BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00004582
         (1802 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]   112   4e-70
gb|EYU33085.1| hypothetical protein MIMGU_mgv1a022287mg, partial...   260   2e-66
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha...   115   4e-66
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal...    99   5e-64
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha...    99   5e-64
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]                     99   7e-64
dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]     88   1e-59
gb|AAC02669.1| polyprotein [Arabidopsis thaliana]                     100   3e-59
gb|AAC02672.1| polyprotein [Arabidopsis arenosa]                      105   3e-59
gb|AAC02666.1| polyprotein [Arabidopsis thaliana]                     100   4e-59
gb|AAC02664.1| polyprotein [Arabidopsis thaliana]                     100   1e-58
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar...   103   9e-58
ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266...    98   2e-57
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]     115   2e-55
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   110   1e-54
emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]   107   2e-54
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]                     94   2e-54
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia...   108   4e-50
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ...   111   4e-49
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...    92   2e-48

>emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]
          Length = 590

 Score =  112 bits (279), Expect(4) = 4e-70
 Identities = 66/213 (30%), Positives = 111/213 (52%), Gaps = 1/213 (0%)
 Frame = -1

Query: 1610 ITVKLTNENYLLWKAQIMPYLKGHNLYGYVDGTMV-PPQMFNKMSQLTPAFLAWQQQDQA 1434
            IT +LT  N+  W AQ    L G+NL+GYVDGT   PP   +  +  T A   W +QD+ 
Sbjct: 19   ITARLTPTNFPSWNAQFESLLLGYNLFGYVDGTHTCPPLPTSTDAAATTAHHLWFRQDKL 78

Query: 1433 VMXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKKGSDSIA 1254
            ++           I  +  + TSH+ W  L +L+A+ S+ R++Q+   LT +++G+ SI 
Sbjct: 79   ILSAILTSVSPAVIPLIATSKTSHQAWTKLTKLYASRSRTRVMQLKEDLTLMQRGNRSIT 138

Query: 1253 EYYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPLTPSQVYSHL 1074
            EY    K + D LA+    LS  +   ++L GLG D+  +V  I  R   L+  +++  L
Sbjct: 139  EYLHSVKTIADELALIDAPLSQDDITLYVLHGLGSDFRDIVAPIRARESSLSFEELHDLL 198

Query: 1073 LTHESRLTHQNTGRTAATEFSANATHKQSNNNT 975
            L HE+ L   ++    +   +AN T ++ + ++
Sbjct: 199  LGHEAYLRRLDS-TAQSLVVTANTTQRRDSRSS 230



 Score =  108 bits (269), Expect(4) = 4e-70
 Identities = 56/123 (45%), Positives = 80/123 (65%), Gaps = 3/123 (2%)
 Frame = -1

Query: 614 VRIGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHSS 435
           V IGDG+ LPI H GS +++  +  F +     VP+I+KNL+SV  F + N    EFH +
Sbjct: 326 VIIGDGSGLPITHSGSLTLSFPNRKFQVEDTLCVPTINKNLISVHHFTKQNNVILEFHPT 385

Query: 434 FFCVKDSQTQKILLQGPTKDGMNVFPSS---SPQAHVHERVTPSQWHLRLKHPSMQLVHK 264
           +F VKD +T +ILLQGP ++G+   PSS   +P A VHER + + WH RL HPS ++V +
Sbjct: 386 YFLVKDRRTGEILLQGPCENGVYPMPSSPAATPIAFVHERTSVTGWHQRLGHPSFKVVTR 445

Query: 263 IIS 255
           +IS
Sbjct: 446 LIS 448



 Score = 75.5 bits (184), Expect(4) = 4e-70
 Identities = 36/85 (42%), Positives = 50/85 (58%)
 Frame = -3

Query: 261 NLPSALPITQSNSSGLCSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGPAPLLSRGGF 82
           +LP+   ++ SN+   C SC   K HQLP+ +    S  P  LL+ DVWGP+P  S  G 
Sbjct: 451 SLPTTSCLSGSNN---CHSCSINKAHQLPFHKHGLTSTTPFDLLYTDVWGPSPTPSLNGH 507

Query: 81  RFYFSLVDDYSRFTWIFPLKCKSDV 7
           R+Y   VD ++++ W FPL  KSDV
Sbjct: 508 RYYVIFVDHFTKYVWFFPLHQKSDV 532



 Score = 40.8 bits (94), Expect(4) = 4e-70
 Identities = 27/85 (31%), Positives = 37/85 (43%)
 Frame = -2

Query: 862 PTCQVCHKQGHTATTCYYRFDFNYQPPPPSSLSANFTSGAQYPLPSPTLADSNWYPDSAA 683
           P  Q C +QGH A  C            PS  + N T+    P       +  W  DSAA
Sbjct: 259 PRSQYCDQQGHIAKYC--------PKLKPSDATVNCTTTTSSP-------NKRWLIDSAA 303

Query: 682 THHFTHDFSNLTLNPSEYKGDEQCV 608
           +H+ T   SNL  + SEY G ++ +
Sbjct: 304 SHNITSQVSNLQFH-SEYDGTDEVI 327


>gb|EYU33085.1| hypothetical protein MIMGU_mgv1a022287mg, partial [Mimulus guttatus]
          Length = 256

 Score =  260 bits (664), Expect = 2e-66
 Identities = 122/207 (58%), Positives = 167/207 (80%)
 Frame = -1

Query: 1610 ITVKLTNENYLLWKAQIMPYLKGHNLYGYVDGTMVPPQMFNKMSQLTPAFLAWQQQDQAV 1431
            +++KL+++NY+LWKAQ++P+L+GHNLYG+VDG+   P++F++MSQ  PA+  W Q DQ+V
Sbjct: 36   LSLKLSDDNYMLWKAQLLPFLRGHNLYGFVDGSFSAPEVFDEMSQPNPAYSVWHQNDQSV 95

Query: 1430 MXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKKGSDSIAE 1251
            M           +AHVLEA+TS E+W +LE++F+A SQAR++Q+  QLTTLKKG++S+A 
Sbjct: 96   MSLLISSLSESVMAHVLEATTSREVWQILEDMFSANSQARVMQLFFQLTTLKKGAESVAI 155

