BLASTX nr result
ID: Akebia25_contig00007098
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00007098
(1187 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymera... 370 e-100
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera] 364 5e-98
ref|XP_007217752.1| hypothetical protein PRUPE_ppa010369mg [Prun... 347 4e-93
gb|EYU21430.1| hypothetical protein MIMGU_mgv1a009886mg [Mimulus... 346 1e-92
ref|XP_006372643.1| RNA polymerase transcriptional regulation me... 342 2e-91
ref|XP_007024366.1| RNA polymerase transcriptional regulation me... 340 5e-91
emb|CBI36012.3| unnamed protein product [Vitis vinifera] 332 2e-88
gb|EXB74612.1| Putative mediator of RNA polymerase II transcript... 331 3e-88
ref|XP_006466167.1| PREDICTED: mediator of RNA polymerase II tra... 331 3e-88
ref|XP_006343025.1| PREDICTED: mediator of RNA polymerase II tra... 330 7e-88
ref|XP_004252362.1| PREDICTED: mediator of RNA polymerase II tra... 330 7e-88
ref|XP_006426448.1| hypothetical protein CICLE_v10026335mg [Citr... 330 9e-88
ref|XP_002515912.1| RNA polymerase II mediator complex subunit, ... 329 1e-87
ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ... 329 2e-87
ref|XP_006585556.1| PREDICTED: mediator of RNA polymerase II tra... 326 1e-86
ref|XP_004235630.1| PREDICTED: mediator of RNA polymerase II tra... 323 7e-86
ref|XP_004235629.1| PREDICTED: mediator of RNA polymerase II tra... 323 7e-86
ref|XP_007135611.1| hypothetical protein PHAVU_010G143300g [Phas... 321 4e-85
ref|XP_003531638.1| PREDICTED: mediator of RNA polymerase II tra... 321 4e-85
gb|AFK47538.1| unknown [Medicago truncatula] 317 6e-84
>ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymerase II transcription
subunit 6 [Vitis vinifera]
Length = 258
Score = 370 bits (951), Expect = e-100
Identities = 187/258 (72%), Positives = 200/258 (77%), Gaps = 2/258 (0%)
Frame = +2
Query: 158 MAATPMMPQN-LTGNPNFDGNLSAAP-PPGTDMTGICFRDQLWLNSYPLDRNLVFDYFAL 331
MA+TPM P N GNPNFDGN A P PPGTDMTGICFRDQLWLNSYPLDRNLVFDYFAL
Sbjct: 1 MASTPMAPPNPAAGNPNFDGNPPAVPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFAL 60
Query: 332 SPFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTP 511
SPFYD +CNNEQLR+RSIHPLDT+HLSKMTG EYML+EVMEPHLFV RKQKRDGPEKVTP
Sbjct: 61 SPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTP 120
Query: 512 MLTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENEATAFEP 691
MLTYY+LDGSIYQAPQLCNVF ARIGR LYH+SKAFTTAA KLEKIG+V+ ENE A E
Sbjct: 121 MLTYYILDGSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALES 180
Query: 692 KVGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAPQ 871
KVGKE IDFK+V RVD ILASLQRKL + P+ QQ PQ
Sbjct: 181 KVGKETIDFKEVMRVDQILASLQRKLPPAPPPPQFPEGYAPPPTAEGEKGPETQQAAEPQ 240
Query: 872 LXXXXXXXXQGPAKRMKF 925
L QGP+KRMKF
Sbjct: 241 LPALDPIIDQGPSKRMKF 258
>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
Length = 253
Score = 364 bits (934), Expect = 5e-98
Identities = 182/250 (72%), Positives = 194/250 (77%), Gaps = 1/250 (0%)
Frame = +2
Query: 179 PQNLTGNPNFDGNLSAAP-PPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDLSC 355
P GNPNFDGN AAP PPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYD +C
