BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00007233
         (3759 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...  1810   0.0  
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob...  1802   0.0  
ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theob...  1788   0.0  
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...  1788   0.0  
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s...  1787   0.0  
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s...  1753   0.0  
ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III s...  1748   0.0  
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...  1738   0.0  
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...  1731   0.0  
ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III s...  1697   0.0  
ref|XP_006279912.1| hypothetical protein CARUB_v10025768mg [Caps...  1686   0.0  
ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutr...  1677   0.0  
ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phas...  1674   0.0  
ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III s...  1672   0.0  
ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arab...  1669   0.0  
ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s...  1669   0.0  
ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III s...  1667   0.0  
ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III s...  1667   0.0  
ref|NP_199327.4| DNA-directed RNA polymerase RPC2 [Arabidopsis t...  1667   0.0  
dbj|BAB11387.1| DNA-directed RNA polymerase subunit [Arabidopsis...  1665   0.0  

>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score = 1810 bits (4689), Expect = 0.0
 Identities = 899/1102 (81%), Positives = 992/1102 (90%), Gaps = 4/1102 (0%)
 Frame = -3

Query: 3637 SIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDV 3458
            SI K F + PVK  VDKF LLPEFLKVRGLVKQHLDSFNYFV T IKKIV AN+ I S V
Sbjct: 5    SIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSSV 64

Query: 3457 DPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVM 3278
            DP +YL++KDVRIGEPSIT D  +  L PH CRLSD TYAAPI+V+IEY  GSH +K  +
Sbjct: 65   DPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQKTRV 124

Query: 3277 TKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 3098
             KN++VIGRMPIMLRSC CVL +KDE ELARLGECPLDPGGYFVVKGTEKVILIQEQLSK
Sbjct: 125  EKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 184

Query: 3097 NRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGME 2918
            NRIII++DKKG + ASVTSSTE+TKSKTVIVM+KEKI+LQLN FT+ IPIM++MKAMGME
Sbjct: 185  NRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMGME 244

Query: 2917 SDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPR 2738
            SDQEVVQMVGR+PRY ALLLPS++ECA+  IYTQ+QALEFLE+KVK+  F N SLEKE R
Sbjct: 245  SDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLEKEGR 304

Query: 2737 AMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQ 2558
             M ILRD F+ANVPVRQ NFRPKC+YVAVMLRRMM+AILNKDAMDDKDYVGNKRLELSGQ
Sbjct: 305  GMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSGQ 364

Query: 2557 LISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAH---YLMRDIITHGLERAISTGN 2387
            LISLLFEDLFKTM SE+KK  D  LAKPSRSSR D +    +++RD IT GLER +STGN
Sbjct: 365  LISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLSTGN 424

Query: 2386 WDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD 2207
            WD+KRF+MHRKGM+QV+ARLS+I +LGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD
Sbjct: 425  WDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD 484

Query: 2206 TPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNG 2027
            TPEGEACGLVKNLALMTHVTTDE+E+PLISLCYSLGVEDLELLSGEELHT NSFL+IFNG
Sbjct: 485  TPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLIIFNG 544

Query: 2026 LILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGI 1847
            LILGKHRRP+ FA A+RKLRRAGKIGEFVSVFVNEKQ CVYIASDGGRVCRP+VIADKG 
Sbjct: 545  LILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIADKGK 604

Query: 1846 SRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFT 1667
            SRIKEHHMKEL DGVRTF+DFLR+GL+EYLDVNE+NNALIALYE +A+PETTHIEIEPFT
Sbjct: 605  SRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIEIEPFT 664

Query: 1666 ILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTR 1487
            ILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+L+Y+LVYPQRPLLTTR
Sbjct: 665  ILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTTR 724

Query: 1486 TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYA 1307
            TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK SA+NQ+Y 
Sbjct: 725  TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVNQRYE 784

Query: 1306 NNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSL 1127
            NN SDRI+RP +VG +AERMQILDDDGLA+PGEII+P+DIYINK+SPI T+  + S + L
Sbjct: 785  NNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLISPVGL 844

Query: 1126 PDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQK 947
            PDSAYK + QT+KGP+GE +VVDRVAL SDK++NLC KF+IRHTRRPE+GDKFSSRHGQK
Sbjct: 845  PDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRHGQK 904

Query: 946  GVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAF 767
            GVCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAF
Sbjct: 905  GVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAF 964

Query: 766  GEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDK 587
            GEPSGHAD+VE IS+TLVK GFSYSGKDF+YSG  G PLQAYIFMGPIYYQKLKHMVLDK
Sbjct: 965  GEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDK 1024

Query: 586  MHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQE 407
            MHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLM+SSDPFEVQ 
Sbjct: 1025 MHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQ- 1083

Query: 406  DISTISSKLAFVPH-AKMGITS 344
             +  +   L +  H  K+GI S
Sbjct: 1084 -VCRVCGLLGYYNHKLKIGICS 1104



 Score =  103 bits (256), Expect = 8e-19
 Identities = 47/51 (92%), Positives = 50/51 (98%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY+NHKLK GICSTCKNGDNISTM+LPYACKLLFQELQ+MNVVPRLKLTEA
Sbjct: 1092 GYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLTEA 1142


>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1158

 Score = 1802 bits (4668), Expect = 0.0
 Identities = 895/1088 (82%), Positives = 979/1088 (89%), Gaps = 1/1088 (0%)
 Frame = -3

Query: 3670 NNQSMGSSGEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI 3491
            NN +  +  E  +DKQ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI
Sbjct: 12   NNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI 71

Query: 3490 VAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEY 3311
            V AN+ I S VDP +YL++KDVRIGEPS+T +  +  + PH CRLSD TYAAPI V+IEY
Sbjct: 72   VRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEY 131

Query: 3310 TNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTE 3131
              GSH +K  + KN++VIGRMPIMLRSC CVL  KDE ELARLGECPLDPGGYFV+KG E
Sbjct: 132  IQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAE 191

Query: 3130 KVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIP 2951
            KVILIQEQLSKNRIII++DKKG + ASVTSS+EATKSKTVI M+KEKIYL LN F   IP
Sbjct: 192  KVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIP 251

Query: 2950 IMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFT 2771
            IMV+MKAMGMESDQEVVQMVGRDP Y A+LLPSI+ECA   IYTQEQALE+LE KVKR  
Sbjct: 252  IMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVM 311

Query: 2770 FSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDY 2591
            ++  + EKE RA+ ILRDVF+ANVPVR  NFRPKC+YVAVMLRRM+EAILNKDAMDDKDY
Sbjct: 312  YTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDY 371

Query: 2590 VGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLM-RDIITHG 2414
            VGNKRLELSGQLISLLFEDLFKT  SE++K  DL L+KPSRSS LD + +L  R+ IT G
Sbjct: 372  VGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFG 431

Query: 2413 LERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPS 2234
            LER +STGN+D+KRFKMHRKGMTQVLARLSFI TLG+MTK+SPQFEKSRKVSGPRALQPS
Sbjct: 432  LERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPS 491

Query: 2233 QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTS 2054
            QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE PLISLCY LGVEDLELLSGEELHT 
Sbjct: 492  QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTP 551

Query: 2053 NSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCR 1874
            NSFLVI NGLILGKHRRP+HFA AMRKLRRAGK+GEFVSVFVNEKQ CVYIASDGGRVCR
Sbjct: 552  NSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCR 611

Query: 1873 PLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPET 1694
            PLVIADKG+SRIKEHHMKEL DGVRTF+DFLR+GL+EYLDVNE+NNALIALYEGEA PET
Sbjct: 612  PLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPET 671

Query: 1693 THIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVY 1514
            THIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y+LVY
Sbjct: 672  THIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVY 731

Query: 1513 PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK 1334
            PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+
Sbjct: 732  PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKR 791

Query: 1333 LSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTR 1154
             SA+NQKY    SDRI+RPQR G  +ERMQILDDDG+A+PGEIIRP+DIYINK+S I+TR
Sbjct: 792  YSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTR 851

Query: 1153 DTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGD 974
             +  SS SLPDSAY+ A QTYKGP+GE+ VVDRVAL +D+++NL  KF+IRHTRRPE+GD
Sbjct: 852  GSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGD 911

Query: 973  KFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSS 794
            KFSSRHGQKGVCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS 
Sbjct: 912  KFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSC 971

Query: 793  GRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQ 614
            GRFHYGSAFGEPSGHADRVEAISETL+K GFSY+GKDF+YSG  G PLQAYIFMGPIYYQ
Sbjct: 972  GRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQ 1031

Query: 613  KLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMI 434
            KLKHMVLDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMI
Sbjct: 1032 KLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMI 1091

Query: 433  SSDPFEVQ 410
            SSDPFEVQ
Sbjct: 1092 SSDPFEVQ 1099



 Score = 98.6 bits (244), Expect = 2e-17
 Identities = 43/51 (84%), Positives = 50/51 (98%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY++HKLKTGICS+CKNGDN+STM+LPYACKLL QELQSMN+VPRLKL+EA
Sbjct: 1108 GYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLSEA 1158


>ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
            gi|508727714|gb|EOY19611.1| DNA-directed RNA polymerase
            isoform 3 [Theobroma cacao]
          Length = 1153

 Score = 1788 bits (4631), Expect = 0.0
 Identities = 890/1088 (81%), Positives = 974/1088 (89%), Gaps = 1/1088 (0%)
 Frame = -3

Query: 3670 NNQSMGSSGEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI 3491
            NN +  +  E  +DKQ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI
Sbjct: 12   NNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI 71

Query: 3490 VAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEY 3311
            V AN+ I S VDP +YL++KDVRIGEPS+T +  +  + PH CRLSD TYAAPI V+IEY
Sbjct: 72   VRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEY 131

Query: 3310 TNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTE 3131
              GSH +K  + KN++VIGRMPIMLRSC CVL  KDE ELARLGECPLDPGGYFV+KG E
Sbjct: 132  IQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAE 191

Query: 3130 KVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIP 2951
            K     EQLSKNRIII++DKKG + ASVTSS+EATKSKTVI M+KEKIYL LN F   IP
Sbjct: 192  K-----EQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIP 246

Query: 2950 IMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFT 2771
            IMV+MKAMGMESDQEVVQMVGRDP Y A+LLPSI+ECA   IYTQEQALE+LE KVKR  
Sbjct: 247  IMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVM 306

Query: 2770 FSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDY 2591
            ++  + EKE RA+ ILRDVF+ANVPVR  NFRPKC+YVAVMLRRM+EAILNKDAMDDKDY
Sbjct: 307  YTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDY 366

Query: 2590 VGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLM-RDIITHG 2414
            VGNKRLELSGQLISLLFEDLFKT  SE++K  DL L+KPSRSS LD + +L  R+ IT G
Sbjct: 367  VGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFG 426

Query: 2413 LERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPS 2234
            LER +STGN+D+KRFKMHRKGMTQVLARLSFI TLG+MTK+SPQFEKSRKVSGPRALQPS
Sbjct: 427  LERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPS 486

Query: 2233 QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTS 2054
            QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE PLISLCY LGVEDLELLSGEELHT 
Sbjct: 487  QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTP 546

Query: 2053 NSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCR 1874
            NSFLVI NGLILGKHRRP+HFA AMRKLRRAGK+GEFVSVFVNEKQ CVYIASDGGRVCR
Sbjct: 547  NSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCR 606

Query: 1873 PLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPET 1694
            PLVIADKG+SRIKEHHMKEL DGVRTF+DFLR+GL+EYLDVNE+NNALIALYEGEA PET
Sbjct: 607  PLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPET 666

Query: 1693 THIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVY 1514
            THIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y+LVY
Sbjct: 667  THIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVY 726

Query: 1513 PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK 1334
            PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+
Sbjct: 727  PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKR 786

Query: 1333 LSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTR 1154
             SA+NQKY    SDRI+RPQR G  +ERMQILDDDG+A+PGEIIRP+DIYINK+S I+TR
Sbjct: 787  YSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTR 846

Query: 1153 DTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGD 974
             +  SS SLPDSAY+ A QTYKGP+GE+ VVDRVAL +D+++NL  KF+IRHTRRPE+GD
Sbjct: 847  GSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGD 906

Query: 973  KFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSS 794
            KFSSRHGQKGVCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS 
Sbjct: 907  KFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSC 966

Query: 793  GRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQ 614
            GRFHYGSAFGEPSGHADRVEAISETL+K GFSY+GKDF+YSG  G PLQAYIFMGPIYYQ
Sbjct: 967  GRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQ 1026

Query: 613  KLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMI 434
            KLKHMVLDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMI
Sbjct: 1027 KLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMI 1086