Query: 1250 YYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPLTPSQVYSHLL 1071
            YYRRAKLL+DTLAMAGK++ SSEFI FLLAGLG D+DSVVTSITT+  PL+P+QVYSHLL
Sbjct: 156  YYRRAKLLVDTLAMAGKLVPSSEFIVFLLAGLGSDFDSVVTSITTQAVPLSPAQVYSHLL 215

Query: 1070 THESRLTHQNTGRTAATEFSANATHKQ 990
            THESR+ HQ    T++ + SAN + +Q
Sbjct: 216  THESRINHQLKDLTSSGDLSANFSSRQ 242


>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
            gi|225898008|dbj|BAH30336.1| hypothetical protein
            [Arabidopsis thaliana]
          Length = 1459

 Score =  115 bits (289), Expect(4) = 4e-66
 Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 3/211 (1%)
 Frame = -1

Query: 1601 KLTNENYLLWKAQIMPYLKGHNLYGYVDGTMV-PPQM--FNKMSQLTPAFLAWQQQDQAV 1431
            KLT+ NYL+W  QI   L G++L GY+D ++V PP+    N +    P+F  W++QD+ +
Sbjct: 32   KLTSTNYLMWSIQIHALLDGYDLAGYLDNSVVIPPETTTINSVVSANPSFTLWKRQDKLI 91

Query: 1430 MXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKKGSDSIAE 1251
                         + V  A+ S +IW  L   +A  S   I Q+  Q+  L KG+ +I E
Sbjct: 92   FSALIGAISPAVQSLVSRATNSSQIWSTLNNTYAKPSYGHIKQLRQQIQRLTKGTKTIDE 151

Query: 1250 YYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPLTPSQVYSHLL 1071
            Y +     LD LA+ GK +   E +  +L GL  +Y +VV  I  + +  T ++++  L+
Sbjct: 152  YVQSHTTRLDQLAILGKPMEHEEQVEHILKGLPEEYKTVVDQIEGKDNTPTITEIHERLI 211

Query: 1070 THESRLTHQNTGRTAATEFSANATHKQSNNN 978
             HES+L       +++   SANA  +++ NN
Sbjct: 212  NHESKLLSDEVPPSSSFPMSANAVQQRNFNN 242



 Score = 86.7 bits (213), Expect(4) = 4e-66
 Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 5/126 (3%)
 Frame = -1

Query: 614 VRIGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHSS 435
           V I DG  L I   GS+ + S + +  L K+ +VP I KNL+SV + C  N    EF  +
Sbjct: 366 VMIADGTGLTIKQTGSTFLPSQNRDLALHKVLYVPDIRKNLISVYRLCNTNQVSVEFFPA 425

Query: 434 FFCVKDSQTQKILLQGPTKDGMNVFPSSSPQAHV-----HERVTPSQWHLRLKHPSMQLV 270
            F VKD  T  +LLQG TKD +  +P ++P A         + T S WH RL HPS  ++
Sbjct: 426 SFQVKDLNTGTLLLQGRTKDDLYEWPVTNPPATALFTSPSPKTTLSSWHSRLGHPSASIL 485

Query: 269 HKIISQ 252
           + ++S+
Sbjct: 486 NTLLSK 491



 Score = 74.3 bits (181), Expect(4) = 4e-66
 Identities = 33/82 (40%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
 Frame = -3

Query: 249 ALPITQSNSSGL-CSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGPAPLLSRGGFRFY 73
           +LP++ ++S+   CS C   K H+LP+  S+  S +PL+ +F DVW  +P++S   +++Y
Sbjct: 493 SLPVSVASSNKTSCSDCLINKSHKLPFATSSIHSSSPLEYIFTDVW-TSPIISHDNYKYY 551

Query: 72  FSLVDDYSRFTWIFPLKCKSDV 7
             LVD Y+R+TW++PL+ KS V
Sbjct: 552 LVLVDHYTRYTWLYPLQQKSQV 573



 Score = 45.8 bits (107), Expect(4) = 4e-66
 Identities = 34/90 (37%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
 Frame = -2

Query: 877 FAPI*PTCQVCHKQGHTATTCYYRFDFNYQPPPPSSLSANFTSG---AQYPLPSPTLADS 707
           F P    CQ+C  QGH+A  C        Q P  SS  + FT     A   + SP  A+ 
Sbjct: 279 FKPYLGKCQICSVQGHSARRCPQLQAM--QLPASSSAHSPFTPWQPRANLAIGSPYAANP 336

Query: 706 NWYPDSAATHHFTHDFSNLTLNPSEYKGDE 617
            W  DS ATHH T D + L+L+   Y G E
Sbjct: 337 -WLLDSGATHHITSDLNALSLH-QPYNGGE 364


>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
            gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1466

 Score = 99.0 bits (245), Expect(4) = 5e-64
 Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 7/215 (3%)
 Frame = -1

Query: 1601 KLTNENYLLWKAQIMPYLKGHNLYGYVDG-TMVPPQMF--NKMSQLTPAFLAWQQQDQAV 1431
            KLT+ NYL+W  Q+     G+ L G++DG T +PP     +   ++ P +  W++QD+ +
Sbjct: 25   KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLI 84

Query: 1430 MXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKKGSDSIAE 1251
                           V  A+T+ +IW  L +++A  S   + Q+  QL    KG+ +I +
Sbjct: 85   YSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDD 144

Query: 1250 YYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPLTPSQVYSHLL 1071
            Y +      D LA+ GK +   E +  +L  L  +Y  V+  I  +  P T ++++  LL
Sbjct: 145  YMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLL 204

Query: 1070 THESRLTHQNTGR----TAATEFSANATHKQSNNN 978
             HES++   ++      TA      N T   +NNN
Sbjct: 205  NHESKILAVSSATVIPITANAVSHRNTTTTNNNNN 239



 Score = 88.2 bits (217), Expect(4) = 5e-64
 Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
 Frame = -1

Query: 614 VRIGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHSS 435
           V + DG+ +PI H GS+S+++      L  + +VP+I KNL+SV + C  N    EF  +
Sbjct: 360 VMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPA 419

Query: 434 FFCVKDSQTQKILLQGPTKDGMNVFPSSSPQ-----AHVHERVTPSQWHLRLKHPSMQLV 270
            F VKD  T   LLQG TKD +  +P +S Q     A    + T S WH RL HP+  ++
Sbjct: 420 SFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSIL 479

