BLASTX nr result

ID: Akebia25_contig00005802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00005802
         (786 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523906.1| RNA-binding region-containing protein, putat...    75   2e-11
emb|CBI31519.3| unnamed protein product [Vitis vinifera]               74   6e-11
ref|XP_006436202.1| hypothetical protein CICLE_v10032535mg [Citr...    69   1e-09
ref|XP_004237522.1| PREDICTED: uncharacterized protein LOC101251...    69   1e-09
ref|XP_004169901.1| PREDICTED: uncharacterized protein LOC101231...    67   6e-09
ref|XP_004143608.1| PREDICTED: uncharacterized protein LOC101202...    67   6e-09
ref|XP_004237521.1| PREDICTED: uncharacterized protein LOC101251...    65   2e-08
ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265...    65   2e-08
ref|XP_006485938.1| PREDICTED: RNA-binding protein 38-like isofo...    65   3e-08
ref|XP_002312040.1| RNA recognition motif-containing family prot...    65   3e-08
ref|XP_006340455.1| PREDICTED: RNA-binding protein 38-like isofo...    63   1e-07
ref|XP_007009716.1| RNA-binding family protein isoform 2 [Theobr...    63   1e-07
gb|EXC19488.1| RNA-binding protein 38 [Morus notabilis]                63   1e-07
ref|XP_002315274.1| RNA recognition motif-containing family prot...    62   2e-07
ref|XP_006340454.1| PREDICTED: RNA-binding protein 38-like isofo...    60   9e-07
ref|XP_007220834.1| hypothetical protein PRUPE_ppa026384mg, part...    58   3e-06
ref|XP_007009717.1| RNA-binding family protein isoform 3 [Theobr...    58   4e-06
ref|XP_007009715.1| RNA-binding family protein isoform 1 [Theobr...    58   4e-06

>ref|XP_002523906.1| RNA-binding region-containing protein, putative [Ricinus communis]
           gi|223536836|gb|EEF38475.1| RNA-binding
           region-containing protein, putative [Ricinus communis]
          Length = 256

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 42/88 (47%), Positives = 49/88 (55%), Gaps = 15/88 (17%)
 Frame = -1

Query: 786 KLSYGSGGPXXXXAYMNGHYSQMYPGQGMMPAVYHHHHQPLYQFHRSHTMGVPTHIFP-- 613
           KLSY  G       YMNGH+SQ+YPGQ +M A       PLY FH+S TMG+P HIFP  
Sbjct: 175 KLSYTGGS------YMNGHFSQVYPGQAIMGANTLMPMYPLYHFHQSQTMGLPAHIFPQT 228

Query: 612 -------------SPPSMAPNTSCLAVE 568
                         PPS+AP+  CLAVE
Sbjct: 229 TAGPITTVPTIMSKPPSIAPSPVCLAVE 256


>emb|CBI31519.3| unnamed protein product [Vitis vinifera]
          Length = 216

 Score = 73.9 bits (180), Expect = 6e-11
 Identities = 42/88 (47%), Positives = 47/88 (53%), Gaps = 15/88 (17%)
 Frame = -1

Query: 786 KLSYGSGGPXXXXAYMNGHYSQMYPGQGMMPAVYHHHHQPLYQFHRSHTMGVPTHIFP-- 613
           KLSY  G       YMNGH+SQ+YPGQ M+ A       P Y FH+S TMG P H+FP  
Sbjct: 135 KLSYTGGS------YMNGHFSQVYPGQAMVGANALMPMYPFYHFHQSQTMGHPAHMFPPT 188

Query: 612 -------------SPPSMAPNTSCLAVE 568
                         P SMAPNT CLAVE
Sbjct: 189 TVGPMPTVPAIISKPTSMAPNTVCLAVE 216


>ref|XP_006436202.1| hypothetical protein CICLE_v10032535mg [Citrus clementina]
           gi|568865147|ref|XP_006485939.1| PREDICTED: RNA-binding
           protein 38-like isoform X2 [Citrus sinensis]
           gi|557538398|gb|ESR49442.1| hypothetical protein
           CICLE_v10032535mg [Citrus clementina]
          Length = 252

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 42/94 (44%), Positives = 50/94 (53%), Gaps = 21/94 (22%)
 Frame = -1