Sbjct: 4 PNPAAGNPNFDGNPPAAPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTC 63
Query: 356 NNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLD 535
NNEQLR+RSIHPLDT+HLSKMTG EYML+EVMEPHLFV RKQKRDGPEKVTPMLTYY+LD
Sbjct: 64 NNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILD 123
Query: 536 GSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENEATAFEPKVGKEAID 715
GSIYQAPQLCNVF ARIGR LYH+SKAFTTAA KLEKIG+V+ ENE A E KVGKE ID
Sbjct: 124 GSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKETID 183
Query: 716 FKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAPQLXXXXXXX 895
FK+V RVD ILASLQRKL + P+ QQ PQL
Sbjct: 184 FKEVMRVDQILASLQRKLPPAPPAPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPII 243
Query: 896 XQGPAKRMKF 925
QGP+KRMKF
Sbjct: 244 DQGPSKRMKF 253
>ref|XP_007217752.1| hypothetical protein PRUPE_ppa010369mg [Prunus persica]
gi|462413902|gb|EMJ18951.1| hypothetical protein
PRUPE_ppa010369mg [Prunus persica]
Length = 252
Score = 347 bits (891), Expect = 4e-93
Identities = 176/256 (68%), Positives = 191/256 (74%)
Frame = +2
Query: 158 MAATPMMPQNLTGNPNFDGNLSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSP 337
MA PM P ++ G P A PPGTDMTGICF+DQLWLNSYPLDRNLVFDYFA+SP
Sbjct: 1 MATPPMAPPSMEGTPP----PMAVQPPGTDMTGICFKDQLWLNSYPLDRNLVFDYFAISP 56
Query: 338 FYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPML 517
FYD +CNNEQLR RSIHPLD +HLSKMTG EY L+EVMEPHLFVFRKQKRDGPEKVTPML
Sbjct: 57 FYDWTCNNEQLRQRSIHPLDPSHLSKMTGTEYSLNEVMEPHLFVFRKQKRDGPEKVTPML 116
Query: 518 TYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENEATAFEPKV 697
TYYVLDG+IYQAPQLCNVFAARIGR LY++SKAFTTAA KLEKIG+V+ ENE AFE KV
Sbjct: 117 TYYVLDGTIYQAPQLCNVFAARIGRALYYISKAFTTAASKLEKIGYVDSENETAAFESKV 176
Query: 698 GKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAPQLX 877
KE IDFK+VKRVDHIL SLQRKL + P+ QQ PQ
Sbjct: 177 TKETIDFKEVKRVDHILQSLQRKLPPAPPPPPFPEGYVPAPTAEAENGPETQQAGEPQQP 236
Query: 878 XXXXXXXQGPAKRMKF 925
QGPAKRMKF
Sbjct: 237 QMDPIIDQGPAKRMKF 252
>gb|EYU21430.1| hypothetical protein MIMGU_mgv1a009886mg [Mimulus guttatus]
Length = 328
Score = 346 bits (888), Expect = 1e-92
Identities = 177/262 (67%), Positives = 199/262 (75%), Gaps = 6/262 (2%)
Frame = +2
Query: 158 MAATPMMPQNLTGNPNFDGN------LSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFD 319
MA TPM+P NP DG + A PPPGTDMTGICFRDQLWLN+YPLDRNLVFD
Sbjct: 69 MATTPMIPP-AAANPALDGGAPPPPQMVAPPPPGTDMTGICFRDQLWLNTYPLDRNLVFD 127
Query: 320 YFALSPFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPE 499
YFALSPFYD SCNNEQLR+R+ HPLD +HLSKMTGIEY LSEV+EPHLFVFRKQKRDGPE
Sbjct: 128 YFALSPFYDYSCNNEQLRLRATHPLDLSHLSKMTGIEYSLSEVLEPHLFVFRKQKRDGPE 187
Query: 500 KVTPMLTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENEAT 679
KVTPMLTYYVLDGSIYQAPQLCNVFA+R+GR LYH+SKAF TAA KLEKIG+V+ ENE+T
Sbjct: 188 KVTPMLTYYVLDGSIYQAPQLCNVFASRVGRALYHISKAFNTAASKLEKIGYVDAENEST 247
Query: 680 AFEPKVGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQV 859
+ EPK KE IDFK++KRVDHILASLQRKL +E + D+Q
Sbjct: 248 SSEPKAAKETIDFKELKRVDHILASLQRKLPPAPPPPPFPDGYAPLSTEGEK-SSDSQ-- 304
Query: 860 TAPQLXXXXXXXXQGPAKRMKF 925