Query: 269 HKIIS 255
           + +IS
Sbjct: 480 NSVIS 484



 Score = 68.2 bits (165), Expect(4) = 5e-64
 Identities = 29/69 (42%), Positives = 46/69 (66%)
 Frame = -3

Query: 213 CSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGPAPLLSRGGFRFYFSLVDDYSRFTWI 34
           CS C   K +++P+ +ST  S  PL+ ++ DVW  +P+LS   +R+Y   VD ++R+TW+
Sbjct: 500 CSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWL 558

Query: 33  FPLKCKSDV 7
           +PLK KS V
Sbjct: 559 YPLKQKSQV 567



 Score = 60.5 bits (145), Expect(4) = 5e-64
 Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
 Frame = -2

Query: 901 SFNPHTPFFAPI*PTCQVCHKQGHTATTC----YYRFDFNYQPPP----PSSLSANFTSG 746
           +F+P+     P    CQ+C  QGH+A  C    ++    N Q PP    P    AN   G
Sbjct: 264 NFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALG 323

Query: 745 AQYPLPSPTLADSNWYPDSAATHHFTHDFSNLTLNPSEYKGDEQCV 608
           + Y       + +NW  DS ATHH T DF+NL+L+     GD+  V
Sbjct: 324 SPY-------SSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMV 362


>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
            gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1466

 Score = 99.0 bits (245), Expect(4) = 5e-64
 Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 7/215 (3%)
 Frame = -1

Query: 1601 KLTNENYLLWKAQIMPYLKGHNLYGYVDG-TMVPPQMF--NKMSQLTPAFLAWQQQDQAV 1431
            KLT+ NYL+W  Q+     G+ L G++DG T +PP     +   ++ P +  W++QD+ +
Sbjct: 25   KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLI 84

Query: 1430 MXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKKGSDSIAE 1251
                           V  A+T+ +IW  L +++A  S   + Q+  QL    KG+ +I +
Sbjct: 85   YSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDD 144

Query: 1250 YYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPLTPSQVYSHLL 1071
            Y +      D LA+ GK +   E +  +L  L  +Y  V+  I  +  P T ++++  LL
Sbjct: 145  YMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLL 204

Query: 1070 THESRLTHQNTGR----TAATEFSANATHKQSNNN 978
             HES++   ++      TA      N T   +NNN
Sbjct: 205  NHESKILAVSSATVIPITANAVSHRNTTTTNNNNN 239



 Score = 88.2 bits (217), Expect(4) = 5e-64
 Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
 Frame = -1

Query: 614 VRIGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHSS 435
           V + DG+ +PI H GS+S+++      L  + +VP+I KNL+SV + C  N    EF  +
Sbjct: 360 VMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPA 419

Query: 434 FFCVKDSQTQKILLQGPTKDGMNVFPSSSPQ-----AHVHERVTPSQWHLRLKHPSMQLV 270
            F VKD  T   LLQG TKD +  +P +S Q     A    + T S WH RL HP+  ++
Sbjct: 420 SFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSIL 479

Query: 269 HKIIS 255
           + +IS
Sbjct: 480 NSVIS 484



 Score = 68.2 bits (165), Expect(4) = 5e-64
 Identities = 29/69 (42%), Positives = 46/69 (66%)
 Frame = -3

Query: 213 CSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGPAPLLSRGGFRFYFSLVDDYSRFTWI 34
           CS C   K +++P+ +ST  S  PL+ ++ DVW  +P+LS   +R+Y   VD ++R+TW+
Sbjct: 500 CSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWL 558

Query: 33  FPLKCKSDV 7
           +PLK KS V
Sbjct: 559 YPLKQKSQV 567



 Score = 60.5 bits (145), Expect(4) = 5e-64
 Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
 Frame = -2

Query: 901 SFNPHTPFFAPI*PTCQVCHKQGHTATTC----YYRFDFNYQPPP----PSSLSANFTSG 746
           +F+P+     P    CQ+C  QGH+A  C    ++    N Q PP    P    AN   G
Sbjct: 264 NFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALG 323

Query: 745 AQYPLPSPTLADSNWYPDSAATHHFTHDFSNLTLNPSEYKGDEQCV 608
           + Y       + +NW  DS ATHH T DF+NL+L+     GD+  V
Sbjct: 324 SPY-------SSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMV 362


>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score = 98.6 bits (244), Expect(4) = 7e-64
 Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 7/215 (3%)
 Frame = -1

Query: 1601 KLTNENYLLWKAQIMPYLKGHNLYGYVDG-TMVPPQMF--NKMSQLTPAFLAWQQQDQAV 1431
            KLT+ NYL+W  Q+     G+ L G++DG T +PP     +   ++ P +  W++QD+ +
Sbjct: 25   KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLI 84

Query: 1430 MXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKKGSDSIAE 1251
                           V  A+T+ +IW  L +++A  S   + Q+  QL    KG+ +I +
Sbjct: 85   YSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDD 144

Query: 1250 YYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPLTPSQVYSHLL 1071
            Y +      D LA+ GK +   E +  +L  L  +Y  V+  I  +  P T ++++  LL
Sbjct: 145  YMQGFVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLL 204

Query: 1070 THESRLTHQNTGR----TAATEFSANATHKQSNNN 978
             HES++   ++      TA      N T   +NNN
Sbjct: 205  NHESKILAVSSATVIPITANAVSHRNTTTTNNNNN 239



 Score = 88.2 bits (217), Expect(4) = 7e-64
 Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
 Frame = -1

Query: 614 VRIGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHSS 435
           V + DG+ +PI H GS+S+++      L  + +VP+I KNL+SV + C  N    EF  +
Sbjct: 360 VMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPA 419

Query: 434 FFCVKDSQTQKILLQGPTKDGMNVFPSSSPQ-----AHVHERVTPSQWHLRLKHPSMQLV 270
            F VKD  T   LLQG TKD +  +P +S Q     A    + T S WH RL HP+  ++
Sbjct: 420 SFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSIL 479

Query: 269 HKIIS 255
           + +IS
Sbjct: 480 NSVIS 484



 Score = 68.2 bits (165), Expect(4) = 7e-64
 Identities = 29/69 (42%), Positives = 46/69 (66%)
 Frame = -3

Query: 213 CSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGPAPLLSRGGFRFYFSLVDDYSRFTWI 34
           CS C   K +++P+ +ST  S  PL+ ++ DVW  +P+LS   +R+Y   VD ++R+TW+
Sbjct: 500 CSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWL 558