Query: 433  SSDPFEVQ 410
            SSDPFEVQ
Sbjct: 1087 SSDPFEVQ 1094



 Score = 98.6 bits (244), Expect = 2e-17
 Identities = 43/51 (84%), Positives = 50/51 (98%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY++HKLKTGICS+CKNGDN+STM+LPYACKLL QELQSMN+VPRLKL+EA
Sbjct: 1103 GYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLSEA 1153


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
            gi|557534507|gb|ESR45625.1| hypothetical protein
            CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score = 1788 bits (4630), Expect = 0.0
 Identities = 888/1111 (79%), Positives = 986/1111 (88%), Gaps = 1/1111 (0%)
 Frame = -3

Query: 3643 EESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITS 3464
            E+  DKQ L+APVKS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGI+KIV AN+ I S
Sbjct: 13   EQLPDKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVS 72

Query: 3463 DVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKN 3284
             +DP ++L++KDVRIG+PS+T D  +  L PHMCRLSD TYAAPI+V+IEY  GSH +K 
Sbjct: 73   GIDPSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKT 132

Query: 3283 VMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQL 3104
             M KN++VIGR+PIMLRSCRCVL  KDE ELARLGECPLDPGGYF++KGTEKV+LIQEQL
Sbjct: 133  TMEKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQL 192

Query: 3103 SKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMG 2924
            SKNR+II++DKKG + ASVTSSTE  KSKTVI M+K K+YL LN F   IPIMV+MKAMG
Sbjct: 193  SKNRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMG 252

Query: 2923 MESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKE 2744
            MESDQEVVQMVGRDPRY ALLLPSI+ECA  +IYTQE+ALE+LE KVKR TF +   ++E
Sbjct: 253  MESDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDRE 312

Query: 2743 PRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELS 2564
             RA  ILRDVF+ANVPV   NFRPKC YVAVMLRRM+EA+LNKDAMDDKDYVGNKRLELS
Sbjct: 313  GRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELS 372

Query: 2563 GQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNW 2384
            GQL+SLLFEDLFKTM SE++K  D+ L+KPSRSSR D++ +++RD IT GLER +STGN+
Sbjct: 373  GQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNF 432

Query: 2383 DLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2204
            D+KRFKMHRKGMTQVLARLSFI TLGHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 433  DVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 492

Query: 2203 PEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGL 2024
            PEGEACGLVKNLALMTHVTTDE+E PLISLCY LGVEDLELLSGEELH  NSFLVIFNGL
Sbjct: 493  PEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGL 552

Query: 2023 ILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGIS 1844
            ILGKHRRPK FA  MRKLRRAGKIGEFVSVFVNEKQ CVYIASDGGRVCRPLVIADKGIS
Sbjct: 553  ILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGIS 612

Query: 1843 RIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTI 1664
            RIKEHHMKEL DGVR+F+DFLREGL+EYLDVNE+NNALIALYEG+A P+TTHIEIEPFTI
Sbjct: 613  RIKEHHMKELSDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTI 672

Query: 1663 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRT 1484
            LGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLTTRT
Sbjct: 673  LGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRT 732

Query: 1483 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYAN 1304
            IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK +AINQKYAN
Sbjct: 733  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYAN 792

Query: 1303 NTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSLP 1124
            +TSDRI+RP R G  +ERMQILDDDGLA+PGEII+P+D+YINK+SP+ TR +I S     
Sbjct: 793  STSDRILRPDRTGPGSERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQT 852

Query: 1123 DSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKG 944
            DS Y++A QTYKGP GET VVDRVAL SDK+ +LC KF+IRHTRRPE+GDKFSSRHGQKG
Sbjct: 853  DSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKG 912

Query: 943  VCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFG 764
            VCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAFG
Sbjct: 913  VCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFG 972

Query: 763  EPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKM 584
            EPSGHAD VE+ISETLVK GFSY+GKD +YSG  G PLQAYIFMGPIYYQKLKHMVLDKM
Sbjct: 973  EPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKM 1032

Query: 583  HARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQED 404
            HAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLM+SSDPFEVQ  
Sbjct: 1033 HARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQ-- 1090

Query: 403  ISTISSKLAFVPH-AKMGITSLPCNCHMLAS 314
            +  +   L +  H  K GI S   N + ++S
Sbjct: 1091 VCRVCGLLGYYNHKLKAGICSTCKNGNNISS 1121



 Score = 96.7 bits (239), Expect = 7e-17
 Identities = 43/51 (84%), Positives = 48/51 (94%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY+NHKLK GICSTCKNG+NIS+M+LPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1099 GYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149


>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Citrus sinensis] gi|568883651|ref|XP_006494573.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Citrus sinensis]
          Length = 1149

 Score = 1787 bits (4629), Expect = 0.0
 Identities = 889/1109 (80%), Positives = 985/1109 (88%), Gaps = 2/1109 (0%)
 Frame = -3

Query: 3664 QSMGSSGEESI-DKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIV 3488
            Q  GS  +E + DKQ L+APVKS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGI+KIV
Sbjct: 5    QVEGSPKDEQLPDKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIV 64

Query: 3487 AANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYT 3308
             AN+ I S +DP ++L++KDVRIG+PS+T D  +  L PHMCRLSD TYAAPI+V+IEY 
Sbjct: 65   RANDRIVSGIDPSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYV 124

Query: 3307 NGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEK 3128
             GSH +K  M KN++VIGR+PIMLRSCRCVL  KDE ELARLGECPLDPGGYF++KGTEK
Sbjct: 125  QGSHTEKTTMEKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEK 184

Query: 3127 VILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPI 2948
            V+LIQEQLSKNR+II++DKKG + ASVTSSTE  KSKTVI M+K K+YL LN F   IPI
Sbjct: 185  VLLIQEQLSKNRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPI 244

Query: 2947 MVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTF 2768
            MV+MKAMG+ESDQEVVQMVGRDPRY ALLLPSI+ECA  +IYTQE+ALE+LE KVKR TF
Sbjct: 245  MVVMKAMGIESDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTF 304

Query: 2767 SNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYV 2588
             +   ++E RA  ILRDVF+ANVPV   NFRPKC YVAVMLRRM+EA+LNKDAMDDKDYV
Sbjct: 305  GSPPNDREGRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYV 364

Query: 2587 GNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLE 2408
            GNKRLELSGQL+SLLFEDLFKTM SE++K  D+ L+KPSRSSR D++ +++RD IT GLE
Sbjct: 365  GNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLE 424

Query: 2407 RAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQW 2228
            R +STGN+D+KRFKMHRKGMTQVLARLSFI TLGHMT++SPQFEKSRKVSGPRALQPSQW
Sbjct: 425  RTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQW 484

Query: 2227 GMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNS 2048
            GMLCPCDTPEGEACGLVKNLALMTHVTTDE+E PLISLCY LGVEDLELLSGEELH  NS
Sbjct: 485  GMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNS 544

Query: 2047 FLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPL 1868
            FLVIFNGLILGKHRRPK FA  MRKLRRAGKIGEFVSVFVNEKQ CVYIASDGGRVCRPL
Sbjct: 545  FLVIFNGLILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPL 604

Query: 1867 VIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTH 1688
            VIADKGISRIKEHHMKEL DGVR+F+DFLREGL+EYLDVNE+NNALIALYEG+A P+TTH
Sbjct: 605  VIADKGISRIKEHHMKELLDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTH 664

Query: 1687 IEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQ 1508
            IEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQ
Sbjct: 665  IEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQ 724

Query: 1507 RPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLS 1328
            RPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK +
Sbjct: 725  RPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYT 784

Query: 1327 AINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDT 1148
            AINQKYAN+TSDRI+RP R G  AERMQILDDDGLA+PGEII+P+D+YINK+SP+ TR +
Sbjct: 785  AINQKYANSTSDRILRPDRTGPGAERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGS 844

Query: 1147 ITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKF 968
            I S     DS Y++A QTYKGP GET VVDRVAL SDK+ +LC KF+IRHTRRPE+GDKF
Sbjct: 845  IMSPTGQTDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKF 904

Query: 967  SSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGR 788
            SSRHGQKGVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GR
Sbjct: 905  SSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGR 964

Query: 787  FHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKL 608
            FHYGSAFGEPSGHAD VE+ISETLVK GFSY+GKD +YSG  G PLQAYIFMGPIYYQKL
Sbjct: 965  FHYGSAFGEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKL 1024

Query: 607  KHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISS 428
            KHMVLDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLM+SS
Sbjct: 1025 KHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSS 1084

Query: 427  DPFEVQEDISTISSKLAFVPH-AKMGITS 344
            DPFEVQ  +  +   L +  H  K GI S
Sbjct: 1085 DPFEVQ--VCRVCGLLGYYNHKLKAGICS 1111



 Score = 98.6 bits (244), Expect = 2e-17
 Identities = 44/51 (86%), Positives = 48/51 (94%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY+NHKLK GICSTCKNGDNIS+M+LPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1099 GYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149


>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Solanum tuberosum] gi|565393087|ref|XP_006362215.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Solanum tuberosum]
          Length = 1153

 Score = 1753 bits (4540), Expect = 0.0
 Identities = 869/1091 (79%), Positives = 967/1091 (88%), Gaps = 5/1091 (0%)
 Frame = -3

Query: 3667 NQSMGSSGEES---IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIK 3497
            + +M ++ E+S   IDKQ L++P+K+ VDK+QL+PEFLKVRGLVKQHLDSFNYFV T IK
Sbjct: 4    DSTMSNTTEDSNQGIDKQHLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIK 63

Query: 3496 KIVAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSI 3317
            KIV AN  I S +DP +YL+Y+DV IGEPS+  D  T  L P  CRLSD TYAAPI V+I
Sbjct: 64   KIVRANQEIRSILDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTI 123

Query: 3316 EYTNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKG 3137
            EYT GSH + +V TK N++IGRMPIMLRS  CVL  KDEDELARLGECPLDPGGYFV+KG
Sbjct: 124  EYTTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKG 183

Query: 3136 TEKVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAM 2957
            TEKVILIQEQLSKNRIII++DKKG + ASVTSSTE TKSKT+I M+KEK+YL+LN F   
Sbjct: 184  TEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTK 243

Query: 2956 IPIMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLE--KKV 2783
            +PIMV+MKAMGMESDQEVVQM+GRDPR+ ALLLPSI+ECA   +YTQ QALEFLE  K +
Sbjct: 244  VPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQHQALEFLESDKML 303

Query: 2782 KRFTFSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMD 2603
            K  ++S   +EK  RA+ ILRD+F+ANVPV Q NFR KCIYVAVM+RRMMEAILNKDAMD
Sbjct: 304  KMPSYSTGPVEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMD 363

Query: 2602 DKDYVGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDII 2423
            DKDYVGNKRLELSGQL+SLLFEDLFKTMN E ++  D  LA+PSRSSRLDI+ Y+++D I
Sbjct: 364  DKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIVKDSI 423

Query: 2422 THGLERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRAL 2243
            T GLER +STGNWD+KRF+MHRKGMTQV+ARLS+I +LGHMTKISPQFEKSRKVSGPRAL
Sbjct: 424  TMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRAL 483

Query: 2242 QPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEEL 2063
            QPSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P++SLCY LGVEDLE LS EEL
Sbjct: 484  QPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEEL 543

Query: 2062 HTSNSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGR 1883
            H   S+L+  NGLILGKH+ P+ FA AMR+LRRAGKIGEFVS+FVNEKQ CVYIASDGGR
Sbjct: 544  HMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKIGEFVSIFVNEKQRCVYIASDGGR 603

Query: 1882 VCRPLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAE 1703
            VCRPLVIADKG+SRIKEHHM+ELRDGVR F+ FL++GL+EYLDVNE+NN LIALYE EA 
Sbjct: 604  VCRPLVIADKGVSRIKEHHMRELRDGVRDFDSFLKDGLIEYLDVNEENNTLIALYEKEAT 663

Query: 1702 PETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYM 1523
            PETTHIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD L+Y+
Sbjct: 664  PETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYL 723

Query: 1522 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1343
            LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV
Sbjct: 724  LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 783

Query: 1342 MKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPI 1163
            MKK SAI QKY N TSDRII+PQR G EA++MQILDDDG+A+PGE IR HDIYINK+SP 
Sbjct: 784  MKKYSAICQKYENGTSDRIIKPQRQGFEADKMQILDDDGMAAPGETIRNHDIYINKESPT 843

Query: 1162 NTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPE 983
             TR  ITS M LPDSAYKT+ QTYKGP+GETAVVDRVAL+SD++NNL  KF+IRHTRRPE
Sbjct: 844  VTRTPITSPMGLPDSAYKTSRQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPE 903

