BLASTX nr result
ID: Akebia25_contig00007233
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia25_contig00007233 (3759 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s... 1810 0.0 ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob... 1802 0.0 ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theob... 1788 0.0 ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr... 1788 0.0 ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s... 1787 0.0 ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s... 1753 0.0 ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III s... 1748 0.0 ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s... 1738 0.0 ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put... 1731 0.0 ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III s... 1697 0.0 ref|XP_006279912.1| hypothetical protein CARUB_v10025768mg [Caps... 1686 0.0 ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutr... 1677 0.0 ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phas... 1674 0.0 ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III s... 1672 0.0 ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arab... 1669 0.0 ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s... 1669 0.0 ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III s... 1667 0.0 ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III s... 1667 0.0 ref|NP_199327.4| DNA-directed RNA polymerase RPC2 [Arabidopsis t... 1667 0.0 dbj|BAB11387.1| DNA-directed RNA polymerase subunit [Arabidopsis... 1665 0.0 >ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis vinifera] Length = 1142 Score = 1810 bits (4689), Expect = 0.0 Identities = 899/1102 (81%), Positives = 992/1102 (90%), Gaps = 4/1102 (0%) Frame = -3 Query: 3637 SIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDV 3458 SI K F + PVK VDKF LLPEFLKVRGLVKQHLDSFNYFV T IKKIV AN+ I S V Sbjct: 5 SIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSSV 64 Query: 3457 DPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVM 3278 DP +YL++KDVRIGEPSIT D + L PH CRLSD TYAAPI+V+IEY GSH +K + Sbjct: 65 DPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQKTRV 124 Query: 3277 TKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 3098 KN++VIGRMPIMLRSC CVL +KDE ELARLGECPLDPGGYFVVKGTEKVILIQEQLSK Sbjct: 125 EKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 184 Query: 3097 NRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGME 2918 NRIII++DKKG + ASVTSSTE+TKSKTVIVM+KEKI+LQLN FT+ IPIM++MKAMGME Sbjct: 185 NRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMGME 244 Query: 2917 SDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPR 2738 SDQEVVQMVGR+PRY ALLLPS++ECA+ IYTQ+QALEFLE+KVK+ F N SLEKE R Sbjct: 245 SDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLEKEGR 304 Query: 2737 AMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQ 2558 M ILRD F+ANVPVRQ NFRPKC+YVAVMLRRMM+AILNKDAMDDKDYVGNKRLELSGQ Sbjct: 305 GMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSGQ 364 Query: 2557 LISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAH---YLMRDIITHGLERAISTGN 2387 LISLLFEDLFKTM SE+KK D LAKPSRSSR D + +++RD IT GLER +STGN Sbjct: 365 LISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLSTGN 424 Query: 2386 WDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD 2207 WD+KRF+MHRKGM+QV+ARLS+I +LGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD Sbjct: 425 WDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD 484 Query: 2206 TPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNG 2027 TPEGEACGLVKNLALMTHVTTDE+E+PLISLCYSLGVEDLELLSGEELHT NSFL+IFNG Sbjct: 485 TPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLIIFNG 544 Query: 2026 LILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGI 1847 LILGKHRRP+ FA A+RKLRRAGKIGEFVSVFVNEKQ CVYIASDGGRVCRP+VIADKG Sbjct: 545 LILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIADKGK 604 Query: 1846 SRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFT 1667 SRIKEHHMKEL DGVRTF+DFLR+GL+EYLDVNE+NNALIALYE +A+PETTHIEIEPFT Sbjct: 605 SRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIEIEPFT 664 Query: 1666 ILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTR 1487 ILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+L+Y+LVYPQRPLLTTR Sbjct: 665 ILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTTR 724 Query: 1486 TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYA 1307 TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK SA+NQ+Y Sbjct: 725 TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVNQRYE 784 Query: 1306 NNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSL 1127 NN SDRI+RP +VG +AERMQILDDDGLA+PGEII+P+DIYINK+SPI T+ + S + L Sbjct: 785 NNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLISPVGL 844 Query: 1126 PDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQK 947 PDSAYK + QT+KGP+GE +VVDRVAL SDK++NLC KF+IRHTRRPE+GDKFSSRHGQK Sbjct: 845 PDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRHGQK 904 Query: 946 GVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAF 767 GVCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAF Sbjct: 905 GVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAF 964 Query: 766 GEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDK 587 GEPSGHAD+VE IS+TLVK GFSYSGKDF+YSG G PLQAYIFMGPIYYQKLKHMVLDK Sbjct: 965 GEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDK 1024 Query: 586 MHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQE 407 MHAR GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLM+SSDPFEVQ Sbjct: 1025 MHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQ- 1083 Query: 406 DISTISSKLAFVPH-AKMGITS 344 + + L + H K+GI S Sbjct: 1084 -VCRVCGLLGYYNHKLKIGICS 1104 Score = 103 bits (256), Expect = 8e-19 Identities = 47/51 (92%), Positives = 50/51 (98%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY+NHKLK GICSTCKNGDNISTM+LPYACKLLFQELQ+MNVVPRLKLTEA Sbjct: 1092 GYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLTEA 1142 >ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao] gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao] Length = 1158 Score = 1802 bits (4668), Expect = 0.0 Identities = 895/1088 (82%), Positives = 979/1088 (89%), Gaps = 1/1088 (0%) Frame = -3 Query: 3670 NNQSMGSSGEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI 3491 NN + + E +DKQ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI Sbjct: 12 NNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI 71 Query: 3490 VAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEY 3311 V AN+ I S VDP +YL++KDVRIGEPS+T + + + PH CRLSD TYAAPI V+IEY Sbjct: 72 VRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEY 131 Query: 3310 TNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTE 3131 GSH +K + KN++VIGRMPIMLRSC CVL KDE ELARLGECPLDPGGYFV+KG E Sbjct: 132 IQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAE 191 Query: 3130 KVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIP 2951 KVILIQEQLSKNRIII++DKKG + ASVTSS+EATKSKTVI M+KEKIYL LN F IP Sbjct: 192 KVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIP 251 Query: 2950 IMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFT 2771 IMV+MKAMGMESDQEVVQMVGRDP Y A+LLPSI+ECA IYTQEQALE+LE KVKR Sbjct: 252 IMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVM 311 Query: 2770 FSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDY 2591 ++ + EKE RA+ ILRDVF+ANVPVR NFRPKC+YVAVMLRRM+EAILNKDAMDDKDY Sbjct: 312 YTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDY 371 Query: 2590 VGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLM-RDIITHG 2414 VGNKRLELSGQLISLLFEDLFKT SE++K DL L+KPSRSS LD + +L R+ IT G Sbjct: 372 VGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFG 431 Query: 2413 LERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPS 2234 LER +STGN+D+KRFKMHRKGMTQVLARLSFI TLG+MTK+SPQFEKSRKVSGPRALQPS Sbjct: 432 LERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPS 491 Query: 2233 QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTS 2054 QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE PLISLCY LGVEDLELLSGEELHT Sbjct: 492 QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTP 551 Query: 2053 NSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCR 1874 NSFLVI NGLILGKHRRP+HFA AMRKLRRAGK+GEFVSVFVNEKQ CVYIASDGGRVCR Sbjct: 552 NSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCR 611 Query: 1873 PLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPET 1694 PLVIADKG+SRIKEHHMKEL DGVRTF+DFLR+GL+EYLDVNE+NNALIALYEGEA PET Sbjct: 612 PLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPET 671 Query: 1693 THIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVY 1514 THIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y+LVY Sbjct: 672 THIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVY 731 Query: 1513 PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK 1334 PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+ Sbjct: 732 PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKR 791 Query: 1333 LSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTR 1154 SA+NQKY SDRI+RPQR G +ERMQILDDDG+A+PGEIIRP+DIYINK+S I+TR Sbjct: 792 YSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTR 851 Query: 1153 DTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGD 974 + SS SLPDSAY+ A QTYKGP+GE+ VVDRVAL +D+++NL KF+IRHTRRPE+GD Sbjct: 852 GSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGD 911 Query: 973 KFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSS 794 KFSSRHGQKGVCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS Sbjct: 912 KFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSC 971 Query: 793 GRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQ 614 GRFHYGSAFGEPSGHADRVEAISETL+K GFSY+GKDF+YSG G PLQAYIFMGPIYYQ Sbjct: 972 GRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQ 1031 Query: 613 KLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMI 434 KLKHMVLDKMHAR GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMI Sbjct: 1032 KLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMI 1091 Query: 433 SSDPFEVQ 410 SSDPFEVQ Sbjct: 1092 SSDPFEVQ 1099 Score = 98.6 bits (244), Expect = 2e-17 Identities = 43/51 (84%), Positives = 50/51 (98%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY++HKLKTGICS+CKNGDN+STM+LPYACKLL QELQSMN+VPRLKL+EA Sbjct: 1108 GYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLSEA 1158 >ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao] gi|508727714|gb|EOY19611.