BLASTX nr result

ID: Akebia25_contig00005249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00005249
         (419 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63318.1| hypothetical protein VITISV_030353 [Vitis vinifera]    51   4e-10
ref|XP_002275792.1| PREDICTED: uncharacterized protein LOC100254...    47   4e-09
emb|CBI30464.3| unnamed protein product [Vitis vinifera]               47   4e-09
ref|XP_006381226.1| hypothetical protein POPTR_0006s09410g [Popu...    43   3e-08
ref|XP_002308190.2| hypothetical protein POPTR_0006s09410g [Popu...    43   3e-08
gb|ABK94774.1| unknown [Populus trichocarpa]                           43   3e-08

>emb|CAN63318.1| hypothetical protein VITISV_030353 [Vitis vinifera]
          Length = 344

 Score = 50.8 bits (120), Expect(2) = 4e-10
 Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
 Frame = +1

Query: 187 KMNDEGPKYNYGRGLLGPPRNPSPVSVPMKPSN--GGFYAN 303
           +MNDE   Y   RGLL PPR PSP+S+P+K +N   GFY+N
Sbjct: 165 RMNDEEYGYQQSRGLLAPPRKPSPISIPVKNANTDAGFYSN 205



 Score = 38.9 bits (89), Expect(2) = 4e-10
 Identities = 17/28 (60%), Positives = 17/28 (60%)
 Frame = +2

Query: 20  FPAENPKAWVKVGSPQSTLCEVGSWSGC 103
           F  EN K W   GSPQSTLC VG   GC
Sbjct: 102 FVYENKKTWGMAGSPQSTLCAVGGGCGC 129


>ref|XP_002275792.1| PREDICTED: uncharacterized protein LOC100254537 [Vitis vinifera]
          Length = 409

 Score = 47.4 bits (111), Expect(2) = 4e-09
 Identities = 23/41 (56%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
 Frame = +1

Query: 187 KMNDEGPKYNYGRGLLGPPRNPSPVSVPMKPSN--GGFYAN 303
           +MNDE   Y   RGLL PPR PS +SVP+K +N   GFY+N
Sbjct: 165 RMNDEEYGYQQSRGLLAPPRKPSLISVPVKNANTDAGFYSN 205



 Score = 38.9 bits (89), Expect(2) = 4e-09
 Identities = 17/28 (60%), Positives = 17/28 (60%)
 Frame = +2

Query: 20  FPAENPKAWVKVGSPQSTLCEVGSWSGC 103
           F  EN K W   GSPQSTLC VG   GC
Sbjct: 102 FVYENKKTWGMAGSPQSTLCAVGGGCGC 129


>emb|CBI30464.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score = 47.4 bits (111), Expect(2) = 4e-09
 Identities = 23/41 (56%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
 Frame = +1

Query: 187 KMNDEGPKYNYGRGLLGPPRNPSPVSVPMKPSN--GGFYAN 303
           +MNDE   Y   RGLL PPR PS +SVP+K +N   GFY+N
Sbjct: 142 RMNDEEYGYQQSRGLLAPPRKPSLISVPVKNANTDAGFYSN 182



 Score = 38.9 bits (89), Expect(2) = 4e-09
 Identities = 17/28 (60%), Positives = 17/28 (60%)
 Frame = +2

Query: 20  FPAENPKAWVKVGSPQSTLCEVGSWSGC 103
           F  EN K W   GSPQSTLC VG   GC
Sbjct: 79  FVYENKKTWGMAGSPQSTLCAVGGGCGC 106


>ref|XP_006381226.1| hypothetical protein POPTR_0006s09410g [Populus trichocarpa]
           gi|550335857|gb|ERP59023.1| hypothetical protein
           POPTR_0006s09410g [Populus trichocarpa]
          Length = 406

 Score = 43.1 bits (100), Expect(2) = 3e-08
 Identities = 20/32 (62%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = +1

Query: 193 NDEGPKYN-YGRGLLGPPRNPSPVSVPMKPSN 285
           N+EG  +N   RGLLGPPR PSPVS+P+K  N
Sbjct: 176 NEEGCGFNNQSRGLLGPPRKPSPVSIPLKNPN 207



 Score = 40.4 bits (93), Expect(2) = 3e-08
 Identities = 18/28 (64%), Positives = 18/28 (64%)
 Frame = +2

Query: 20  FPAENPKAWVKVGSPQSTLCEVGSWSGC 103
           F  E  K WV  GSPQSTLC VGS  GC
Sbjct: 114 FGTEKSKGWVVSGSPQSTLCAVGSGCGC 141


>ref|XP_002308190.2| hypothetical protein POPTR_0006s09410g [Populus trichocarpa]
           gi|550335858|gb|EEE91713.2| hypothetical protein
           POPTR_0006s09410g [Populus trichocarpa]
          Length = 405

 Score = 43.1 bits (100), Expect(2) = 3e-08
 Identities = 20/32 (62%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = +1

Query: 193 NDEGPKYN-YGRGLLGPPRNPSPVSVPMKPSN 285
           N+EG  +N   RGLLGPPR PSPVS+P+K  N
Sbjct: 152 NEEGCGFNNQSRGLLGPPRKPSPVSIPLKNPN 183



 Score = 40.4 bits (93), Expect(2) = 3e-08
 Identities = 18/28 (64%), Positives = 18/28 (64%)
 Frame = +2

Query: 20  FPAENPKAWVKVGSPQSTLCEVGSWSGC 103
           F  E  K WV  GSPQSTLC VGS  GC
Sbjct: 90  FGTEKSKGWVVSGSPQSTLCAVGSGCGC 117


>gb|ABK94774.1| unknown [Populus trichocarpa]
          Length = 405

 Score = 43.1 bits (100), Expect(2) = 3e-08
 Identities = 20/32 (62%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = +1

Query: 193 NDEGPKYN-YGRGLLGPPRNPSPVSVPMKPSN 285
           N+EG  +N   RGLLGPPR PSPVS+P+K  N
Sbjct: 152 NEEGCGFNNQSRGLLGPPRKPSPVSIPLKNPN 183



 Score = 40.4 bits (93), Expect(2) = 3e-08
 Identities = 18/28 (64%), Positives = 18/28 (64%)
 Frame = +2

Query: 20  FPAENPKAWVKVGSPQSTLCEVGSWSGC 103
           F  E  K WV  GSPQSTLC VGS  GC
Sbjct: 90  FGTEKSKGWVVSGSPQSTLCAVGSGCGC 117


Top