Query: 786 KLSYGSGGPXXXXAYMNGHYSQMYPGQGMMPA------VYHHHHQPLYQFHRSHTMGVPT 625
           KLSY  G       Y+NGH+ QMYPGQ ++ A      +Y     PLY FH+S TMG+P 
Sbjct: 170 KLSYTGGS------YVNGHFPQMYPGQPIVGATNTLMPIY-----PLYHFHQSQTMGLPA 218

Query: 624 HIFP---------------SPPSMAPNTSCLAVE 568
           HIFP                P S+APNT CLAVE
Sbjct: 219 HIFPPTTAGHMTTVPAIISKPASIAPNTVCLAVE 252


>ref|XP_004237522.1| PREDICTED: uncharacterized protein LOC101251083 isoform 2 [Solanum
           lycopersicum]
          Length = 241

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 41/86 (47%), Positives = 49/86 (56%), Gaps = 13/86 (15%)
 Frame = -1

Query: 786 KLSYGSGGPXXXXAYMNGHYSQMYPGQGMMPAVYHHHHQPLYQF-HRSHTMGVPTHIF-- 616
           K+SY  GG      Y+NGH+SQ+YPGQ MMP VYH    P YQF H+S TMG+P HI+  
Sbjct: 167 KVSYNGGG------YVNGHFSQVYPGQAMMP-VYH----PYYQFHHQSQTMGLPAHIYSP 215

Query: 615 ----------PSPPSMAPNTSCLAVE 568
                       P S+ P   CLAVE
Sbjct: 216 TPAAPIPTLMSKPTSIPPTAVCLAVE 241


>ref|XP_004169901.1| PREDICTED: uncharacterized protein LOC101231499 [Cucumis sativus]
          Length = 266

 Score = 67.4 bits (163), Expect = 6e-09
 Identities = 29/50 (58%), Positives = 35/50 (70%)
 Frame = -1

Query: 744 YMNGHYSQMYPGQGMMPAVYHHHHQPLYQFHRSHTMGVPTHIFPSPPSMA 595
           YMNGHY+QMYPGQ M+ A       PLY +H+SH MG+P HIFP  P+ A
Sbjct: 188 YMNGHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTA 237


>ref|XP_004143608.1| PREDICTED: uncharacterized protein LOC101202850 [Cucumis sativus]
          Length = 266

 Score = 67.4 bits (163), Expect = 6e-09
 Identities = 29/50 (58%), Positives = 35/50 (70%)
 Frame = -1

Query: 744 YMNGHYSQMYPGQGMMPAVYHHHHQPLYQFHRSHTMGVPTHIFPSPPSMA 595
           YMNGHY+QMYPGQ M+ A       PLY +H+SH MG+P HIFP  P+ A
Sbjct: 188 YMNGHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTA 237


>ref|XP_004237521.1| PREDICTED: uncharacterized protein LOC101251083 isoform 1 [Solanum
           lycopersicum]
          Length = 250

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 37/66 (56%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
 Frame = -1

Query: 786 KLSYGSGGPXXXXAYMNGHYSQMYPGQGMMPAVYHHHHQPLYQF-HRSHTMGVPTHIFPS 610
           K+SY  GG      Y+NGH+SQ+YPGQ MMP VYH    P YQF H+S TMG+P HI+ S
Sbjct: 167 KVSYNGGG------YVNGHFSQVYPGQAMMP-VYH----PYYQFHHQSQTMGLPAHIY-S 214

Query: 609 PPSMAP 592
           P   AP
Sbjct: 215 PTPAAP 220


>ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265113 [Vitis vinifera]
          Length = 254

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 37/85 (43%), Positives = 43/85 (50%), Gaps = 15/85 (17%)
 Frame = -1

Query: 786 KLSYGSGGPXXXXAYMNGHYSQMYPGQGMMPAVYHHHHQPLYQFHRSHTMGVPTHIFP-- 613
           KLSY  G       YMNGH+SQ+YPGQ M+ A       P Y FH+S TMG P H+FP  
Sbjct: 166 KLSYTGGS------YMNGHFSQVYPGQAMVGANALMPMYPFYHFHQSQTMGHPAHMFPPT 219

Query: 612 -------------SPPSMAPNTSCL 577
                         P SMAPNT  +
Sbjct: 220 TVGPMPTVPAIISKPTSMAPNTGAM 244


>ref|XP_006485938.1| PREDICTED: RNA-binding protein 38-like isoform X1 [Citrus sinensis]
          Length = 254