Query: 982  IGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAG 803
            IGDKFSSRHGQKGVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLG KAG
Sbjct: 904  IGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 963

Query: 802  VSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPI 623
            VS GRFHYGSAFGEPSGHAD V++ISETLVK GFSY+GKDF+YSG  G PLQAYIFMGPI
Sbjct: 964  VSCGRFHYGSAFGEPSGHADTVDSISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPI 1023

Query: 622  YYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFER 443
            YYQKLKHMVLDKMHAR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM+I+ER
Sbjct: 1024 YYQKLKHMVLDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 1083

Query: 442  LMISSDPFEVQ 410
            LMISSDPFEVQ
Sbjct: 1084 LMISSDPFEVQ 1094



 Score = 98.2 bits (243), Expect = 3e-17
 Identities = 44/51 (86%), Positives = 49/51 (96%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY+N+KLKTGICS CKNG+NISTM+LPYACKLLFQELQSMN+VPRLKL EA
Sbjct: 1103 GYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMNIVPRLKLAEA 1153


>ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
            lycopersicum]
          Length = 1183

 Score = 1748 bits (4526), Expect = 0.0
 Identities = 863/1091 (79%), Positives = 967/1091 (88%), Gaps = 5/1091 (0%)
 Frame = -3

Query: 3667 NQSMGSSGEES---IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIK 3497
            + +M ++ E+S   IDKQ L++ +K+ VDK+QL+PEFLKVRGLVKQHLDSFNYFV T IK
Sbjct: 34   DSTMSNTTEDSNQGIDKQHLASHIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIK 93

Query: 3496 KIVAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSI 3317
            KIV AN  I S +DP +YL+Y+DV IGEPS+  D  T  L P  CRLSD TYAAPI V+I
Sbjct: 94   KIVRANQEIRSTLDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTI 153

Query: 3316 EYTNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKG 3137
            +YT GSH + +V TK N++IGRMPIMLRS  CVL  KDEDELARLGECPLDPGGYFV+KG
Sbjct: 154  DYTTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKG 213

Query: 3136 TEKVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAM 2957
            TEKVILIQEQLSKNRIII++DKKG + ASVTSSTE TKSKT+I M+KEK+YL+LN F   
Sbjct: 214  TEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTK 273

Query: 2956 IPIMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLE--KKV 2783
            +PIMV+MKAMGMESDQEVVQM+GRDPR+ ALLLPSI+ECA   +YTQ+QALEFLE  K +
Sbjct: 274  VPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQQQALEFLESDKML 333

Query: 2782 KRFTFSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMD 2603
            K  ++S   +EK  RA+ ILRD+F+ANVPV Q NFR KCIYVAVM+RRMMEAILNKDAMD
Sbjct: 334  KMPSYSTGPIEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMD 393

Query: 2602 DKDYVGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDII 2423
            DKDYVGNKRLELSGQL+SLLFEDLFKTMN E ++  D  LA+PSRSSRLDI+ Y+++D I
Sbjct: 394  DKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIIKDSI 453

Query: 2422 THGLERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRAL 2243
            T GLER +STGNWD+KRF+MHRKGMTQV+ARLS+I +LGHMTKISPQFEKSRKVSGPRAL
Sbjct: 454  TMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRAL 513

Query: 2242 QPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEEL 2063
            QPSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P++SLCY LGVEDLE LS EEL
Sbjct: 514  QPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEEL 573

Query: 2062 HTSNSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGR 1883
            H   S+L+  NGLILGKH+ P+ FA AMR+LRRAGK+GEFVS+FVNEKQ CVYIASDGGR
Sbjct: 574  HMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKVGEFVSIFVNEKQRCVYIASDGGR 633

Query: 1882 VCRPLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAE 1703
            VCRPLVIADKG+SRIKEHHM+ELRDG+R F+ FL++GL+EYLDVNE+NN LIALYE EA 
Sbjct: 634  VCRPLVIADKGVSRIKEHHMRELRDGLRDFDSFLKDGLIEYLDVNEENNTLIALYEKEAT 693

Query: 1702 PETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYM 1523
            PETTHIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD L+Y+
Sbjct: 694  PETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYL 753

Query: 1522 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1343
            LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV
Sbjct: 754  LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 813

Query: 1342 MKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPI 1163
            MKK SAI QKY N TSDRII+PQR G EA+RMQILDDDG+A+PGE IR HDIYINK+SP 
Sbjct: 814  MKKYSAICQKYENGTSDRIIKPQRQGPEADRMQILDDDGMAAPGETIRNHDIYINKESPT 873

Query: 1162 NTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPE 983
             TR  +TS M LPDSAYK++ QTYKGP+GETAVVDRVAL+SD++NNL  KF+IRHTRRPE
Sbjct: 874  VTRTPVTSPMGLPDSAYKSSKQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPE 933

Query: 982  IGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAG 803
            +GDKFSSRHGQKGVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLG KAG
Sbjct: 934  LGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 993

Query: 802  VSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPI 623
            VS GRFHYGSAFGEPSGHAD V+AISETLVK GFSY+GKDF+YSG  G PLQAYIFMGPI
Sbjct: 994  VSCGRFHYGSAFGEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPI 1053

Query: 622  YYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFER 443
            YYQKLKHMV+DKMHAR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM+I+ER
Sbjct: 1054 YYQKLKHMVVDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 1113

Query: 442  LMISSDPFEVQ 410
            LMISSDPFEVQ
Sbjct: 1114 LMISSDPFEVQ 1124



 Score = 98.2 bits (243), Expect = 3e-17
 Identities = 44/51 (86%), Positives = 49/51 (96%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY+N+KLKTGICS CKNG+NISTM+LPYACKLLFQELQSMN+VPRLKL EA
Sbjct: 1133 GYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMNIVPRLKLAEA 1183


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score = 1738 bits (4502), Expect = 0.0
 Identities = 871/1115 (78%), Positives = 972/1115 (87%), Gaps = 5/1115 (0%)
 Frame = -3

Query: 3673 TNNQSMGSSG---EESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTG 3503
            + N+ +G +    +  IDKQF+  P+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNT 
Sbjct: 10   SKNEKLGDNSNPIDSDIDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTE 69

Query: 3502 IKKIVAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIV 3323
            IKKIV AN+ I S  DP +YL++ DVRIGEPS+T +  +  + PHMCRLSD TYAAPI+V
Sbjct: 70   IKKIVKANDRIESSTDPSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILV 129

Query: 3322 SIEYTNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVV 3143
             IEY   SH +K    K ++VIGRMPIMLRS  CVL+ KDE ELARLGECPLDPGGYF++
Sbjct: 130  DIEYIEESHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFII 189

Query: 3142 KGTEKVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFT 2963
            KGTEKV+LIQEQLSKNRIII++DKKG + ASVTSSTEATKSKTVI M+ EKIYLQLN FT
Sbjct: 190  KGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFT 249

Query: 2962 A-MIPIMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKK 2786
               IPIMV++KAMGMES QEVVQMVGRDPRYGALLLPSI+ECA   IYTQEQALE+LE K
Sbjct: 250  TPKIPIMVVLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETK 309

Query: 2785 VKRFTFSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAM 2606
            VK+F F++A  EKE RA+ ILRDVF+ANVPV + NF PKCIYVAVM+RRMM+AIL+KDAM
Sbjct: 310  VKKFQFASAPPEKEGRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAM 369

Query: 2605 DDKDYVGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDI 2426
            DDKDYVGNKRLELSGQLISLLFEDLFKTM SE+KK  D  L K SRSSR D + +L  +I
Sbjct: 370  DDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNI 429

Query: 2425 ITHGLERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRA 2246
            I+ GLER +STGNWD+KRF+MHRKGM+QVLARLSFI+T+GH+T++SPQFEKSRKVSGPRA
Sbjct: 430  ISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRA 489

Query: 2245 LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEE 2066
            LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD++E PLISLCY LGVEDLELLS EE
Sbjct: 490  LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEE 549

Query: 2065 LHTSNSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGG 1886
            LHT NSFLVIFNG ILGKHRRP++FA  MR LRRAGKIGEFVSVFVNEKQ CVYIASDGG
Sbjct: 550  LHTPNSFLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGG 609

Query: 1885 RVCRPLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEA 1706
            RVCRPLVIADKG+SRIKE+HMKEL DGVRTF+DFLR+GL+EYLDVNE+NNALIALYEGEA
Sbjct: 610  RVCRPLVIADKGVSRIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEA 669

Query: 1705 EPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIY 1526
             PETTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y
Sbjct: 670  TPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLY 729

Query: 1525 MLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 1346
            +LVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI
Sbjct: 730  LLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 789

Query: 1345 VMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSP 1166
            V KK S++NQKY NNT+DRI+RP R       MQILDDDGLA+PGEIIRP+DIY+NKQSP
Sbjct: 790  VFKKYSSVNQKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNKQSP 849

Query: 1165 INTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRP 986
            I  +   +    +PD+AY+   Q +KG +GE  VVDRVAL +DK++ LC KF+IR TRRP
Sbjct: 850  IIMKG--SPLPGIPDNAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRP 907

Query: 985  EIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKA 806
            E+GDKFSSRHGQKGVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKA
Sbjct: 908  ELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKA 967

Query: 805  GVSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGP 626
            GVS GRFHYGSAFGEPSGHAD+V+AISETL+K+GFSY+GKDFLYSG  G PLQAYIFMGP
Sbjct: 968  GVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGP 1027

Query: 625  IYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFE 446
            IYYQKLKHMVLDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I+E
Sbjct: 1028 IYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYE 1087

Query: 445  RLMISSDPFEVQEDISTISSKLAFVPH-AKMGITS 344
            RLMISSDPFEVQ  +  +   L +  H  K GI S
Sbjct: 1088 RLMISSDPFEVQ--VCRVCGLLGYYNHKLKTGICS 1120



 Score =  100 bits (249), Expect = 5e-18
 Identities = 45/51 (88%), Positives = 49/51 (96%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY+NHKLKTGICS+CKNGDNISTM+LPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1108 GYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1158


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score = 1731 bits (4482), Expect = 0.0
 Identities = 857/1078 (79%), Positives = 957/1078 (88%)
 Frame = -3

Query: 3643 EESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITS 3464
            E+ IDKQ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVN GIKKIV AN+ I S
Sbjct: 19   EQLIDKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVRANDRIVS 78

Query: 3463 DVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKN 3284
             VDPG+YL++KDVRIG PS   D  +  L+PHMCRLSD TYAAPI+V++EY  GSHD+K 
Sbjct: 79   TVDPGIYLRFKDVRIGTPSDIMDGVSEQLSPHMCRLSDKTYAAPILVNVEYIYGSHDQKT 138

Query: 3283 VMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQL 3104
             + KN++VIGRMPIMLRS  CVL  KDE ELARLGECPLDPGGYFV+KGTEKVILIQEQL
Sbjct: 139  RVEKNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQL 198

Query: 3103 SKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMG 2924
            SKNRIII++DKKG + ASVTSSTEATKSKT+I M+KEK+YL LN F   IPIMV++KAMG
Sbjct: 199  SKNRIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFVKKIPIMVVIKAMG 258

Query: 2923 MESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKE 2744
            MESDQEVVQMVGRDPRY ALLLPSI+ECA  +IYTQ++ALE+L+ K             E
Sbjct: 259  MESDQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKALEYLDGK-------------E 305

Query: 2743 PRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELS 2564
             RA+ ILRDVF+ANVPV + NFRPKC+YVAVMLRRMMEA+LNKDAMDDKDYVGNKRLELS
Sbjct: 306  NRALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKRLELS 365

Query: 2563 GQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNW 2384
            GQLISLLFEDLFKTM +E+++  D  L K +RSSR D+A Y++RD IT+GLER +STGN+
Sbjct: 366  GQLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDNITNGLERTLSTGNF 425

Query: 2383 DLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2204
            D+KRFKMHRKGMTQVL RLS+IA+LG MT++SPQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 426  DVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 485

Query: 2203 PEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGL 2024
            PEGEACGLVKNLALMTHVTTD++E PLISLCY LGVEDLELLSGEELHT NSFLVIFNGL
Sbjct: 486  PEGEACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLSGEELHTPNSFLVIFNGL 545

Query: 2023 ILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGIS 1844
            ILGKHRRP++F  +MRKLRRAGKIGEFVSVFVNEKQ  VY+ASDGGRVCRPLVIAD+G+S
Sbjct: 546  ILGKHRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQRAVYLASDGGRVCRPLVIADRGVS 605

