BLASTX nr result

ID: Akebia25_contig00005215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00005215
         (669 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352592.1| PREDICTED: F-box protein SKIP27-like isoform...    61   3e-07
ref|XP_004248377.1| PREDICTED: F-box protein SKIP27-like isoform...    61   3e-07
gb|ADO00336.1| F-box protein [Elaeis guineensis]                       58   2e-06
ref|XP_007212141.1| hypothetical protein PRUPE_ppa012223mg [Prun...    57   7e-06

>ref|XP_006352592.1| PREDICTED: F-box protein SKIP27-like isoform X1 [Solanum tuberosum]
           gi|565372011|ref|XP_006352593.1| PREDICTED: F-box
           protein SKIP27-like isoform X2 [Solanum tuberosum]
           gi|565372013|ref|XP_006352594.1| PREDICTED: F-box
           protein SKIP27-like isoform X3 [Solanum tuberosum]
          Length = 177

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 33/78 (42%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
 Frame = -1

Query: 669 TLIAKNWHFAFCTPSSKTSCLRPFSDLDDESK---LDIKDAPKQQRRNRSQQMSGKRLAD 499
           TL+AK WHF + TP+ KT   +  +D+D+ S+   +++ +AP+Q +  R++ +S K+LAD
Sbjct: 93  TLVAKRWHFEYSTPT-KTLGFKNATDIDNWSESNNVEVPNAPRQSKFPRAR-LSRKKLAD 150

Query: 498 ITIALFHSPEGEQWSRRE 445
           I++ALF S   E W RRE
Sbjct: 151 ISVALFTSDSEENWPRRE 168


>ref|XP_004248377.1| PREDICTED: F-box protein SKIP27-like isoform 1 [Solanum
           lycopersicum] gi|460405832|ref|XP_004248378.1|
           PREDICTED: F-box protein SKIP27-like isoform 2 [Solanum
           lycopersicum]
          Length = 177

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
 Frame = -1

Query: 669 TLIAKNWHFAFCTPSSKTSCLRPFSDLDD---ESKLDIKDAPKQQRRNRSQQMSGKRLAD 499
           TL+AK WHF + TP  KT   +  +D+DD    + +++ +AP+Q +  R++ +S K+LAD
Sbjct: 93  TLVAKRWHFEYSTPK-KTLGFKNATDMDDWNESNDVELPNAPRQAKFPRTR-LSQKKLAD 150

Query: 498 ITIALFHSPEGEQWSRRE 445
           I++ALF S   E W RRE
Sbjct: 151 ISVALFTSDSEENWPRRE 168


>gb|ADO00336.1| F-box protein [Elaeis guineensis]
          Length = 178

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = -1

Query: 669 TLIAKNWHFAFCTPSSKTSCLRP--FSDLDDESKLDIKDAPKQQRRNRSQQMSGKRLADI 496
           TLIAK  HFAF TPSSK +  R     D+D E   +  +APKQ+R  +S ++ GK L+ I
Sbjct: 99  TLIAKEMHFAFSTPSSKPTFRREGNMGDIDLEVSEEAPNAPKQRRVAKS-RLGGKTLSSI 157

Query: 495 TIALFHSPEGEQWSR 451
            +ALF SPE ++W +
Sbjct: 158 AVALFTSPE-DKWPK 171


>ref|XP_007212141.1| hypothetical protein PRUPE_ppa012223mg [Prunus persica]
           gi|462408006|gb|EMJ13340.1| hypothetical protein
           PRUPE_ppa012223mg [Prunus persica]
          Length = 179

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
 Frame = -1

Query: 669 TLIAKNWHFAFCTPSSKTSCLRPFSDL--DDESKLDIKDAPKQQRRNRSQQMSGKRLADI 496
           TLIAK WHFA+ TP SKT   R   D   DD  +++  +APKQ R    Q  S K+LA+I
Sbjct: 110 TLIAKQWHFAYSTP-SKTPAFRTAIDFSSDDMDEIEAPNAPKQWREQHRQLPSRKKLAEI 168

Query: 495 TIALFHSPEGE 463
           ++ LF S + E
Sbjct: 169 SVNLFASWDEE 179


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