Query: 33  FPLKCKSDV 7
           +PLK KS V
Sbjct: 559 YPLKQKSQV 567



 Score = 60.5 bits (145), Expect(4) = 7e-64
 Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
 Frame = -2

Query: 901 SFNPHTPFFAPI*PTCQVCHKQGHTATTC----YYRFDFNYQPPP----PSSLSANFTSG 746
           +F+P+     P    CQ+C  QGH+A  C    ++    N Q PP    P    AN   G
Sbjct: 264 NFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALG 323

Query: 745 AQYPLPSPTLADSNWYPDSAATHHFTHDFSNLTLNPSEYKGDEQCV 608
           + Y       + +NW  DS ATHH T DF+NL+L+     GD+  V
Sbjct: 324 SPY-------SSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMV 362


>dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
          Length = 1048

 Score = 88.2 bits (217), Expect(4) = 1e-59
 Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
 Frame = -1

Query: 614 VRIGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHSS 435
           V + DG+ +PI H GS+S+++      L  + +VP+I KNL+SV + C  N    EF  +
Sbjct: 355 VMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPA 414

Query: 434 FFCVKDSQTQKILLQGPTKDGMNVFPSSSPQ-----AHVHERVTPSQWHLRLKHPSMQLV 270
            F VKD  T   LLQG TKD +  +P +S Q     A    + T S WH RL HP+  ++
Sbjct: 415 SFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSIL 474

Query: 269 HKIIS 255
           + +IS
Sbjct: 475 NSVIS 479



 Score = 86.3 bits (212), Expect(4) = 1e-59
 Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 7/215 (3%)
 Frame = -1

Query: 1601 KLTNENYLLWKAQIMPYLKGHNLYGYVDG-TMVPPQMF--NKMSQLTPAFLAWQQQDQAV 1431
            KLT+ NYL+W  Q+     G+ L G++DG T +PP     +   ++ P +  W++QD+ +
Sbjct: 25   KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLI 84

Query: 1430 MXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKKGSDSIAE 1251
                           V  A+T+ +IW  L +++A  S   + Q+  QL    KG+ +I +
Sbjct: 85   YNAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDD 144

Query: 1250 YYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPLTPSQVYSHLL 1071
            Y +      D LA+ GK +   E +  +L  L  +Y  V         P T ++++  LL
Sbjct: 145  YMQGFVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPV-----KACTPPTLTEIHERLL 199

Query: 1070 THESRLTHQNTGR----TAATEFSANATHKQSNNN 978
              ES++   ++      TA      N T   +NNN
Sbjct: 200  NQESKILAVSSATVIPITANAVSHRNTTTTNNNNN 234



 Score = 68.2 bits (165), Expect(4) = 1e-59
 Identities = 29/69 (42%), Positives = 46/69 (66%)
 Frame = -3

Query: 213 CSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGPAPLLSRGGFRFYFSLVDDYSRFTWI 34
           CS C   K +++P+ +ST  S  PL+ ++ DVW  +P+LS   +R+Y   VD ++R+TW+
Sbjct: 495 CSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWL 553

Query: 33  FPLKCKSDV 7
           +PLK KS V
Sbjct: 554 YPLKQKSQV 562



 Score = 58.2 bits (139), Expect(4) = 1e-59
 Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
 Frame = -2

Query: 901 SFNPHTPFFAPI*PTCQVCHKQGHTATTC--YYRFDFNYQPPPPSSLSANFTSGAQYPLP 728
           +F+P+     P    CQ+C  QGH+A  C     F  +     PSS    +   A   L 
Sbjct: 259 NFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPSSPFTPWQPRANLALG 318

Query: 727 SPTLADSNWYPDSAATHHFTHDFSNLTLNPSEYKGDEQCV 608
           SP  + +NW  DS ATHH T DF+NL+L+     GD+  V
Sbjct: 319 SP-YSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMV 357


>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  100 bits (250), Expect(4) = 3e-59
 Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
 Frame = -1

Query: 1601 KLTNENYLLWKAQIMPYLKGHNLYGYVDGTMVPPQMFNKMSQ----LTPAFLAWQQQDQA 1434
            +LT+ N+++W  Q+   L G++L GYVDG++  P      +         +  W++QD+ 
Sbjct: 31   RLTDSNFVMWSRQVHALLDGYDLAGYVDGSIPIPTPTRTTADGVVTTNNDYTLWKRQDKL 90

Query: 1433 VMXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKKGSDSIA 1254
            +               + +A+TS EIW  L   FA  S A + Q+  QL    KG+ SI 
Sbjct: 91   IYSALLGAISLSVQPLLSKANTSAEIWETLSSTFANPSWAHVQQLRQQLKQWTKGTKSIV 150

Query: 1253 EYYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPLTPSQVYSHL 1074
             Y++      D LA+ GK     E I  +L GL  DY +VV  I  R +P   ++V   L
Sbjct: 151  TYFQGFTTRFDHLALLGKAPEREEQIELILGGLPEDYKTVVDQIEGRENPPALTEVLEKL 210

Query: 1073 LTHESRLTHQNTGRTAATEFSANATHKQSNNN 978
            + HE +L  +      +   +ANA + + NNN
Sbjct: 211  INHEVKLAAK--AEATSVPVTANAVNYRGNNN 240



 Score = 80.9 bits (198), Expect(4) = 3e-59
 Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
 Frame = -1

Query: 614 VRIGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHSS 435
           V I DG+ LPI H GS+ + +   +  L  + +VP I KNL+SV + C  N    EF  +
Sbjct: 362 VTIADGSGLPISHSGSALLPTPTRSLALKDVLYVPDIQKNLISVYRMCNTNGVSVEFFPA 421

Query: 434 FFCVKDSQTQKILLQGPTKDGMNVFP-SSSPQAHVHERVTPS----QWHLRLKHPSMQLV 270
            F VKD  T   LLQG TK+ +  +P +SS    +    TP      WH RL HPS+ ++
Sbjct: 422 HFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPIL 481

Query: 269 HKIISQ 252
             +IS+
Sbjct: 482 KALISK 487



 Score = 70.5 bits (171), Expect(4) = 3e-59
 Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
 Frame = -3

