RKTRQQV YTGKV
Sbjct: 459  DASIVTNGLSRAFSTGAWCHPFKKTERISGVVANVGRTNPLQTVVDMRKTRQQVQYTGKV 518

Query: 1591 GDARFPNPSHWGKLCFLSTPDGENCGLVKNMAATGLVSTNLVEPLLDKLLGCGMENLADD 1770
            GDAR+P+PSHWGK+CFLSTPDGENCGLVKN+AATGLVS N+ E L+  L   GMENLA+D
Sbjct: 519  GDARYPHPSHWGKVCFLSTPDGENCGLVKNLAATGLVSINIAESLISTLCDSGMENLAND 578

Query: 1771 PSLTSLKGRDKVFLNGEWVGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGEVRIFS 1950
             + T L  + KVFLNG+W+G+C  SL+FV  LR KRR  ++P +VEIKRD+Q GEVRIFS
Sbjct: 579  -TYTPLHEKHKVFLNGDWIGVCADSLAFVTELRRKRRRNELPHQVEIKRDEQHGEVRIFS 637

Query: 1951 DAGRILRPLLVVENLKKINMFKGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIKYLLTG 2130
            D+GRILRPLLVVENL +I   K G Y F S                 C+TAWGIKYL   
Sbjct: 638  DSGRILRPLLVVENLNRIKPSKEGKYTFHSLLDKGIIELIGAEEEEDCRTAWGIKYLFME 697

Query: 2131 DKDQPSVDYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIR 2310
            D  +P V+YTHCELD+SFLL +SCGIIPFANHDHARRVLYQ++KHSQQAIGF TTNP+IR
Sbjct: 698  DGGKP-VNYTHCELDMSFLLSVSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPDIR 756

Query: 2311 VDTLSHQLYYPQRPLFRTMLSDNLGRPEYPRGHTSVLPKPEYFNGQNAIVAVNVHQGYNQ 2490
            VDTLSHQL+YPQRPLF+TM SD LG+  Y       +PK E FNGQNAIVAVNVH GYNQ
Sbjct: 757  VDTLSHQLHYPQRPLFQTMTSDCLGKRGYAPSQNGFIPKFECFNGQNAIVAVNVHLGYNQ 816

Query: 2491 EDSLVMNQASLERGMFRTEHVRNYKAEVDNKELFETKRLKTKDRVDFGKIQSKIGRVDSL 2670
            EDS+VMN+ASLERGMFR+EH+R+YKA+VDNKE  + KR K  D  +F KI SK GRVDSL
Sbjct: 817  EDSIVMNRASLERGMFRSEHIRSYKADVDNKESTD-KRRKPDDCFNFAKIPSKNGRVDSL 875

Query: 2671 DDDGFPFIGANLQSGDIVIGRRAESGADHSIKLKHTERGKVQKVVLSANDEGTNYAVVSL 2850
            DDDGFPFIGANLQSGDIVIGR AESGADHSIKLKHTE+G VQKVVLS+ND+G N+AVVSL
Sbjct: 876  DDDGFPFIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNFAVVSL 935

Query: 2851 RQVRLPCLGDKFSSMHGQKGVVGLLESQENFPFTREGIVPDIVINPHAFPTRQTPGQLLE 3030
            RQVR P LGDKFSSMHGQKGV+G LESQENFPFT +GIVPDIVINPHAFP+RQTPGQLLE
Sbjct: 936  RQVRQPILGDKFSSMHGQKGVLGYLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLE 995

Query: 3031 AALGKGIACVGS--MRYATPFSTPSVDVITDQLHRSGYSRWGSERLYNGHNGEMMRALIF 3204
            AALGKGIA      +R+ATPFSTPSVD IT+QLH++G+SRWG+ER+YNG  GEM+R+LIF
Sbjct: 996  AALGKGIALAKGIPLRHATPFSTPSVDAITEQLHKAGFSRWGNERVYNGRTGEMVRSLIF 1055

Query: 3205 IGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGAAAN 3384
            +GPTFYQRL+HM+EDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLLAHGA+AN
Sbjct: 1056 MGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASAN 1115

Query: 3385 LHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGKIRGPYCRFCDSSENIVKVNVPYGA 3564
            LHERLF LSD SQMHIC +C N+ N+IQR++ GG K+RGPYCR C S+++IV+VNVPYGA
Sbjct: 1116 LHERLFTLSDSSQMHICHRCHNVANIIQRSLMGGRKVRGPYCRICKSADDIVRVNVPYGA 1175

Query: 3565 KLLCQELFSMGICAKFDTEQC 3627
            KLLCQELF+MGI  KF+T  C
Sbjct: 1176 KLLCQELFTMGINLKFETRIC 1196


>ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cicer
            arietinum]
          Length = 1199

 Score = 1603 bits (4150), Expect = 0.0
 Identities = 784/1161 (67%), Positives = 940/1161 (80%), Gaps = 2/1161 (0%)
 Frame = +1

Query: 151  LSEELLTKFCRQASMEFFSEYGLISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKK 330
            L ++++  FC++AS+ FF EYGLISHQI+SYN F  +G+Q  FDS G++TV PG+DPSKK
Sbjct: 47   LGDDMVRYFCKKASIMFFDEYGLISHQINSYNQFATSGLQNTFDSFGDLTVTPGFDPSKK 106

Query: 331  GQGE-WRYAAVTFGKVTLEPPTFWSTEKPQKDSKEFLKLMPRHARLQNMTYSSRMKVEMS 507
            G  E +RYA+V FGKVTL+ P FW  E   ++    +K++PRHARLQ MTY+S+MKV + 
Sbjct: 107  GDNEHYRYASVKFGKVTLDRPMFWCGEGNTQE----MKMLPRHARLQRMTYASKMKVNVQ 162

Query: 508  VQVYTQKLMKSDKFKTGKEQFVQKHVESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDF 687
            VQVY  K ++SDKFKTGKE+++ + +  ++ R++ IGR+PVMV+S+LCWMNG++KGDC+F
Sbjct: 163  VQVYIPKKVRSDKFKTGKEEYIDREIIMDENREITIGRLPVMVKSDLCWMNGVEKGDCEF 222

Query: 688  DHGGYFLIKGAEKTFIAQEQICLKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESI 867
            DHGGYFLIKGAEK FIAQEQI LKRLWV+  P W+VAY+S++KR R+ +KL++    E I
Sbjct: 223  DHGGYFLIKGAEKIFIAQEQIFLKRLWVTNVPYWAVAYKSQMKRNRMVVKLVENTTVEGI 282