+A L QGP+KR+KF
Sbjct: 305 SAEPLPPVDPIIDQGPSKRIKF 326
>ref|XP_006372643.1| RNA polymerase transcriptional regulation mediator-related family
protein [Populus trichocarpa]
gi|550319272|gb|ERP50440.1| RNA polymerase
transcriptional regulation mediator-related family
protein [Populus trichocarpa]
Length = 259
Score = 342 bits (876), Expect = 2e-91
Identities = 174/259 (67%), Positives = 191/259 (73%), Gaps = 3/259 (1%)
Frame = +2
Query: 158 MAATPMMPQ---NLTGNPNFDGNLSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFA 328
MA P++PQ N NP G PPGTDMTGICFRDQLWLN+YPLDRNLVFDYFA
Sbjct: 1 MATPPVLPQLPTNFEANPPPMGPTPPQQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFA 60
Query: 329 LSPFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVT 508
LSPFYD +CNNEQLR +SIHPLD +HL KMTG EYMLSEVMEPHLFVFRKQKRD EKVT
Sbjct: 61 LSPFYDWTCNNEQLRSQSIHPLDLSHLLKMTGTEYMLSEVMEPHLFVFRKQKRDSAEKVT 120
Query: 509 PMLTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENEATAFE 688
PMLTYYVLDGSIYQAPQLC+VFAAR+GR LY++SKAF TAA KLEKIG+V+ ENE A E
Sbjct: 121 PMLTYYVLDGSIYQAPQLCSVFAARVGRALYYISKAFGTAASKLEKIGYVDSENEGAASE 180
Query: 689 PKVGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAP 868
K GKE IDFK+VKR+DHILASLQRKL + + P+ QQ P
Sbjct: 181 SKTGKEVIDFKEVKRIDHILASLQRKLPPAPPPPSFPEGYVPQPTTEEEKGPETQQGGEP 240
Query: 869 QLXXXXXXXXQGPAKRMKF 925
QL QGPAKRMKF
Sbjct: 241 QLPSVDPIIDQGPAKRMKF 259
>ref|XP_007024366.1| RNA polymerase transcriptional regulation mediator-related isoform
1 [Theobroma cacao] gi|508779732|gb|EOY26988.1| RNA
polymerase transcriptional regulation mediator-related
isoform 1 [Theobroma cacao]
Length = 257
Score = 340 bits (873), Expect = 5e-91
Identities = 172/257 (66%), Positives = 190/257 (73%), Gaps = 1/257 (0%)
Frame = +2
Query: 158 MAATPMMPQNLTGNPNFDGNLSAA-PPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALS 334
MA P+ P NF+ PPGTDMTGICFRDQLWLN+YPLDRNL+FDYFALS
Sbjct: 1 MATPPVAPPQAAAAGNFEAPPPLPMQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALS 60
Query: 335 PFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPM 514
PFYD +CNNEQLRM SIHPLD + LSKMTG+EYMLSEVMEP+LFV RKQKRDGPEKVTPM
Sbjct: 61 PFYDWTCNNEQLRMHSIHPLDISQLSKMTGVEYMLSEVMEPNLFVIRKQKRDGPEKVTPM 120
Query: 515 LTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENEATAFEPK 694
L YY+LDGSIYQAPQLCNVFAAR+GR LY++SKAFTTAA KLEKIG+V+ ENE+ FE K
Sbjct: 121 LAYYILDGSIYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYVDTENESETFESK 180
Query: 695 VGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAPQL 874
GKE IDFK+VKRVDHILASLQRKL + DP+NQQ Q
Sbjct: 181 GGKETIDFKEVKRVDHILASLQRKLPPAPPPPPFPEGFIPLATAEAEKDPENQQAVETQP 240
Query: 875 XXXXXXXXQGPAKRMKF 925
QGPAKRMKF
Sbjct: 241 PAIDPIIDQGPAKRMKF 257
>emb|CBI36012.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 332 bits (851), Expect = 2e-88
Identities = 165/226 (73%), Positives = 177/226 (78%)
Frame = +2
Query: 248 MTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDLSCNNEQLRMRSIHPLDTTHLSKMTGI 427
MTGICFRDQLWLNSYPLDRNLVFDYFALSPFYD +CNNEQLR+RSIHPLDT+HLSKMTG
Sbjct: 1 MTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGT 60