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao] Length = 1153 Score = 1788 bits (4631), Expect = 0.0 Identities = 890/1088 (81%), Positives = 974/1088 (89%), Gaps = 1/1088 (0%) Frame = -3 Query: 3670 NNQSMGSSGEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI 3491 NN + + E +DKQ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI Sbjct: 12 NNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI 71 Query: 3490 VAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEY 3311 V AN+ I S VDP +YL++KDVRIGEPS+T + + + PH CRLSD TYAAPI V+IEY Sbjct: 72 VRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEY 131 Query: 3310 TNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTE 3131 GSH +K + KN++VIGRMPIMLRSC CVL KDE ELARLGECPLDPGGYFV+KG E Sbjct: 132 IQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAE 191 Query: 3130 KVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIP 2951 K EQLSKNRIII++DKKG + ASVTSS+EATKSKTVI M+KEKIYL LN F IP Sbjct: 192 K-----EQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIP 246 Query: 2950 IMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFT 2771 IMV+MKAMGMESDQEVVQMVGRDP Y A+LLPSI+ECA IYTQEQALE+LE KVKR Sbjct: 247 IMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVM 306 Query: 2770 FSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDY 2591 ++ + EKE RA+ ILRDVF+ANVPVR NFRPKC+YVAVMLRRM+EAILNKDAMDDKDY Sbjct: 307 YTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDY 366 Query: 2590 VGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLM-RDIITHG 2414 VGNKRLELSGQLISLLFEDLFKT SE++K DL L+KPSRSS LD + +L R+ IT G Sbjct: 367 VGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFG 426 Query: 2413 LERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPS 2234 LER +STGN+D+KRFKMHRKGMTQVLARLSFI TLG+MTK+SPQFEKSRKVSGPRALQPS Sbjct: 427 LERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPS 486 Query: 2233 QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTS 2054 QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE PLISLCY LGVEDLELLSGEELHT Sbjct: 487 QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTP 546 Query: 2053 NSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCR 1874 NSFLVI NGLILGKHRRP+HFA AMRKLRRAGK+GEFVSVFVNEKQ CVYIASDGGRVCR Sbjct: 547 NSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCR 606 Query: 1873 PLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPET 1694 PLVIADKG+SRIKEHHMKEL DGVRTF+DFLR+GL+EYLDVNE+NNALIALYEGEA PET Sbjct: 607 PLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPET 666 Query: 1693 THIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVY 1514 THIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y+LVY Sbjct: 667 THIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVY 726 Query: 1513 PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK 1334 PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+ Sbjct: 727 PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKR 786 Query: 1333 LSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTR 1154 SA+NQKY SDRI+RPQR G +ERMQILDDDG+A+PGEIIRP+DIYINK+S I+TR Sbjct: 787 YSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTR 846 Query: 1153 DTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGD 974 + SS SLPDSAY+ A QTYKGP+GE+ VVDRVAL +D+++NL KF+IRHTRRPE+GD Sbjct: 847 GSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGD 906 Query: 973 KFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSS 794 KFSSRHGQKGVCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS Sbjct: 907 KFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSC 966 Query: 793 GRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQ 614 GRFHYGSAFGEPSGHADRVEAISETL+K GFSY+GKDF+YSG G PLQAYIFMGPIYYQ Sbjct: 967 GRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQ 1026 Query: 613 KLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMI 434 KLKHMVLDKMHAR GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMI Sbjct: 1027 KLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMI 1086 Query: 433 SSDPFEVQ 410 SSDPFEVQ Sbjct: 1087 SSDPFEVQ 1094 Score = 98.6 bits (244), Expect = 2e-17 Identities = 43/51 (84%), Positives = 50/51 (98%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY++HKLKTGICS+CKNGDN+STM+LPYACKLL QELQSMN+VPRLKL+EA Sbjct: 1103 GYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLSEA 1153 >ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina] gi|557534507|gb|ESR45625.1| hypothetical protein CICLE_v10000078mg [Citrus clementina] Length = 1149 Score = 1788 bits (4630), Expect = 0.0 Identities = 888/1111 (79%), Positives = 986/1111 (88%), Gaps = 1/1111 (0%) Frame = -3 Query: 3643 EESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITS 3464 E+ DKQ L+APVKS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGI+KIV AN+ I S Sbjct: 13 EQLPDKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVS 72 Query: 3463 DVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKN 3284 +DP ++L++KDVRIG+PS+T D + L PHMCRLSD TYAAPI+V+IEY GSH +K Sbjct: 73 GIDPSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKT 132 Query: 3283 VMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQL 3104 M KN++VIGR+PIMLRSCRCVL KDE ELARLGECPLDPGGYF++KGTEKV+LIQEQL Sbjct: 133 TMEKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQL 192 Query: 3103 SKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMG 2924 SKNR+II++DKKG + ASVTSSTE KSKTVI M+K K+YL LN F IPIMV+MKAMG Sbjct: 193 SKNRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMG 252 Query: 2923 MESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKE 2744 MESDQEVVQMVGRDPRY ALLLPSI+ECA +IYTQE+ALE+LE KVKR TF + ++E Sbjct: 253 MESDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDRE 312 Query: 2743 PRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELS 2564 RA ILRDVF+ANVPV NFRPKC YVAVMLRRM+EA+LNKDAMDDKDYVGNKRLELS Sbjct: 313 GRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELS 372 Query: 2563 GQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNW 2384 GQL+SLLFEDLFKTM SE++K D+ L+KPSRSSR D++ +++RD IT GLER +STGN+ Sbjct: 373 GQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNF 432 Query: 2383 DLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2204 D+KRFKMHRKGMTQVLARLSFI TLGHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDT Sbjct: 433 DVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 492 Query: 2203 PEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGL 2024 PEGEACGLVKNLALMTHVTTDE+E PLISLCY LGVEDLELLSGEELH NSFLVIFNGL Sbjct: 493 PEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGL 552 Query: 2023 ILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGIS 1844 ILGKHRRPK FA MRKLRRAGKIGEFVSVFVNEKQ CVYIASDGGRVCRPLVIADKGIS Sbjct: 553 ILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGIS 612 Query: 1843 RIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTI 1664 RIKEHHMKEL DGVR+F+DFLREGL+EYLDVNE+NNALIALYEG+A P+TTHIEIEPFTI Sbjct: 613 RIKEHHMKELSDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTI 672 Query: 1663 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRT 1484 LGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLTTRT Sbjct: 673 LGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRT 732 Query: 1483 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYAN 1304 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK +AINQKYAN Sbjct: 733 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYAN 792 Query: 1303 NTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSLP 1124 +TSDRI+RP R G +ERMQILDDDGLA+PGEII+P+D+YINK+SP+ TR +I S Sbjct: 793 STSDRILRPDRTGPGSERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQT 852 Query: 1123 DSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKG 944 DS Y++A QTYKGP GET VVDRVAL SDK+ +LC KF+IRHTRRPE+GDKFSSRHGQKG Sbjct: 853 DSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKG 912 Query: 943 VCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFG 764 VCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAFG Sbjct: 913 VCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFG 972 Query: 763 EPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKM 584 EPSGHAD VE+ISETLVK GFSY+GKD +YSG G PLQAYIFMGPIYYQKLKHMVLDKM Sbjct: 973 EPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKM 1032 Query: 583 HARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQED 404 HAR GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLM+SSDPFEVQ Sbjct: 1033 HARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQ-- 1090 Query: 403 ISTISSKLAFVPH-AKMGITSLPCNCHMLAS 314 + + L + H K GI S N + ++S Sbjct: 1091 VCRVCGLLGYYNHKLKAGICSTCKNGNNISS 1121 Score = 96.7 bits (239), Expect = 7e-17 Identities = 43/51 (84%), Positives = 48/51 (94%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY+NHKLK GICSTCKNG+NIS+M+LPYACKLL QELQSMN+VPRLKL EA Sbjct: 1099 GYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149 >ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform X1 [Citrus sinensis] gi|568883651|ref|XP_006494573.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform X2 [Citrus sinensis] Length = 1149 Score = 1787 bits (4629), Expect = 0.0 Identities = 889/1109 (80%), Positives = 985/1109 (88%), Gaps = 2/1109 (0%) Frame = -3 Query: 3664 QSMGSSGEESI-DKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIV 3488 Q GS +E + DKQ L+APVKS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGI+KIV Sbjct: 5 QVEGSPKDEQLPDKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIV 64 Query: 3487 AANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYT 3308 AN+ I S +DP ++L++KDVRIG+PS+T D + L PHMCRLSD TYAAPI+V+IEY Sbjct: 65 RANDRIVSGIDPSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYV 124 Query: 3307 NGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEK 3128 GSH +K M KN++VIGR+PIMLRSCRCVL KDE ELARLGECPLDPGGYF++KGTEK Sbjct: 125 QGSHTEKTTMEKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEK 184 Query: 3127 VILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPI 2948 V+LIQEQLSKNR+II++DKKG + ASVTSSTE KSKTVI M+K K+YL LN F IPI Sbjct: 185 VLLIQEQLSKNRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPI 244 Query: 2947 MVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTF 2768 MV+MKAMG+ESDQEVVQMVGRDPRY ALLLPSI+ECA +IYTQE+ALE+LE KVKR TF Sbjct: 245 MVVMKAMGIESDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTF 304 Query: 2767 SNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYV 2588 + ++E RA ILRDVF+ANVPV NFRPKC YVAVMLRRM+EA+LNKDAMDDKDYV Sbjct: 305 GSPPNDREGRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYV 364 Query: 2587 GNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLE 2408 GNKRLELSGQL+SLLFEDLFKTM SE++K D+ L+KPSRSSR D++ +++RD IT GLE Sbjct: 365 GNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLE 424 Query: 2407 RAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQW 2228 R +STGN+D+KRFKMHRKGMTQVLARLSFI TLGHMT++SPQFEKSRKVSGPRALQPSQW Sbjct: 425 RTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQW 484 Query: 2227 GMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNS 2048 GMLCPCDTPEGEACGLVKNLALMTHVTTDE+E PLISLCY LGVEDLELLSGEELH NS Sbjct: 485 GMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNS 544 Query: 2047 FLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPL 1868 FLVIFNGLILGKHRRPK FA MRKLRRAGKIGEFVSVFVNEKQ CVYIASDGGRVCRPL Sbjct: 545 FLVIFNGLILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPL 604 Query: 1867 VIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTH 1688 VIADKGISRIKEHHMKEL DGVR+F+DFLREGL+EYLDVNE+NNALIALYEG+A P+TTH Sbjct: 605 VIADKGISRIKEHHMKELLDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTH 664 Query: 1687 IEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQ 1508 IEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQ Sbjct: 665 IEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQ 724 Query: 1507 RPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLS 1328 RPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK + Sbjct: 725 RPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYT 784 Query: 1327 AINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDT 1148 AINQKYAN+TSDRI+RP R G AERMQILDDDGLA+PGEII+P+D+YINK+SP+ TR + Sbjct: 785 AINQKYANSTSDRILRPDRTGPGAERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGS 844 Query: 1147 ITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKF 968 I S DS Y++A QTYKGP GET VVDRVAL SDK+ +LC KF+IRHTRRPE+GDKF Sbjct: 845 IMSPTGQTDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKF 904 Query: 967 SSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGR 788 SSRHGQKGVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GR Sbjct: 905 SSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGR 964 Query: 787 FHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKL 608 FHYGSAFGEPSGHAD VE+ISETLVK GFSY+GKD +YSG G PLQAYIFMGPIYYQKL Sbjct: 965 FHYGSAFGEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKL 1024 Query: 607 KHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISS 428 KHMVLDKMHAR GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLM+SS Sbjct: 1025 KHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSS 1084 Query: 427 DPFEVQEDISTISSKLAFVPH-AKMGITS 344 DPFEVQ + + L + H K GI S Sbjct: 1085 DPFEVQ--VCRVCGLLGYYNHKLKAGICS 1111 Score = 98.6 bits (244), Expect = 2e-17 Identities = 44/51 (86%), Positives = 48/51 (94%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY+NHKLK GICSTCKNGDNIS+M+LPYACKLL QELQSMN+VPRLKL EA Sbjct: 1099 GYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149 >ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform X1 [Solanum tuberosum] gi|565393087|ref|XP_006362215.