Query: 249 ALPITQS-NSSGLCSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGPAPLLSRGGFRFY 73
           +LPI+ S  +  LCS C   K H+LP+  +T  S  PL+ L+ DVW  +P+ S   +++Y
Sbjct: 489 SLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDVW-TSPITSIDNYKYY 547

Query: 72  FSLVDDYSRFTWIFPLKCKSDV 7
             +VD Y+R+TW++PL+ KS V
Sbjct: 548 LVIVDHYTRYTWLYPLRKKSQV 569



 Score = 47.4 bits (111), Expect(4) = 3e-59
 Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
 Frame = -2

Query: 856 CQVCHKQGHTATTC--YYRFDFNYQPPPPSSLS-------ANFTSGAQYPLPSPTLADSN 704
           CQ+C   GH+A  C    +   +Y     SS S       AN  S   Y          N
Sbjct: 280 CQICSVHGHSARRCPQLQQHAGSYASNQSSSASYAPWQPRANMVSATPYN-------SGN 332

Query: 703 WYPDSAATHHFTHDFSNLTLNPSEYKGDEQ 614
           W  DS ATHH T D +NL L+   Y GDE+
Sbjct: 333 WLLDSGATHHLTSDLNNLALH-QPYNGDEE 361


>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
          Length = 1390

 Score =  105 bits (261), Expect(4) = 3e-59
 Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 4/212 (1%)
 Frame = -1

Query: 1601 KLTNENYLLWKAQIMPYLKGHNLYGYVDGTM-VPPQMFNKMSQLTPA---FLAWQQQDQA 1434
            +LT+ N+++W  Q+   L G++L GYVDG++ +PP        +      +  W++QD+ 
Sbjct: 31   RLTDSNFVMWSRQVHALLDGYDLAGYVDGSVPIPPPTRTTDDGVVTTNNDYTLWKRQDKL 90

Query: 1433 VMXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKKGSDSIA 1254
            V               + +A+TS E+W  L   FA  S A + Q+  QL    KG+ S+ 
Sbjct: 91   VYSALLGAISLSVQPLLSKANTSAEVWETLSSTFANPSWAHVQQLRQQLKQWTKGTKSVV 150

Query: 1253 EYYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPLTPSQVYSHL 1074
             Y++      D LA+ GK     E I  +L GL  DY +VV  I +R +P   ++V   L
Sbjct: 151  TYFQGFTTRFDHLALLGKAPEREEQIELILGGLPEDYKTVVDQIESRENPPALTEVLEKL 210

Query: 1073 LTHESRLTHQNTGRTAATEFSANATHKQSNNN 978
            + HE +L       T++   +ANA + + NNN
Sbjct: 211  INHEVKLA-AKAEATSSVPITANAVNYRGNNN 241



 Score = 79.7 bits (195), Expect(4) = 3e-59
 Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
 Frame = -1

Query: 614 VRIGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHSS 435
           V I DG+ LPI H GS+ + +   +  L  + +VP I KNL+SV + C  N    EF  +
Sbjct: 362 VTIADGSGLPISHSGSALLPTPTRSLDLKDVLYVPDIQKNLISVYRMCNTNGVSVEFFPA 421

Query: 434 FFCVKDSQTQKILLQGPTKDGMNVFP-SSSPQAHVHERVTPS----QWHLRLKHPSMQLV 270
            F VKD  T   LLQG TK+ +  +P +SS    +    TP      WH RL HPS+ ++
Sbjct: 422 HFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPIL 481

Query: 269 HKIISQ 252
             +IS+
Sbjct: 482 KTLISK 487



 Score = 70.5 bits (171), Expect(4) = 3e-59
 Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
 Frame = -3

Query: 249 ALPITQS-NSSGLCSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGPAPLLSRGGFRFY 73
           +LPI+ S  +  LCS C   K H+LP+  +T  S  PL+ L+ DVW  +P+ S   +++Y
Sbjct: 489 SLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDVW-TSPITSIDNYKYY 547

Query: 72  FSLVDDYSRFTWIFPLKCKSDV 7
             +VD Y+R+TW++PL+ KS V
Sbjct: 548 LVIVDHYTRYTWLYPLRQKSQV 569



 Score = 44.3 bits (103), Expect(4) = 3e-59
 Identities = 31/90 (34%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
 Frame = -2

Query: 856 CQVCHKQGHTATTC--YYRFDFNYQPPPPSSLS-------ANFTSGAQYPLPSPTLADSN 704
           CQ+C   GH+A  C    +   +Y     SS S       AN  S   Y          N
Sbjct: 280 CQICSVHGHSARRCPQLQQHAGSYASNQSSSSSYAPWQPRANMVSATPYN-------SGN 332

Query: 703 WYPDSAATHHFTHDFSNLTLNPSEYKGDEQ 614
           W  DS ATHH T D +NL L+   Y G E+
Sbjct: 333 WLLDSGATHHLTSDLNNLALH-QPYNGGEE 361


>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  100 bits (249), Expect(4) = 4e-59
 Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
 Frame = -1

Query: 1601 KLTNENYLLWKAQIMPYLKGHNLYGYVDGTMVPPQMFNKMSQ----LTPAFLAWQQQDQA 1434
            +LT+ N+++W  Q+   L G++L GY+DG++  P      +         +  W++QD+ 
Sbjct: 31   RLTDSNFVMWSRQVHALLDGYDLAGYIDGSIPIPTPTRTTADGVVTTNNDYTLWKRQDKL 90

Query: 1433 VMXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKKGSDSIA 1254
            +               + +A+TS EIW  L   FA  S A + Q+  QL    KG+ SI 
Sbjct: 91   IYSALLGAISLSVQPLLSKANTSAEIWETLSSTFANPSWAHVQQLRQQLKQWTKGTKSIV 150

Query: 1253 EYYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPLTPSQVYSHL 1074
             Y++      D LA+ GK     E I  +L GL  DY +VV  I  R +P   ++V   L
Sbjct: 151  TYFQGFTTRFDHLALLGKAPEREEQIELILGGLPEDYKTVVDQIEGRENPPALTEVLEKL 210

Query: 1073 LTHESRLTHQNTGRTAATEFSANATHKQSNNN 978
            + HE +L  +      +   +ANA + + NNN
Sbjct: 211  INHEVKLAAK--AEATSVPVTANAVNYRGNNN 240



 Score = 80.9 bits (198), Expect(4) = 4e-59
 Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
 Frame = -1