Query: 868  Q-GLKILNVQFLSMSIPLWILFFYLGMSSDREIIEMIDVNLDDPILVNILIATIKYADEN 1044
            + G K+L V FLS+ IP+W+LFF LG++SD++I+++ID    D  + NIL A+I+ ADE 
Sbjct: 283  KNGEKVLTVYFLSVEIPVWLLFFALGVTSDKQIVDLIDYGEGDGRIQNILFASIREADEK 342

Query: 1045 CEGFRKEGKPLKYIDDLMSQTKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKCLLL 1224
            CE FR+    L YI++ +   +FPP E I +C++ Y+FP +  L  KA +L YMVK LLL
Sbjct: 343  CEQFRRGKNALLYIEERVKGVQFPPPESIDECLNMYVFPNIKGLNRKARYLAYMVKVLLL 402

Query: 1225 SYTGRRKCENRDDFRNKXXXXXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRPIEH 1404
            +YTGRRK +NRDDFRNK              VHI HA +RM KA+QRDLYGDR++  IEH
Sbjct: 403  AYTGRRKTDNRDDFRNKRLELAGELLERELKVHIAHARKRMAKALQRDLYGDRDVHQIEH 462

Query: 1405 YLDASIITNGLSRAFSTGAWSHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVAYTG 1584
            YLDASIITNGL RAFSTGAW+HP+KR ER +GVVATL RTNPLQ  A+LR+TRQQV YTG
Sbjct: 463  YLDASIITNGLQRAFSTGAWTHPYKRMERISGVVATLGRTNPLQTMAELRRTRQQVQYTG 522

Query: 1585 KVGDARFPNPSHWGKLCFLSTPDGENCGLVKNMAATGLVSTNLVEPLLDKLLGCGMENLA 1764
            KVGDAR+P+PSHWGK+CFLSTPDGENCGLVKNMA TGLVSTN+ E +L +L  CGME L 
Sbjct: 523  KVGDARYPHPSHWGKVCFLSTPDGENCGLVKNMAVTGLVSTNVTESILPQLFACGMEELV 582

Query: 1765 DDPSLTSLKGRDKVFLNGEWVGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGEVRI 1944
            DD +   L  +DKVFLNG+WVG+C  S SFV  LR++RR  ++P +VEIKRD  Q EVRI
Sbjct: 583  DDTTAV-LGNKDKVFLNGDWVGVCSDSASFVAELRNRRRKNELPHQVEIKRDPSQEEVRI 641

Query: 1945 FSDAGRILRPLLVVENLKKINMFKGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIKYLL 2124
             SDAGRILRPLLVV NL KI   K     FQS                 CKTAWG+ YL 
Sbjct: 642  LSDAGRILRPLLVVSNLLKIKGSKSDPKSFQSLLDNGLIELIGPEEEEDCKTAWGVPYLF 701

Query: 2125 TGDKDQPSVDYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPN 2304
             G + + SV YTHCELD+SFLLGLSC ++PFANHDHARRVLYQS+KHS QAIGFSTTNP+
Sbjct: 702  -GKEGKSSVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFSTTNPD 760

Query: 2305 IRVDTLSHQLYYPQRPLFRTMLSDNLGRPEYPRGHTSVLPKPEYFNGQNAIVAVNVHQGY 2484
            IRVD LSHQL+YPQ+PLF+TM SD LG+P Y  G + +LPK E++NGQNAIVAVNVH GY
Sbjct: 761  IRVDALSHQLFYPQKPLFQTMTSDCLGKPGY-LGPSKLLPKSEFYNGQNAIVAVNVHLGY 819

Query: 2485 NQEDSLVMNQASLERGMFRTEHVRNYKAEVDNKELFETKRLKTKDRVDFGKIQSKIGRVD 2664
            NQEDSLVMN+ASL+RGMFR+EH+R+YKAE +NKE  E KR K +D V+FGKIQSKIGRVD
Sbjct: 820  NQEDSLVMNRASLQRGMFRSEHIRSYKAENENKESTEKKR-KPEDIVNFGKIQSKIGRVD 878

Query: 2665 SLDDDGFPFIGANLQSGDIVIGRRAESGADHSIKLKHTERGKVQKVVLSANDEGTNYAVV 2844
            SLDDDGFPF+GANLQ GDI+IGR A+SGADHSIKLKHTERG VQKVVLS+NDEG N+AVV
Sbjct: 879  SLDDDGFPFVGANLQIGDIIIGRCADSGADHSIKLKHTERGYVQKVVLSSNDEGKNFAVV 938

Query: 2845 SLRQVRLPCLGDKFSSMHGQKGVVGLLESQENFPFTREGIVPDIVINPHAFPTRQTPGQL 3024
            SLRQVR P LGDKFSSMHGQKGV+G LESQENFPFT++GIVPDIVINPHAFP+RQTPGQL
Sbjct: 939  SLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQL 998

Query: 3025 LEAALGKGIACVGSMRYATPFSTPSVDVITDQLHRSGYSRWGSERLYNGHNGEMMRALIF 3204
            LEAALGKGIACVGS+R ATPFST SV+ ITDQLHR+G+SRWG+ER+YNG  GEM+R+LIF
Sbjct: 999  LEAALGKGIACVGSLRNATPFSTSSVEAITDQLHRAGFSRWGNERVYNGRTGEMVRSLIF 1058

Query: 3205 IGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGAAAN 3384
            +GPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL+AHGA+AN
Sbjct: 1059 MGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASAN 1118

Query: 3385 LHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGKIRGPYCRFCDSSENIVKVNVPYGA 3564
            L+ERLF LSD SQ+HIC KCKN+ NVI R V GG KIRGPYCRFC+S+++IV  +VPYGA
Sbjct: 1119 LYERLFTLSDSSQIHICSKCKNVANVILRPVSGGRKIRGPYCRFCESADDIVVAHVPYGA 1178

Query: 3565 KLLCQELFSMGICAKFDTEQC 3627
            KLLCQELFSMGI  KF+TE C
Sbjct: 1179 KLLCQELFSMGINLKFETELC 1199


>gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus guttatus]
          Length = 1211