Query: 1843 RIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTI 1664
            RIKEHHMKELRDGVRTF+DFLR+GL+EYLDVNE+NNAL+ALYEGEA PETTHIEIEPFTI
Sbjct: 606  RIKEHHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALVALYEGEATPETTHIEIEPFTI 665

Query: 1663 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRT 1484
            LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL+RMD+L+Y+LVYPQRPLLTTRT
Sbjct: 666  LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDSLLYLLVYPQRPLLTTRT 725

Query: 1483 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYAN 1304
            IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK  AI QKY N
Sbjct: 726  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYPAIRQKYEN 785

Query: 1303 NTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSLP 1124
              SDRI+RP R     ER ++LD DGLA+PGEII+P DIY+ K+ PI+T   + SS +L 
Sbjct: 786  GASDRILRPDRT---VERERVLDYDGLAAPGEIIKPSDIYVKKECPIDTMGPVKSSAALE 842

Query: 1123 DSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKG 944
            +  Y+ +  +YKGP+GE+ V+DRVAL SD++NNLC K +IRHTRRPE+GDKFSSRHGQKG
Sbjct: 843  NIKYRPSPLSYKGPEGESPVIDRVALSSDRNNNLCIKVMIRHTRRPEVGDKFSSRHGQKG 902

Query: 943  VCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFG 764
            VCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAFG
Sbjct: 903  VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFG 962

Query: 763  EPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKM 584
            EPSGHAD VEAISETLV +GFSY+GKD +YSG  G PLQAYIFMGPIYYQKLKHMVLDKM
Sbjct: 963  EPSGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKM 1022

Query: 583  HARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQ 410
            HAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMISSDPFEVQ
Sbjct: 1023 HARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQ 1080



 Score = 97.1 bits (240), Expect = 6e-17
 Identities = 44/51 (86%), Positives = 47/51 (92%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GYFN KL+ GICSTCKNGDNISTM+LPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1089 GYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1139


>ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
            X1 [Glycine max]
          Length = 1165

 Score = 1697 bits (4396), Expect = 0.0
 Identities = 851/1105 (77%), Positives = 957/1105 (86%), Gaps = 4/1105 (0%)
 Frame = -3

Query: 3646 GEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLIT 3467
            G+   D++ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFV T IKKIV AN+LI 
Sbjct: 27   GDSGFDQRVLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTDIKKIVRANDLIV 86

Query: 3466 SDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKK 3287
            +   P +YL++ +V IG+PSI  D  T  LTP  CRLSD TYAAPI   +EYT GSHDK 
Sbjct: 87   ASRYPHIYLRFLNVGIGKPSIMIDEVTEDLTPQTCRLSDLTYAAPICADVEYTLGSHDKP 146

Query: 3286 NVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQ 3107
            ++  K  + IGRMPIMLRSC CVL+ +DE ELA+LGECPLDPGGYFV+KGTEKVILIQEQ
Sbjct: 147  DIKRKLKVEIGRMPIMLRSCCCVLHGRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQ 206

Query: 3106 LSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAM 2927
            LSKNRIII++DKKG + ASVTSSTE  K+KTV+VM+KEK++LQLN F   +P+MV+MKAM
Sbjct: 207  LSKNRIIIDTDKKGNITASVTSSTEKIKTKTVVVMEKEKLWLQLNKFPKKVPLMVVMKAM 266

Query: 2926 GMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEK 2747
            GMESDQEV QMVGRDPRY  LLLPSI+EC    +YT+EQALE+L+K VKR T+SN + EK
Sbjct: 267  GMESDQEVTQMVGRDPRYSFLLLPSIEECTKCKVYTREQALEYLDKLVKRPTYSNNAAEK 326

Query: 2746 EPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLEL 2567
            E  A   LRDVF+ANVPV Q NFRPKCIYVAVM+RR+M+AILNKDAMDDKDYVGNKRLEL
Sbjct: 327  EGAAFSALRDVFLANVPVDQDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLEL 386

Query: 2566 SGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMR--DIITHGLERAIST 2393
            SGQLISLLFEDLFK+M +E+K  TD  L KP ++   DI   L R   IIT GLER +ST
Sbjct: 387  SGQLISLLFEDLFKSMTTEVKNLTDKMLEKPDKAKNFDICTLLTRTRSIITLGLERTLST 446

Query: 2392 GNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP 2213
            GN+++KRF+M RKGMTQVL RLSFI  LGHMT++SPQFEKSRKVSGPRALQPSQWGMLCP
Sbjct: 447  GNFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCP 506

Query: 2212 CDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIF 2033
            CDTPEGE+CGLVKNLALMTHVTTDE+E PLISLC SLGVED++ LS EELHT +SFLVIF
Sbjct: 507  CDTPEGESCGLVKNLALMTHVTTDEEEKPLISLCESLGVEDMKDLSAEELHTPDSFLVIF 566

Query: 2032 NGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADK 1853
            NGLILGKHRRP HFA A+RKLRRAGKIGEFVSV+VNEKQ CVY+ASDGGRVCRPLVIADK
Sbjct: 567  NGLILGKHRRPLHFATAIRKLRRAGKIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADK 626

Query: 1852 GISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEP 1673
            GISRIK+HHMKEL DGVRTF+DFLR+GLLEYLDVNE+NNALIALYEG+A  ETTHIEIEP
Sbjct: 627  GISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNALIALYEGDATSETTHIEIEP 686

Query: 1672 FTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLT 1493
            FTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLT
Sbjct: 687  FTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLT 746

Query: 1492 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQK 1313
            T+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK +AI QK
Sbjct: 747  TKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYNAIIQK 806

Query: 1312 YANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTIT-SS 1136
            ++N+TSDRI+RP R    A RMQILDDDG+A+PGEI+RP+DIYINKQSPI+TR   T S+
Sbjct: 807  HSNDTSDRILRPNRTADTAGRMQILDDDGIAAPGEILRPYDIYINKQSPIDTRTPKTGSA 866

Query: 1135 MSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRH 956
             +LPDSAY++  Q++KG  GE  VVDRV L SDKDNN+C KF+IRHTRRPE+GDKFSSRH
Sbjct: 867  ANLPDSAYRSNAQSFKGNGGE--VVDRVVLCSDKDNNMCIKFLIRHTRRPELGDKFSSRH 924

Query: 955  GQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYG 776
            GQKGVCG IV QED PFSE+GI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYG
Sbjct: 925  GQKGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 984

Query: 775  SAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMV 596
            SAFGE SGHAD+VE ISETLV KGF+YSGKDF+YSG  G PLQAYIFMGPIYYQKLKHMV
Sbjct: 985  SAFGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 1044

Query: 595  LDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFE 416
            LDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I+ERLM+SSDPFE
Sbjct: 1045 LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFE 1104

Query: 415  VQEDISTISSKLAFVPH-AKMGITS 344
            VQ  + T    L +  H  K GI S
Sbjct: 1105 VQ--VCTACGLLGYYNHKLKTGICS 1127



 Score = 98.6 bits (244), Expect = 2e-17
 Identities = 43/51 (84%), Positives = 49/51 (96%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY+NHKLKTGICS+CKNGDNISTM+LPYACKL+ QELQSMN+VPRLKL +A
Sbjct: 1115 GYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLADA 1165


>ref|XP_006279912.1| hypothetical protein CARUB_v10025768mg [Capsella rubella]
            gi|482548616|gb|EOA12810.1| hypothetical protein
            CARUB_v10025768mg [Capsella rubella]
          Length = 1160

 Score = 1686 bits (4365), Expect = 0.0
 Identities = 831/1101 (75%), Positives = 958/1101 (87%), Gaps = 14/1101 (1%)
 Frame = -3

Query: 3670 NNQSMGSSGEES-IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKK 3494
            + + + S+ +++ I+K+ LSAP+KS  DKFQL+PEFLKVRGLVKQHLDSFNY +N GIKK
Sbjct: 4    DQEDLDSTNDDNFINKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYLINVGIKK 63

Query: 3493 IVAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIE 3314
            IV AN LITS  DP +YL++K VR+GEPSI        + PHMCRL+D TYAAPI V+IE
Sbjct: 64   IVKANCLITSTADPSIYLRFKAVRVGEPSILNINMAEQINPHMCRLADMTYAAPIHVNIE 123

Query: 3313 YTNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGT 3134
            Y +GSH +K    KNN++IGRMPIMLRSCRCVLN KDEDELARLGECPLDPGGYFV+KGT
Sbjct: 124  YVHGSHGEKQTSAKNNVLIGRMPIMLRSCRCVLNGKDEDELARLGECPLDPGGYFVIKGT 183

Query: 3133 EKVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMI 2954
            EKV+LIQEQLSKNRIII+SDKKG + ASVTSSTE TKSKTVI M+KE+IYL L+ F   I
Sbjct: 184  EKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKERIYLFLHQFVKKI 243

Query: 2953 PIMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRF 2774
            PI++++KAMGMESDQE+VQMVGRDPR+ A LLPSI+EC +  + TQ+QAL++LE KVK+ 
Sbjct: 244  PIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKT 303

Query: 2773 TFSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKD 2594
            ++    L+K+ RA+ ILRD+F+A+VPVR  NFR KC YV VMLRRM+EA+LNKDAMDDKD
Sbjct: 304  SYG-PPLQKDGRALYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKD 362

Query: 2593 YVGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHG 2414
            YVGNKRLELSGQLISLLFEDLFKTM +E  K  D+ L K +R+SR D +  L  DII+ G
Sbjct: 363  YVGNKRLELSGQLISLLFEDLFKTMITEAIKKVDVILTKQNRASRFDFSQCLSGDIISLG 422

Query: 2413 LERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPS 2234
            LER +STGN+D+KRF+MHRKGMTQVL RLSFI +LG +TKISPQFEKSRKVSGPR+LQPS
Sbjct: 423  LERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPS 482

Query: 2233 QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTS 2054
            QWGMLCPCDTPEGE+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT 
Sbjct: 483  QWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTP 542

Query: 2053 NSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCR 1874
            +SFLVI NGLILGKHRRP++FA ++R+LRRAGKIGEFVSVF NEKQ CVY+ASDGGRVCR
Sbjct: 543  DSFLVILNGLILGKHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDGGRVCR 602

Query: 1873 PLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPE- 1697
            PLVIADKGISR+K+HHMKEL+DGVRTF+DF+R+GL+EYLDVNE+NNALIALYE +A  E 
Sbjct: 603  PLVIADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDATTEL 662

Query: 1696 ------------TTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQ 1553
                        TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQ
Sbjct: 663  DEGGEAAKIRADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ 722

Query: 1552 LYRMDTLIYMLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 1373
            L RMDTL+Y+LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS
Sbjct: 723  LNRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 782

Query: 1372 LDRGFGRCIVMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPH 1193
            LDRGFGRCIVMKK+ A +QKY NNT DRI+RPQR G +AE+MQILD+DG+ASPGEIIRP+
Sbjct: 783  LDRGFGRCIVMKKIVATSQKYDNNTQDRILRPQRTGPDAEKMQILDNDGIASPGEIIRPN 842

Query: 1192 DIYINKQSPINTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFK 1013
            D+YINKQSP++T++ +T+ +S  DS Y+ A + +KGP+GET VVDRVAL S+K ++LC K
Sbjct: 843  DVYINKQSPVDTKNKMTTQLS--DSQYRPAREYFKGPEGETQVVDRVALCSNKHDHLCIK 900

Query: 1012 FIIRHTRRPEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGK 833
            +IIRHTRRPE+GDKFSSRHGQKGVCG I+QQED PFSE GI PDLIMNPHGFPSRMT+GK
Sbjct: 901  YIIRHTRRPELGDKFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGK 960

Query: 832  MIELLGGKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSP 653
            MIELLG KAGVS GRFHYGSAFGE  GHAD+VE IS TLV KGFSYSGKD LYSG  G P
Sbjct: 961  MIELLGSKAGVSCGRFHYGSAFGERGGHADKVETISATLVNKGFSYSGKDLLYSGISGEP 1020

Query: 652  LQAYIFMGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIA 473
            LQAYIFMGPIYYQKLKHMVLDKMHAR  GPRVM+TRQPTEG+S++GGLR+GEMERDCLIA
Sbjct: 1021 LQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIA 1080

Query: 472  YGASMMIFERLMISSDPFEVQ 410
            YGASM+I+ERLM+SSDPFEVQ
Sbjct: 1081 YGASMLIYERLMVSSDPFEVQ 1101



 Score = 92.8 bits (229), Expect = 1e-15
 Identities = 42/51 (82%), Positives = 47/51 (92%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY+++KLK   CSTCKNGDNI+TM+LPYACKLLFQELQSMNVVPRLKL EA
Sbjct: 1110 GYYSYKLKKAFCSTCKNGDNIATMKLPYACKLLFQELQSMNVVPRLKLIEA 1160


>ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutrema salsugineum]
            gi|557099252|gb|ESQ39616.1| hypothetical protein
            EUTSA_v10000748mg [Eutrema salsugineum]
          Length = 1164

 Score = 1677 bits (4344), Expect = 0.0
 Identities = 830/1091 (76%), Positives = 949/1091 (86%), Gaps = 16/1091 (1%)
 Frame = -3

Query: 3634 IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDVD 3455
            +D+Q LSAP+KS  DKFQL+PEFLKVRGLVKQHLDSFNYFVN GIKKIV AN+LITS +D
Sbjct: 17   VDRQKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFVNVGIKKIVRANSLITSSLD 76

Query: 3454 PGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVMT 3275
            P +YL++K+VR+GEPSI        + PHMCRL+D TYAAPI V+IEY +GSH K     
Sbjct: 77   PEIYLRFKEVRVGEPSILNVNMAEEINPHMCRLADMTYAAPIYVNIEYAHGSHGKTQHSA 136

Query: 3274 KNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 3095
            K+N++IGRMPIMLRSCRCVL+ KDE+ELARLGECPLDPGGYFV+KGTEKV+LIQEQLSKN
Sbjct: 137  KDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQEQLSKN 196

Query: 3094 RIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGMES 2915
            RIII+SDKKG + ASVTSSTE TKSKTVI M+K KIYL L+ F   IPI++++KAMGMES
Sbjct: 197  RIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKGKIYLFLHQFVKKIPIIIVLKAMGMES 256

Query: 2914 DQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPRA 2735
            DQE+VQMVGRDPR+ A LLPSI+EC +  + T++QAL++LE KVK+ ++     EK+ RA
Sbjct: 257  DQEIVQMVGRDPRFSASLLPSIEECVSEGVNTRKQALDYLEAKVKKTSYGPPP-EKDGRA 315

Query: 2734 MKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQL 2555
            + ILRDVF+A+VPVR  NFR KC YV VMLRRM+EA+LNKDAMDDKDYVGNKRLELSGQL
Sbjct: 316  LYILRDVFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQL 375

Query: 2554 ISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDI---ITHGLERAISTGNW 2384
            ISLLFEDLFKTM +E  K  D  L KP+R+SR D +  L  +    I+ GLER +STGN+
Sbjct: 376  ISLLFEDLFKTMITEAVKKVDGILQKPNRASRFDFSQCLTGEKNHNISFGLERTLSTGNF 435

Query: 2383 DLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2204
            D+KRF+MHRKGMTQVL RLSFI +LG +TKISPQFEKSRKVSGPR+LQPSQWGMLCPCDT
Sbjct: 436  DIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDT 495

Query: 2203 PEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGL 2024
            PEGE+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT +SFLVIFNGL
Sbjct: 496  PEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVIFNGL 555

Query: 2023 ILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGIS 1844
            ILGKHRRP++FA ++R+LRRAGKIGEFVSVF+NEKQ CVY+ASDGGRVCRPLVIADKG+S
Sbjct: 556  ILGKHRRPQYFANSLRRLRRAGKIGEFVSVFINEKQHCVYVASDGGRVCRPLVIADKGVS 615

Query: 1843 RIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPE----------- 1697
            R+K+HHMKEL+DGVRTF+DF+R+GL+EYLDVNE+NNALIALYE +A  E           
Sbjct: 616  RVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDATSEMAETAEAAKIR 675

Query: 1696 --TTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYM 1523
              TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y+
Sbjct: 676  EGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLYL 735

Query: 1522 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1343
            LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS +GYDIEDAIVMNK+SLDRGFGRCIV
Sbjct: 736  LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNTGYDIEDAIVMNKASLDRGFGRCIV 795

Query: 1342 MKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPI 1163
            MKK+ A  QKY N+  DRI+RPQR G +AE+MQILDDDG+A+PGEIIRP+D+YINKQ P+
Sbjct: 796  MKKIVATCQKYGNDAVDRILRPQRTGPDAEKMQILDDDGIAAPGEIIRPNDVYINKQIPV 855

Query: 1162 NTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPE 983
            +TRD ITS +S  DS Y+ A + +KGP+GET VVDRVAL SDK+ NLC K+IIRHTRRPE
Sbjct: 856  DTRDNITSPLS--DSQYRPAREYFKGPEGETQVVDRVALCSDKNGNLCIKYIIRHTRRPE 913

Query: 982  IGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAG 803
            +GDKFSSRHGQKGVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLG KAG
Sbjct: 914  LGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 973

Query: 802  VSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPI 623
            V SGRFHYGSAFGE SGHAD+VE IS TLVK GFSYSGKD LYSG  G PLQ Y+FMGPI
Sbjct: 974  VCSGRFHYGSAFGERSGHADKVETISATLVKHGFSYSGKDLLYSGLSGEPLQTYVFMGPI 1033

Query: 622  YYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFER 443
            YYQKLKHMVLDKMHAR  GPRVM+TRQPTEG+S++GGLR+GEMERDCLIAYGASM+I+ER
Sbjct: 1034 YYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYER 1093

Query: 442  LMISSDPFEVQ 410
            LMISSDPFEVQ
Sbjct: 1094 LMISSDPFEVQ 1104



 Score = 95.1 bits (235), Expect = 2e-16
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY+N+KLK   CSTCKNGDNI+TM+LPYACKLLFQELQSMNVVPRLKL EA
Sbjct: 1113 GYYNYKLKKAFCSTCKNGDNIATMKLPYACKLLFQELQSMNVVPRLKLVEA 1163


>ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phaseolus vulgaris]
            gi|561026273|gb|ESW24958.1| hypothetical protein
            PHAVU_004G175000g [Phaseolus vulgaris]
          Length = 1161

 Score = 1674 bits (4335), Expect = 0.0
 Identities = 838/1104 (75%), Positives = 952/1104 (86%), Gaps = 4/1104 (0%)
 Frame = -3

Query: 3643 EESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITS 3464
            +   D++ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFV T IKKIV ANNLI++
Sbjct: 24   DSGFDQRILTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVRANNLISA 83

Query: 3463 DVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKN 3284
               P +YL++ +V+I +P I  +  T  +TP  CRLSD TYAAPI V +EYT+GS D   
Sbjct: 84   TRHPHIYLRFLNVKIRKPCIMDESVTDDVTPQTCRLSDQTYAAPICVDVEYTHGSRDDPR 143

Query: 3283 VMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQL 3104
            +  + N+ IGRMPIMLRSC CVL  +D+ ELA+LGECPLDPGGYFVVKGTEKVILIQEQL
Sbjct: 144  LHKRLNVEIGRMPIMLRSCCCVLYGRDQAELAKLGECPLDPGGYFVVKGTEKVILIQEQL 203

Query: 3103 SKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMG 2924
            SKNRIII++DKKG + ASVTSSTE  K+KT+IVM+ EK++L LN F   +P+M +MKAMG
Sbjct: 204  SKNRIIIDTDKKGNIAASVTSSTEKIKTKTIIVMENEKLWLHLNQFPKKVPLMAVMKAMG 263

Query: 2923 MESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKE 2744
            +ESDQEV QMVGRDPRY  LLLPS +EC   N+YTQEQALE+L+K VKR  +S+ S EKE
Sbjct: 264  IESDQEVTQMVGRDPRYSFLLLPSFEECRKCNVYTQEQALEYLDKMVKRSMYSSNSAEKE 323

Query: 2743 PRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELS 2564
             RA  +LRDVF+ANVPV   NFRPKCIYVAVM+RR+M+AILNKDAMDDKDYVGNKRLELS
Sbjct: 324  GRAFSVLRDVFLANVPVDGDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELS 383

Query: 2563 GQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMR--DIITHGLERAISTG 2390
            GQLISLLFEDLFK+M +E+K  TD  L KP ++   DI+  L R  +IIT GLER +STG
Sbjct: 384  GQLISLLFEDLFKSMATEVKNLTDKMLDKPDKARNFDISTLLNRTQNIITLGLERTLSTG 443

Query: 2389 NWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPC 2210
            N+++KRF+M RKGMTQVL RLSFI  +GHMT++SPQFEKSRKVSGPRALQPSQWGMLCPC
Sbjct: 444  NFEIKRFRMERKGMTQVLQRLSFIGAMGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPC 503

Query: 2209 DTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFN 2030
            DTPEGE+CGLVKNLALMTHVTTDE+E+PLIS+CYSLGVEDLELLS EELHT +SFLVI N
Sbjct: 504  DTPEGESCGLVKNLALMTHVTTDEEESPLISMCYSLGVEDLELLSAEELHTPDSFLVILN 563

Query: 2029 GLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKG 1850
            GLILGKH+RP  FA A+RKLRR GKIGEFVSVFV+EKQ CVY+ASDGGRVCRPLVIADKG
Sbjct: 564  GLILGKHKRPLRFATAIRKLRRRGKIGEFVSVFVHEKQNCVYLASDGGRVCRPLVIADKG 623

Query: 1849 ISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPF 1670
            ISRIK+HHMKEL DGVRTF+DFLR+GLLEYLDVNE+NN LIALYEG+A  ETTHIEIEPF
Sbjct: 624  ISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNTLIALYEGDATSETTHIEIEPF 683

Query: 1669 TILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTT 1490
            TILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLTT
Sbjct: 684  TILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLTT 743

Query: 1489 RTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKY 1310
            +TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK SA+ QK+
Sbjct: 744  KTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVIQKH 803

Query: 1309 ANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSM- 1133
            +N+TSDRI+RP R    A RM+ILDDDG+A+PGEI++P DIYINKQSPI+TR   T +  
Sbjct: 804  SNDTSDRILRPNRAADTAGRMRILDDDGIAAPGEILKPFDIYINKQSPIDTRTPRTGAAG 863

Query: 1132 SLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHG 953
            +LPDSAY++  Q++KG  GE  VVDRV L SDKD N+C KF+IRHTRRPE+GDKFSSRHG
Sbjct: 864  NLPDSAYRSNSQSFKGHGGE--VVDRVVLCSDKDKNMCIKFLIRHTRRPELGDKFSSRHG 921

Query: 952  QKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGS 773
            QKGVCG IVQQED PFSE+GI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGS
Sbjct: 922  QKGVCGTIVQQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 981

Query: 772  AFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVL 593
            AFGE SGHAD+VEAISETLV KGFSYSGKDF+YSG  G PLQAYIFMGPIYYQKLKHMVL
Sbjct: 982  AFGERSGHADKVEAISETLVSKGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVL 1041

Query: 592  DKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEV 413
            DKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I+ERLM+SSDPFEV
Sbjct: 1042 DKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEV 1101

Query: 412  QEDISTISSKLAFVPH-AKMGITS 344
            Q  + T    L +  H  K GI S
Sbjct: 1102 Q--VCTACGLLGYYNHKLKTGICS 1123



 Score = 95.1 bits (235), Expect = 2e-16
 Identities = 42/51 (82%), Positives = 47/51 (92%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY+NHKLKTGICS CKNGD ISTM+LPYACKL+ QELQSMN+VPRLKL +A
Sbjct: 1111 GYYNHKLKTGICSYCKNGDKISTMKLPYACKLMIQELQSMNIVPRLKLADA 1161


>ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
            [Fragaria vesca subsp. vesca]
          Length = 1163

 Score = 1672 bits (4331), Expect = 0.0
 Identities = 833/1098 (75%), Positives = 938/1098 (85%), Gaps = 1/1098 (0%)
 Frame = -3

Query: 3634 IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDVD 3455
            IDK+ L+AP+KS  DKF L+PEFLKVRGLVKQHLDSFNYFVNTGIKKIV AN+ I S VD
Sbjct: 33   IDKELLAAPIKSAKDKFALIPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSGVD 92

Query: 3454 PGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVMT 3275
            P ++L++ +V I  PS+T D  T  + PH CRLSD TY+API V +EY  GSHD+K + T
Sbjct: 93   PSIWLRFNNVYIDRPSLTTDGVTTEIAPHTCRLSDMTYSAPIRVDVEYVEGSHDQKMIAT 152

Query: 3274 KNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 3095
            +  I IGR+PIMLRSC C L  K E ELA LGECPLDPGGYF++KG EKV+LIQEQLSKN
Sbjct: 153  RKGIEIGRLPIMLRSCCCTLYGKTESELATLGECPLDPGGYFIIKGNEKVLLIQEQLSKN 212