Query: 614 VRIGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHSS 435
           V I DG+ LPI H GS+ + +   +  L  + +VP I KNL+SV + C  N    EF  +
Sbjct: 362 VTIADGSGLPISHSGSALLPTPTRSLALKDVLYVPDIQKNLISVYRMCNTNGVSVEFFPA 421

Query: 434 FFCVKDSQTQKILLQGPTKDGMNVFP-SSSPQAHVHERVTPS----QWHLRLKHPSMQLV 270
            F VKD  T   LLQG TK+ +  +P +SS    +    TP      WH RL HPS+ ++
Sbjct: 422 HFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPIL 481

Query: 269 HKIISQ 252
             +IS+
Sbjct: 482 KALISK 487



 Score = 70.5 bits (171), Expect(4) = 4e-59
 Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
 Frame = -3

Query: 249 ALPITQS-NSSGLCSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGPAPLLSRGGFRFY 73
           +LPI+ S  +  LCS C   K H+LP+  +T  S  PL+ L+ DVW  +P+ S   +++Y
Sbjct: 489 SLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDVW-TSPITSIDNYKYY 547

Query: 72  FSLVDDYSRFTWIFPLKCKSDV 7
             +VD Y+R+TW++PL+ KS V
Sbjct: 548 LVIVDHYTRYTWLYPLRKKSQV 569



 Score = 47.4 bits (111), Expect(4) = 4e-59
 Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
 Frame = -2

Query: 856 CQVCHKQGHTATTC--YYRFDFNYQPPPPSSLS-------ANFTSGAQYPLPSPTLADSN 704
           CQ+C   GH+A  C    +   +Y     SS S       AN  S   Y          N
Sbjct: 280 CQICSVHGHSARRCPQLQQHAGSYASNQSSSASYAPWQPRANMVSATPYN-------SGN 332

Query: 703 WYPDSAATHHFTHDFSNLTLNPSEYKGDEQ 614
           W  DS ATHH T D +NL L+   Y GDE+
Sbjct: 333 WLLDSGATHHLTSDLNNLALH-QPYNGDEE 361


>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  100 bits (250), Expect(4) = 1e-58
 Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 4/212 (1%)
 Frame = -1

Query: 1601 KLTNENYLLWKAQIMPYLKGHNLYGYVDGTMVPPQMFNKMSQ----LTPAFLAWQQQDQA 1434
            +LT+ N+++W  Q+   L G++L GYVDG++  P      +         +  W++QD+ 
Sbjct: 31   RLTDSNFVMWSRQVHALLDGYDLAGYVDGSIPIPTPTRTTADGVVTTNNDYTLWKRQDKL 90

Query: 1433 VMXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKKGSDSIA 1254
            +               + +A+TS EIW  L   FA  S A + Q+  QL    KG+ SI 
Sbjct: 91   IYSALLGAISLSVQPLLSKANTSAEIWETLSSTFANPSWAHVQQLRQQLKQWTKGTKSIV 150

Query: 1253 EYYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPLTPSQVYSHL 1074
             Y++      D LA+ GK     E I  +L GL  DY +VV  I  R +P   ++V   L
Sbjct: 151  TYFQGFTTRFDHLALLGKAPEREEQIELILGGLPEDYKTVVDQIEGRENPPALTEVLEKL 210

Query: 1073 LTHESRLTHQNTGRTAATEFSANATHKQSNNN 978
            + HE +L  +      +   +ANA + + NNN
Sbjct: 211  INHEVKLAAK--AEATSVPVTANAVNYRGNNN 240



 Score = 80.9 bits (198), Expect(4) = 1e-58
 Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
 Frame = -1

Query: 614 VRIGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHSS 435
           V I DG+ LPI H GS+ + +   +  L  + +VP I KNL+SV + C  N    EF  +
Sbjct: 362 VTIADGSGLPISHSGSALLPTPTRSLALKDVLYVPDIQKNLISVYRMCNTNGVSVEFFPA 421

Query: 434 FFCVKDSQTQKILLQGPTKDGMNVFP-SSSPQAHVHERVTPS----QWHLRLKHPSMQLV 270
            F VKD  T   LLQG TK+ +  +P +SS    +    TP      WH RL HPS+ ++
Sbjct: 422 HFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPIL 481

Query: 269 HKIISQ 252
             +IS+
Sbjct: 482 KALISK 487



 Score = 70.5 bits (171), Expect(4) = 1e-58
 Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
 Frame = -3

Query: 249 ALPITQS-NSSGLCSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGPAPLLSRGGFRFY 73
           +LPI+ S  +  LCS C   K H+LP+  +T  S  PL+ L+ DVW  +P+ S   +++Y
Sbjct: 489 SLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDVW-TSPITSIDNYKYY 547

Query: 72  FSLVDDYSRFTWIFPLKCKSDV 7
             +VD Y+R+TW++PL+ KS V
Sbjct: 548 LVIVDHYTRYTWLYPLRKKSQV 569



 Score = 45.4 bits (106), Expect(4) = 1e-58
 Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
 Frame = -2

Query: 856 CQVCHKQGHTATTC--YYRFDFNYQPPPPSSLS-------ANFTSGAQYPLPSPTLADSN 704
           CQ+C   GH+A  C    +   +Y     SS S       AN  S   Y          N
Sbjct: 280 CQICSVHGHSARRCPQLQQHAGSYASNQSSSASYAPWQPRANMVSATPYN-------SGN 332

Query: 703 WYPDSAATHHFTHDFSNLTLNPSEYKGDEQ 614
           W  DS ATHH T + +NL L+   Y GDE+
Sbjct: 333 WLLDSGATHHLTSNLNNLALH-QPYNGDEE 361


>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
          Length = 1522

 Score =  103 bits (256), Expect(4) = 9e-58
 Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 14/225 (6%)
 Frame = -1

Query: 1610 ITVKLTNENYLLWKAQIMPYLKGHNLYGYVDGTMVPPQMFNKMS-------QLTPAFLAW 1452
            +TV L  +NY+LWK+Q   +L G  L G+V G++  P     ++       +  P F  W
Sbjct: 15   VTVTLNQQNYILWKSQFESFLSGQGLLGFVTGSISAPAQTRSVTHNNVTSEEPNPEFYTW 74