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform X2 [Solanum tuberosum] Length = 1153 Score = 1753 bits (4540), Expect = 0.0 Identities = 869/1091 (79%), Positives = 967/1091 (88%), Gaps = 5/1091 (0%) Frame = -3 Query: 3667 NQSMGSSGEES---IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIK 3497 + +M ++ E+S IDKQ L++P+K+ VDK+QL+PEFLKVRGLVKQHLDSFNYFV T IK Sbjct: 4 DSTMSNTTEDSNQGIDKQHLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIK 63 Query: 3496 KIVAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSI 3317 KIV AN I S +DP +YL+Y+DV IGEPS+ D T L P CRLSD TYAAPI V+I Sbjct: 64 KIVRANQEIRSILDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTI 123 Query: 3316 EYTNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKG 3137 EYT GSH + +V TK N++IGRMPIMLRS CVL KDEDELARLGECPLDPGGYFV+KG Sbjct: 124 EYTTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKG 183 Query: 3136 TEKVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAM 2957 TEKVILIQEQLSKNRIII++DKKG + ASVTSSTE TKSKT+I M+KEK+YL+LN F Sbjct: 184 TEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTK 243 Query: 2956 IPIMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLE--KKV 2783 +PIMV+MKAMGMESDQEVVQM+GRDPR+ ALLLPSI+ECA +YTQ QALEFLE K + Sbjct: 244 VPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQHQALEFLESDKML 303 Query: 2782 KRFTFSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMD 2603 K ++S +EK RA+ ILRD+F+ANVPV Q NFR KCIYVAVM+RRMMEAILNKDAMD Sbjct: 304 KMPSYSTGPVEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMD 363 Query: 2602 DKDYVGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDII 2423 DKDYVGNKRLELSGQL+SLLFEDLFKTMN E ++ D LA+PSRSSRLDI+ Y+++D I Sbjct: 364 DKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIVKDSI 423 Query: 2422 THGLERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRAL 2243 T GLER +STGNWD+KRF+MHRKGMTQV+ARLS+I +LGHMTKISPQFEKSRKVSGPRAL Sbjct: 424 TMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRAL 483 Query: 2242 QPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEEL 2063 QPSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P++SLCY LGVEDLE LS EEL Sbjct: 484 QPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEEL 543 Query: 2062 HTSNSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGR 1883 H S+L+ NGLILGKH+ P+ FA AMR+LRRAGKIGEFVS+FVNEKQ CVYIASDGGR Sbjct: 544 HMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKIGEFVSIFVNEKQRCVYIASDGGR 603 Query: 1882 VCRPLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAE 1703 VCRPLVIADKG+SRIKEHHM+ELRDGVR F+ FL++GL+EYLDVNE+NN LIALYE EA Sbjct: 604 VCRPLVIADKGVSRIKEHHMRELRDGVRDFDSFLKDGLIEYLDVNEENNTLIALYEKEAT 663 Query: 1702 PETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYM 1523 PETTHIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD L+Y+ Sbjct: 664 PETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYL 723 Query: 1522 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1343 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV Sbjct: 724 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 783 Query: 1342 MKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPI 1163 MKK SAI QKY N TSDRII+PQR G EA++MQILDDDG+A+PGE IR HDIYINK+SP Sbjct: 784 MKKYSAICQKYENGTSDRIIKPQRQGFEADKMQILDDDGMAAPGETIRNHDIYINKESPT 843 Query: 1162 NTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPE 983 TR ITS M LPDSAYKT+ QTYKGP+GETAVVDRVAL+SD++NNL KF+IRHTRRPE Sbjct: 844 VTRTPITSPMGLPDSAYKTSRQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPE 903 Query: 982 IGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAG 803 IGDKFSSRHGQKGVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLG KAG Sbjct: 904 IGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 963 Query: 802 VSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPI 623 VS GRFHYGSAFGEPSGHAD V++ISETLVK GFSY+GKDF+YSG G PLQAYIFMGPI Sbjct: 964 VSCGRFHYGSAFGEPSGHADTVDSISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPI 1023 Query: 622 YYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFER 443 YYQKLKHMVLDKMHAR GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM+I+ER Sbjct: 1024 YYQKLKHMVLDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 1083 Query: 442 LMISSDPFEVQ 410 LMISSDPFEVQ Sbjct: 1084 LMISSDPFEVQ 1094 Score = 98.2 bits (243), Expect = 3e-17 Identities = 44/51 (86%), Positives = 49/51 (96%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY+N+KLKTGICS CKNG+NISTM+LPYACKLLFQELQSMN+VPRLKL EA Sbjct: 1103 GYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMNIVPRLKLAEA 1153 >ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum lycopersicum] Length = 1183 Score = 1748 bits (4526), Expect = 0.0 Identities = 863/1091 (79%), Positives = 967/1091 (88%), Gaps = 5/1091 (0%) Frame = -3 Query: 3667 NQSMGSSGEES---IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIK 3497 + +M ++ E+S IDKQ L++ +K+ VDK+QL+PEFLKVRGLVKQHLDSFNYFV T IK Sbjct: 34 DSTMSNTTEDSNQGIDKQHLASHIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIK 93 Query: 3496 KIVAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSI 3317 KIV AN I S +DP +YL+Y+DV IGEPS+ D T L P CRLSD TYAAPI V+I Sbjct: 94 KIVRANQEIRSTLDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTI 153 Query: 3316 EYTNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKG 3137 +YT GSH + +V TK N++IGRMPIMLRS CVL KDEDELARLGECPLDPGGYFV+KG Sbjct: 154 DYTTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKG 213 Query: 3136 TEKVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAM 2957 TEKVILIQEQLSKNRIII++DKKG + ASVTSSTE TKSKT+I M+KEK+YL+LN F Sbjct: 214 TEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTK 273 Query: 2956 IPIMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLE--KKV 2783 +PIMV+MKAMGMESDQEVVQM+GRDPR+ ALLLPSI+ECA +YTQ+QALEFLE K + Sbjct: 274 VPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQQQALEFLESDKML 333 Query: 2782 KRFTFSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMD 2603 K ++S +EK RA+ ILRD+F+ANVPV Q NFR KCIYVAVM+RRMMEAILNKDAMD Sbjct: 334 KMPSYSTGPIEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMD 393 Query: 2602 DKDYVGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDII 2423 DKDYVGNKRLELSGQL+SLLFEDLFKTMN E ++ D LA+PSRSSRLDI+ Y+++D I Sbjct: 394 DKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIIKDSI 453 Query: 2422 THGLERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRAL 2243 T GLER +STGNWD+KRF+MHRKGMTQV+ARLS+I +LGHMTKISPQFEKSRKVSGPRAL Sbjct: 454 TMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRAL 513 Query: 2242 QPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEEL 2063 QPSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P++SLCY LGVEDLE LS EEL Sbjct: 514 QPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEEL 573 Query: 2062 HTSNSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGR 1883 H S+L+ NGLILGKH+ P+ FA AMR+LRRAGK+GEFVS+FVNEKQ CVYIASDGGR Sbjct: 574 HMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKVGEFVSIFVNEKQRCVYIASDGGR 633 Query: 1882 VCRPLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAE 1703 VCRPLVIADKG+SRIKEHHM+ELRDG+R F+ FL++GL+EYLDVNE+NN LIALYE EA Sbjct: 634 VCRPLVIADKGVSRIKEHHMRELRDGLRDFDSFLKDGLIEYLDVNEENNTLIALYEKEAT 693 Query: 1702 PETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYM 1523 PETTHIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD L+Y+ Sbjct: 694 PETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYL 753 Query: 1522 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1343 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV Sbjct: 754 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 813 Query: 1342 MKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPI 1163 MKK SAI QKY N TSDRII+PQR G EA+RMQILDDDG+A+PGE IR HDIYINK+SP Sbjct: 814 MKKYSAICQKYENGTSDRIIKPQRQGPEADRMQILDDDGMAAPGETIRNHDIYINKESPT 873 Query: 1162 NTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPE 983 TR +TS M LPDSAYK++ QTYKGP+GETAVVDRVAL+SD++NNL KF+IRHTRRPE Sbjct: 874 VTRTPVTSPMGLPDSAYKSSKQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPE 933 Query: 982 IGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAG 803 +GDKFSSRHGQKGVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLG KAG Sbjct: 934 LGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 993 Query: 802 VSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPI 623 VS GRFHYGSAFGEPSGHAD V+AISETLVK GFSY+GKDF+YSG G PLQAYIFMGPI Sbjct: 994 VSCGRFHYGSAFGEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPI 1053 Query: 622 YYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFER 443 YYQKLKHMV+DKMHAR GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM+I+ER Sbjct: 1054 YYQKLKHMVVDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 1113 Query: 442 LMISSDPFEVQ 410 LMISSDPFEVQ Sbjct: 1114 LMISSDPFEVQ 1124 Score = 98.2 bits (243), Expect = 3e-17 Identities = 44/51 (86%), Positives = 49/51 (96%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY+N+KLKTGICS CKNG+NISTM+LPYACKLLFQELQSMN+VPRLKL EA Sbjct: 1133 GYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMNIVPRLKLAEA 1183 >ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis sativus] Length = 1158 Score = 1738 bits (4502), Expect = 0.0 Identities = 871/1115 (78%), Positives = 972/1115 (87%), Gaps = 5/1115 (0%) Frame = -3 Query: 3673 TNNQSMGSSG---EESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTG 3503 + N+ +G + + IDKQF+ P+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNT Sbjct: 10 SKNEKLGDNSNPIDSDIDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTE 69 Query: 3502 IKKIVAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIV 3323 IKKIV AN+ I S DP +YL++ DVRIGEPS+T + + + PHMCRLSD TYAAPI+V Sbjct: 70 IKKIVKANDRIESSTDPSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILV 129 Query: 3322 SIEYTNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVV 3143 IEY SH +K K ++VIGRMPIMLRS CVL+ KDE ELARLGECPLDPGGYF++ Sbjct: 130 DIEYIEESHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFII 189 Query: 3142 KGTEKVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFT 2963 KGTEKV+LIQEQLSKNRIII++DKKG + ASVTSSTEATKSKTVI M+ EKIYLQLN FT Sbjct: 190 KGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFT 249 Query: 2962 A-MIPIMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKK 2786 IPIMV++KAMGMES QEVVQMVGRDPRYGALLLPSI+ECA IYTQEQALE+LE K Sbjct: 250 TPKIPIMVVLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETK 309 Query: 2785 VKRFTFSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAM 2606 VK+F F++A EKE RA+ ILRDVF+ANVPV + NF PKCIYVAVM+RRMM+AIL+KDAM Sbjct: 310 VKKFQFASAPPEKEGRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAM 369 Query: 2605 DDKDYVGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDI 2426 DDKDYVGNKRLELSGQLISLLFEDLFKTM SE+KK D L K SRSSR D + +L +I Sbjct: 370 DDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNI 429 Query: 2425 ITHGLERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRA 2246 I+ GLER +STGNWD+KRF+MHRKGM+QVLARLSFI+T+GH+T++SPQFEKSRKVSGPRA Sbjct: 430 ISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRA 489 Query: 2245 LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEE 2066 LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD++E PLISLCY LGVEDLELLS EE Sbjct: 490 LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEE 549 Query: 2065 LHTSNSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGG 1886 LHT NSFLVIFNG ILGKHRRP++FA MR LRRAGKIGEFVSVFVNEKQ CVYIASDGG Sbjct: 550 LHTPNSFLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGG 609 Query: 1885 RVCRPLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEA 1706 RVCRPLVIADKG+SRIKE+HMKEL DGVRTF+DFLR+GL+EYLDVNE+NNALIALYEGEA Sbjct: 610 RVCRPLVIADKGVSRIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEA 669 Query: 1705 EPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIY 1526 PETTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y Sbjct: 670 TPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLY 729 Query: 1525 MLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 1346 +LVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI Sbjct: 730 LLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 789 Query: 1345 VMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSP 1166 V KK S++NQKY NNT+DRI+RP R MQILDDDGLA+PGEIIRP+DIY+NKQSP Sbjct: 790 VFKKYSSVNQKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNKQSP 849 Query: 1165 INTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRP 986 I + + +PD+AY+ Q +KG +GE VVDRVAL +DK++ LC KF+IR TRRP Sbjct: 850 IIMKG--SPLPGIPDNAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRP 907 Query: 985 EIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKA 806 E+GDKFSSRHGQKGVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKA Sbjct: 908 ELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKA 967 Query: 805 GVSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGP 626 GVS GRFHYGSAFGEPSGHAD+V+AISETL+K+GFSY+GKDFLYSG G PLQAYIFMGP Sbjct: 968 GVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGP 1027 Query: 625 IYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFE 446 IYYQKLKHMVLDKMHAR GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I+E Sbjct: 1028 IYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYE 1087 Query: 445 RLMISSDPFEVQEDISTISSKLAFVPH-AKMGITS 344 RLMISSDPFEVQ + + L + H K GI S Sbjct: 1088 RLMISSDPFEVQ--VCRVCGLLGYYNHKLKTGICS 1120 Score = 100 bits (249), Expect = 5e-18 Identities = 45/51 (88%), Positives = 49/51 (96%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY+NHKLKTGICS+CKNGDNISTM+LPYACKLL QELQSMN+VPRLKL EA Sbjct: 1108 GYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1158 >ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis] gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis] Length = 1139 Score = 1731 bits (4482), Expect = 0.0 Identities = 857/1078 (79%), Positives = 957/1078 (88%) Frame = -3 Query: 3643 EESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITS 3464 E+ IDKQ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVN GIKKIV AN+ I S Sbjct: 19 EQLIDKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVRANDRIVS 78 Query: 3463 DVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKN 3284 VDPG+YL++KDVRIG PS D + L+PHMCRLSD TYAAPI+V++EY GSHD+K Sbjct: 79 TVDPGIYLRFKDVRIGTPSDIMDGVSEQLSPHMCRLSDKTYAAPILVNVEYIYGSHDQKT 138 Query: 3283 VMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQL 3104 + KN++VIGRMPIMLRS CVL KDE ELARLGECPLDPGGYFV+KGTEKVILIQEQL Sbjct: 139 RVEKNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQL 198 Query: 3103 SKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMG 2924 SKNRIII++DKKG + ASVTSSTEATKSKT+I M+KEK+YL LN F IPIMV++KAMG Sbjct: 199 SKNRIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFVKKIPIMVVIKAMG 258 Query: 2923 MESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKE 2744 MESDQEVVQMVGRDPRY ALLLPSI+ECA +IYTQ++ALE+L+ K E Sbjct: 259 MESDQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKALEYLDGK-------------E 305 Query: 2743 PRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELS 2564 RA+ ILRDVF+ANVPV + NFRPKC+YVAVMLRRMMEA+LNKDAMDDKDYVGNKRLELS Sbjct: 306 NRALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKRLELS 365 Query: 2563 GQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNW 2384 GQLISLLFEDLFKTM +E+++ D L K +RSSR D+A Y++RD IT+GLER +STGN+ Sbjct: 366 GQLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDNITNGLERTLSTGNF 425 Query: 2383 DLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2204 D+KRFKMHRKGMTQVL RLS+IA+LG MT++SPQFEKSRKVSGPRALQPSQWGMLCPCDT Sbjct: 426 DVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 485 Query: 2203 PEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGL 2024 PEGEACGLVKNLALMTHVTTD++E PLISLCY LGVEDLELLSGEELHT NSFLVIFNGL Sbjct: 486 PEGEACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLSGEELHTPNSFLVIFNGL 545 Query: 2023 ILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGIS 1844 ILGKHRRP++F +MRKLRRAGKIGEFVSVFVNEKQ VY+ASDGGRVCRPLVIAD+G+S Sbjct: 546 ILGKHRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQRAVYLASDGGRVCRPLVIADRGVS 605 Query: 1843 RIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTI 1664 RIKEHHMKELRDGVRTF+DFLR+GL+EYLDVNE+NNAL+ALYEGEA PETTHIEIEPFTI Sbjct: 606 RIKEHHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALVALYEGEATPETTHIEIEPFTI 665 Query: 1663 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRT 1484 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL+RMD+L+Y+LVYPQRPLLTTRT Sbjct: 666 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDSLLYLLVYPQRPLLTTRT 725 Query: 1483 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYAN 1304 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK AI QKY N Sbjct: 726 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYPAIRQKYEN 785 Query: 1303 NTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSLP 1124 SDRI+RP R ER ++LD DGLA+PGEII+P DIY+ K+ PI+T + SS +L Sbjct: 786 GASDRILRPDRT---VERERVLDYDGLAAPGEIIKPSDIYVKKECPIDTMGPVKSSAALE 842 Query: 1123 DSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKG 944 + Y+ + +YKGP+GE+ V+DRVAL SD++NNLC K +IRHTRRPE+GDKFSSRHGQKG Sbjct: 843 NIKYRPSPLSYKGPEGESPVIDRVALSSDRNNNLCIKVMIRHTRRPEVGDKFSSRHGQKG 902 Query: 943 VCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFG 764 VCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAFG Sbjct: 903 VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFG 962 Query: 763 EPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKM 584 EPSGHAD VEAISETLV +GFSY+GKD +YSG G PLQAYIFMGPIYYQKLKHMVLDKM Sbjct: 963 EPSGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKM 1022 Query: 583 HARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQ 410 HAR GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMISSDPFEVQ Sbjct: 1023 HARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQ 1080 Score = 97.1 bits (240), Expect = 6e-17 Identities = 44/51 (86%), Positives = 47/51 (92%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GYFN KL+ GICSTCKNGDNISTM+LPYACKLL QELQSMN+VPRLKL EA Sbjct: 1089 GYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1139 >ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform X1 [Glycine max] Length = 1165 Score = 1697 bits (4396), Expect = 0.0 Identities = 851/1105 (77%), Positives = 957/1105 (86%), Gaps = 4/1105 (0%) Frame = -3 Query: 3646 GEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLIT 3467 G+ D++ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFV T IKKIV AN+LI Sbjct: 27 GDSGFDQRVLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTDIKKIVRANDLIV 86 Query: 3466 SDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKK 3287 + P +YL++ +V IG+PSI D T LTP CRLSD TYAAPI +EYT GSHDK Sbjct: 87 ASRYPHIYLRFLNVGIGKPSIMIDEVTEDLTPQTCRLSDLTYAAPICADVEYTLGSHDKP 146 Query: 3286 NVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQ 3107 ++ K + IGRMPIMLRSC CVL+ +DE ELA+LGECPLDPGGYFV+KGTEKVILIQEQ Sbjct: 147 DIKRKLKVEIGRMPIMLRSCCCVLHGRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQ 206 Query: 3106 LSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAM 2927 LSKNRIII++DKKG + ASVTSSTE K+KTV+VM+KEK++LQLN F +P+MV+MKAM Sbjct: 207 LSKNRIIIDTDKKGNITASVTSSTEKIKTKTVVVMEKEKLWLQLNKFPKKVPLMVVMKAM 266 Query: 2926 GMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEK 2747 GMESDQEV QMVGRDPRY LLLPSI+EC +YT+EQALE+L+K VKR T+SN + EK Sbjct: 267 GMESDQEVTQMVGRDPRYSFLLLPSIEECTKCKVYTREQALEYLDKLVKRPTYSNNAAEK 326 Query: 2746 EPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLEL 2567 E A LRDVF+ANVPV Q NFRPKCIYVAVM+RR+M+AILNKDAMDDKDYVGNKRLEL Sbjct: 327 EGAAFSALRDVFLANVPVDQDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLEL 386 Query: 2566 SGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMR--DIITHGLERAIST 2393 SGQLISLLFEDLFK+M +E+K TD L KP ++ DI L R IIT GLER +ST Sbjct: 387 SGQLISLLFEDLFKSMTTEVKNLTDKMLEKPDKAKNFDICTLLTRTRSIITLGLERTLST 446 Query: 2392 GNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP 2213 GN+++KRF+M RKGMTQVL RLSFI LGHMT++SPQFEKSRKVSGPRALQPSQWGMLCP Sbjct: 447 GNFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCP 506 Query: 2212 CDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIF 2033 CDTPEGE+CGLVKNLALMTHVTTDE+E PLISLC SLGVED++ LS EELHT +SFLVIF Sbjct: 507 CDTPEGESCGLVKNLALMTHVTTDEEEKPLISLCESLGVEDMKDLSAEELHTPDSFLVIF 566 Query: 2032 NGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADK 1853 NGLILGKHRRP HFA A+RKLRRAGKIGEFVSV+VNEKQ CVY+ASDGGRVCRPLVIADK Sbjct: 567 NGLILGKHRRPLHFATAIRKLRRAGKIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADK 626 Query: 1852 GISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEP 1673 GISRIK+HHMKEL DGVRTF+DFLR+GLLEYLDVNE+NNALIALYEG+A ETTHIEIEP Sbjct: 627 GISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNALIALYEGDATSETTHIEIEP 686 Query: 1672 FTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLT 1493 FTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLT Sbjct: 687 FTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLT 746 Query: 1492 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQK 1313 T+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK +AI QK Sbjct: 747 TKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYNAIIQK 806 Query: 1312 YANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTIT-SS 1136 ++N+TSDRI+RP R A RMQILDDDG+A+PGEI+RP+DIYINKQSPI+TR T S+ Sbjct: 807 HSNDTSDRILRPNRTADTAGRMQILDDDGIAAPGEILRPYDIYINKQSPIDTRTPKTGSA 866 Query: 1135 MSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRH 956 +LPDSAY++ Q++KG GE VVDRV L SDKDNN+C KF+IRHTRRPE+GDKFSSRH Sbjct: 867 ANLPDSAYRSNAQSFKGNGGE--VVDRVVLCSDKDNNMCIKFLIRHTRRPELGDKFSSRH 924 Query: 955 GQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYG 776 GQKGVCG IV QED PFSE+GI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYG Sbjct: 925 GQKGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 984 Query: 775 SAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMV 596 SAFGE SGHAD+VE ISETLV KGF+YSGKDF+YSG G PLQAYIFMGPIYYQKLKHMV Sbjct: 985 SAFGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 1044 Query: 595 LDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFE 416 LDKMHAR GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I+ERLM+SSDPFE Sbjct: 1045 LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFE 1104 Query: 415 VQEDISTISSKLAFVPH-AKMGITS 344 VQ + T L + H K GI S Sbjct: 1105 VQ--VCTACGLLGYYNHKLKTGICS 1127 Score = 98.6 bits (244), Expect = 2e-17 Identities = 43/51 (84%), Positives = 49/51 (96%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY+NHKLKTGICS+CKNGDNISTM+LPYACKL+ QELQSMN+VPRLKL +A Sbjct: 1115 GYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLADA 1165 >ref|XP_006279912.1| hypothetical protein CARUB_v10025768mg [Capsella rubella] gi|482548616|gb|EOA12810.1| hypothetical protein CARUB_v10025768mg [Capsella rubella] Length = 1160 Score = 1686 bits (4365), Expect = 0.0 Identities = 831/1101 (75%), Positives = 958/1101 (87%), Gaps = 14/1101 (1%) Frame = -3 Query: 3670 NNQSMGSSGEES-IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKK 3494 + + + S+ +++ I+K+ LSAP+KS DKFQL+PEFLKVRGLVKQHLDSFNY +N GIKK Sbjct: 4 DQEDLDSTNDDNFINKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYLINVGIKK 63 Query: 3493 IVAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIE 3314 IV AN LITS DP +YL++K VR+GEPSI + PHMCRL+D TYAAPI V+IE Sbjct: 64 IVKANCLITSTADPSIYLRFKAVRVGEPSILNINMAEQINPHMCRLADMTYAAPIHVNIE 123 Query: 3313 YTNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGT 3134 Y +GSH +K KNN++IGRMPIMLRSCRCVLN KDEDELARLGECPLDPGGYFV+KGT Sbjct: 124 YVHGSHGEKQTSAKNNVLIGRMPIMLRSCRCVLNGKDEDELARLGECPLDPGGYFVIKGT 183 Query: 3133 EKVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMI 2954 EKV+LIQEQLSKNRIII+SDKKG + ASVTSSTE TKSKTVI M+KE+IYL L+ F I Sbjct: 184 EKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKERIYLFLHQFVKKI 243 Query: 2953 PIMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRF 2774 PI++++KAMGMESDQE+VQMVGRDPR+ A LLPSI+EC + + TQ+QAL++LE KVK+ Sbjct: 244 PIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKT 303 Query: 2773 TFSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKD 2594 ++ L+K+ RA+ ILRD+F+A+VPVR NFR KC YV VMLRRM+EA+LNKDAMDDKD Sbjct: 304 SYG-PPLQKDGRALYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKD 362 Query: 2593 YVGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHG 2414 YVGNKRLELSGQLISLLFEDLFKTM +E K D+ L K +R+SR D + L DII+ G Sbjct: 363 YVGNKRLELSGQLISLLFEDLFKTMITEAIKKVDVILTKQNRASRFDFSQCLSGDIISLG 422 Query: 2413 LERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPS 2234 LER +STGN+D+KRF+MHRKGMTQVL RLSFI +LG +TKISPQFEKSRKVSGPR+LQPS Sbjct: 423 LERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPS 482 Query: 2233 QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTS 2054 QWGMLCPCDTPEGE+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT Sbjct: 483 QWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTP 542 Query: 2053 NSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCR 1874 +SFLVI NGLILGKHRRP++FA ++R+LRRAGKIGEFVSVF NEKQ CVY+ASDGGRVCR Sbjct: 543 DSFLVILNGLILGKHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDGGRVCR 602 Query: 1873 PLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPE- 1697 PLVIADKGISR+K+HHMKEL+DGVRTF+DF+R+GL+EYLDVNE+NNALIALYE +A E Sbjct: 603 PLVIADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDATTEL 662 Query: 1696 ------------TTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQ 1553 TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQ Sbjct: 663 DEGGEAAKIRADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ 722 Query: 1552 LYRMDTLIYMLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 1373 L RMDTL+Y+LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS Sbjct: 723 LNRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 782 Query: 1372 LDRGFGRCIVMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPH 1193 LDRGFGRCIVMKK+ A +QKY NNT DRI+RPQR G +AE+MQILD+DG+ASPGEIIRP+ Sbjct: 783 LDRGFGRCIVMKKIVATSQKYDNNTQDRILRPQRTGPDAEKMQILDNDGIASPGEIIRPN 842 Query: 1192 DIYINKQSPINTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFK 1013 D+YINKQSP++T++ +T+ +S DS Y+ A + +KGP+GET VVDRVAL S+K ++LC K Sbjct: 843 DVYINKQSPVDTKNKMTTQLS--DSQYRPAREYFKGPEGETQVVDRVALCSNKHDHLCIK 900 Query: 1012 FIIRHTRRPEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGK 833 +IIRHTRRPE+GDKFSSRHGQKGVCG I+QQED PFSE GI PDLIMNPHGFPSRMT+GK Sbjct: 901 YIIRHTRRPELGDKFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGK 960 Query: 832 MIELLGGKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSP 653 MIELLG KAGVS GRFHYGSAFGE GHAD+VE IS TLV KGFSYSGKD LYSG G P Sbjct: 961 MIELLGSKAGVSCGRFHYGSAFGERGGHADKVETISATLVNKGFSYSGKDLLYSGISGEP 1020 Query: 652 LQAYIFMGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIA 473 LQAYIFMGPIYYQKLKHMVLDKMHAR GPRVM+TRQPTEG+S++GGLR+GEMERDCLIA Sbjct: 1021 LQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIA 1080 Query: 472 YGASMMIFERLMISSDPFEVQ 410 YGASM+I+ERLM+SSDPFEVQ Sbjct: 1081 YGASMLIYERLMVSSDPFEVQ 1101 Score = 92.8 bits (229), Expect = 1e-15 Identities = 42/51 (82%), Positives = 47/51 (92%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY+++KLK CSTCKNGDNI+TM+LPYACKLLFQELQSMNVVPRLKL EA Sbjct: 1110 GYYSYKLKKAFCSTCKNGDNIATMKLPYACKLLFQELQSMNVVPRLKLIEA 1160 >ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutrema salsugineum] gi|557099252|gb|ESQ39616.1| hypothetical protein EUTSA_v10000748mg [Eutrema salsugineum] Length = 1164 Score = 1677 bits (4344), Expect = 0.0 Identities = 830/1091 (76%), Positives = 949/1091 (86%), Gaps = 16/1091 (1%) Frame = -3 Query: 3634 IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDVD 3455 +D+Q LSAP+KS DKFQL+PEFLKVRGLVKQHLDSFNYFVN GIKKIV AN+LITS +D Sbjct: 17 VDRQKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFVNVGIKKIVRANSLITSSLD 76 Query: 3454 PGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVMT 3275 P +YL++K+VR+GEPSI + PHMCRL+D TYAAPI V+IEY +GSH K Sbjct: 77 PEIYLRFKEVRVGEPSILNVNMAEEINPHMCRLADMTYAAPIYVNIEYAHGSHGKTQHSA 136 Query: 3274 KNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 3095 K+N++IGRMPIMLRSCRCVL+ KDE+ELARLGECPLDPGGYFV+KGTEKV+LIQEQLSKN Sbjct: 137 KDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQEQLSKN 196 Query: 3094 RIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGMES 2915 RIII+SDKKG + ASVTSSTE TKSKTVI M+K KIYL L+ F IPI++++KAMGMES Sbjct: 197 RIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKGKIYLFLHQFVKKIPIIIVLKAMGMES 256 Query: 2914 DQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPRA 2735 DQE+VQMVGRDPR+ A LLPSI+EC + + T++QAL++LE KVK+ ++ EK+ RA Sbjct: 257 DQEIVQMVGRDPRFSASLLPSIEECVSEGVNTRKQALDYLEAKVKKTSYGPPP-EKDGRA 315 Query: 2734 MKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQL 2555 + ILRDVF+A+VPVR NFR KC YV VMLRRM+EA+LNKDAMDDKDYVGNKRLELSGQL Sbjct: 316 LYILRDVFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQL 375 Query: 2554 ISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDI---ITHGLERAISTGNW 2384 ISLLFEDLFKTM +E K D L KP+R+SR D + L + I+ GLER +STGN+ Sbjct: 376 ISLLFEDLFKTMITEAVKKVDGILQKPNRASRFDFSQCLTGEKNHNISFGLERTLSTGNF 435 Query: 2383 DLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2204 D+KRF+MHRKGMTQVL RLSFI +LG +TKISPQFEKSRKVSGPR+LQPSQWGMLCPCDT Sbjct: 436 DIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDT 495 Query: 2203 PEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGL 2024 PEGE+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT +SFLVIFNGL Sbjct: 496 PEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVIFNGL 555 Query: 2023 ILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGIS 1844 ILGKHRRP++FA ++R+LRRAGKIGEFVSVF+NEKQ CVY+ASDGGRVCRPLVIADKG+S Sbjct: 556 ILGKHRRPQYFANSLRRLRRAGKIGEFVSVFINEKQHCVYVASDGGRVCRPLVIADKGVS 615 Query: 1843 RIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPE----------- 1697 R+K+HHMKEL+DGVRTF+DF+R+GL+EYLDVNE+NNALIALYE +A E Sbjct: 616 RVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDATSEMAETAEAAKIR 675 Query: 1696 --TTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYM 1523 TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y+ Sbjct: 676 EGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLYL 735 Query: 1522 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1343 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS +GYDIEDAIVMNK+SLDRGFGRCIV Sbjct: 736 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNTGYDIEDAIVMNKASLDRGFGRCIV 795 Query: 1342 MKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPI 1163 MKK+ A QKY N+ DRI+RPQR G +AE+MQILDDDG+A+PGEIIRP+D+YINKQ P+ Sbjct: 796 MKKIVATCQKYGNDAVDRILRPQRTGPDAEKMQILDDDGIAAPGEIIRPNDVYINKQIPV 855 Query: 1162 NTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPE 983 +TRD ITS +S DS Y+ A + +KGP+GET VVDRVAL SDK+ NLC K+IIRHTRRPE Sbjct: 856 DTRDNITSPLS--DSQYRPAREYFKGPEGETQVVDRVALCSDKNGNLCIKYIIRHTRRPE 913 Query: 982 IGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAG 803 +GDKFSSRHGQKGVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLG KAG Sbjct: 914 LGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 973 Query: 802 VSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPI 623 V SGRFHYGSAFGE SGHAD+VE IS TLVK GFSYSGKD LYSG G PLQ Y+FMGPI Sbjct: 974 VCSGRFHYGSAFGERSGHADKVETISATLVKHGFSYSGKDLLYSGLSGEPLQTYVFMGPI 1033 Query: 622 YYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFER 443 YYQKLKHMVLDKMHAR GPRVM+TRQPTEG+S++GGLR+GEMERDCLIAYGASM+I+ER Sbjct: 1034 YYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYER 1093 Query: 442 LMISSDPFEVQ 410 LMISSDPFEVQ Sbjct: 1094 LMISSDPFEVQ 1104 Score = 95.1 bits (235), Expect = 2e-16 Identities = 43/51 (84%), Positives = 47/51 (92%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY+N+KLK CSTCKNGDNI+TM+LPYACKLLFQELQSMNVVPRLKL EA Sbjct: 1113 GYYNYKLKKAFCSTCKNGDNIATMKLPYACKLLFQELQSMNVVPRLKLVEA 1163 >ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phaseolus vulgaris] gi|561026273|gb|ESW24958.1| hypothetical protein PHAVU_004G175000g [Phaseolus vulgaris] Length = 1161 Score = 1674 bits (4335), Expect = 0.0 Identities = 838/1104 (75%), Positives = 952/1104 (86%), Gaps = 4/1104 (0%) Frame = -3 Query: 3643 EESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITS 3464 + D++ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFV T IKKIV ANNLI++ Sbjct: 24 DSGFDQRILTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVRANNLISA 83 Query: 3463 DVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKN 3284 P +YL++ +V+I +P I + T +TP CRLSD TYAAPI V +EYT+GS D Sbjct: 84 TRHPHIYLRFLNVKIRKPCIMDESVTDDVTPQTCRLSDQTYAAPICVDVEYTHGSRDDPR 143 Query: 3283 VMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQL 3104 + + N+ IGRMPIMLRSC CVL +D+ ELA+LGECPLDPGGYFVVKGTEKVILIQEQL Sbjct: 144 LHKRLNVEIGRMPIMLRSCCCVLYGRDQAELAKLGECPLDPGGYFVVKGTEKVILIQEQL 203 Query: 3103 SKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMG 2924 SKNRIII++DKKG + ASVTSSTE K+KT+IVM+ EK++L LN F +P+M +MKAMG Sbjct: 204 SKNRIIIDTDKKGNIAASVTSSTEKIKTKTIIVMENEKLWLHLNQFPKKVPLMAVMKAMG 263 Query: 2923 MESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKE 2744 +ESDQEV QMVGRDPRY LLLPS +EC N+YTQEQALE+L+K VKR +S+ S EKE Sbjct: 264 IESDQEVTQMVGRDPRYSFLLLPSFEECRKCNVYTQEQALEYLDKMVKRSMYSSNSAEKE 323 Query: 2743 PRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELS 2564 RA +LRDVF+ANVPV NFRPKCIYVAVM+RR+M+AILNKDAMDDKDYVGNKRLELS Sbjct: 324 GRAFSVLRDVFLANVPVDGDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELS 383 Query: 2563 GQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMR--DIITHGLERAISTG 2390 GQLISLLFEDLFK+M +E+K TD L KP ++ DI+ L R +IIT GLER +STG Sbjct: 384 GQLISLLFEDLFKSMATEVKNLTDKMLDKPDKARNFDISTLLNRTQNIITLGLERTLSTG 