Query: 3094 RIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGMES 2915
            RIII+ DKKG + ASVTSS+E  KSKT+I M+K+KIYL+LN F+  IPIMV+MKAMGM S
Sbjct: 213  RIIIDMDKKGNVNASVTSSSETIKSKTIIQMEKQKIYLELNQFSKKIPIMVVMKAMGMTS 272

Query: 2914 DQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPRA 2735
            DQEVVQMVGRDPRYGALL+PSI+ECA   IYT+EQAL +LE KVKR  F +AS +K+ + 
Sbjct: 273  DQEVVQMVGRDPRYGALLMPSIEECAKEGIYTKEQALLYLEPKVKRSMFDSASSDKDSKV 332

Query: 2734 MKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQL 2555
            M +LRD+F+ANVPVR+ NFRPKCIYVAVMLRR+M+AILNKD MDDKDYVGNKRLELSGQ 
Sbjct: 333  MAVLRDIFIANVPVRRSNFRPKCIYVAVMLRRIMDAILNKDTMDDKDYVGNKRLELSGQS 392

Query: 2554 ISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNWDLK 2375
            ISLLFEDLFKTM SE++K  D  L KPSRSSR D+A Y+ +D I+ GLER +STGN+DLK
Sbjct: 393  ISLLFEDLFKTMISEVRKTVDNILTKPSRSSRFDLAQYIRKDQISLGLERTLSTGNFDLK 452

Query: 2374 RFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 2195
            RFKMHR GMTQVLARLSFI +LG MT+  PQFEKSRKVSGPRALQPSQWGMLCPCDTPEG
Sbjct: 453  RFKMHRTGMTQVLARLSFIGSLGQMTRTKPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 512

Query: 2194 EACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGLILG 2015
            EACGLVKNLALM HVTTDE+E PLISLC  LGVEDLE LS EELH+ NSFLV+FNG ILG
Sbjct: 513  EACGLVKNLALMAHVTTDEEEGPLISLCKCLGVEDLETLSAEELHSPNSFLVLFNGDILG 572

Query: 2014 KHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGISRIK 1835
            KHR+P+  A AMRKLRRAGKIGEFVSVFVNEKQ CVYIASDGGRVCRPLVIADKGISR+K
Sbjct: 573  KHRKPQRLATAMRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGISRVK 632

Query: 1834 EHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTILGV 1655
            E+HM+EL  GVRTF+DFL +GL+EYLDVNEQNNALIALYE EA  ETTHIEIEPFTILGV
Sbjct: 633  EYHMQELNAGVRTFDDFLSDGLIEYLDVNEQNNALIALYEDEATTETTHIEIEPFTILGV 692

Query: 1654 CAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRTIEL 1475
             AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL R+D L+Y+LVYPQRPLLTT+TIEL
Sbjct: 693  IAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRID-LLYLLVYPQRPLLTTKTIEL 751

Query: 1474 VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYANNTS 1295
            VG+DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI+MKK    NQ Y+NNT 
Sbjct: 752  VGFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCILMKKFVVANQNYSNNTQ 811

Query: 1294 DRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSLPDSA 1115
            DRII+P +   ++ +M++LDDDG+A+PGEII  +DIY+ KQ PI TR  I S   L DS 
Sbjct: 812  DRIIKPNKDEVDSGKMRVLDDDGIAAPGEIITANDIYVKKQVPIVTRGAIRS--GLKDSD 869

Query: 1114 YKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKGVCG 935
            Y++  Q YKGP GE+ VVD+VALFSDK NNLC K +IRHTRRPE+GDKFSSRHGQKGVCG
Sbjct: 870  YRSTFQRYKGPDGESCVVDKVALFSDKHNNLCVKLLIRHTRRPEVGDKFSSRHGQKGVCG 929

Query: 934  IIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFGEPS 755
             IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAFGEPS
Sbjct: 930  TIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 989

Query: 754  GHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKMHAR 575
            GHAD+VEAISETLV+ GFSY GKD++ SG  G PLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 990  GHADKVEAISETLVRMGFSYDGKDYICSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1049

Query: 574  ARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQEDIST 395
              GPRV LTRQPTEG++R+GGLR+GEMERDCLIAYGASM+++ERLMISSDPFEVQ  +  
Sbjct: 1050 GSGPRVSLTRQPTEGKARNGGLRVGEMERDCLIAYGASMLLYERLMISSDPFEVQ--VCR 1107

Query: 394  ISSKLAFVPH-AKMGITS 344
            +   L +  H  K GI S
Sbjct: 1108 VCGLLGYYNHKMKAGICS 1125



 Score = 97.8 bits (242), Expect = 3e-17
 Identities = 43/51 (84%), Positives = 48/51 (94%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY+NHK+K GICS+CKNGDNISTM+LPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1113 GYYNHKMKAGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1163


>ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arabidopsis lyrata subsp.
            lyrata] gi|297309357|gb|EFH39781.1| hypothetical protein
            ARALYDRAFT_917015 [Arabidopsis lyrata subsp. lyrata]
          Length = 1165

 Score = 1669 bits (4322), Expect = 0.0
 Identities = 832/1099 (75%), Positives = 948/1099 (86%), Gaps = 18/1099 (1%)
 Frame = -3

Query: 3652 SSGEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNL 3473
            ++ +  IDK+ LSAP+KS  DKFQL+PEFLKVRGLVKQHLDSFNYF+N GIKKIV AN  
Sbjct: 11   TNDDNFIDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIKKIVHANCR 70

Query: 3472 ITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHD 3293
            I S  DP +YL++K+VR+GEPSI     +  + PHMCRL+D TYAAPI V+IEY +GSH 
Sbjct: 71   IASVTDPSIYLRFKNVRVGEPSIMNINISEEINPHMCRLADMTYAAPIYVNIEYVHGSHG 130

Query: 3292 KKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQ 3113
            KK    KN+ +IGRMPIMLRSCRCVL+ KDE+ELARLGECPLDPGGYFV+KGTEKV+LIQ
Sbjct: 131  KKATSVKNDFIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQ 190

Query: 3112 EQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMK 2933
            EQLSKNRIII+SDKKG + ASVTSSTE TKSKTVI M+KEKIYL L+ F   IPI++++K
Sbjct: 191  EQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHQFVKKIPIVIVLK 250

Query: 2932 AMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASL 2753
            AMGMESDQE+VQMVGRDPR+ A LLPSI+EC +  + TQ+QAL++LE KVK+ ++     
Sbjct: 251  AMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKTSYGPPP- 309

Query: 2752 EKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRL 2573
            EK+ RA+ ILRD+F+A+VPVR  NFR KC YV VMLRRM+EA+LNKD+MDDKDYVGNKRL
Sbjct: 310  EKDGRALYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDSMDDKDYVGNKRL 369

Query: 2572 ELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLM----RDIITHGLER 2405
            ELSGQL+SLLFEDLFKTM SE  K  D  L+KPSR+SR D + YL     ++ I+ GLER
Sbjct: 370  ELSGQLMSLLFEDLFKTMLSEAIKKVDAILSKPSRASRFDFSQYLTTGDSQNTISVGLER 429

Query: 2404 AISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWG 2225
             +STGN+D+KRF+MHRKGMTQVL RLSFI +LG +TKISPQFEKSRKVSGPR+LQPSQWG
Sbjct: 430  TLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWG 489

Query: 2224 MLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSF 2045
            MLCPCDTPEGE+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT +SF
Sbjct: 490  MLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSF 549

Query: 2044 LVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLV 1865
            LVI NGLILGKHRRP++FA ++R+LRRAGKIGEFVSVF NEKQ CVY+ASDGGRVCRPLV
Sbjct: 550  LVILNGLILGKHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDGGRVCRPLV 609

Query: 1864 IADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPE---- 1697
            IADKGISR+K+HHMKEL+DGVRTF+DF+R+GL+EYLDVNE+NNALIALYE EA  E    
Sbjct: 610  IADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESEATTELDEG 669

Query: 1696 ---------TTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYR 1544
                     TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL R
Sbjct: 670  AEAAKIKADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNR 729

Query: 1543 MDTLIYMLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 1364
            MDTL+Y+LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS SGYDIEDAIVMNKSSLDR
Sbjct: 730  MDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNSGYDIEDAIVMNKSSLDR 789

Query: 1363 GFGRCIVMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIY 1184
            GFGRCIVMKK+ A  QKY N T DRI+ PQR G +AE+MQILDDDG+ASPGEIIRP+D+Y
Sbjct: 790  GFGRCIVMKKIVATCQKYENGTVDRILMPQRTGPDAEKMQILDDDGIASPGEIIRPNDVY 849

Query: 1183 INKQSPI-NTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFI 1007
            I KQ P+  TRD ITS +S  DS Y+ A + +KGP+GET VVDRVAL SDK  +LC K+I
Sbjct: 850  IYKQIPVCTTRDKITSPLS--DSQYRPAREFFKGPEGETQVVDRVALCSDKSGSLCIKYI 907

Query: 1006 IRHTRRPEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMI 827
            IRHTRRPE+GDKFSSRHGQKGVCG I+QQED PFSE GI PDLIMNPHGFPSRMT+GKMI
Sbjct: 908  IRHTRRPELGDKFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMI 967

Query: 826  ELLGGKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQ 647
            ELLG KAGVS GRFHYGSAFGE SGHAD+VE IS+TLV KGFSYSGKD LYSG  G PL+
Sbjct: 968  ELLGSKAGVSCGRFHYGSAFGERSGHADKVETISKTLVDKGFSYSGKDLLYSGLSGEPLE 1027

Query: 646  AYIFMGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYG 467
            AYIFMGPIYYQKLKHMVLDKMHAR  GPRVM+TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1028 AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYG 1087

Query: 466  ASMMIFERLMISSDPFEVQ 410
            ASM+I+ERLMISSDPFEVQ
Sbjct: 1088 ASMLIYERLMISSDPFEVQ 1106



 Score = 96.3 bits (238), Expect = 1e-16
 Identities = 43/51 (84%), Positives = 48/51 (94%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY+N+KLK  +CSTCKNGDNI+TM+LPYACKLLFQELQSMNVVPRLKL EA
Sbjct: 1115 GYYNYKLKKAVCSTCKNGDNIATMKLPYACKLLFQELQSMNVVPRLKLVEA 1165


>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
            X1 [Glycine max]
          Length = 1166

 Score = 1669 bits (4321), Expect = 0.0
 Identities = 845/1121 (75%), Positives = 952/1121 (84%), Gaps = 11/1121 (0%)
 Frame = -3

Query: 3673 TNNQSMGSS-------GEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYF 3515
            T NQ  G +       G+   D++ L+AP+KS VDKFQL+PEFLKVRGLVKQHLDSFNYF
Sbjct: 12   TTNQFNGGNKLPGDHCGDSGFDQRVLTAPIKSAVDKFQLIPEFLKVRGLVKQHLDSFNYF 71

Query: 3514 VNTGIKKIVAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAA 3335
            V T IKKIV ANNLI +   P +YL++ +V IG+PS+  D  T  LTP  CRLSD TYAA
Sbjct: 72   VRTDIKKIVRANNLIMASRYPHIYLRFLNVGIGKPSMMIDEVTEGLTPQTCRLSDLTYAA 131

Query: 3334 PIIVSIEYTNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGG 3155
            PI   +EYT  SHDK +      + IGRMPIMLRSC CVL+ KDE ELA+LGECPLDPGG
Sbjct: 132  PICADVEYTLRSHDKPDNKRTLRVEIGRMPIMLRSCCCVLHGKDEAELAKLGECPLDPGG 191

Query: 3154 YFVVKGTEKVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQL 2975
            YFV+KGTEKVILIQEQLSKNRIII++DKKG + ASVTSSTE  K+KTVIVM+ EK++LQL
Sbjct: 192  YFVIKGTEKVILIQEQLSKNRIIIDTDKKGNITASVTSSTEKIKTKTVIVMENEKLWLQL 251

Query: 2974 NTFTAMIPIMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFL 2795
            N F   +P+MV+MKAMGMESDQEV+QMVGRDPRY  LLLPSI+EC    +YT+EQALE+L
Sbjct: 252  NKFPKKVPLMVVMKAMGMESDQEVIQMVGRDPRYSFLLLPSIEECRKCKVYTKEQALEYL 311

Query: 2794 EKKVKRFTFSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNK 2615
            +K VKR T+S+ S EKE  A   LRDVF+ANVPV Q NF+ KCIYVAVM+RR+M+AILNK
Sbjct: 312  DKLVKRPTYSSNSAEKEGAAFSALRDVFLANVPVDQDNFQKKCIYVAVMMRRIMDAILNK 371