 Score = 1598 bits (4137), Expect = 0.0
 Identities = 788/1166 (67%), Positives = 936/1166 (80%), Gaps = 7/1166 (0%)
 Frame = +1

Query: 151  LSEELLTKFCRQASMEFFSEYGLISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKK 330
            LSE  L   CR+AS  FF +YGLISHQI+SYN F+ +GIQK+FDS+GEI VEPGYDPSKK
Sbjct: 50   LSEGFLKVSCRKASTAFFDQYGLISHQINSYNDFVNHGIQKVFDSIGEIVVEPGYDPSKK 109

Query: 331  GQGEWRYAAVTFGKVTLEPPTFWSTEKPQK--DSKEFLKLMPRHARLQNMTYSSRMKVEM 504
            G+G+W+ A + FGKVTLE PTFW+ EK      +K++L+L+PRHARLQNMTY++++KVE 
Sbjct: 110  GEGDWKRACLKFGKVTLERPTFWTGEKFSSVDGAKDYLELLPRHARLQNMTYAAKIKVET 169

Query: 505  SVQVYTQKLMKSDKFKTGKEQFVQKHVESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCD 684
             +QVYT+ L +SDKF TG E  V+K + +E   +V  GR+PVMV+S+LCWM  L K DC+
Sbjct: 170  HLQVYTKGLNRSDKFTTGVENTVEKTLLNEYHNEVNFGRLPVMVKSDLCWMKSLDKKDCE 229

Query: 685  FDHGGYFLIKGAEKTFIAQEQICLKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNES 864
            FD GGYF+IKGAEKTFIAQEQ+CLKRLWV++ P+W+V+YR   +R RVY+KL+  P  E 
Sbjct: 230  FDQGGYFVIKGAEKTFIAQEQLCLKRLWVTKIPSWTVSYRPVARRNRVYIKLV--PKMEH 287

Query: 865  IQGL-KILNVQFLSMSIPLWILFFYLGMSSDREIIEMIDVNLDDPILVNILIATIKYADE 1041
            + G  KIL V F    I +W+LFF LG+ +D+E++++ID++++D  + NILIA+I  AD+
Sbjct: 288  VIGADKILTVYFYVTEISVWVLFFALGIPNDKEVVKLIDLDIEDSDIANILIASIYDADK 347

Query: 1042 NCEGFRKEGKPLKYIDDLMSQTKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKCLL 1221
              EGFRKEG   K+I +LM   KFPP E I+D +  YLFP L     KA FLGYMVKCLL
Sbjct: 348  KYEGFRKEGNSSKHIKELMQNCKFPPTESIEDLIKNYLFPHLKTPIQKACFLGYMVKCLL 407

Query: 1222 LSYTGRRKCENRDDFRNKXXXXXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRPIE 1401
             +Y GRRK ENRDDFRNK              VHI+HAERRM KAMQRDLY DR ++ I+
Sbjct: 408  EAYKGRRKVENRDDFRNKRLELAGELLERELRVHIKHAERRMTKAMQRDLYRDREVQSID 467

Query: 1402 HYLDASIITNGLSRAFSTGAWSHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVAYT 1581
             YLDASI+TNGLSRAFSTGAW HPFKR ERT+GVVAT+RRTNPLQ  AD+RKTRQQV+YT
Sbjct: 468  QYLDASIVTNGLSRAFSTGAWCHPFKRMERTSGVVATIRRTNPLQAIADMRKTRQQVSYT 527

Query: 1582 GKVGDARFPNPSHWGKLCFLSTPDGENCGLVKNMAATGLVSTNLVEP--LLDKLLGCGME 1755
            G+VGDAR+P+PSHWGK+CFLSTPDGENCGLVKN+A+ GLVSTNL+    LL K   CGME
Sbjct: 528  GRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGLVSTNLLAQGNLLKKFQQCGME 587

Query: 1756 NLADDPSLTSLKGRDKVFLNGEWVGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGE 1935
             + DD S   L G+ KVFL+G+W+GICK S SFV  LR KRR  +IP ++EIKRDQ  GE
Sbjct: 588  KMVDDTS-NLLGGKHKVFLDGDWIGICKDSSSFVSKLRRKRRRMEIPHQMEIKRDQHNGE 646

Query: 1936 VRIFSDAGRILRPLLVVENLKKINMFKGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIK 2115
            VRIF+D+GRILRPLLVV+NLKKI   KG  + FQS                 C+TAWG++
Sbjct: 647  VRIFNDSGRILRPLLVVQNLKKIKDLKGN-FSFQSLLDNGIIELIGAEEEEDCQTAWGVR 705

Query: 2116 YLLTGDKDQPSVDYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTT 2295
            YL T + + P V YTHCELD SFLLGLSCGI+PF NHDHARRVLYQSEKHSQQAIG+STT
Sbjct: 706  YLFTAELENPPVKYTHCELDSSFLLGLSCGIVPFTNHDHARRVLYQSEKHSQQAIGYSTT 765

Query: 2296 NPNIRVDTLSHQLYYPQRPLFRTMLSDNLGRPEYPRGHTSVLPKPEYFNGQNAIVAVNVH 2475
            N  IRVDT SH LYYPQRPLFRT+LSD+LGR  +   +  ++P+PE++NGQ AIVA+NVH
Sbjct: 766  NSIIRVDTNSHSLYYPQRPLFRTVLSDSLGRSTFSDHYKGMIPRPEFYNGQCAIVAINVH 825

Query: 2476 QGYNQEDSLVMNQASLERGMFRTEHVRNYKAEVDNKELFETKRLKTKDRVDFGKIQSKIG 2655
             GYNQEDSLVMN++SLERGMFRTEHVR++KA+V+N E    K++K  + V FGK+QSKIG
Sbjct: 826  LGYNQEDSLVMNRSSLERGMFRTEHVRSFKADVENSEAVGGKKVKMDEMVSFGKMQSKIG 885

Query: 2656 RVDSLDDDGFPFIGANLQSGDIVIGRRAESGADHSIKLKHTERGKVQKVVLSANDEGTNY 2835
            RVDSL+DDGFP+IGANLQ+GDIVIG+ A +G DHSIKLKHTE+G V KVVLSANDEG N+
Sbjct: 886  RVDSLEDDGFPYIGANLQTGDIVIGKHAATGVDHSIKLKHTEKGMVHKVVLSANDEGKNF 945