Query: 1451 QQQDQAVMXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKK 1272
             Q DQ V            ++ V+   TSH++W+ L   F   S +R+ ++  +L TL+K
Sbjct: 75   HQTDQVVKSWLLGSFAEDILSVVVNCFTSHQVWLTLANHFNRVSSSRLFELQRRLQTLEK 134

Query: 1271 GSDSIAEYYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVD---PL 1101
              +++  + +  K + D LA  G  +     I   L GLG +Y+ + T+I   VD    L
Sbjct: 135  KDNTMEVFLKDLKHICDQLASVGSPVPEKMKIFSALNGLGREYEPIKTTIENSVDSNPSL 194

Query: 1100 TPSQVYSHLLTHESRLTHQNTGRTAATEFSANATHKQS----NNN 978
            +  +V S L  ++ RL    T  T +   + N TH  S    NNN
Sbjct: 195  SLDEVASKLRGYDDRLQSYVTEPTISPHVAFNVTHSDSGYYHNNN 239



 Score = 74.7 bits (182), Expect(4) = 9e-58
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = -3

Query: 216 LCSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGPAPLLSRGGFRFYFSLVDDYSRFTW 37
           +C +C   K  +LP+  ST  +  PL+ +  D+WGP+P  S  GFR+Y   +D YSRFTW
Sbjct: 491 VCEACHLGKSTRLPFMLSTFNASRPLERIHCDLWGPSPTSSVQGFRYYVVFIDHYSRFTW 550

Query: 36  IFPLKCKSD 10
            +PLK KSD
Sbjct: 551 FYPLKLKSD 559



 Score = 73.9 bits (180), Expect(4) = 9e-58
 Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
 Frame = -1

Query: 617 TVRIGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHS 438
           ++ + DGN LPI H GS SIASS G   L ++   P I K+L+SV +   D     EF +
Sbjct: 354 SIMVADGNFLPITHTGSGSIASSSGKIPLKEVLVCPDIVKSLLSVSKLTSDYPCSVEFDA 413

Query: 437 SFFCVKDSQTQKILLQGPTKDGMNVFPSSSPQAHV-----HERVTPSQWHLRLKHPSMQL 273
               + D  T+K+L+ G  +DG+  +    P+  V         +   WH RL H + ++
Sbjct: 414 DSVRINDKATKKLLVMGRNRDGL--YSLEEPKLQVLYSTRQNSASSEVWHRRLGHANAEV 471

Query: 272 VHKIIS 255
           +H++ S
Sbjct: 472 LHQLAS 477



 Score = 42.7 bits (99), Expect(4) = 9e-58
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = -2

Query: 856 CQVCHKQGHTATTCYYRFDFNYQPP--PPSSLSANFTSGAQYPLPSPTLADSNWYPDSAA 683
           CQ+C K GH A  C++RFD +YQ    P +  +   T    +           W PDSAA
Sbjct: 280 CQICGKAGHHALKCWHRFDNSYQHEDLPMALATMRITDVTDH-------HGHEWIPDSAA 332

Query: 682 THHFTHD 662
           + H T++
Sbjct: 333 SAHVTNN 339


>ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266915 [Solanum
            lycopersicum]
          Length = 544

 Score = 98.2 bits (243), Expect(4) = 2e-57
 Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
 Frame = -1

Query: 1610 ITVKLTNENYLLWKAQIMPYLKGHNLYGYVDGTMVPPQMFNKMSQLT------PAFLAWQ 1449
            + +KL   NY LW++ +    +  +L G++DGT  P       +Q T      PAF AW+
Sbjct: 37   LPIKLDCGNYYLWQSTVYSAFEAFDLEGHLDGTNSPSATILTTTQDTSASTTNPAFTAWK 96

Query: 1448 QQDQAVMXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKKG 1269
            ++D+  +           I +++   T+ E W  L  L+ + S+AR++Q+  QL T  KG
Sbjct: 97   KRDKIPLLWLKTTTNHSIIPYIMHIRTTREAWSYLSNLYQSQSRARVMQLRHQLQTTTKG 156

Query: 1268 SDSIAEYYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPLTPSQ 1089
            S +I +Y  + + +  +LA+A + ++  E ++ +L  L   Y    +SI   +D LT   
Sbjct: 157  SSTIMDYVDKKRTISHSLALAARPITDEELMSAILFTLDSSYGPFRSSINPHLDNLTTDS 216

Query: 1088 VYSHLLTHESRLTHQNTGRTAATEFSANATHKQSNNNT 975
            +   LL  E +L  +    T + +  ANA  +Q +N +
Sbjct: 217  LLGLLLQEEEKLAEE----TKSFQLQANAISRQYSNRS 250



 Score = 96.3 bits (238), Expect(4) = 2e-57
 Identities = 54/126 (42%), Positives = 77/126 (61%), Gaps = 8/126 (6%)
 Frame = -1

Query: 608 IGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHSSFF 429
           +G+G  L I+H+GSS ++ +     L+K+ HVPSI+K+L+SV QF +DN  + EFH S  
Sbjct: 374 LGNGQKLSINHIGSSKLSCATRPLHLNKILHVPSITKSLLSVSQFTKDNNVFMEFHPSCC 433

Query: 428 CVKDSQTQKILLQGPTKD--------GMNVFPSSSPQAHVHERVTPSQWHLRLKHPSMQL 273
            VKD Q  KILL+G   D        G+ V  SS+P+A V  R +   WH RL HP  QL
Sbjct: 434 FVKDPQ-GKILLRGSIDDGLYRFDGGGLPVISSSTPRAFVISRASLQAWHERLGHPHEQL 492

Query: 272 VHKIIS 255
           + +++S
Sbjct: 493 LRRLVS 498



 Score = 60.5 bits (145), Expect(4) = 2e-57
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
 Frame = -2

Query: 856 CQVCHKQGHTATTCYYRFDFNYQPPPPSS--LSANFTSGAQYPLPSPT-LADSNWYPDSA 686
           CQ+C K  H A  CY R + +  PP  SS    AN  + +   + SP+ + D++W+ DS 
Sbjct: 289 CQICEKPNHHARNCYNRNNMDTYPPTRSSNRPQANMVTPSTNSMMSPSAIIDNSWFADSG 348

Query: 685 ATHHFTHDFSNLTLNPSEYKGDEQ 614
           AT+H T D S L+++  +Y G++Q
Sbjct: 349 ATNHVTSDLSQLSIH-MDYNGEDQ 371



 Score = 38.9 bits (89), Expect(4) = 2e-57
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -3