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 42/96 (43%), Positives = 50/96 (52%), Gaps = 23/96 (23%)
 Frame = -1

Query: 786 KLSYGSGGPXXXXAYMNGHYSQMYPGQGMMPA------VYHHHHQPLYQFHRSHTMGVPT 625
           KLSY  G       Y+NGH+ QMYPGQ ++ A      +Y     PLY FH+S TMG+P 
Sbjct: 170 KLSYTGGS------YVNGHFPQMYPGQPIVGATNTLMPIY-----PLYHFHQSQTMGLPA 218

Query: 624 HIFP---------------SPPSMAPNTS--CLAVE 568
           HIFP                P S+APNT   CLAVE
Sbjct: 219 HIFPPTTAGHMTTVPAIISKPASIAPNTETVCLAVE 254


>ref|XP_002312040.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222851860|gb|EEE89407.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 251

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 41/90 (45%), Positives = 48/90 (53%), Gaps = 17/90 (18%)
 Frame = -1

Query: 786 KLSYGSGGPXXXXAYMNGHYSQMYPGQGMMPAVYHHHHQPLYQFHRSHTMGVP-THIFP- 613
           KLSY  G       YMNGH+SQ+YPGQ M+ A       PLY FH+S  +G+P  HIFP 
Sbjct: 168 KLSYTGGS------YMNGHFSQVYPGQAMVGANTLMPMYPLYHFHQSQAVGLPAAHIFPP 221

Query: 612 --------------SPPSMA-PNTSCLAVE 568
                          PPS+A PN  CLAVE
Sbjct: 222 NTAGPMTTVPTIMSKPPSIAPPNAVCLAVE 251


>ref|XP_006340455.1| PREDICTED: RNA-binding protein 38-like isoform X2 [Solanum
           tuberosum]
          Length = 253

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 37/89 (41%), Positives = 45/89 (50%), Gaps = 16/89 (17%)
 Frame = -1

Query: 786 KLSYGSGGPXXXXAYMNGHYSQMYPGQGMMPAV-YHHHHQPLYQFHRSHTMGVPTHIF-- 616
           K+SY  GG      YMNGH+SQ+YP Q MMP   Y+H H      H+S TMG+P HI+  
Sbjct: 177 KVSYNGGG------YMNGHFSQVYPSQAMMPMYPYYHFH------HQSQTMGLPAHIYSP 224

Query: 615 -------------PSPPSMAPNTSCLAVE 568
                          P S+ P   CLAVE
Sbjct: 225 TPAGPIPALPALMSKPTSIPPTAVCLAVE 253


>ref|XP_007009716.1| RNA-binding family protein isoform 2 [Theobroma cacao]
           gi|508726629|gb|EOY18526.1| RNA-binding family protein
           isoform 2 [Theobroma cacao]
          Length = 249

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 38/91 (41%), Positives = 48/91 (52%), Gaps = 18/91 (19%)
 Frame = -1

Query: 786 KLSYGSGGPXXXXAYMNGHYSQMYPGQGMMPAVYHHHHQPLYQFHRSHTMGVPTHIFP-- 613
           KLSY  G       YMNG +SQ+YPGQ ++ A       P Y +H+S TMG+P H+FP  
Sbjct: 165 KLSYTGG------TYMNGPFSQVYPGQALVGANTLMPMYPFYHYHQSQTMGLPAHVFPPT 218

Query: 612 --------------SPP--SMAPNTSCLAVE 568
                         S P  +MAPN+ CLAVE
Sbjct: 219 TAGPITTVPAAAIMSKPAAAMAPNSVCLAVE 249


>gb|EXC19488.1| RNA-binding protein 38 [Morus notabilis]
          Length = 277

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 15/81 (18%)
 Frame = -1

Query: 786 KLSYGSGGPXXXXAYMNGHYSQMYPGQGMMPAVYHHHHQPLYQFHRSHTMGVPTHIFPS- 610
           KLSY  G       YM+GH+SQ+YPGQ +M A       P+Y +H+SHTMG+P H+FP+ 
Sbjct: 169 KLSYTGG------TYMSGHFSQVYPGQPIMGANTLMPMYPMYHYHQSHTMGLPAHMFPTT 222

Query: 609 --------------PPSMAPN 589
                         P S+APN
Sbjct: 223 TAGPISTGPAIISKPASIAPN 243


>ref|XP_002315274.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|118481097|gb|ABK92502.1| unknown
           [Populus trichocarpa] gi|222864314|gb|EEF01445.1| RNA
           recognition motif-containing family protein [Populus
           trichocarpa]
          Length = 253