Query: 2836 AVVSLRQVRLPCLGDKFSSMHGQKGVVGLLESQENFPFTREGIVPDIVINPHAFPTRQTP 3015
            AVVSLRQVR PCLGDKFSSMHGQKGV+G LESQENFPF+++GIVPDIVINPHAFP+RQTP
Sbjct: 946  AVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFSQQGIVPDIVINPHAFPSRQTP 1005

Query: 3016 GQLLEAALGKGIACVGSMRYATPFSTPSVDVITDQLHRSGYSRWGSERLYNGHNGEMMRA 3195
            GQLLEAALGKGIA  G ++YATPFS+PSV+ IT QLHR G+SRWG ER+Y+G  GE + +
Sbjct: 1006 GQLLEAALGKGIALGGGLKYATPFSSPSVEDITAQLHRLGFSRWGGERVYDGRTGEKVNS 1065

Query: 3196 LIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGA 3375
            LIF+GPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL+AHGA
Sbjct: 1066 LIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA 1125

Query: 3376 AANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGG--KIRGPYCRFCDSSENIVKVN 3549
            AANLHERLF LSD SQMHIC KCKN+ NVIQR   GGG  KIRGP+CR C+S E++V+VN
Sbjct: 1126 AANLHERLFTLSDSSQMHICRKCKNMANVIQRPGSGGGGRKIRGPFCRVCESVEDVVRVN 1185

Query: 3550 VPYGAKLLCQELFSMGICAKFDTEQC 3627
            VPYGAKLLCQELFSMGI  KFDTE C
Sbjct: 1186 VPYGAKLLCQELFSMGISLKFDTELC 1211


>ref|NP_001054041.1| Os04g0641000 [Oryza sativa Japonica Group]
            gi|113565612|dbj|BAF15955.1| Os04g0641000, partial [Oryza
            sativa Japonica Group]
          Length = 1270

 Score = 1582 bits (4097), Expect = 0.0
 Identities = 789/1237 (63%), Positives = 944/1237 (76%), Gaps = 41/1237 (3%)
 Frame = +1

Query: 40   MMLDD--NAVTDTAEALNPSSTSKDVNKA------STSTANDD------------TCLSE 159
            MMLDD    V+ T +  N  S S DV++       + S+  DD              +S 
Sbjct: 40   MMLDDAREGVSHTLDDANGHS-SMDVDRGCHSMDTTRSSLGDDGKGKRDSYAQIPVDMSI 98

Query: 160  ELLTKFCRQASMEFFSEYGLISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKKGQG 339
              L KFC++AS  FF E GLISHQI+SYN F+ +G+Q+LFDSLGE+TVEP YDPS +G G
Sbjct: 99   PSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRGPG 158

Query: 340  EWRYAAVTFGKVTLEPPTFWSTEKPQKDSKEFLKLMPRHARLQNMTYSSRMKVEMSVQVY 519
             WR+A + FG+V LE P FWS        ++ LKL PRHARLQNMTYSS+MKVE+  QVY
Sbjct: 159  GWRHAIIKFGRVQLEEPVFWS--HGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVY 216

Query: 520  TQKLMKSDKFKTGKEQFVQKHVESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDFDHGG 699
            + +  KSDK KTG ++F  K     +   + IGR+PVMV SNLCW++ LK+ DC FD GG
Sbjct: 217  SME--KSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSGG 274

Query: 700  YFLIKGAEKTFIAQEQICLKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESIQGLK 879
            YFLIKG EK FIAQEQ CL R+WV ++P W V++ S ++RRR+Y+KLID  NNE   G K
Sbjct: 275  YFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGGK 334

Query: 880  ILNVQFLSMSIPLWILFFYLGMSSDREIIEMIDVNLDDPILVNILIATIKYADENCEGFR 1059
            I+++ FL  ++P+W++FF LG+SSD++I ++I++   D  ++N + ATIK +DE CEGFR
Sbjct: 335  IISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEGFR 394

Query: 1060 KEGKPLKYIDDLMSQTKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKCLLLSYTGR 1239
            K  K  +Y+D+L+  +KFPP EP  D + KYLFP++   + KALFLGYMVKCLL+++TG+
Sbjct: 395  KSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGK 454

Query: 1240 RKCENRDDFRNKXXXXXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRPIEHYLDAS 1419
            RKC+N+DDFRNK               HIRHAER MVKA+QRDL  +R L+  +HYLDAS
Sbjct: 455  RKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDAS 514

Query: 1420 IITNGLSRAFSTGAWSHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVAYTGKVGDA 1599
            IITNGL+RAFSTG+W HP+KR ER AG+VATLRRTNPLQM +DLRKTRQ+VAY GK GDA
Sbjct: 515  IITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDA 574

Query: 1600 RFPNPSHWGKLCFLSTPDGENCGLVKNMAATGLVSTNLVEPLLDKLLGCGMENLADDPSL 1779
            R+PNPS+WGKLCF+STPDGENCGLVKN+A T  VS+ +  PL+D+ + CGM  L + P+ 
Sbjct: 575  RYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISCGMNKLHEIPT- 633

Query: 1780 TSLKGRDKVFLNGEWVGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGEVRIFSDAG 1959
              +   DK+FLNG+WVG C    SFV+ LR  RRS  I P+VEIKRD+ Q EVR+FSDAG
Sbjct: 634  EEVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKRDKHQREVRVFSDAG 693

Query: 1960 RILRPLLVVENLKKINMFKGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIKYLLTGDKD 2139
            RILRPLLVVENL KI   KG  Y FQ                   ++AWGI+ L   +++
Sbjct: 694  RILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDIRSAWGIRNLFESEEE 753

Query: 2140 QPSVD--------------------YTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSE 2259
             P V                     YTHCELDLSFLLGLSCGIIPFANH+ ARRVLYQSE
Sbjct: 754  APMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSE 813

Query: 2260 KHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMLSDNLGRPEYPRGHTSVLPKPEYF 2439
            KHSQQAIG+STTNP+IRVDTLSHQLYYPQRPLF+T+++D +GR EY  G      +PEYF
Sbjct: 814  KHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSEYTFGRKDDFARPEYF 873

Query: 2440 NGQNAIVAVNVHQGYNQEDSLVMNQASLERGMFRTEHVRNYKAEVDNKE-LFETKRLKTK 2616
            NGQNAIVAVNVHQG+NQEDS+VMN+ASLERGMFRTEH RNYKAEV+NK      KRLK K
Sbjct: 874  NGQNAIVAVNVHQGFNQEDSVVMNRASLERGMFRTEHFRNYKAEVENKGGPGGNKRLKMK 933