Query: 2614 DAMDDKDYVGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLM 2435
            DAMDDKDYVGNKRLELSGQLISLLFEDLFK+M +E+K  TD  L KP ++   DI   L 
Sbjct: 372  DAMDDKDYVGNKRLELSGQLISLLFEDLFKSMTTEVKNLTDKMLDKPDKAKNFDICTLLT 431

Query: 2434 R--DIITHGLERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKV 2261
            R   IIT GLER +STGN+++KRF+M RKGMTQVL RLSFI  LGHMT++SPQFEKSRKV
Sbjct: 432  RTRSIITLGLERTLSTGNFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKV 491

Query: 2260 SGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLEL 2081
            SGPRALQPSQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDE+E PLISL YSL V  +E 
Sbjct: 492  SGPRALQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEKPLISLFYSLDVARIEH 551

Query: 2080 LSGEELHTSNSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYI 1901
            L  EELHT +SFLVIFNGLILGKHRRP HFA  +RKLRRAG+IGEFVSV+VNEKQ CVY+
Sbjct: 552  LFAEELHTPDSFLVIFNGLILGKHRRPLHFATRIRKLRRAGEIGEFVSVYVNEKQHCVYL 611

Query: 1900 ASDGGRVCRPLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIAL 1721
            ASDGGRVCRPLVIADKGISRIK+HHMKEL DGV TF+DFLR+GLLEYLDVNE+NNALIAL
Sbjct: 612  ASDGGRVCRPLVIADKGISRIKQHHMKELMDGVCTFDDFLRDGLLEYLDVNEENNALIAL 671

Query: 1720 YEGEAEPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRM 1541
            YEG+A  ETTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RM
Sbjct: 672  YEGDATSETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRM 731

Query: 1540 DTLIYMLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRG 1361
            D+L+Y+LVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRG
Sbjct: 732  DSLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRG 791

Query: 1360 FGRCIVMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYI 1181
            FGRCIVMKK +AI QK++N+TSDRI+RP R    A RMQILDDDG+A+PGEI+RP+DIYI
Sbjct: 792  FGRCIVMKKYNAIIQKHSNDTSDRILRPNRTADTAGRMQILDDDGIAAPGEILRPYDIYI 851

Query: 1180 NKQSPINTRDTIT-SSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFII 1004
            NKQSPI+TR   T S+ +LPDSAY++  Q++KG  GE  VVDRV L SDKDNN+C KF+I
Sbjct: 852  NKQSPIDTRTPKTGSAANLPDSAYRSNAQSFKGNGGE--VVDRVVLCSDKDNNMCIKFLI 909

Query: 1003 RHTRRPEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIE 824
            RHTRRPE+GDKFSSRHGQKGVCG IV QED PFSE+GI PDLIMNPHGFPSRMT+GKMIE
Sbjct: 910  RHTRRPELGDKFSSRHGQKGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIE 969

Query: 823  LLGGKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQA 644
            LLGGKAGVS GRFHYGSAFGE SGHAD+VE ISETLV KGF+YSGKDF+YSG  G PLQA
Sbjct: 970  LLGGKAGVSCGRFHYGSAFGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQA 1029

Query: 643  YIFMGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGA 464
            YIFMGPIYYQKLKHMVLDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGA
Sbjct: 1030 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGA 1089

Query: 463  SMMIFERLMISSDPFEVQEDISTISSKLAFVPH-AKMGITS 344
            SM+I+ERLM+SSDPFEVQ  + T    L +  H  K GI S
Sbjct: 1090 SMLIYERLMLSSDPFEVQ--VCTACGLLGYYNHKLKTGICS 1128



 Score = 98.6 bits (244), Expect = 2e-17
 Identities = 43/51 (84%), Positives = 49/51 (96%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY+NHKLKTGICS+CKNGDNISTM+LPYACKL+ QELQSMN+VPRLKL +A
Sbjct: 1116 GYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLADA 1166


>ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X3 [Citrus sinensis]
          Length = 1058

 Score = 1667 bits (4316), Expect = 0.0
 Identities = 826/1022 (80%), Positives = 911/1022 (89%), Gaps = 1/1022 (0%)
 Frame = -3

Query: 3406 ITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVMTKNNIVIGRMPIMLRSC 3227
            +T D  +  L PHMCRLSD TYAAPI+V+IEY  GSH +K  M KN++VIGR+PIMLRSC
Sbjct: 1    MTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEKNDVVIGRIPIMLRSC 60

Query: 3226 RCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIESDKKGRLVASV 3047
            RCVL  KDE ELARLGECPLDPGGYF++KGTEKV+LIQEQLSKNR+II++DKKG + ASV
Sbjct: 61   RCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNRVIIDTDKKGNINASV 120

Query: 3046 TSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGMESDQEVVQMVGRDPRYGA 2867
            TSSTE  KSKTVI M+K K+YL LN F   IPIMV+MKAMG+ESDQEVVQMVGRDPRY A
Sbjct: 121  TSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGIESDQEVVQMVGRDPRYSA 180

Query: 2866 LLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPRAMKILRDVFVANVPVRQ 2687
            LLLPSI+ECA  +IYTQE+ALE+LE KVKR TF +   ++E RA  ILRDVF+ANVPV  
Sbjct: 181  LLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRAFSILRDVFLANVPVHN 240

Query: 2686 LNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMNSEI 2507
             NFRPKC YVAVMLRRM+EA+LNKDAMDDKDYVGNKRLELSGQL+SLLFEDLFKTM SE+
Sbjct: 241  NNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEV 300

Query: 2506 KKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNWDLKRFKMHRKGMTQVLARL 2327
            +K  D+ L+KPSRSSR D++ +++RD IT GLER +STGN+D+KRFKMHRKGMTQVLARL
Sbjct: 301  QKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARL 360

Query: 2326 SFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVT 2147
            SFI TLGHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVT
Sbjct: 361  SFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVT 420

Query: 2146 TDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGLILGKHRRPKHFAYAMRKLR 1967
            TDE+E PLISLCY LGVEDLELLSGEELH  NSFLVIFNGLILGKHRRPK FA  MRKLR
Sbjct: 421  TDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILGKHRRPKCFADVMRKLR 480

Query: 1966 RAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGISRIKEHHMKELRDGVRTFND 1787
            RAGKIGEFVSVFVNEKQ CVYIASDGGRVCRPLVIADKGISRIKEHHMKEL DGVR+F+D
Sbjct: 481  RAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIKEHHMKELLDGVRSFDD 540

Query: 1786 FLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTILGVCAGLIPFPHHNQSPRN 1607
            FLREGL+EYLDVNE+NNALIALYEG+A P+TTHIEIEPFTILGV AGLIP+PHHNQSPRN
Sbjct: 541  FLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTILGVIAGLIPYPHHNQSPRN 600

Query: 1606 TYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRTIELVGYDKLGAGQNATVAV 1427
            TYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLTTRTIELVGYDKLGAGQNATVAV
Sbjct: 601  TYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAV 660

Query: 1426 MSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYANNTSDRIIRPQRVGREAERM 1247
            MSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK +AINQKYAN+TSDRI+RP R G  AERM
Sbjct: 661  MSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTSDRILRPDRTGPGAERM 720

Query: 1246 QILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSLPDSAYKTAIQTYKGPQGETA 1067
            QILDDDGLA+PGEII+P+D+YINK+SP+ TR +I S     DS Y++A QTYKGP GET 
Sbjct: 721  QILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQTDSRYRSARQTYKGPDGETC 780

Query: 1066 VVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGIS 887
            VVDRVAL SDK+ +LC KF+IRHTRRPE+GDKFSSRHGQKGVCG IVQQED PFSERGI 
Sbjct: 781  VVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGIC 840

Query: 886  PDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKK 707
            PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAFGEPSGHAD VE+ISETLVK 
Sbjct: 841  PDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADTVESISETLVKH 900

Query: 706  GFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGR 527
            GFSY+GKD +YSG  G PLQAYIFMGPIYYQKLKHMVLDKMHAR  GPRVMLTRQPTEGR
Sbjct: 901  GFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGR 960

Query: 526  SRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQEDISTISSKLAFVPH-AKMGI 350
            +R+GGLR+GEMERDCLIAYGASM+IFERLM+SSDPFEVQ  +  +   L +  H  K GI
Sbjct: 961  ARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQ--VCRVCGLLGYYNHKLKAGI 1018

Query: 349  TS 344
             S
Sbjct: 1019 CS 1020



 Score = 98.6 bits (244), Expect = 2e-17
 Identities = 44/51 (86%), Positives = 48/51 (94%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY+NHKLK GICSTCKNGDNIS+M+LPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1008 GYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1058


>ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
            tuberosum]
          Length = 1151

 Score = 1667 bits (4316), Expect = 0.0
 Identities = 829/1078 (76%), Positives = 939/1078 (87%), Gaps = 3/1078 (0%)
 Frame = -3

Query: 3634 IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDV- 3458
            IDKQ+L++P+K+ VDK+QL+PEFLKVRGLVKQHL SFNY V T IKKIV AN+ I S   
Sbjct: 20   IDKQYLASPIKNSVDKYQLIPEFLKVRGLVKQHLASFNYLVKTDIKKIVRANHEIRSSTR 79

Query: 3457 DPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVM 3278
            DP +YL+Y+DVRIGEPS+T D     L+P  CRL+D TYAAPI V+++YT   + + +++
Sbjct: 80   DPNIYLRYRDVRIGEPSMTYDGVREKLSPQKCRLADLTYAAPIFVTVDYTMTRNGQISML 139

Query: 3277 TKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 3098
            T+ ++VI RMPIMLRSC CVL  KDE++LA+LGECPLDPGGYF+V G EKVILIQEQLSK
Sbjct: 140  TQKDVVIARMPIMLRSCLCVLYEKDEEQLAKLGECPLDPGGYFIVNGREKVILIQEQLSK 199

Query: 3097 NRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGME 2918
            NRIII++D+KG + ASV  STE TKSKT+I M+KEK+YL+LN F   +PIMV+MKAMGME
Sbjct: 200  NRIIIDTDRKGCVQASVICSTEKTKSKTIIKMEKEKVYLELNMFKTKVPIMVVMKAMGME 259

Query: 2917 SDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLE--KKVKRFTFSNASLEKE 2744
            SDQEVVQM+GRDPRY ALLLPSI+ECA   +YTQ QALEFLE  K +   ++ NA +EK 
Sbjct: 260  SDQEVVQMIGRDPRYSALLLPSIEECADLKLYTQHQALEFLESDKMLTMPSYYNAPVEKG 319

Query: 2743 PRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELS 2564
             RA+ ILRD+F+A+VPV Q NFR KCIYVAVM+RR+MEAILNKDAMDDKDYVGNKRLELS
Sbjct: 320  ARALSILRDMFLAHVPVHQHNFRKKCIYVAVMMRRVMEAILNKDAMDDKDYVGNKRLELS 379

Query: 2563 GQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNW 2384
            GQL+SLLFEDLFKTMN E+++  D +    S+SS L + H    + IT  L+R +STGNW
Sbjct: 380  GQLLSLLFEDLFKTMNDEVRREFDAS----SKSSDL-LYHVKKSNRITVELQRTLSTGNW 434

Query: 2383 DLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2204
            D+KRF+MHRKGMT+VLARLS+I TLG+MTKI PQFEKSRKVSGPRALQPSQ+GM+CPCDT
Sbjct: 435  DIKRFRMHRKGMTEVLARLSYIGTLGYMTKIKPQFEKSRKVSGPRALQPSQFGMICPCDT 494

Query: 2203 PEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGL 2024
            PEGEACGLVKNLALMTHVTTDED  P++SLCY LGVEDLE LS  ELHT NS+L+I NGL
Sbjct: 495  PEGEACGLVKNLALMTHVTTDEDARPIMSLCYDLGVEDLEQLSAAELHTPNSYLIILNGL 554

Query: 2023 ILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGIS 1844
            ILGKH+ P+ FA  MRKLRRAG+I EFVS+FVN+KQCCVYIASDGGRVCRPLVIA+KG+S
Sbjct: 555  ILGKHKSPQRFANGMRKLRRAGRIREFVSIFVNDKQCCVYIASDGGRVCRPLVIAEKGVS 614

Query: 1843 RIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTI 1664
            RIKEHHM ELRDGVR FN FLR+GL+EYLDVNE+NN+LIALYE EA P+TTHIEIEPFTI
Sbjct: 615  RIKEHHMNELRDGVRDFNSFLRDGLIEYLDVNEENNSLIALYEKEATPDTTHIEIEPFTI 674