Query: 428 EYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLDGSIYQAPQLCNVFAARIGRTLYHV 607
EYML+EVMEPHLFV RKQKRDGPEKVTPMLTYY+LDGSIYQAPQLCNVF ARIGR LYH+
Sbjct: 61 EYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFTARIGRALYHI 120
Query: 608 SKAFTTAALKLEKIGFVNGENEATAFEPKVGKEAIDFKDVKRVDHILASLQRKLXXXXXX 787
SKAFTTAA KLEKIG+V+ ENE A E KVGKE IDFK+V RVD ILASLQRKL
Sbjct: 121 SKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAPPP 180
Query: 788 XXXXXXXXXXXSEADNIDPDNQQVTAPQLXXXXXXXXQGPAKRMKF 925
+ P+ QQ PQL QGP+KRMKF
Sbjct: 181 PQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 226
>gb|EXB74612.1| Putative mediator of RNA polymerase II transcription subunit 6
[Morus notabilis]
Length = 251
Score = 331 bits (849), Expect = 3e-88
Identities = 166/245 (67%), Positives = 184/245 (75%), Gaps = 1/245 (0%)
Frame = +2
Query: 194 GNPNFDGNLSAAPPP-GTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDLSCNNEQL 370
G P +G A PPP GTDMTGICFRDQLWLNS+PLDRNLVFDYFALSPFYD +CNNEQL
Sbjct: 7 GAPGMEGRPPAPPPPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQL 66
Query: 371 RMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLDGSIYQ 550
RMRSIHPLD THLSKMTG EYML+EV+EP+LFV RKQKRDGPEKVTPMLTYYVLDGSIYQ
Sbjct: 67 RMRSIHPLDLTHLSKMTGTEYMLNEVLEPNLFVIRKQKRDGPEKVTPMLTYYVLDGSIYQ 126
Query: 551 APQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENEATAFEPKVGKEAIDFKDVK 730
APQLCNVFAAR GR LY++ KAFT AA KLEKIG+V+ ENE + K+GKE IDFK++K
Sbjct: 127 APQLCNVFAARAGRALYYLQKAFTNAASKLEKIGYVDSENENAPLDSKIGKETIDFKEMK 186
Query: 731 RVDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAPQLXXXXXXXXQGPA 910
R+DHILASLQRKL + P+ QQ Q QGPA
Sbjct: 187 RIDHILASLQRKLPPAPPPPPFPEGYVPPQNADSEKGPEAQQAGEAQQAPVDPIIDQGPA 246
Query: 911 KRMKF 925
KRM+F
Sbjct: 247 KRMRF 251
>ref|XP_006466167.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like [Citrus sinensis]
Length = 251
Score = 331 bits (849), Expect = 3e-88
Identities = 171/254 (67%), Positives = 187/254 (73%), Gaps = 1/254 (0%)
Frame = +2
Query: 164 ATPMMPQNLTGNPNFDGNLSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFY 343
ATP NL G P +A PPPGTDMTGICFRDQLWLN+YPLDRN++FDYF LS FY
Sbjct: 2 ATPPPGTNLEGAPP-----AAPPPPGTDMTGICFRDQLWLNTYPLDRNMIFDYFTLSLFY 56
Query: 344 DLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTY 523
D +CNNEQLRMRSIHPLD + LSKMTGIEYMLSEVMEPHLFV RKQKRDGPEKVTPMLTY
Sbjct: 57 DRTCNNEQLRMRSIHPLDISQLSKMTGIEYMLSEVMEPHLFVIRKQKRDGPEKVTPMLTY 116
Query: 524 YVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENE-ATAFEPKVG 700
YVLDGSIYQAPQLCNVF+ARIGR L+++ KAFTTAA KLEKIG+V+ EN+ T K G
Sbjct: 117 YVLDGSIYQAPQLCNVFSARIGRALHYIQKAFTTAASKLEKIGYVDAENDGGTPLHSKAG 176
Query: 701 KEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAPQLXX 880
KE ID K+VKRVD ILASLQRKL +E DP+ QQ PQ
Sbjct: 177 KETIDLKEVKRVDQILASLQRKLPPAPPPPPFPEGYAPPQTEEAEKDPETQQTAEPQPPA 236
Query: 881 XXXXXXQGPAKRMK 922
QGPAKRMK
Sbjct: 237 IDPIIDQGPAKRMK 250
>ref|XP_006343025.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like [Solanum tuberosum]
Length = 247
Score = 330 bits (846), Expect = 7e-88
Identities = 170/256 (66%), Positives = 191/256 (74%), Gaps = 1/256 (0%)
Frame = +2