Query: 2617 DRVDFGKIQSKIGRVDSLDDDGFPFIGANLQSGDIVIGRRAESGADHSIKLKHTERGKVQ 2796
            D++DFGK+QSK GRVD+LDDDG P++GA+LQSGDIVIG+ +ESG DHSIKLKHTE+G VQ
Sbjct: 934  DKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQ 993

Query: 2797 KVVLSANDEGTNYAVVSLRQVRLPCLGDKFSSMHGQKGVVGLLESQENFPFTREGIVPDI 2976
            +V+LSANDEG N+AVV+LRQVR PCLGDKFSSMHGQKGVVG LESQENFPFT +GIVPDI
Sbjct: 994  RVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTYQGIVPDI 1053

Query: 2977 VINPHAFPTRQTPGQLLEAALGKGIACVGSMRYATPFSTPSVDVITDQLHRSGYSRWGSE 3156
            VINPHAFPTRQTPGQLLEAALGKGIA  G+MRYATPF+T S DVITDQLH++G+SRWG+E
Sbjct: 1054 VINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAE 1113

Query: 3157 RLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKF 3336
             + NG  GE M +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KF
Sbjct: 1114 SVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKF 1173

Query: 3337 GEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGKIRGPYCRF 3516
            GEMERDCLLAHGAAANLHERLFMLSDFSQMH+C  C+ + NVI R VPGG KIRGPYC F
Sbjct: 1174 GEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGKKIRGPYCGF 1233

Query: 3517 CDSSENIVKVNVPYGAKLLCQELFSMGICAKFDTEQC 3627
            C SSENIV++NVPYGAKLL QELFSMGIC +F+TE C
Sbjct: 1234 CRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1270


>emb|CAE05960.2| OSJNBa0063C18.1 [Oryza sativa Japonica Group]
          Length = 1316

 Score = 1582 bits (4097), Expect = 0.0
 Identities = 789/1237 (63%), Positives = 944/1237 (76%), Gaps = 41/1237 (3%)
 Frame = +1

Query: 40   MMLDD--NAVTDTAEALNPSSTSKDVNKA------STSTANDD------------TCLSE 159
            MMLDD    V+ T +  N  S S DV++       + S+  DD              +S 
Sbjct: 86   MMLDDAREGVSHTLDDANGHS-SMDVDRGCHSMDTTRSSLGDDGKGKRDSYAQIPVDMSI 144

Query: 160  ELLTKFCRQASMEFFSEYGLISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKKGQG 339
              L KFC++AS  FF E GLISHQI+SYN F+ +G+Q+LFDSLGE+TVEP YDPS +G G
Sbjct: 145  PSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRGPG 204

Query: 340  EWRYAAVTFGKVTLEPPTFWSTEKPQKDSKEFLKLMPRHARLQNMTYSSRMKVEMSVQVY 519
             WR+A + FG+V LE P FWS        ++ LKL PRHARLQNMTYSS+MKVE+  QVY
Sbjct: 205  GWRHAIIKFGRVQLEEPVFWS--HGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVY 262

Query: 520  TQKLMKSDKFKTGKEQFVQKHVESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDFDHGG 699
            + +  KSDK KTG ++F  K     +   + IGR+PVMV SNLCW++ LK+ DC FD GG
Sbjct: 263  SME--KSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSGG 320

Query: 700  YFLIKGAEKTFIAQEQICLKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESIQGLK 879
            YFLIKG EK FIAQEQ CL R+WV ++P W V++ S ++RRR+Y+KLID  NNE   G K
Sbjct: 321  YFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGGK 380

Query: 880  ILNVQFLSMSIPLWILFFYLGMSSDREIIEMIDVNLDDPILVNILIATIKYADENCEGFR 1059
            I+++ FL  ++P+W++FF LG+SSD++I ++I++   D  ++N + ATIK +DE CEGFR
Sbjct: 381  IISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEGFR 440

Query: 1060 KEGKPLKYIDDLMSQTKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKCLLLSYTGR 1239
            K  K  +Y+D+L+  +KFPP EP  D + KYLFP++   + KALFLGYMVKCLL+++TG+
Sbjct: 441  KSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGK 500

Query: 1240 RKCENRDDFRNKXXXXXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRPIEHYLDAS 1419
            RKC+N+DDFRNK               HIRHAER MVKA+QRDL  +R L+  +HYLDAS
Sbjct: 501  RKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDAS 560

Query: 1420 IITNGLSRAFSTGAWSHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVAYTGKVGDA 1599
            IITNGL+RAFSTG+W HP+KR ER AG+VATLRRTNPLQM +DLRKTRQ+VAY GK GDA
Sbjct: 561  IITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDA 620

Query: 1600 RFPNPSHWGKLCFLSTPDGENCGLVKNMAATGLVSTNLVEPLLDKLLGCGMENLADDPSL 1779
            R+PNPS+WGKLCF+STPDGENCGLVKN+A T  VS+ +  PL+D+ + CGM  L + P+ 
Sbjct: 621  RYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISCGMNKLHEIPT- 679

Query: 1780 TSLKGRDKVFLNGEWVGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGEVRIFSDAG 1959
              +   DK+FLNG+WVG C    SFV+ LR  RRS  I P+VEIKRD+ Q EVR+FSDAG
Sbjct: 680  EEVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKRDKHQREVRVFSDAG 739

Query: 1960 RILRPLLVVENLKKINMFKGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIKYLLTGDKD 2139
            RILRPLLVVENL KI   KG  Y FQ                   ++AWGI+ L   +++
Sbjct: 740  RILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDIRSAWGIRNLFESEEE 799

Query: 2140 QPSVD--------------------YTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSE 2259
             P V                     YTHCELDLSFLLGLSCGIIPFANH+ ARRVLYQSE
Sbjct: 800  APMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSE 859

Query: 2260 KHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMLSDNLGRPEYPRGHTSVLPKPEYF 2439
            KHSQQAIG+STTNP+IRVDTLSHQLYYPQRPLF+T+++D +GR EY  G      +PEYF
Sbjct: 860  KHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSEYTFGRKDDFARPEYF 919

Query: 2440 NGQNAIVAVNVHQGYNQEDSLVMNQASLERGMFRTEHVRNYKAEVDNKE-LFETKRLKTK 2616
            NGQNAIVAVNVHQG+NQEDS+VMN+ASLERGMFRTEH RNYKAEV+NK      KRLK K
Sbjct: 920  NGQNAIVAVNVHQGFNQEDSVVMNRASLERGMFRTEHFRNYKAEVENKGGPGGNKRLKMK 979

Query: 2617 DRVDFGKIQSKIGRVDSLDDDGFPFIGANLQSGDIVIGRRAESGADHSIKLKHTERGKVQ 2796
            D++DFGK+QSK GRVD+LDDDG P++GA+LQSGDIVIG+ +ESG DHSIKLKHTE+G VQ
Sbjct: 980  DKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQ 1039

Query: 2797 KVVLSANDEGTNYAVVSLRQVRLPCLGDKFSSMHGQKGVVGLLESQENFPFTREGIVPDI 2976
            +V+LSANDEG N+AVV+LRQVR PCLGDKFSSMHGQKGVVG LESQENFPFT +GIVPDI
Sbjct: 1040 RVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTYQGIVPDI 1099

Query: 2977 VINPHAFPTRQTPGQLLEAALGKGIACVGSMRYATPFSTPSVDVITDQLHRSGYSRWGSE 3156
            VINPHAFPTRQTPGQLLEAALGKGIA  G+MRYATPF+T S DVITDQLH++G+SRWG+E
Sbjct: 1100 VINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAE 1159

Query: 3157 RLYNGHNGEMMRALIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKF 3336
             + NG  GE M +LIF+GPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KF
Sbjct: 1160 SVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKF 1219

Query: 3337 GEMERDCLLAHGAAANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGKIRGPYCRF 3516
            GEMERDCLLAHGAAANLHERLFMLSDFSQMH+C  C+ + NVI R VPGG KIRGPYC F
Sbjct: 1220 GEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGKKIRGPYCGF 1279

Query: 3517 CDSSENIVKVNVPYGAKLLCQELFSMGICAKFDTEQC 3627
            C SSENIV++NVPYGAKLL QELFSMGIC +F+TE C
Sbjct: 1280 CRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1316


>ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Glycine max]
          Length = 1205

 Score = 1581 bits (4093), Expect = 0.0
 Identities = 764/1164 (65%), Positives = 940/1164 (80%), Gaps = 5/1164 (0%)
 Frame = +1

Query: 151  LSEELLTKFCRQASMEFFSEYGLISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKK 330
            L E+++  +C++ASM FF EYGLISHQI+S+N F+  G+Q  FDS G++ V PG+DPSKK
Sbjct: 49   LGEDMVKYWCKKASMLFFDEYGLISHQINSFNHFVAIGLQNTFDSFGDLVVTPGFDPSKK 108

Query: 331  GQGE-WRYAAVTFGKVTLEPPTFWSTEKPQKDSKEFLKLMPRHARLQNMTYSSRMKVEMS 507
            G+ E +RYA+V FGKV L+ P FW  E    +++EF K++PRHAR+Q MTY+S++K+++ 
Sbjct: 109  GENEHFRYASVKFGKVKLDKPMFWGGEG---NAQEF-KMLPRHARIQRMTYASKVKIQVK 164

Query: 508  VQVYTQKLMKSDKFKTGKEQFVQKHVESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDF 687
            VQVY  K ++SDKFKTGKE+F+ + +  ED+R+++IGR+PVMV+S+LCWM   +K D +F
Sbjct: 165  VQVYVPKKVRSDKFKTGKEEFLDREIMKEDEREIIIGRLPVMVKSDLCWMKDAEKDDDEF 224

Query: 688  DHGGYFLIKGAEKTFIAQEQICLKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESI 867
            DHGGYF++KGAEKTFIAQEQ+ LKRLWV   P W +AY+S++KR R+ +KL+    +E +
Sbjct: 225  DHGGYFIVKGAEKTFIAQEQLYLKRLWVMNSPGWMIAYKSQMKRNRMVIKLVGNSRSEEV 284

Query: 868  Q-GLKILNVQFLSMSIPLWILFFYLGMSSDREIIEMIDVNLDDPILVNILIATIKYADEN 1044
            + G   L V FLS+ +P+W+LFF LG+SSD+EI+++I    DD  + NIL A+++ ADE 
Sbjct: 285  ENGDMCLTVYFLSVEVPVWVLFFALGVSSDKEIVDLIGCGNDDVRIQNILFASVRDADEK 344

Query: 1045 CEGFRKEGKPLKYIDDLMSQTKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKCLLL 1224
            C  FR+    ++Y++  +   +FPP E +++C++ Y+FP +  L  KA FL YMVK LLL
Sbjct: 345  CGAFRRVRNAVQYLEKCVKSVQFPPSESMQECLEMYVFPGISGLNRKARFLAYMVKGLLL 404

Query: 1225 SYTGRRKCENRDDFRNKXXXXXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRPIEH 1404
            +YTGRRKC+NRDDFRNK              VH+ HA +RM KA+QRDLYGDR++RPIEH
Sbjct: 405  AYTGRRKCDNRDDFRNKRLELASELLDRELKVHVAHARKRMAKALQRDLYGDRDVRPIEH 464

Query: 1405 YLDASIITNGLSRAFSTGAWSHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVAYTG 1584
            YLDASIITNGL RAFSTGAWSHP+KR ER +GVVA + RTNPLQ  A+LR+ RQQV YTG
Sbjct: 465  YLDASIITNGLQRAFSTGAWSHPYKRMERISGVVANVGRTNPLQTMAELRRARQQVQYTG 524

Query: 1585 KVGDARFPNPSHWGKLCFLSTPDGENCGLVKNMAATGLVSTNLV---EPLLDKLLGCGME 1755
            KVGDAR+P+PSHWGK+CFL+TPDGENCGLVKN++ TGLVST++    E +L KL+ CGM+
Sbjct: 525  KVGDARYPHPSHWGKVCFLTTPDGENCGLVKNLSVTGLVSTDVTDVTESILLKLVDCGMQ 584

Query: 1756 NLADDPSLTSLKGRDKVFLNGEWVGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGE 1935
             L DD S T L   DKV LNG+WVG+C  S SFV  LRS+RR  ++P +VEIKRDQ Q E
Sbjct: 585  ELVDDTS-THLGSMDKVLLNGDWVGVCPDSSSFVAELRSRRRRNELPHQVEIKRDQSQHE 643