443 Query: 2389 NWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPC 2210 N+++KRF+M RKGMTQVL RLSFI +GHMT++SPQFEKSRKVSGPRALQPSQWGMLCPC Sbjct: 444 NFEIKRFRMERKGMTQVLQRLSFIGAMGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPC 503 Query: 2209 DTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFN 2030 DTPEGE+CGLVKNLALMTHVTTDE+E+PLIS+CYSLGVEDLELLS EELHT +SFLVI N Sbjct: 504 DTPEGESCGLVKNLALMTHVTTDEEESPLISMCYSLGVEDLELLSAEELHTPDSFLVILN 563 Query: 2029 GLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKG 1850 GLILGKH+RP FA A+RKLRR GKIGEFVSVFV+EKQ CVY+ASDGGRVCRPLVIADKG Sbjct: 564 GLILGKHKRPLRFATAIRKLRRRGKIGEFVSVFVHEKQNCVYLASDGGRVCRPLVIADKG 623 Query: 1849 ISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPF 1670 ISRIK+HHMKEL DGVRTF+DFLR+GLLEYLDVNE+NN LIALYEG+A ETTHIEIEPF Sbjct: 624 ISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNTLIALYEGDATSETTHIEIEPF 683 Query: 1669 TILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTT 1490 TILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLTT Sbjct: 684 TILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLTT 743 Query: 1489 RTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKY 1310 +TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK SA+ QK+ Sbjct: 744 KTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVIQKH 803 Query: 1309 ANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSM- 1133 +N+TSDRI+RP R A RM+ILDDDG+A+PGEI++P DIYINKQSPI+TR T + Sbjct: 804 SNDTSDRILRPNRAADTAGRMRILDDDGIAAPGEILKPFDIYINKQSPIDTRTPRTGAAG 863 Query: 1132 SLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHG 953 +LPDSAY++ Q++KG GE VVDRV L SDKD N+C KF+IRHTRRPE+GDKFSSRHG Sbjct: 864 NLPDSAYRSNSQSFKGHGGE--VVDRVVLCSDKDKNMCIKFLIRHTRRPELGDKFSSRHG 921 Query: 952 QKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGS 773 QKGVCG IVQQED PFSE+GI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGS Sbjct: 922 QKGVCGTIVQQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 981 Query: 772 AFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVL 593 AFGE SGHAD+VEAISETLV KGFSYSGKDF+YSG G PLQAYIFMGPIYYQKLKHMVL Sbjct: 982 AFGERSGHADKVEAISETLVSKGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVL 1041 Query: 592 DKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEV 413 DKMHAR GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I+ERLM+SSDPFEV Sbjct: 1042 DKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEV 1101 Query: 412 QEDISTISSKLAFVPH-AKMGITS 344 Q + T L + H K GI S Sbjct: 1102 Q--VCTACGLLGYYNHKLKTGICS 1123 Score = 95.1 bits (235), Expect = 2e-16 Identities = 42/51 (82%), Positives = 47/51 (92%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY+NHKLKTGICS CKNGD ISTM+LPYACKL+ QELQSMN+VPRLKL +A Sbjct: 1111 GYYNHKLKTGICSYCKNGDKISTMKLPYACKLMIQELQSMNIVPRLKLADA 1161 >ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Fragaria vesca subsp. vesca] Length = 1163 Score = 1672 bits (4331), Expect = 0.0 Identities = 833/1098 (75%), Positives = 938/1098 (85%), Gaps = 1/1098 (0%) Frame = -3 Query: 3634 IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDVD 3455 IDK+ L+AP+KS DKF L+PEFLKVRGLVKQHLDSFNYFVNTGIKKIV AN+ I S VD Sbjct: 33 IDKELLAAPIKSAKDKFALIPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSGVD 92 Query: 3454 PGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVMT 3275 P ++L++ +V I PS+T D T + PH CRLSD TY+API V +EY GSHD+K + T Sbjct: 93 PSIWLRFNNVYIDRPSLTTDGVTTEIAPHTCRLSDMTYSAPIRVDVEYVEGSHDQKMIAT 152 Query: 3274 KNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 3095 + I IGR+PIMLRSC C L K E ELA LGECPLDPGGYF++KG EKV+LIQEQLSKN Sbjct: 153 RKGIEIGRLPIMLRSCCCTLYGKTESELATLGECPLDPGGYFIIKGNEKVLLIQEQLSKN 212 Query: 3094 RIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGMES 2915 RIII+ DKKG + ASVTSS+E KSKT+I M+K+KIYL+LN F+ IPIMV+MKAMGM S Sbjct: 213 RIIIDMDKKGNVNASVTSSSETIKSKTIIQMEKQKIYLELNQFSKKIPIMVVMKAMGMTS 272 Query: 2914 DQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPRA 2735 DQEVVQMVGRDPRYGALL+PSI+ECA IYT+EQAL +LE KVKR F +AS +K+ + Sbjct: 273 DQEVVQMVGRDPRYGALLMPSIEECAKEGIYTKEQALLYLEPKVKRSMFDSASSDKDSKV 332 Query: 2734 MKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQL 2555 M +LRD+F+ANVPVR+ NFRPKCIYVAVMLRR+M+AILNKD MDDKDYVGNKRLELSGQ Sbjct: 333 MAVLRDIFIANVPVRRSNFRPKCIYVAVMLRRIMDAILNKDTMDDKDYVGNKRLELSGQS 392 Query: 2554 ISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNWDLK 2375 ISLLFEDLFKTM SE++K D L KPSRSSR D+A Y+ +D I+ GLER +STGN+DLK Sbjct: 393 ISLLFEDLFKTMISEVRKTVDNILTKPSRSSRFDLAQYIRKDQISLGLERTLSTGNFDLK 452 Query: 2374 RFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 2195 RFKMHR GMTQVLARLSFI +LG MT+ PQFEKSRKVSGPRALQPSQWGMLCPCDTPEG Sbjct: 453 RFKMHRTGMTQVLARLSFIGSLGQMTRTKPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 512 Query: 2194 EACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGLILG 2015 EACGLVKNLALM HVTTDE+E PLISLC LGVEDLE LS EELH+ NSFLV+FNG ILG Sbjct: 513 EACGLVKNLALMAHVTTDEEEGPLISLCKCLGVEDLETLSAEELHSPNSFLVLFNGDILG 572 Query: 2014 KHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGISRIK 1835 KHR+P+ A AMRKLRRAGKIGEFVSVFVNEKQ CVYIASDGGRVCRPLVIADKGISR+K Sbjct: 573 KHRKPQRLATAMRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGISRVK 632 Query: 1834 EHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTILGV 1655 E+HM+EL GVRTF+DFL +GL+EYLDVNEQNNALIALYE EA ETTHIEIEPFTILGV Sbjct: 633 EYHMQELNAGVRTFDDFLSDGLIEYLDVNEQNNALIALYEDEATTETTHIEIEPFTILGV 692 Query: 1654 CAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRTIEL 1475 AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL R+D L+Y+LVYPQRPLLTT+TIEL Sbjct: 693 IAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRID-LLYLLVYPQRPLLTTKTIEL 751 Query: 1474 VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYANNTS 1295 VG+DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI+MKK NQ Y+NNT Sbjct: 752 VGFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCILMKKFVVANQNYSNNTQ 811 Query: 1294 DRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSLPDSA 1115 DRII+P + ++ +M++LDDDG+A+PGEII +DIY+ KQ PI TR I S L DS Sbjct: 812 DRIIKPNKDEVDSGKMRVLDDDGIAAPGEIITANDIYVKKQVPIVTRGAIRS--GLKDSD 869 Query: 1114 YKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKGVCG 935 Y++ Q YKGP GE+ VVD+VALFSDK NNLC K +IRHTRRPE+GDKFSSRHGQKGVCG Sbjct: 870 YRSTFQRYKGPDGESCVVDKVALFSDKHNNLCVKLLIRHTRRPEVGDKFSSRHGQKGVCG 929 Query: 934 IIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFGEPS 755 IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAFGEPS Sbjct: 930 TIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 989 Query: 754 GHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKMHAR 575 GHAD+VEAISETLV+ GFSY GKD++ SG G PLQAYIFMGPIYYQKLKHMVLDKMHAR Sbjct: 990 GHADKVEAISETLVRMGFSYDGKDYICSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1049 Query: 574 ARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQEDIST 395 GPRV LTRQPTEG++R+GGLR+GEMERDCLIAYGASM+++ERLMISSDPFEVQ + Sbjct: 1050 GSGPRVSLTRQPTEGKARNGGLRVGEMERDCLIAYGASMLLYERLMISSDPFEVQ--VCR 1107 Query: 394 ISSKLAFVPH-AKMGITS 344 + L + H K GI S Sbjct: 1108 VCGLLGYYNHKMKAGICS 1125 Score = 97.8 bits (242), Expect = 3e-17 Identities = 43/51 (84%), Positives = 48/51 (94%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY+NHK+K GICS+CKNGDNISTM+LPYACKLL QELQSMN+VPRLKL EA Sbjct: 1113 GYYNHKMKAGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1163 >ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arabidopsis lyrata subsp. lyrata] gi|297309357|gb|EFH39781.1| hypothetical protein ARALYDRAFT_917015 [Arabidopsis lyrata subsp. lyrata] Length = 1165 Score = 1669 bits (4322), Expect = 0.0 Identities = 832/1099 (75%), Positives = 948/1099 (86%), Gaps = 18/1099 (1%) Frame = -3 Query: 3652 SSGEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNL 3473 ++ + IDK+ LSAP+KS DKFQL+PEFLKVRGLVKQHLDSFNYF+N GIKKIV AN Sbjct: 11 TNDDNFIDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIKKIVHANCR 70 Query: 3472 ITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHD 3293 I S DP +YL++K+VR+GEPSI + + PHMCRL+D TYAAPI V+IEY +GSH Sbjct: 71 IASVTDPSIYLRFKNVRVGEPSIMNINISEEINPHMCRLADMTYAAPIYVNIEYVHGSHG 130 Query: 3292 KKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQ 3113 KK KN+ +IGRMPIMLRSCRCVL+ KDE+ELARLGECPLDPGGYFV+KGTEKV+LIQ Sbjct: 131 KKATSVKNDFIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQ 190 Query: 3112 EQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMK 2933 EQLSKNRIII+SDKKG + ASVTSSTE TKSKTVI M+KEKIYL L+ F IPI++++K Sbjct: 191 EQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHQFVKKIPIVIVLK 250 Query: 2932 AMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASL 2753 AMGMESDQE+VQMVGRDPR+ A LLPSI+EC + + TQ+QAL++LE KVK+ ++ Sbjct: 251 AMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKTSYGPPP- 309 Query: 2752 EKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRL 2573 EK+ RA+ ILRD+F+A+VPVR NFR KC YV VMLRRM+EA+LNKD+MDDKDYVGNKRL Sbjct: 310 EKDGRALYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDSMDDKDYVGNKRL 369 Query: 2572 ELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLM----RDIITHGLER 2405 ELSGQL+SLLFEDLFKTM SE K D L+KPSR+SR D + YL ++ I+ GLER Sbjct: 370 ELSGQLMSLLFEDLFKTMLSEAIKKVDAILSKPSRASRFDFSQYLTTGDSQNTISVGLER 429 Query: 2404 AISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWG 2225 +STGN+D+KRF+MHRKGMTQVL RLSFI +LG +TKISPQFEKSRKVSGPR+LQPSQWG Sbjct: 430 TLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWG 489 Query: 2224 MLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSF 2045 MLCPCDTPEGE+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT +SF Sbjct: 490 MLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSF 549 Query: 2044 LVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLV 1865 LVI NGLILGKHRRP++FA ++R+LRRAGKIGEFVSVF NEKQ CVY+ASDGGRVCRPLV Sbjct: 550 LVILNGLILGKHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDGGRVCRPLV 609 Query: 1864 IADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPE---- 1697 IADKGISR+K+HHMKEL+DGVRTF+DF+R+GL+EYLDVNE+NNALIALYE EA E Sbjct: 610 IADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESEATTELDEG 669 Query: 1696 ---------TTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYR 1544 TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL R Sbjct: 670 AEAAKIKADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNR 729 Query: 1543 MDTLIYMLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 1364 MDTL+Y+LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS SGYDIEDAIVMNKSSLDR Sbjct: 730 MDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNSGYDIEDAIVMNKSSLDR 789 Query: 1363 GFGRCIVMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIY 1184 GFGRCIVMKK+ A QKY N T DRI+ PQR G +AE+MQILDDDG+ASPGEIIRP+D+Y Sbjct: 790 GFGRCIVMKKIVATCQKYENGTVDRILMPQRTGPDAEKMQILDDDGIASPGEIIRPNDVY 849 Query: 1183 INKQSPI-NTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFI 1007 I KQ P+ TRD ITS +S DS Y+ A + +KGP+GET VVDRVAL SDK +LC K+I Sbjct: 850 IYKQIPVCTTRDKITSPLS--DSQYRPAREFFKGPEGETQVVDRVALCSDKSGSLCIKYI 907 Query: 1006 IRHTRRPEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMI 827 IRHTRRPE+GDKFSSRHGQKGVCG I+QQED PFSE GI PDLIMNPHGFPSRMT+GKMI Sbjct: 908 IRHTRRPELGDKFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMI 967 Query: 826 ELLGGKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQ 647 ELLG KAGVS GRFHYGSAFGE SGHAD+VE IS+TLV KGFSYSGKD LYSG G PL+ Sbjct: 968 ELLGSKAGVSCGRFHYGSAFGERSGHADKVETISKTLVDKGFSYSGKDLLYSGLSGEPLE 1027 Query: 646 AYIFMGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYG 467 AYIFMGPIYYQKLKHMVLDKMHAR