Query: 158 MAATPMMPQNLTGNPNFDGNLSAAPP-PGTDMTGICFRDQLWLNSYPLDRNLVFDYFALS 334
MA+TPMMP PN DG+ AAPP PGTDMT ICFRDQLWLN+YPLDRNLVFDYFALS
Sbjct: 1 MASTPMMP------PNADGSAPAAPPLPGTDMTSICFRDQLWLNTYPLDRNLVFDYFALS 54
Query: 335 PFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPM 514
PFYD +CNNEQLR R+IHPLD +H+SKMTG+EY LSEVMEP+LFV RKQKRD PEKVTPM
Sbjct: 55 PFYDWTCNNEQLRARAIHPLDFSHISKMTGMEYTLSEVMEPNLFVIRKQKRDSPEKVTPM 114
Query: 515 LTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENEATAFEPK 694
LTYY+LDGSIYQAPQLCNVFAAR+GR LYH+SKAF TA+ KLEKIG+V EN++ A E K
Sbjct: 115 LTYYILDGSIYQAPQLCNVFAARLGRALYHISKAFGTASSKLEKIGYVESENDSQASETK 174
Query: 695 VGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAPQL 874
KEAIDFK++KRVDHILASLQRKL + +P Q Q
Sbjct: 175 PAKEAIDFKELKRVDHILASLQRKL----PPVPPPPPFPEGYAPPSTSEPSENQQPETQP 230
Query: 875 XXXXXXXXQGPAKRMK 922
QGP+KRMK
Sbjct: 231 PPIDPIIDQGPSKRMK 246
>ref|XP_004252362.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform 1 [Solanum lycopersicum]
Length = 251
Score = 330 bits (846), Expect = 7e-88
Identities = 171/256 (66%), Positives = 191/256 (74%), Gaps = 1/256 (0%)
Frame = +2
Query: 158 MAATPMMPQNLTGNPNFDGNLSAAPP-PGTDMTGICFRDQLWLNSYPLDRNLVFDYFALS 334
M TP+M GN NFDG A PP PGTDMTGICFRDQLWLN+YPLDRNLVFDYFALS
Sbjct: 1 MTMTPVMAP--MGNANFDGGAPALPPQPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALS 58
Query: 335 PFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPM 514
PFYD +CNNEQLR RSIHPLDT+HLSKMTG EYMLSEVMEP+LFV RKQKRDGPEKVTPM
Sbjct: 59 PFYDWTCNNEQLRSRSIHPLDTSHLSKMTGSEYMLSEVMEPNLFVIRKQKRDGPEKVTPM 118
Query: 515 LTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENEATAFEPK 694
LTYY+LDGSIYQAPQLCNVFA R+GR LYH+SKAF+ A+ KLEK G+V ENE+ A EPK
Sbjct: 119 LTYYILDGSIYQAPQLCNVFAGRLGRALYHISKAFSFASSKLEKTGYVASENESAASEPK 178
Query: 695 VGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAPQL 874
KE IDFK++KRVDHI ASLQR L S A+ + + ++ QL
Sbjct: 179 AAKETIDFKELKRVDHIFASLQRTL-PPVPPPPPFPEGYVPPSTAEASENEQEET---QL 234
Query: 875 XXXXXXXXQGPAKRMK 922
QGP+KRMK
Sbjct: 235 PPVDPIIDQGPSKRMK 250
>ref|XP_006426448.1| hypothetical protein CICLE_v10026335mg [Citrus clementina]
gi|557528438|gb|ESR39688.1| hypothetical protein
CICLE_v10026335mg [Citrus clementina]
Length = 251
Score = 330 bits (845), Expect = 9e-88
Identities = 170/254 (66%), Positives = 187/254 (73%), Gaps = 1/254 (0%)
Frame = +2
Query: 164 ATPMMPQNLTGNPNFDGNLSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFY 343
ATP NL G P +A PPPGTDMTGICFRDQLWLN+YPLDRN++FDYF LS FY
Sbjct: 2 ATPPPGANLEGAPP-----AAPPPPGTDMTGICFRDQLWLNTYPLDRNMIFDYFTLSLFY 56
Query: 344 DLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTY 523
D +CNNEQLRMRSIHPLD + LSKMTGIEYMLSEVMEPHLFV RKQKRDGPEKVTPMLTY
Sbjct: 57 DRTCNNEQLRMRSIHPLDISQLSKMTGIEYMLSEVMEPHLFVIRKQKRDGPEKVTPMLTY 116
Query: 524 YVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENE-ATAFEPKVG 700
YVLDGSIYQAPQLCNVF+ARIGR L+++ KAFTTAA KLEKIG+V+ EN+ T K G
Sbjct: 117 YVLDGSIYQAPQLCNVFSARIGRALHYIQKAFTTAASKLEKIGYVDAENDGGTPLHSKAG 176
Query: 701 KEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAPQLXX 880
KE ID K+VKRVD ILASLQRKL +E DP+ QQ PQ
Sbjct: 177 KETIDLKEVKRVDQILASLQRKLPPAPPPPPFPEGYAPPQTEEAEKDPETQQTAEPQPPA 236