Query: 1936 VRIFSDAGRILRPLLVVENLKKINMFKGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIK 2115
            VRI+SDAGRILRPLLVV NL KI  FK   Y FQS                 C TAWG++
Sbjct: 644  VRIYSDAGRILRPLLVVGNLLKIKGFKSDRYSFQSLLDKGVIELIGPEEEEDCCTAWGVE 703

Query: 2116 YLLTGDKDQPSVDYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTT 2295
            YL  G + + SV YTHCELD+SFLLGLSC ++PFANHDHARRVLYQS+KHS QAIGFSTT
Sbjct: 704  YLF-GKEGKRSVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFSTT 762

Query: 2296 NPNIRVDTLSHQLYYPQRPLFRTMLSDNLGRPEYPRGHTSVLPKPEYFNGQNAIVAVNVH 2475
            NPNIRVDTLSHQL+YPQ+PLFRTM SD LG+P++  G + + PK E++NGQNAIVAVNVH
Sbjct: 763  NPNIRVDTLSHQLHYPQKPLFRTMTSDCLGKPDHSLGQSKIPPKAEFYNGQNAIVAVNVH 822

Query: 2476 QGYNQEDSLVMNQASLERGMFRTEHVRNYKAEVDNKELFETKRLKTKDRVDFGKIQSKIG 2655
             GYNQEDSLVMN+ASL+RGMFR+EH+R+YK+E+DNKE  + KR K +D V+F K+QSKIG
Sbjct: 823  LGYNQEDSLVMNRASLQRGMFRSEHIRSYKSEIDNKESSDKKR-KPEDIVNFAKLQSKIG 881

Query: 2656 RVDSLDDDGFPFIGANLQSGDIVIGRRAESGADHSIKLKHTERGKVQKVVLSANDEGTNY 2835
            RVDSLDDDGFP++GANLQSGDI+IG+ AESGAD+S+KLKHTERG VQKVVLS+NDEG N+
Sbjct: 882  RVDSLDDDGFPYVGANLQSGDIIIGKCAESGADNSVKLKHTERGYVQKVVLSSNDEGKNF 941

Query: 2836 AVVSLRQVRLPCLGDKFSSMHGQKGVVGLLESQENFPFTREGIVPDIVINPHAFPTRQTP 3015
            AVVSLRQVR P LGDKFSSMHGQKGV+G LESQENFPFTR+GIVPDIVINPHAFP+RQTP
Sbjct: 942  AVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHAFPSRQTP 1001

Query: 3016 GQLLEAALGKGIACVGSMRYATPFSTPSVDVITDQLHRSGYSRWGSERLYNGHNGEMMRA 3195
            GQLLEAALGKGIAC G ++ ATPFSTPSVD IT+QLHR+G+SRWG+ER+YNG  GEM+R+
Sbjct: 1002 GQLLEAALGKGIACGGILKQATPFSTPSVDAITEQLHRAGFSRWGNERVYNGRTGEMVRS 1061

Query: 3196 LIFIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGA 3375
            LIF+GPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL+AHGA
Sbjct: 1062 LIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA 1121

Query: 3376 AANLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGKIRGPYCRFCDSSENIVKVNVP 3555
            +ANL+ERLF LSD SQ+HIC KCK + NVI R V GG KIRGPYCR C+S+++IV  +VP
Sbjct: 1122 SANLYERLFTLSDSSQIHICSKCKKVANVILRPVSGGRKIRGPYCRHCESADDIVVAHVP 1181

Query: 3556 YGAKLLCQELFSMGICAKFDTEQC 3627
            YGAKLLCQELFSMGI  KF+T+ C
Sbjct: 1182 YGAKLLCQELFSMGINLKFETQLC 1205


>ref|XP_007136942.1| hypothetical protein PHAVU_009G087100g [Phaseolus vulgaris]
            gi|561010029|gb|ESW08936.1| hypothetical protein
            PHAVU_009G087100g [Phaseolus vulgaris]
          Length = 1202

 Score = 1577 bits (4084), Expect = 0.0
 Identities = 768/1162 (66%), Positives = 934/1162 (80%), Gaps = 5/1162 (0%)
 Frame = +1

Query: 157  EELLTKFCRQASMEFFSEYGLISHQISSYNSFIENGIQKLFDSLGEITVEPGYDPSKKGQ 336
            EE     C++ SM FF EYGLISHQI+SYN +   G+Q+ FD  GE+ V PG+DPSKKG 
Sbjct: 49   EEAFRYHCKKFSMLFFEEYGLISHQINSYNHYANVGLQRTFDGFGELVVTPGFDPSKKGA 108

Query: 337  GE-WRYAAVTFGKVTLEPPTFWSTEKPQKDSKEFLKLMPRHARLQNMTYSSRMKVEMSVQ 513
             E +RYA+V FGKVTL+ P FW  E    +++EF K++PRHARLQ MTY+S++K+ + VQ
Sbjct: 109  NEHYRYASVKFGKVTLDKPMFWGGEG---NAQEF-KMLPRHARLQRMTYASKIKILVKVQ 164

Query: 514  VYTQKLMKSDKFKTGKEQFVQKHVESEDKRDVLIGRIPVMVRSNLCWMNGLKKGDCDFDH 693
            VY  K ++SDKFKTGKE+++ K +  ED+R+++IGR+PVMV+S+LCWMNG +K DC+FDH
Sbjct: 165  VYVPKKVRSDKFKTGKEEYLDKEILKEDEREMIIGRLPVMVKSDLCWMNG-EKDDCEFDH 223

Query: 694  GGYFLIKGAEKTFIAQEQICLKRLWVSEKPNWSVAYRSELKRRRVYLKLIDLPNNESIQ- 870
            GGYFLIKGAEKTFIAQEQ+ LKRLWV   P W +AY+S++KR R+ +KL+    NE  Q 
Sbjct: 224  GGYFLIKGAEKTFIAQEQLYLKRLWVMNSPGWMIAYKSQMKRNRMVIKLVGNSRNEEGQN 283

Query: 871  GLKILNVQFLSMSIPLWILFFYLGMSSDREIIEMIDVNLDDPILVNILIATIKYADENCE 1050
            G   L V FLS+ +P+W+LFF LG++SD++++++I  + DD  + NIL+A++  ADE C 
Sbjct: 284  GDMFLTVYFLSVEVPVWVLFFALGVTSDKDVVDLIGCDNDDARIQNILLASVCDADEKCG 343