Query: 1663 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRT 1484
            LGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD L+Y+LVYPQRPLLTTRT
Sbjct: 675  LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYLLVYPQRPLLTTRT 734

Query: 1483 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYAN 1304
            IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK +AI QKY N
Sbjct: 735  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYAAICQKYKN 794

Query: 1303 NTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSLP 1124
             TSDR+I+PQR G EAE+MQILDDDGLASPGEIIR  DIYINK+SP  T   +TS M LP
Sbjct: 795  LTSDRLIKPQRQGSEAEKMQILDDDGLASPGEIIRNRDIYINKESPTVTITQVTSPMGLP 854

Query: 1123 DSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKG 944
            DSAYK++ QTYKG +GE  V+DRVAL SD++NNL  KF+IR TRRPEIGDKFSSRHGQKG
Sbjct: 855  DSAYKSSRQTYKGTEGEPTVIDRVALHSDENNNLSIKFMIRQTRRPEIGDKFSSRHGQKG 914

Query: 943  VCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFG 764
            VCGIIVQQEDLPFSERGI PDLIMNPHGFPSRMT+GKMIELLG KAGVS GRFHYGSAFG
Sbjct: 915  VCGIIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFG 974

Query: 763  EPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKM 584
            EPSGHAD V+AISETLVK GFSY+GKDF+YSG  G PLQAYIFMGPIYYQKLKHMVLDKM
Sbjct: 975  EPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKM 1034

Query: 583  HARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQ 410
            HAR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM+I ERLM+SSDPFE Q
Sbjct: 1035 HARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIHERLMLSSDPFEAQ 1092



 Score = 95.5 bits (236), Expect = 2e-16
 Identities = 42/51 (82%), Positives = 49/51 (96%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY+N+KLK GICS CKNG+N+ST++LPYACKLLFQELQSMN+VPRLKLTEA
Sbjct: 1101 GYYNYKLKIGICSMCKNGENMSTLKLPYACKLLFQELQSMNIVPRLKLTEA 1151


>ref|NP_199327.4| DNA-directed RNA polymerase RPC2 [Arabidopsis thaliana]
            gi|332007826|gb|AED95209.1| DNA-directed RNA polymerase
            RPC2 [Arabidopsis thaliana]
          Length = 1161

 Score = 1667 bits (4316), Expect = 0.0
 Identities = 826/1095 (75%), Positives = 948/1095 (86%), Gaps = 14/1095 (1%)
 Frame = -3

Query: 3652 SSGEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNL 3473
            ++ +  IDK+ LSAP+KS  DKFQL+PEFLKVRGLVKQHLDSFNYF+N GI KIV AN+ 
Sbjct: 11   TNDDHFIDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIHKIVKANSR 70

Query: 3472 ITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHD 3293
            ITS VDP +YL++K VR+GEPSI        + PHMCRL+D TYAAPI V+IEY +GSH 
Sbjct: 71   ITSTVDPSIYLRFKKVRVGEPSIINVNTVENINPHMCRLADMTYAAPIFVNIEYVHGSHG 130

Query: 3292 KKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQ 3113
             K    K+N++IGRMPIMLRSCRCVL+ KDE+ELARLGECPLDPGGYF++KGTEKV+LIQ
Sbjct: 131  NKAKSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFIIKGTEKVLLIQ 190

Query: 3112 EQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMK 2933
            EQLSKNRIII+SDKKG + ASVTSSTE TKSKTVI M+KEKIYL L+ F   IPI++++K
Sbjct: 191  EQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHRFVKKIPIIIVLK 250

Query: 2932 AMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASL 2753
            AMGMESDQE+VQMVGRDPR+ A LLPSI+EC +  + TQ+QAL++LE KVK+ ++     
Sbjct: 251  AMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKISYGTPP- 309

Query: 2752 EKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRL 2573
            EK+ RA+ ILRD+F+A+VPV   NFR KC YV VMLRRM+EA+LNKDAMDDKDYVGNKRL
Sbjct: 310  EKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRL 369

Query: 2572 ELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRD---IITHGLERA 2402
            ELSGQLISLLFEDLFKTM SE  KN D  L KP R+SR D +  L +D    I+ GLER 
Sbjct: 370  ELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERT 429

Query: 2401 ISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGM 2222
            +STGN+D+KRF+MHRKGMTQVL RLSFI ++G +TKISPQFEKSRKVSGPR+LQPSQWGM
Sbjct: 430  LSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPRSLQPSQWGM 489

Query: 2221 LCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFL 2042
            LCPCDTPEGE+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT +SFL
Sbjct: 490  LCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFL 549

Query: 2041 VIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVI 1862
            VI NGLILGKH RP++FA ++R+LRRAGKIGEFVSVF NEKQ CVY+ASD GRVCRPLVI
Sbjct: 550  VILNGLILGKHSRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDVGRVCRPLVI 609

Query: 1861 ADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGE--------- 1709
            ADKGISR+K+HHMKEL+DGVRTF+DF+R+GL+EYLDVNE+NNALIALYE +         
Sbjct: 610  ADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDGTTELDEGA 669

Query: 1708 --AEPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDT 1535
              A+ +TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDT
Sbjct: 670  EAAKADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDT 729

Query: 1534 LIYMLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1355
            L+Y+LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS+SGYDIEDAIVMNKSSLDRGFG
Sbjct: 730  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSFSGYDIEDAIVMNKSSLDRGFG 789

Query: 1354 RCIVMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINK 1175
            RCIVMKK+ A++QKY N T+DRI+ PQR G +AE+MQILDDDGLA+PGEIIRP+DIYINK
Sbjct: 790  RCIVMKKIVAMSQKYDNCTADRILIPQRTGPDAEKMQILDDDGLATPGEIIRPNDIYINK 849

Query: 1174 QSPINTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHT 995
            Q P++T    TS++S  DS Y+ A + +KGP+GET VVDRVAL SDK   LC K+IIRHT
Sbjct: 850  QVPVDTVTKFTSALS--DSQYRPAREYFKGPEGETQVVDRVALCSDKKGQLCIKYIIRHT 907

Query: 994  RRPEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLG 815
            RRPE+GDKFSSRHGQKGVCGII+QQED PFSE GI PDLIMNPHGFPSRMT+GKMIELLG
Sbjct: 908  RRPELGDKFSSRHGQKGVCGIIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLG 967

Query: 814  GKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIF 635
             KAGVS GRFHYGSAFGE SGHAD+VE IS TLV+KGFSYSGKD LYSG  G P++AYIF
Sbjct: 968  SKAGVSCGRFHYGSAFGERSGHADKVETISATLVEKGFSYSGKDLLYSGISGEPVEAYIF 1027

Query: 634  MGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMM 455
            MGPIYYQKLKHMVLDKMHAR  GPRVM+TRQPTEG+S++GGLR+GEMERDCLIAYGASM+
Sbjct: 1028 MGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASML 1087

Query: 454  IFERLMISSDPFEVQ 410
            I+ERLMISSDPFEVQ
Sbjct: 1088 IYERLMISSDPFEVQ 1102



 Score = 97.1 bits (240), Expect = 6e-17
 Identities = 43/51 (84%), Positives = 49/51 (96%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255
            GY+N+KLK  +C+TCKNGDNI+TM+LPYACKLLFQELQSMNVVPRLKLTEA
Sbjct: 1111 GYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQELQSMNVVPRLKLTEA 1161


>dbj|BAB11387.1| DNA-directed RNA polymerase subunit [Arabidopsis thaliana]
          Length = 1194

 Score = 1665 bits (4313), Expect = 0.0
 Identities = 822/1084 (75%), Positives = 944/1084 (87%), Gaps = 3/1084 (0%)
 Frame = -3

Query: 3652 SSGEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNL 3473
            ++ +  IDK+ LSAP+KS  DKFQL+PEFLKVRGLVKQHLDSFNYF+N GI KIV AN+ 
Sbjct: 32   TNDDHFIDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIHKIVKANSR 91

Query: 3472 ITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHD 3293
            ITS VDP +YL++K VR+GEPSI        + PHMCRL+D TYAAPI V+IEY +GSH 
Sbjct: 92   ITSTVDPSIYLRFKKVRVGEPSIINVNTVENINPHMCRLADMTYAAPIFVNIEYVHGSHG 151

Query: 3292 KKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQ 3113
             K    K+N++IGRMPIMLRSCRCVL+ KDE+ELARLGECPLDPGGYF++KGTEKV+LIQ
Sbjct: 152  NKAKSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFIIKGTEKVLLIQ 211

Query: 3112 EQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMK 2933
            EQLSKNRIII+SDKKG + ASVTSSTE TKSKTVI M+KEKIYL L+ F   IPI++++K
Sbjct: 212  EQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHRFVKKIPIIIVLK 271

Query: 2932 AMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASL 2753
            AMGMESDQE+VQMVGRDPR+ A LLPSI+EC +  + TQ+QAL++LE KVK+ ++     
Sbjct: 272  AMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKISYGTPP- 330

Query: 2752 EKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRL 2573
            EK+ RA+ ILRD+F+A+VPV   NFR KC YV VMLRRM+EA+LNKDAMDDKDYVGNKRL
Sbjct: 331  EKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRL 390

Query: 2572 ELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDI---ITHGLERA 2402
            ELSGQLISLLFEDLFKTM SE  KN D  L KP R+SR D +  L +D    I+ GLER 
Sbjct: 391  ELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERT 450

Query: 2401 ISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGM 2222
            +STGN+D+KRF+MHRKGMTQVL RLSFI ++G +TKISPQFEKSRKVSGPR+LQPSQWGM
Sbjct: 451  LSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPRSLQPSQWGM 510

Query: 2221 LCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFL 2042
            LCPCDTPEGE+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT +SFL
Sbjct: 511  LCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFL 570

Query: 2041 VIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVI 1862
            VI NGLILGKH RP++FA ++R+LRRAGKIGEFVSVF NEKQ CVY+ASD GRVCRPLVI
Sbjct: 571  VILNGLILGKHSRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDVGRVCRPLVI 630

Query: 1861 ADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIE 1682
            ADKGISR+K+HHMKEL+DGVRTF+DF+R+GL+EYLDVNE+NNAL+ L    A+ +TTHIE
Sbjct: 631  ADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALVCLRAEAAKADTTHIE 690

Query: 1681 IEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRP 1502
            IEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y+LVYPQRP
Sbjct: 691  IEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLYLLVYPQRP 750

Query: 1501 LLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAI 1322
            LLTTRTIELVGYDKLGAGQNATVAVMS+SGYDIEDAIVMNKSSLDRGFGRCIVMKK+ A+
Sbjct: 751  LLTTRTIELVGYDKLGAGQNATVAVMSFSGYDIEDAIVMNKSSLDRGFGRCIVMKKIVAM 810

Query: 1321 NQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTIT 1142
            +QKY N T+DRI+ PQR G +AE+MQILDDDGLA+PGEIIRP+DIYINKQ P++T    T
Sbjct: 811  SQKYDNCTADRILIPQRTGPDAEKMQILDDDGLATPGEIIRPNDIYINKQVPVDTVTKFT 870

Query: 1141 SSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSS 962
            S++S  DS Y+ A + +KGP+GET VVDRVAL SDK   LC K+IIRHTRRPE+GDKFSS
Sbjct: 871  SALS--DSQYRPAREYFKGPEGETQVVDRVALCSDKKGQLCIKYIIRHTRRPELGDKFSS 928

Query: 961  RHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFH 782
            RHGQKGVCGII+QQED PFSE GI PDLIMNPHGFPSRMT+GKMIELLG KAGVS GRFH
Sbjct: 929  RHGQKGVCGIIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFH 988

Query: 781  YGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKH 602
            YGSAFGE SGHAD+VE IS TLV+KGFSYSGKD LYSG  G P++AYIFMGPIYYQKLKH
Sbjct: 989  YGSAFGERSGHADKVETISATLVEKGFSYSGKDLLYSGISGEPVEAYIFMGPIYYQKLKH 1048

Query: 601  MVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDP 422
            MVLDKMHAR  GPRVM+TRQPTEG+S++GGLR+GEMERDCLIAYGASM+I+ERLMISSDP
Sbjct: 1049 MVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMISSDP 1108

Query: 421  FEVQ 410
            FEVQ
Sbjct: 1109 FEVQ 1112



 Score = 69.3 bits (168), Expect = 1e-08
 Identities = 30/49 (61%), Positives = 43/49 (87%)
 Frame = -2

Query: 407  GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLT 261
            GY+N+KLK  +C+TCKNGDNI+TM+LPYACKLLFQ ++++ +  +LKL+
Sbjct: 1121 GYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ-VKTIGLFFKLKLS 1168