Query: 881 XXXXXXQGPAKRMK 922
QGPAKR+K
Sbjct: 237 IDPIIDQGPAKRVK 250
>ref|XP_002515912.1| RNA polymerase II mediator complex subunit, putative [Ricinus
communis] gi|223544817|gb|EEF46332.1| RNA polymerase II
mediator complex subunit, putative [Ricinus communis]
Length = 251
Score = 329 bits (844), Expect = 1e-87
Identities = 169/244 (69%), Positives = 188/244 (77%), Gaps = 3/244 (1%)
Frame = +2
Query: 203 NFDGN-LSAAPP--PGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDLSCNNEQLR 373
NFDGN L+ APP PGTDMTGICFRDQLWLN+YPLDRNL+FDYFALSPFYD +CNNEQLR
Sbjct: 9 NFDGNPLAPAPPQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLR 68
Query: 374 MRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLDGSIYQA 553
++SIHPLD +HLSKMTG EYML+EV+EP+LFV RKQKRD PEKVTPMLTYYVLDGSIYQA
Sbjct: 69 LQSIHPLDLSHLSKMTGTEYMLNEVIEPNLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQA 128
Query: 554 PQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENEATAFEPKVGKEAIDFKDVKR 733
PQLCNVFAARIGR LYH+SKAFTTAA KLEKIG+V+ E E A E KVGKE IDFK+VKR
Sbjct: 129 PQLCNVFAARIGRALYHISKAFTTAASKLEKIGYVD-EGEGVASESKVGKEVIDFKEVKR 187
Query: 734 VDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAPQLXXXXXXXXQGPAK 913
+DHILAS+QRKL + + +Q Q QGPAK
Sbjct: 188 IDHILASIQRKLPPAPPPPPFPEGYVPPATVEAEKGSETRQAVETQPPPVDPIIDQGPAK 247
Query: 914 RMKF 925
RMKF
Sbjct: 248 RMKF 251
>ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 6-like [Cucumis sativus]
Length = 260
Score = 329 bits (843), Expect = 2e-87
Identities = 176/259 (67%), Positives = 195/259 (75%), Gaps = 5/259 (1%)
Frame = +2
Query: 164 ATPMMPQNLTGNPNFDGN-LSAAP-PPGTDMT---GICFRDQLWLNSYPLDRNLVFDYFA 328
ATP P G NF+G L AAP PPGTDMT GICFRDQLWLN+YPLDRNLVFDYFA
Sbjct: 2 ATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTNLPGICFRDQLWLNTYPLDRNLVFDYFA 61
Query: 329 LSPFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVT 508
LSPFYD +CNNEQLRMRSIHPLD + LSKMTGIEYML+EVMEPHLFVFRKQKRDGPEKVT
Sbjct: 62 LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVT 121
Query: 509 PMLTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENEATAFE 688
PMLTYY+LDGSIYQAPQLC+VFAAR+ R LY++SKAFTTA+ KLEKIG+V+ ENE+ E
Sbjct: 122 PMLTYYILDGSIYQAPQLCSVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESE--E 179
Query: 689 PKVGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAP 868
K KE I+FK+VKRVDHILASLQRKL + P+NQQ +
Sbjct: 180 VKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAETEKGPENQQGESQ 239
Query: 869 QLXXXXXXXXQGPAKRMKF 925
Q QGPAKRMKF
Sbjct: 240 Q-PSADPIIDQGPAKRMKF 257
>ref|XP_006585556.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform X2 [Glycine max]
Length = 249
Score = 326 bits (836), Expect = 1e-86
Identities = 163/244 (66%), Positives = 177/244 (72%)
Frame = +2
Query: 194 GNPNFDGNLSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDLSCNNEQLR 373
GN +G A PPGTDMTGICFRDQLWLNS+PLDRNLVFDYFALSPFYD +CNNEQLR
Sbjct: 6 GNQMLEGGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLR 65
Query: 374 MRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLDGSIYQA 553
MRS+HPLD + LSKMTG EYMLSEVMEPHLFV RKQKRD P+KVTPML YYVLDGSIYQA