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 39/90 (43%), Positives = 48/90 (53%), Gaps = 17/90 (18%)
 Frame = -1

Query: 786 KLSYGSGGPXXXXAYMNGHYSQMYPGQGMMPAVYHHHHQPLYQFHRSHTMGVP-THIFP- 613
           KL+Y  G       YMNGH+SQ+YPGQ M+ A       P Y FH+S  MG+P  HIFP 
Sbjct: 170 KLNYTGGS------YMNGHFSQVYPGQAMVGANTLMPMYPFYHFHQSQAMGLPAAHIFPP 223

Query: 612 --------------SPPSMAPNTS-CLAVE 568
                          PPS+AP ++ CLAVE
Sbjct: 224 TTAGPMTTVPTIMSKPPSIAPPSAVCLAVE 253


>ref|XP_006340454.1| PREDICTED: RNA-binding protein 38-like isoform X1 [Solanum
           tuberosum]
          Length = 262

 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
 Frame = -1

Query: 786 KLSYGSGGPXXXXAYMNGHYSQMYPGQGMMPAV-YHHHHQPLYQFHRSHTMGVPTHIF-P 613
           K+SY  GG      YMNGH+SQ+YP Q MMP   Y+H H      H+S TMG+P HI+ P
Sbjct: 177 KVSYNGGG------YMNGHFSQVYPSQAMMPMYPYYHFH------HQSQTMGLPAHIYSP 224

Query: 612 SPPSMAP 592
           +P    P
Sbjct: 225 TPAGPIP 231


>ref|XP_007220834.1| hypothetical protein PRUPE_ppa026384mg, partial [Prunus persica]
           gi|462417296|gb|EMJ22033.1| hypothetical protein
           PRUPE_ppa026384mg, partial [Prunus persica]
          Length = 253

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 39/91 (42%), Positives = 44/91 (48%), Gaps = 24/91 (26%)
 Frame = -1

Query: 786 KLSYGSGGPXXXXAYMNGHYS-QMYPGQGM--------MPAVYHHHHQPLYQFHRSHTMG 634
           KL Y  G       YMNGHYS Q+YPGQ M        M  +YH+HHQ       SHTMG
Sbjct: 176 KLGYTGGA------YMNGHYSPQVYPGQPMVGPNTLMPMYPLYHYHHQ-------SHTMG 222

Query: 633 VPTHIFP---------------SPPSMAPNT 586
           +P HIFP                P S+APNT
Sbjct: 223 LPAHIFPPTTSGHVAAVPTIMSKPASIAPNT 253


>ref|XP_007009717.1| RNA-binding family protein isoform 3 [Theobroma cacao]
           gi|508726630|gb|EOY18527.1| RNA-binding family protein
           isoform 3 [Theobroma cacao]
          Length = 254

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 30/68 (44%), Positives = 40/68 (58%)
 Frame = -1

Query: 786 KLSYGSGGPXXXXAYMNGHYSQMYPGQGMMPAVYHHHHQPLYQFHRSHTMGVPTHIFPSP 607
           KLSY  G       YMNG +SQ+YPGQ ++ A       P Y +H+S TMG+P H+FP P
Sbjct: 165 KLSYTGG------TYMNGPFSQVYPGQALVGANTLMPMYPFYHYHQSQTMGLPAHVFP-P 217

Query: 606 PSMAPNTS 583
            +  P T+
Sbjct: 218 TTAGPITT 225


>ref|XP_007009715.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508726628|gb|EOY18525.1| RNA-binding family protein
           isoform 1 [Theobroma cacao]
          Length = 256

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 30/68 (44%), Positives = 40/68 (58%)
 Frame = -1

Query: 786 KLSYGSGGPXXXXAYMNGHYSQMYPGQGMMPAVYHHHHQPLYQFHRSHTMGVPTHIFPSP 607
           KLSY  G       YMNG +SQ+YPGQ ++ A       P Y +H+S TMG+P H+FP P
Sbjct: 165 KLSYTGG------TYMNGPFSQVYPGQALVGANTLMPMYPFYHYHQSQTMGLPAHVFP-P 217

Query: 606 PSMAPNTS 583
            +  P T+
Sbjct: 218 TTAGPITT 225


Top