GPRVM+TRQPTEG+S++GGLR+GEMERDCLIAYG Sbjct: 1028 AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYG 1087 Query: 466 ASMMIFERLMISSDPFEVQ 410 ASM+I+ERLMISSDPFEVQ Sbjct: 1088 ASMLIYERLMISSDPFEVQ 1106 Score = 96.3 bits (238), Expect = 1e-16 Identities = 43/51 (84%), Positives = 48/51 (94%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY+N+KLK +CSTCKNGDNI+TM+LPYACKLLFQELQSMNVVPRLKL EA Sbjct: 1115 GYYNYKLKKAVCSTCKNGDNIATMKLPYACKLLFQELQSMNVVPRLKLVEA 1165 >ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform X1 [Glycine max] Length = 1166 Score = 1669 bits (4321), Expect = 0.0 Identities = 845/1121 (75%), Positives = 952/1121 (84%), Gaps = 11/1121 (0%) Frame = -3 Query: 3673 TNNQSMGSS-------GEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYF 3515 T NQ G + G+ D++ L+AP+KS VDKFQL+PEFLKVRGLVKQHLDSFNYF Sbjct: 12 TTNQFNGGNKLPGDHCGDSGFDQRVLTAPIKSAVDKFQLIPEFLKVRGLVKQHLDSFNYF 71 Query: 3514 VNTGIKKIVAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAA 3335 V T IKKIV ANNLI + P +YL++ +V IG+PS+ D T LTP CRLSD TYAA Sbjct: 72 VRTDIKKIVRANNLIMASRYPHIYLRFLNVGIGKPSMMIDEVTEGLTPQTCRLSDLTYAA 131 Query: 3334 PIIVSIEYTNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGG 3155 PI +EYT SHDK + + IGRMPIMLRSC CVL+ KDE ELA+LGECPLDPGG Sbjct: 132 PICADVEYTLRSHDKPDNKRTLRVEIGRMPIMLRSCCCVLHGKDEAELAKLGECPLDPGG 191 Query: 3154 YFVVKGTEKVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQL 2975 YFV+KGTEKVILIQEQLSKNRIII++DKKG + ASVTSSTE K+KTVIVM+ EK++LQL Sbjct: 192 YFVIKGTEKVILIQEQLSKNRIIIDTDKKGNITASVTSSTEKIKTKTVIVMENEKLWLQL 251 Query: 2974 NTFTAMIPIMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFL 2795 N F +P+MV+MKAMGMESDQEV+QMVGRDPRY LLLPSI+EC +YT+EQALE+L Sbjct: 252 NKFPKKVPLMVVMKAMGMESDQEVIQMVGRDPRYSFLLLPSIEECRKCKVYTKEQALEYL 311 Query: 2794 EKKVKRFTFSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNK 2615 +K VKR T+S+ S EKE A LRDVF+ANVPV Q NF+ KCIYVAVM+RR+M+AILNK Sbjct: 312 DKLVKRPTYSSNSAEKEGAAFSALRDVFLANVPVDQDNFQKKCIYVAVMMRRIMDAILNK 371 Query: 2614 DAMDDKDYVGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLM 2435 DAMDDKDYVGNKRLELSGQLISLLFEDLFK+M +E+K TD L KP ++ DI L Sbjct: 372 DAMDDKDYVGNKRLELSGQLISLLFEDLFKSMTTEVKNLTDKMLDKPDKAKNFDICTLLT 431 Query: 2434 R--DIITHGLERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKV 2261 R IIT GLER +STGN+++KRF+M RKGMTQVL RLSFI LGHMT++SPQFEKSRKV Sbjct: 432 RTRSIITLGLERTLSTGNFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKV 491 Query: 2260 SGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLEL 2081 SGPRALQPSQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDE+E PLISL YSL V +E Sbjct: 492 SGPRALQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEKPLISLFYSLDVARIEH 551 Query: 2080 LSGEELHTSNSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYI 1901 L EELHT +SFLVIFNGLILGKHRRP HFA +RKLRRAG+IGEFVSV+VNEKQ CVY+ Sbjct: 552 LFAEELHTPDSFLVIFNGLILGKHRRPLHFATRIRKLRRAGEIGEFVSVYVNEKQHCVYL 611 Query: 1900 ASDGGRVCRPLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIAL 1721 ASDGGRVCRPLVIADKGISRIK+HHMKEL DGV TF+DFLR+GLLEYLDVNE+NNALIAL Sbjct: 612 ASDGGRVCRPLVIADKGISRIKQHHMKELMDGVCTFDDFLRDGLLEYLDVNEENNALIAL 671 Query: 1720 YEGEAEPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRM 1541 YEG+A ETTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RM Sbjct: 672 YEGDATSETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRM 731 Query: 1540 DTLIYMLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRG 1361 D+L+Y+LVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRG Sbjct: 732 DSLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRG 791 Query: 1360 FGRCIVMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYI 1181 FGRCIVMKK +AI QK++N+TSDRI+RP R A RMQILDDDG+A+PGEI+RP+DIYI Sbjct: 792 FGRCIVMKKYNAIIQKHSNDTSDRILRPNRTADTAGRMQILDDDGIAAPGEILRPYDIYI 851 Query: 1180 NKQSPINTRDTIT-SSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFII 1004 NKQSPI+TR T S+ +LPDSAY++ Q++KG GE VVDRV L SDKDNN+C KF+I Sbjct: 852 NKQSPIDTRTPKTGSAANLPDSAYRSNAQSFKGNGGE--VVDRVVLCSDKDNNMCIKFLI 909 Query: 1003 RHTRRPEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIE 824 RHTRRPE+GDKFSSRHGQKGVCG IV QED PFSE+GI PDLIMNPHGFPSRMT+GKMIE Sbjct: 910 RHTRRPELGDKFSSRHGQKGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIE 969 Query: 823 LLGGKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQA 644 LLGGKAGVS GRFHYGSAFGE SGHAD+VE ISETLV KGF+YSGKDF+YSG G PLQA Sbjct: 970 LLGGKAGVSCGRFHYGSAFGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQA 1029 Query: 643 YIFMGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGA 464 YIFMGPIYYQKLKHMVLDKMHAR GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGA Sbjct: 1030 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGA 1089 Query: 463 SMMIFERLMISSDPFEVQEDISTISSKLAFVPH-AKMGITS 344 SM+I+ERLM+SSDPFEVQ + T L + H K GI S Sbjct: 1090 SMLIYERLMLSSDPFEVQ--VCTACGLLGYYNHKLKTGICS 1128 Score = 98.6 bits (244), Expect = 2e-17 Identities = 43/51 (84%), Positives = 49/51 (96%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY+NHKLKTGICS+CKNGDNISTM+LPYACKL+ QELQSMN+VPRLKL +A Sbjct: 1116 GYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLADA 1166 >ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform X3 [Citrus sinensis] Length = 1058 Score = 1667 bits (4316), Expect = 0.0 Identities = 826/1022 (80%), Positives = 911/1022 (89%), Gaps = 1/1022 (0%) Frame = -3 Query: 3406 ITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVMTKNNIVIGRMPIMLRSC 3227 +T D + L PHMCRLSD TYAAPI+V+IEY GSH +K M KN++VIGR+PIMLRSC Sbjct: 1 MTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEKNDVVIGRIPIMLRSC 60 Query: 3226 RCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIESDKKGRLVASV 3047 RCVL KDE ELARLGECPLDPGGYF++KGTEKV+LIQEQLSKNR+II++DKKG + ASV Sbjct: 61 RCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNRVIIDTDKKGNINASV 120 Query: 3046 TSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGMESDQEVVQMVGRDPRYGA 2867 TSSTE KSKTVI M+K K+YL LN F IPIMV+MKAMG+ESDQEVVQMVGRDPRY A Sbjct: 121 TSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGIESDQEVVQMVGRDPRYSA 180 Query: 2866 LLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPRAMKILRDVFVANVPVRQ 2687 LLLPSI+ECA +IYTQE+ALE+LE KVKR TF + ++E RA ILRDVF+ANVPV Sbjct: 181 LLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRAFSILRDVFLANVPVHN 240 Query: 2686 LNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMNSEI 2507 NFRPKC YVAVMLRRM+EA+LNKDAMDDKDYVGNKRLELSGQL+SLLFEDLFKTM SE+ Sbjct: 241 NNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEV 300 Query: 2506 KKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNWDLKRFKMHRKGMTQVLARL 2327 +K D+ L+KPSRSSR D++ +++RD IT GLER +STGN+D+KRFKMHRKGMTQVLARL Sbjct: 301 QKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARL 360 Query: 2326 SFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVT 2147 SFI TLGHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVT Sbjct: 361 SFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVT 420 Query: 2146 TDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGLILGKHRRPKHFAYAMRKLR 1967 TDE+E PLISLCY LGVEDLELLSGEELH NSFLVIFNGLILGKHRRPK FA MRKLR Sbjct: 421 TDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILGKHRRPKCFADVMRKLR 480 Query: 1966 RAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGISRIKEHHMKELRDGVRTFND 1787 RAGKIGEFVSVFVNEKQ CVYIASDGGRVCRPLVIADKGISRIKEHHMKEL DGVR+F+D Sbjct: 481 RAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIKEHHMKELLDGVRSFDD 540 Query: 1786 FLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTILGVCAGLIPFPHHNQSPRN 1607 FLREGL+EYLDVNE+NNALIALYEG+A P+TTHIEIEPFTILGV AGLIP+PHHNQSPRN Sbjct: 541 FLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTILGVIAGLIPYPHHNQSPRN 600 Query: 1606 TYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRTIELVGYDKLGAGQNATVAV 1427 TYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLTTRTIELVGYDKLGAGQNATVAV Sbjct: 601 TYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAV 660 Query: 1426 MSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYANNTSDRIIRPQRVGREAERM 1247 MSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK +AINQKYAN+TSDRI+RP R G AERM Sbjct: 661 MSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTSDRILRPDRTGPGAERM 720 Query: 1246 QILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSLPDSAYKTAIQTYKGPQGETA 1067 QILDDDGLA+PGEII+P+D+YINK+SP+ TR +I S DS Y++A QTYKGP GET Sbjct: 721 QILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQTDSRYRSARQTYKGPDGETC 780 Query: 1066 VVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGIS 887 VVDRVAL SDK+ +LC KF+IRHTRRPE+GDKFSSRHGQKGVCG IVQQED PFSERGI Sbjct: 781 VVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGIC 840 Query: 886 PDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKK 707 PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAFGEPSGHAD VE+ISETLVK Sbjct: 841 PDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADTVESISETLVKH 900 Query: 706 GFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGR 527 GFSY+GKD +YSG G PLQAYIFMGPIYYQKLKHMVLDKMHAR GPRVMLTRQPTEGR Sbjct: 901 GFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGR 960 Query: 526 SRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQEDISTISSKLAFVPH-AKMGI 350 +R+GGLR+GEMERDCLIAYGASM+IFERLM+SSDPFEVQ + + L + H K GI Sbjct: 961 ARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQ--VCRVCGLLGYYNHKLKAGI 1018 Query: 349 TS 344 S Sbjct: 1019 CS 1020 Score = 98.6 bits (244), Expect = 2e-17 Identities = 44/51 (86%), Positives = 48/51 (94%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY+NHKLK GICSTCKNGDNIS+M+LPYACKLL QELQSMN+VPRLKL EA Sbjct: 1008 GYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1058 >ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum tuberosum] Length = 1151 Score = 1667 bits (4316), Expect = 0.0 Identities = 829/1078 (76%), Positives = 939/1078 (87%), Gaps = 3/1078 (0%) Frame = -3 Query: 3634 IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDV- 3458 IDKQ+L++P+K+ VDK+QL+PEFLKVRGLVKQHL SFNY V T IKKIV AN+ I S Sbjct: 20 IDKQYLASPIKNSVDKYQLIPEFLKVRGLVKQHLASFNYLVKTDIKKIVRANHEIRSSTR 79 Query: 3457 DPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVM 3278 DP +YL+Y+DVRIGEPS+T D L+P CRL+D TYAAPI V+++YT + + +++ Sbjct: 80 DPNIYLRYRDVRIGEPSMTYDGVREKLSPQKCRLADLTYAAPIFVTVDYTMTRNGQISML 139 Query: 3277 TKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 3098 T+ ++VI RMPIMLRSC CVL KDE++LA+LGECPLDPGGYF+V G EKVILIQEQLSK Sbjct: 140 TQKDVVIARMPIMLRSCLCVLYEKDEEQLAKLGECPLDPGGYFIVNGREKVILIQEQLSK 199 Query: 3097 NRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGME 2918 NRIII++D+KG + ASV STE TKSKT+I M+KEK+YL+LN F +PIMV+MKAMGME Sbjct: 200 NRIIIDTDRKGCVQASVICSTEKTKSKTIIKMEKEKVYLELNMFKTKVPIMVVMKAMGME 259 Query: 2917 SDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLE--KKVKRFTFSNASLEKE 2744 SDQEVVQM+GRDPRY ALLLPSI+ECA +YTQ QALEFLE K + ++ NA +EK Sbjct: 260 SDQEVVQMIGRDPRYSALLLPSIEECADLKLYTQHQALEFLESDKMLTMPSYYNAPVEKG 319 Query: 2743 PRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELS 2564 RA+ ILRD+F+A+VPV Q NFR KCIYVAVM+RR+MEAILNKDAMDDKDYVGNKRLELS Sbjct: 320 ARALSILRDMFLAHVPVHQHNFRKKCIYVAVMMRRVMEAILNKDAMDDKDYVGNKRLELS 379 Query: 2563 GQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNW 2384 GQL+SLLFEDLFKTMN E+++ D + S+SS L + H + IT L+R +STGNW Sbjct: 380 GQLLSLLFEDLFKTMNDEVRREFDAS----SKSSDL-LYHVKKSNRITVELQRTLSTGNW 434 Query: 2383 DLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2204 D+KRF+MHRKGMT+VLARLS+I TLG+MTKI PQFEKSRKVSGPRALQPSQ+GM+CPCDT Sbjct: 435 DIKRFRMHRKGMTEVLARLSYIGTLGYMTKIKPQFEKSRKVSGPRALQPSQFGMICPCDT 