Sbjct: 66 MRSVHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQA 125
Query: 554 PQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENEATAFEPKVGKEAIDFKDVKR 733
PQLCNVFAARIGR LY++ KAFTTAA KLEKIG+ + ENE E K KE ID K+VKR
Sbjct: 126 PQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYADSENETALLESKTAKETIDIKEVKR 185
Query: 734 VDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAPQLXXXXXXXXQGPAK 913
VDHILASLQRKL + + Q+ Q QGPAK
Sbjct: 186 VDHILASLQRKLPPAPPPPPFPEGYVPPPTAETEKGTETQEAAETQAPTADPIIDQGPAK 245
Query: 914 RMKF 925
RMKF
Sbjct: 246 RMKF 249
>ref|XP_004235630.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform 2 [Solanum lycopersicum]
Length = 247
Score = 323 bits (829), Expect = 7e-86
Identities = 167/256 (65%), Positives = 188/256 (73%), Gaps = 1/256 (0%)
Frame = +2
Query: 158 MAATPMMPQNLTGNPNFDGNLSAAPP-PGTDMTGICFRDQLWLNSYPLDRNLVFDYFALS 334
MA+TPMMP N DG+ APP PGTDMT ICFRDQLWLN+YPLD+NLVFDYFALS
Sbjct: 1 MASTPMMPLNA------DGSAPVAPPLPGTDMTSICFRDQLWLNTYPLDKNLVFDYFALS 54
Query: 335 PFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPM 514
PFYD +CNNEQLR R+IHPLD +H+SKMTG+EY LSEVMEP+LFV RKQKRD PEKVTPM
Sbjct: 55 PFYDWTCNNEQLRARAIHPLDFSHISKMTGMEYTLSEVMEPNLFVIRKQKRDSPEKVTPM 114
Query: 515 LTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENEATAFEPK 694
LTYY+LDGSIYQAPQLCNVFAAR+GR LYH+SKAF TA+ KLEKIG+V EN + A E K
Sbjct: 115 LTYYILDGSIYQAPQLCNVFAARLGRALYHISKAFGTASSKLEKIGYVESENNSQASETK 174
Query: 695 VGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAPQL 874
KEAIDFK++KRVDHILASLQRKL + +P Q Q
Sbjct: 175 PAKEAIDFKELKRVDHILASLQRKL----PAVPLPPPLPEGYAPPSTSEPSENQQPETQP 230
Query: 875 XXXXXXXXQGPAKRMK 922
QGP+KRMK
Sbjct: 231 PPIDPIIDQGPSKRMK 246
>ref|XP_004235629.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform 1 [Solanum lycopersicum]
Length = 248
Score = 323 bits (829), Expect = 7e-86
Identities = 167/256 (65%), Positives = 188/256 (73%), Gaps = 1/256 (0%)
Frame = +2
Query: 158 MAATPMMPQNLTGNPNFDGNLSAAPP-PGTDMTGICFRDQLWLNSYPLDRNLVFDYFALS 334
MA+TPMMP N DG+ APP PGTDMT ICFRDQLWLN+YPLD+NLVFDYFALS
Sbjct: 1 MASTPMMPLNA------DGSAPVAPPLPGTDMTSICFRDQLWLNTYPLDKNLVFDYFALS 54
Query: 335 PFYDLSCNNEQLRMRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPM 514
PFYD +CNNEQLR R+IHPLD +H+SKMTG+EY LSEVMEP+LFV RKQKRD PEKVTPM
Sbjct: 55 PFYDWTCNNEQLRARAIHPLDFSHISKMTGMEYTLSEVMEPNLFVIRKQKRDSPEKVTPM 114
Query: 515 LTYYVLDGSIYQAPQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENEATAFEPK 694
LTYY+LDGSIYQAPQLCNVFAAR+GR LYH+SKAF TA+ KLEKIG+V EN + A E K
Sbjct: 115 LTYYILDGSIYQAPQLCNVFAARLGRALYHISKAFGTASSKLEKIGYVESENNSQASETK 174
Query: 695 VGKEAIDFKDVKRVDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAPQL 874
KEAIDFK++KRVDHILASLQRKL + +P Q Q
Sbjct: 175 PAKEAIDFKELKRVDHILASLQRKL----PAVPLPPPLPEGYAPPSTSEPSENQQPETQP 230
Query: 875 XXXXXXXXQGPAKRMK 922
QGP+KRMK
Sbjct: 231 PPIDPIIDQGPSKRMK 246
>ref|XP_007135611.1| hypothetical protein PHAVU_010G143300g [Phaseolus vulgaris]
gi|561008656|gb|ESW07605.1| hypothetical protein
PHAVU_010G143300g [Phaseolus vulgaris]
Length = 247
Score = 321 bits (822), Expect = 4e-85
Identities = 163/244 (66%), Positives = 177/244 (72%)