Query: 1051 GFRKEGKPLKYIDDLMSQTKFPPGEPIKDCMDKYLFPTLHDLKLKALFLGYMVKCLLLSY 1230
             FR+    ++Y++  +   +FPP E I++C++ Y+FP +  L  KA FL YMVK LLL+Y
Sbjct: 344  AFRRGRNAVQYLEKYIKSVQFPPPESIEECLEMYVFPGISGLNRKARFLAYMVKGLLLAY 403

Query: 1231 TGRRKCENRDDFRNKXXXXXXXXXXXXXXVHIRHAERRMVKAMQRDLYGDRNLRPIEHYL 1410
            TGRRKC+NRDDFRNK              VHI HA +RM KA+QRDLYG+R++RPIEHYL
Sbjct: 404  TGRRKCDNRDDFRNKRLELASELLDRELKVHIAHARKRMSKALQRDLYGERDVRPIEHYL 463

Query: 1411 DASIITNGLSRAFSTGAWSHPFKRTERTAGVVATLRRTNPLQMTADLRKTRQQVAYTGKV 1590
            DASIITNGL RAFSTGAWSHP+KR ER +GVVA + RTNPLQ  A+LR+ RQQV YTGKV
Sbjct: 464  DASIITNGLQRAFSTGAWSHPYKRMERISGVVANVGRTNPLQTMAELRRARQQVQYTGKV 523

Query: 1591 GDARFPNPSHWGKLCFLSTPDGENCGLVKNMAATGLVST---NLVEPLLDKLLGCGMENL 1761
            GDAR+P+PSHWGK+CFLSTPDGENCGLVKNMA TGLVST   N  E +L  LL CGME L
Sbjct: 524  GDARYPHPSHWGKVCFLSTPDGENCGLVKNMAVTGLVSTDVSNASESILPTLLNCGMEEL 583

Query: 1762 ADDPSLTSLKGRDKVFLNGEWVGICKGSLSFVMNLRSKRRSKQIPPEVEIKRDQQQGEVR 1941
             +D + T +  +DKVFLNG+WVG+C  S  FV  LRS+RR  ++P +VEIKRDQ Q EVR
Sbjct: 584  VNDTT-THMGNKDKVFLNGDWVGVCPDSSWFVAELRSERRKNKLPHQVEIKRDQSQHEVR 642

Query: 1942 IFSDAGRILRPLLVVENLKKINMFKGGGYMFQSXXXXXXXXXXXXXXXXXCKTAWGIKYL 2121
            I+SDAGRILRPLLVV NL +I  FK   Y F++                 C TAWG++YL
Sbjct: 643  IYSDAGRILRPLLVVGNLLRIKRFKSDRYSFRTLLEEGVIELIGPEEEEDCCTAWGVQYL 702

Query: 2122 LTGDKDQPSVDYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTNP 2301
              G + + SV YTHCELD+SFLLGLSC ++PFANHDHARRVLYQS+KHS QAIGFST NP
Sbjct: 703  F-GKEGKRSVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFSTLNP 761

Query: 2302 NIRVDTLSHQLYYPQRPLFRTMLSDNLGRPEYPRGHTSVLPKPEYFNGQNAIVAVNVHQG 2481
            N R+DTLSHQL+YPQRPLF+TM SD LG+P  P G + + PK E++NGQNAIVAVNVH G
Sbjct: 762  NTRIDTLSHQLHYPQRPLFQTMASDCLGKPTSPLGQSKIHPKAEFYNGQNAIVAVNVHLG 821

Query: 2482 YNQEDSLVMNQASLERGMFRTEHVRNYKAEVDNKELFETKRLKTKDRVDFGKIQSKIGRV 2661
            YNQEDSLVMN+ASL+RGMFR+EH+R+YK+E+DNK+  E KR K++D V+FGK+QSKIGRV
Sbjct: 822  YNQEDSLVMNRASLQRGMFRSEHIRSYKSEIDNKQSSEKKR-KSEDIVNFGKLQSKIGRV 880

Query: 2662 DSLDDDGFPFIGANLQSGDIVIGRRAESGADHSIKLKHTERGKVQKVVLSANDEGTNYAV 2841
            DSLDDDGFP++GANLQSGDI+IGR AESGAD+S+KLKHTERG VQKVVLS+NDEG N+A 
Sbjct: 881  DSLDDDGFPYVGANLQSGDIIIGRCAESGADNSVKLKHTERGYVQKVVLSSNDEGKNFAA 940

Query: 2842 VSLRQVRLPCLGDKFSSMHGQKGVVGLLESQENFPFTREGIVPDIVINPHAFPTRQTPGQ 3021
            VSLRQVR P LGDKFSSMHGQKGV+G LE QENFPFTR+GIVPDIVINPHAFP+RQTPGQ
Sbjct: 941  VSLRQVRSPVLGDKFSSMHGQKGVLGFLECQENFPFTRQGIVPDIVINPHAFPSRQTPGQ 1000

Query: 3022 LLEAALGKGIACVGSMRYATPFSTPSVDVITDQLHRSGYSRWGSERLYNGHNGEMMRALI 3201
            LLEAALGKGIAC G +R+ATPFSTPSVD ITDQLHR+G+SRWG+ER+YNG  GEM+R+LI
Sbjct: 1001 LLEAALGKGIACGGKLRHATPFSTPSVDAITDQLHRAGFSRWGNERVYNGRTGEMVRSLI 1060

Query: 3202 FIGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGAAA 3381
            F+GPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL+AHGA+A
Sbjct: 1061 FMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASA 1120

Query: 3382 NLHERLFMLSDFSQMHICGKCKNITNVIQRAVPGGGKIRGPYCRFCDSSENIVKVNVPYG 3561
            NL+ERLF LSD SQ+HIC  CKN++NVI R V GG K+RGPYCR C+S+++IV  +VPYG
Sbjct: 1121 NLYERLFTLSDSSQIHICSGCKNVSNVIMRPVSGGRKVRGPYCRHCESADDIVVAHVPYG 1180

Query: 3562 AKLLCQELFSMGICAKFDTEQC 3627
            AKLLCQELFSMGI  KF+T+ C
Sbjct: 1181 AKLLCQELFSMGINLKFETQLC 1202