494 Query: 2203 PEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGL 2024 PEGEACGLVKNLALMTHVTTDED P++SLCY LGVEDLE LS ELHT NS+L+I NGL Sbjct: 495 PEGEACGLVKNLALMTHVTTDEDARPIMSLCYDLGVEDLEQLSAAELHTPNSYLIILNGL 554 Query: 2023 ILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGIS 1844 ILGKH+ P+ FA MRKLRRAG+I EFVS+FVN+KQCCVYIASDGGRVCRPLVIA+KG+S Sbjct: 555 ILGKHKSPQRFANGMRKLRRAGRIREFVSIFVNDKQCCVYIASDGGRVCRPLVIAEKGVS 614 Query: 1843 RIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTI 1664 RIKEHHM ELRDGVR FN FLR+GL+EYLDVNE+NN+LIALYE EA P+TTHIEIEPFTI Sbjct: 615 RIKEHHMNELRDGVRDFNSFLRDGLIEYLDVNEENNSLIALYEKEATPDTTHIEIEPFTI 674 Query: 1663 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRT 1484 LGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD L+Y+LVYPQRPLLTTRT Sbjct: 675 LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYLLVYPQRPLLTTRT 734 Query: 1483 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYAN 1304 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK +AI QKY N Sbjct: 735 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYAAICQKYKN 794 Query: 1303 NTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSLP 1124 TSDR+I+PQR G EAE+MQILDDDGLASPGEIIR DIYINK+SP T +TS M LP Sbjct: 795 LTSDRLIKPQRQGSEAEKMQILDDDGLASPGEIIRNRDIYINKESPTVTITQVTSPMGLP 854 Query: 1123 DSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKG 944 DSAYK++ QTYKG +GE V+DRVAL SD++NNL KF+IR TRRPEIGDKFSSRHGQKG Sbjct: 855 DSAYKSSRQTYKGTEGEPTVIDRVALHSDENNNLSIKFMIRQTRRPEIGDKFSSRHGQKG 914 Query: 943 VCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFG 764 VCGIIVQQEDLPFSERGI PDLIMNPHGFPSRMT+GKMIELLG KAGVS GRFHYGSAFG Sbjct: 915 VCGIIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFG 974 Query: 763 EPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKM 584 EPSGHAD V+AISETLVK GFSY+GKDF+YSG G PLQAYIFMGPIYYQKLKHMVLDKM Sbjct: 975 EPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKM 1034 Query: 583 HARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQ 410 HAR GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM+I ERLM+SSDPFE Q Sbjct: 1035 HARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIHERLMLSSDPFEAQ 1092 Score = 95.5 bits (236), Expect = 2e-16 Identities = 42/51 (82%), Positives = 49/51 (96%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY+N+KLK GICS CKNG+N+ST++LPYACKLLFQELQSMN+VPRLKLTEA Sbjct: 1101 GYYNYKLKIGICSMCKNGENMSTLKLPYACKLLFQELQSMNIVPRLKLTEA 1151 >ref|NP_199327.4| DNA-directed RNA polymerase RPC2 [Arabidopsis thaliana] gi|332007826|gb|AED95209.1| DNA-directed RNA polymerase RPC2 [Arabidopsis thaliana] Length = 1161 Score = 1667 bits (4316), Expect = 0.0 Identities = 826/1095 (75%), Positives = 948/1095 (86%), Gaps = 14/1095 (1%) Frame = -3 Query: 3652 SSGEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNL 3473 ++ + IDK+ LSAP+KS DKFQL+PEFLKVRGLVKQHLDSFNYF+N GI KIV AN+ Sbjct: 11 TNDDHFIDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIHKIVKANSR 70 Query: 3472 ITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHD 3293 ITS VDP +YL++K VR+GEPSI + PHMCRL+D TYAAPI V+IEY +GSH Sbjct: 71 ITSTVDPSIYLRFKKVRVGEPSIINVNTVENINPHMCRLADMTYAAPIFVNIEYVHGSHG 130 Query: 3292 KKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQ 3113 K K+N++IGRMPIMLRSCRCVL+ KDE+ELARLGECPLDPGGYF++KGTEKV+LIQ Sbjct: 131 NKAKSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFIIKGTEKVLLIQ 190 Query: 3112 EQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMK 2933 EQLSKNRIII+SDKKG + ASVTSSTE TKSKTVI M+KEKIYL L+ F IPI++++K Sbjct: 191 EQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHRFVKKIPIIIVLK 250 Query: 2932 AMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASL 2753 AMGMESDQE+VQMVGRDPR+ A LLPSI+EC + + TQ+QAL++LE KVK+ ++ Sbjct: 251 AMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKISYGTPP- 309 Query: 2752 EKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRL 2573 EK+ RA+ ILRD+F+A+VPV NFR KC YV VMLRRM+EA+LNKDAMDDKDYVGNKRL Sbjct: 310 EKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRL 369 Query: 2572 ELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRD---IITHGLERA 2402 ELSGQLISLLFEDLFKTM SE KN D L KP R+SR D + L +D I+ GLER Sbjct: 370 ELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERT 429 Query: 2401 ISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGM 2222 +STGN+D+KRF+MHRKGMTQVL RLSFI ++G +TKISPQFEKSRKVSGPR+LQPSQWGM Sbjct: 430 LSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPRSLQPSQWGM 489 Query: 2221 LCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFL 2042 LCPCDTPEGE+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT +SFL Sbjct: 490 LCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFL 549 Query: 2041 VIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVI 1862 VI NGLILGKH RP++FA ++R+LRRAGKIGEFVSVF NEKQ CVY+ASD GRVCRPLVI Sbjct: 550 VILNGLILGKHSRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDVGRVCRPLVI 609 Query: 1861 ADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGE--------- 1709 ADKGISR+K+HHMKEL+DGVRTF+DF+R+GL+EYLDVNE+NNALIALYE + Sbjct: 610 ADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDGTTELDEGA 669 Query: 1708 --AEPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDT 1535 A+ +TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDT Sbjct: 670 EAAKADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDT 729 Query: 1534 LIYMLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1355 L+Y+LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS+SGYDIEDAIVMNKSSLDRGFG Sbjct: 730 LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSFSGYDIEDAIVMNKSSLDRGFG 789 Query: 1354 RCIVMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINK 1175 RCIVMKK+ A++QKY N T+DRI+ PQR G +AE+MQILDDDGLA+PGEIIRP+DIYINK Sbjct: 790 RCIVMKKIVAMSQKYDNCTADRILIPQRTGPDAEKMQILDDDGLATPGEIIRPNDIYINK 849 Query: 1174 QSPINTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHT 995 Q P++T TS++S DS Y+ A + +KGP+GET VVDRVAL SDK LC K+IIRHT Sbjct: 850 QVPVDTVTKFTSALS--DSQYRPAREYFKGPEGETQVVDRVALCSDKKGQLCIKYIIRHT 907 Query: 994 RRPEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLG 815 RRPE+GDKFSSRHGQKGVCGII+QQED PFSE GI PDLIMNPHGFPSRMT+GKMIELLG Sbjct: 908 RRPELGDKFSSRHGQKGVCGIIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLG 967 Query: 814 GKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIF 635 KAGVS GRFHYGSAFGE SGHAD+VE IS TLV+KGFSYSGKD LYSG G P++AYIF Sbjct: 968 SKAGVSCGRFHYGSAFGERSGHADKVETISATLVEKGFSYSGKDLLYSGISGEPVEAYIF 1027 Query: 634 MGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMM 455 MGPIYYQKLKHMVLDKMHAR GPRVM+TRQPTEG+S++GGLR+GEMERDCLIAYGASM+ Sbjct: 1028 MGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASML 1087 Query: 454 IFERLMISSDPFEVQ 410 I+ERLMISSDPFEVQ Sbjct: 1088 IYERLMISSDPFEVQ 1102 Score = 97.1 bits (240), Expect = 6e-17 Identities = 43/51 (84%), Positives = 49/51 (96%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 255 GY+N+KLK +C+TCKNGDNI+TM+LPYACKLLFQELQSMNVVPRLKLTEA Sbjct: 1111 GYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQELQSMNVVPRLKLTEA 1161 >dbj|BAB11387.1| DNA-directed RNA polymerase subunit [Arabidopsis thaliana] Length = 1194 Score = 1665 bits (4313), Expect = 0.0 Identities = 822/1084 (75%), Positives = 944/1084 (87%), Gaps = 3/1084 (0%) Frame = -3 Query: 3652 SSGEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNL 3473 ++ + IDK+ LSAP+KS DKFQL+PEFLKVRGLVKQHLDSFNYF+N GI KIV AN+ Sbjct: 32 TNDDHFIDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIHKIVKANSR 91 Query: 3472 ITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHD 3293 ITS VDP +YL++K VR+GEPSI + PHMCRL+D TYAAPI V+IEY +GSH Sbjct: 92 ITSTVDPSIYLRFKKVRVGEPSIINVNTVENINPHMCRLADMTYAAPIFVNIEYVHGSHG 151 Query: 3292 KKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQ 3113 K K+N++IGRMPIMLRSCRCVL+ KDE+ELARLGECPLDPGGYF++KGTEKV+LIQ Sbjct: 152 NKAKSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFIIKGTEKVLLIQ 211 Query: 3112 EQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMK 2933 EQLSKNRIII+SDKKG + ASVTSSTE TKSKTVI M+KEKIYL L+ F IPI++++K Sbjct: 212 EQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHRFVKKIPIIIVLK 271 Query: 2932 AMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASL 2753 AMGMESDQE+VQMVGRDPR+ A LLPSI+EC + + TQ+QAL++LE KVK+ ++ Sbjct: 272 AMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKISYGTPP- 330 Query: 2752 EKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRL 2573 EK+ RA+ ILRD+F+A+VPV NFR KC YV VMLRRM+EA+LNKDAMDDKDYVGNKRL Sbjct: 331 EKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRL 390 Query: 2572 ELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDI---ITHGLERA 2402 ELSGQLISLLFEDLFKTM SE KN D L KP R+SR D + L +D I+ GLER Sbjct: 391 ELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERT 450 Query: 2401 ISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGM 2222 +STGN+D+KRF+MHRKGMTQVL RLSFI ++G +TKISPQFEKSRKVSGPR+LQPSQWGM Sbjct: 451 LSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPRSLQPSQWGM 510 Query: 2221 LCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFL 2042 LCPCDTPEGE+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT +SFL Sbjct: 511 LCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFL 570 Query: 2041 VIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVI 1862 VI NGLILGKH RP++FA ++R+LRRAGKIGEFVSVF NEKQ CVY+ASD GRVCRPLVI Sbjct: 571 VILNGLILGKHSRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDVGRVCRPLVI 630 Query: 1861 ADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIE 1682 ADKGISR+K+HHMKEL+DGVRTF+DF+R+GL+EYLDVNE+NNAL+ L A+ +TTHIE Sbjct: 631 ADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALVCLRAEAAKADTTHIE 690 Query: 1681 IEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRP 1502 IEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y+LVYPQRP Sbjct: 691 IEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLYLLVYPQRP 750 Query: 1501 LLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAI 1322 LLTTRTIELVGYDKLGAGQNATVAVMS+SGYDIEDAIVMNKSSLDRGFGRCIVMKK+ A+ Sbjct: 751 LLTTRTIELVGYDKLGAGQNATVAVMSFSGYDIEDAIVMNKSSLDRGFGRCIVMKKIVAM 810 Query: 1321 NQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTIT 1142 +QKY N T+DRI+ PQR G +AE+MQILDDDGLA+PGEIIRP+DIYINKQ P++T T Sbjct: 811 SQKYDNCTADRILIPQRTGPDAEKMQILDDDGLATPGEIIRPNDIYINKQVPVDTVTKFT 870 Query: 1141 SSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSS 962 S++S DS Y+ A + +KGP+GET VVDRVAL SDK LC K+IIRHTRRPE+GDKFSS Sbjct: 871 SALS--DSQYRPAREYFKGPEGETQVVDRVALCSDKKGQLCIKYIIRHTRRPELGDKFSS 928 Query: 961 RHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFH 782 RHGQKGVCGII+QQED PFSE GI PDLIMNPHGFPSRMT+GKMIELLG KAGVS GRFH Sbjct: 929 RHGQKGVCGIIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFH 988 Query: 781 YGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKH 602 YGSAFGE SGHAD+VE IS TLV+KGFSYSGKD LYSG G P++AYIFMGPIYYQKLKH Sbjct: 989 YGSAFGERSGHADKVETISATLVEKGFSYSGKDLLYSGISGEPVEAYIFMGPIYYQKLKH 1048 Query: 601 MVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDP 422 MVLDKMHAR GPRVM+TRQPTEG+S++GGLR+GEMERDCLIAYGASM+I+ERLMISSDP Sbjct: 1049 MVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMISSDP 1108 Query: 421 FEVQ 410 FEVQ Sbjct: 1109 FEVQ 1112 Score = 69.3 bits (168), Expect = 1e-08 Identities = 30/49 (61%), Positives = 43/49 (87%) Frame = -2 Query: 407 GYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLT 261 GY+N+KLK +C+TCKNGDNI+TM+LPYACKLLFQ ++++ + +LKL+ Sbjct: 1121 GYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ-VKTIGLFFKLKLS 1168