Frame = +2
Query: 194 GNPNFDGNLSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDLSCNNEQLR 373
GN +G P PGTDMTGICFRDQLWLNS+PLDRNLVFDYFALSPFYD +CNNEQLR
Sbjct: 6 GNQMMEGG--PPPLPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLR 63
Query: 374 MRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLDGSIYQA 553
MRS+HPLD + LSKMTG EYMLSEVMEPHLFV RKQKRD P+KVTPML YYVLDGSIYQA
Sbjct: 64 MRSVHPLDLSQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQA 123
Query: 554 PQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENEATAFEPKVGKEAIDFKDVKR 733
PQLCNVFAARIGR LY++ KAFTTAA KLEKIG+V+ ENE E K KE ID K+VKR
Sbjct: 124 PQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALVESKTAKETIDIKEVKR 183
Query: 734 VDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAPQLXXXXXXXXQGPAK 913
VDHILASLQRKL + + Q+ Q QGPAK
Sbjct: 184 VDHILASLQRKLPPAPPPPPFPEGYVPPPTAEAEKGTETQEAAETQAPTADPIIDQGPAK 243
Query: 914 RMKF 925
RMKF
Sbjct: 244 RMKF 247
>ref|XP_003531638.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform X1 [Glycine max]
Length = 252
Score = 321 bits (822), Expect = 4e-85
Identities = 163/247 (65%), Positives = 177/247 (71%), Gaps = 3/247 (1%)
Frame = +2
Query: 194 GNPNFDGNLSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDLSCNNEQLR 373
GN +G A PPGTDMTGICFRDQLWLNS+PLDRNLVFDYFALSPFYD +CNNEQLR
Sbjct: 6 GNQMLEGGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLR 65
Query: 374 MRSIHPLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLDGSIYQA 553
MRS+HPLD + LSKMTG EYMLSEVMEPHLFV RKQKRD P+KVTPML YYVLDGSIYQA
Sbjct: 66 MRSVHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQA 125
Query: 554 PQLCNVFAARIGRTLYHVSKAFTTAALKLEKIGF---VNGENEATAFEPKVGKEAIDFKD 724
PQLCNVFAARIGR LY++ KAFTTAA KLEKIG+ + ENE E K KE ID K+
Sbjct: 126 PQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYAGSADSENETALLESKTAKETIDIKE 185
Query: 725 VKRVDHILASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAPQLXXXXXXXXQG 904
VKRVDHILASLQRKL + + Q+ Q QG
Sbjct: 186 VKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAETEKGTETQEAAETQAPTADPIIDQG 245
Query: 905 PAKRMKF 925
PAKRMKF
Sbjct: 246 PAKRMKF 252
>gb|AFK47538.1| unknown [Medicago truncatula]
Length = 248
Score = 317 bits (812), Expect = 6e-84
Identities = 157/239 (65%), Positives = 178/239 (74%)
Frame = +2
Query: 209 DGNLSAAPPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDLSCNNEQLRMRSIH 388
DG + A PPGTDMTGICFRDQLWLN+YPLDR+LVFDYFALSPFYD + NNEQLRMRS H
Sbjct: 10 DGGVPTAQPPGTDMTGICFRDQLWLNTYPLDRDLVFDYFALSPFYDWTSNNEQLRMRSHH 69
Query: 389 PLDTTHLSKMTGIEYMLSEVMEPHLFVFRKQKRDGPEKVTPMLTYYVLDGSIYQAPQLCN 568
PLD++ L+KM GIEY+LSEVMEPHLF+ +KQKRD P+KVTPML YY+LDGSIYQAPQL N
Sbjct: 70 PLDSSQLTKMIGIEYVLSEVMEPHLFIMKKQKRDSPDKVTPMLAYYILDGSIYQAPQLSN 129
Query: 569 VFAARIGRTLYHVSKAFTTAALKLEKIGFVNGENEATAFEPKVGKEAIDFKDVKRVDHIL 748
VFAARIGR LY++ KAFTTAA KLEKIG+V+ ENE T EPKV KE ID K++KRVDHIL
Sbjct: 130 VFAARIGRALYYIEKAFTTAASKLEKIGYVDSENETTIPEPKVAKETIDLKEIKRVDHIL 189
Query: 749 ASLQRKLXXXXXXXXXXXXXXXXXSEADNIDPDNQQVTAPQLXXXXXXXXQGPAKRMKF 925
ASLQRKL + P+ Q+ QGPAKRMKF
Sbjct: 190 ASLQRKLPPAPPPPPFPEGYVPPSTAETEKGPETQEAAESLAPTVDPILDQGPAKRMKF 248