BLASTX nr result

ID: Akebia25_contig00005813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00005813
         (490 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007038223.1| Mediator of RNA polymerase II transcription ...    56   5e-06
gb|EMS64101.1| Mediator of RNA polymerase II transcription subun...    56   5e-06
ref|XP_004307766.1| PREDICTED: mediator of RNA polymerase II tra...    56   5e-06
ref|XP_004307765.1| PREDICTED: mediator of RNA polymerase II tra...    56   5e-06
ref|XP_007218431.1| hypothetical protein PRUPE_ppa011632mg [Prun...    56   5e-06
ref|XP_007218430.1| hypothetical protein PRUPE_ppa011632mg [Prun...    56   5e-06
dbj|BAK03089.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   5e-06
gb|EXC21078.1| Mediator of RNA polymerase II transcription subun...    55   8e-06
ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II tra...    55   8e-06
gb|ABK24720.1| unknown [Picea sitchensis]                              55   8e-06

>ref|XP_007038223.1| Mediator of RNA polymerase II transcription subunit 31 isoform 3,
           partial [Theobroma cacao] gi|508775468|gb|EOY22724.1|
           Mediator of RNA polymerase II transcription subunit 31
           isoform 3, partial [Theobroma cacao]
          Length = 186

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = -1

Query: 118 IYFNYLDLAQNRYFDDGTFISYLEYL*YWQQPQYTNFIM 2
           ++    DLAQNRYF+D  FI YL+YL YWQ+P+Y  FIM
Sbjct: 11  VFLRTWDLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIM 49


>gb|EMS64101.1| Mediator of RNA polymerase II transcription subunit 31 [Triticum
           urartu]
          Length = 215

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = -1

Query: 118 IYFNYLDLAQNRYFDDGTFISYLEYL*YWQQPQYTNFIM 2
           IY NYL  AQNRYF+D  FI YL+YL YWQ+P+Y  +IM
Sbjct: 58  IYINYL--AQNRYFEDEAFIGYLKYLKYWQRPEYIKYIM 94


>ref|XP_004307766.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           31-like isoform 2 [Fragaria vesca subsp. vesca]
          Length = 201

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/38 (65%), Positives = 30/38 (78%)
 Frame = -1

Query: 115 YFNYLDLAQNRYFDDGTFISYLEYL*YWQQPQYTNFIM 2
           Y +YL  AQNRYF+D  FI YL+YL YWQ+P+YT FIM
Sbjct: 42  YIHYL--AQNRYFEDEAFIGYLKYLQYWQRPEYTKFIM 77


>ref|XP_004307765.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           31-like isoform 1 [Fragaria vesca subsp. vesca]
          Length = 203

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/38 (65%), Positives = 30/38 (78%)
 Frame = -1

Query: 115 YFNYLDLAQNRYFDDGTFISYLEYL*YWQQPQYTNFIM 2
           Y +YL  AQNRYF+D  FI YL+YL YWQ+P+YT FIM
Sbjct: 42  YIHYL--AQNRYFEDEAFIGYLKYLQYWQRPEYTKFIM 77


>ref|XP_007218431.1| hypothetical protein PRUPE_ppa011632mg [Prunus persica]
           gi|462414893|gb|EMJ19630.1| hypothetical protein
           PRUPE_ppa011632mg [Prunus persica]
          Length = 202

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/38 (65%), Positives = 30/38 (78%)
 Frame = -1

Query: 115 YFNYLDLAQNRYFDDGTFISYLEYL*YWQQPQYTNFIM 2
           Y +YL  AQNRYF+D  FI YL+YL YWQ+P+YT FIM
Sbjct: 46  YIHYL--AQNRYFEDEAFIGYLKYLQYWQRPEYTKFIM 81


>ref|XP_007218430.1| hypothetical protein PRUPE_ppa011632mg [Prunus persica]
           gi|462414892|gb|EMJ19629.1| hypothetical protein
           PRUPE_ppa011632mg [Prunus persica]
          Length = 200

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/38 (65%), Positives = 30/38 (78%)
 Frame = -1

Query: 115 YFNYLDLAQNRYFDDGTFISYLEYL*YWQQPQYTNFIM 2
           Y +YL  AQNRYF+D  FI YL+YL YWQ+P+YT FIM
Sbjct: 46  YIHYL--AQNRYFEDEAFIGYLKYLQYWQRPEYTKFIM 81


>dbj|BAK03089.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 206

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = -1

Query: 118 IYFNYLDLAQNRYFDDGTFISYLEYL*YWQQPQYTNFIM 2
           IY NYL  AQNRYF+D  FI YL+YL YWQ+P+Y  +IM
Sbjct: 51  IYINYL--AQNRYFEDEAFIGYLKYLKYWQRPEYIKYIM 87


>gb|EXC21078.1| Mediator of RNA polymerase II transcription subunit 31 [Morus
           notabilis]
          Length = 218

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = -1

Query: 115 YFNYLDLAQNRYFDDGTFISYLEYL*YWQQPQYTNFIM 2
           Y +YL  AQNRYF+D  FI YL+YL YWQQP+Y  FIM
Sbjct: 46  YIHYL--AQNRYFEDEAFIGYLKYLQYWQQPEYIKFIM 81


>ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
           [Vitis vinifera] gi|297737389|emb|CBI26590.3| unnamed
           protein product [Vitis vinifera]
          Length = 198

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = -1

Query: 115 YFNYLDLAQNRYFDDGTFISYLEYL*YWQQPQYTNFIM 2
           Y +YL  AQNRYF+D  FI YL+YL YWQQP+Y  FIM
Sbjct: 46  YIHYL--AQNRYFEDEAFIGYLKYLQYWQQPEYIKFIM 81


>gb|ABK24720.1| unknown [Picea sitchensis]
          Length = 189

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = -1

Query: 115 YFNYLDLAQNRYFDDGTFISYLEYL*YWQQPQYTNFIM 2
           Y +YL  AQNRYFDD  FI YL+YL YWQ+P+Y  FIM
Sbjct: 46  YIHYL--AQNRYFDDEAFIGYLKYLQYWQRPEYIKFIM 81


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