Query: 246 LPITQSNSSGLCSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDV 118
           LP+T +    +C SC   K H++P   S+ RS  P  L++ DV
Sbjct: 502 LPVTSNKMPAVCGSCQLGKSHRIPLASSSSRSSFPFDLVYYDV 544


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score =  115 bits (288), Expect(3) = 2e-55
 Identities = 73/221 (33%), Positives = 112/221 (50%), Gaps = 12/221 (5%)
 Frame = -1

Query: 1610 ITVKLTNENYLLWKAQIMPYLKGHNLYGYVDG-TMVPP-----------QMFNKMSQLTP 1467
            I+ KLT  N+ LWK  I+P + G  + GY+ G T VP            ++  K+S   P
Sbjct: 17   ISEKLTKNNFSLWKTHILPVICGARMEGYLTGATQVPSAEIEVKEGEKGEITKKVSN--P 74

Query: 1466 AFLAWQQQDQAVMXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQL 1287
            A+ AW   DQ V+           +  V    T+   W ++  L +  S+AR +   + L
Sbjct: 75   AYEAWIAADQQVLGFLLSSISKEILIQVANVDTAAHAWKMIVGLLSTQSRARALNTRIAL 134

Query: 1286 TTLKKGSDSIAEYYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVD 1107
             T +KG  S+++Y  + K L D +A AGK L   EF +++LAGL  DY+ VV+SI  R +
Sbjct: 135  ATTQKGESSVSDYISKMKTLADEMASAGKPLDDEEFTSYILAGLDSDYEQVVSSIVGRSE 194

Query: 1106 PLTPSQVYSHLLTHESRLTHQNTGRTAATEFSANATHKQSN 984
             +T S+VYS LL+ E     Q  G + +     +A H ++N
Sbjct: 195  GVTISEVYSQLLSFEE--LWQTNGSSGSYSSVNSANHGRNN 233



 Score = 93.6 bits (231), Expect(3) = 2e-55
 Identities = 53/139 (38%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
 Frame = -1

Query: 614 VRIGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHSS 435
           +    G+ + I H+G S+I +   N  L  + HVP   KNL+S  +   DN A+ E H  
Sbjct: 344 IHTASGSGMDIKHIGQSTIRTPTRNLYLRNILHVPRTKKNLISAHRLAVDNHAFVEVHPR 403

Query: 434 FFCVKDSQTQKILLQGPTKDGMNVFP---SSSPQAHVHERVTPSQWHLRLKHPSMQLVHK 264
           FF +KD  T+  LL+GP  +G+   P   SSS Q     + T S WH RL HPS Q+V K
Sbjct: 404 FFAIKDQITKNTLLRGPCCNGLYPLPASTSSSKQVLGAIKPTVSIWHSRLGHPSWQIVQK 463

Query: 263 IIS--QVLFLSRSPTLRVC 213
           ++S   +  L  S  L VC
Sbjct: 464 VVSHNNLPCLGESKELGVC 482



 Score = 57.4 bits (137), Expect(3) = 2e-55
 Identities = 30/83 (36%), Positives = 41/83 (49%)
 Frame = -2

Query: 862 PTCQVCHKQGHTATTCYYRFDFNYQPPPPSSLSANFTSGAQYPLPSPTLADSNWYPDSAA 683
           PTCQ+C K GH    C++ +D ++ P       A   + A Y +      DSNWY D+ A
Sbjct: 274 PTCQLCSKVGHVVADCWHCYDDSFVP------DARVAAAASYGV------DSNWYVDTGA 321

Query: 682 THHFTHDFSNLTLNPSEYKGDEQ 614
           T H T++   LT     Y G EQ
Sbjct: 322 TDHITNELEKLTTR-DRYNGKEQ 343



 Score = 90.5 bits (223), Expect = 2e-15
 Identities = 45/88 (51%), Positives = 61/88 (69%)
 Frame = -3

Query: 270 AQNNLPSALPITQSNSSGLCSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGPAPLLSR 91
           + NNLP    + +S   G+C +C K K HQLP+ +ST  S  PL+L+F DVWGPAP  S 
Sbjct: 466 SHNNLPC---LGESKELGVCDACQKGKSHQLPFLKSTSASNFPLELVFSDVWGPAP-DSV 521

Query: 90  GGFRFYFSLVDDYSRFTWIFPLKCKSDV 7
           GG ++Y S +DD+S+FTWI+ LK KS+V
Sbjct: 522 GGRKYYVSFIDDFSKFTWIYLLKQKSEV 549


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  110 bits (274), Expect(3) = 1e-54
 Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 20/229 (8%)
 Frame = -1

Query: 1610 ITVKLTNENYLLWKAQIMPYLKGHNLYGYVDGTMVPPQMF-----NKMSQLTPAFLAWQQ 1446
            ++ KL N N+L+ + QI+  L+GH L  ++  T V P  F        + + P F  W+Q
Sbjct: 19   VSSKLDNHNFLVXRKQILTTLRGHKLQHFLSETSVLPSEFLSSDDETQNHVNPKFQDWEQ 78

Query: 1445 QDQAVMXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKKGS 1266
            Q Q +M           +  ++   TS ++W  LE  FA   +A++ Q   QL   KKG 
Sbjct: 79   QXQLIMSXLLASITDALLTRMVNCDTSAQVWKTLELYFATQVRAKVTQFKTQLHNTKKGD 138

Query: 1265 DSIAEYYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPLTPSQV 1086
             SI++Y  + + ++D LA+ G  +S  + I  +  GL  DY++ + S+ +R+DP T  ++
Sbjct: 139  LSISDYLLKIRNVVDLLALVGHKISVKDHIBAIFEGLPQDYETFIISVNSRLDPYTVEEI 198

Query: 1085 YSHLLTHESRLTHQ---------------NTGRTAATEFSANATHKQSN 984
             + LL  ESR+                   T R  +  F+  A+ + SN
Sbjct: 199  EALLLAQESRIEKNIKIADFSTPSLAHLITTNRNGSPHFNYRASTRNSN 247



 Score = 90.1 bits (222), Expect(3) = 1e-54
 Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 25/156 (16%)
 Frame = -1

Query: 614 VRIGDGNALPIHHVGSSSIASSH---GNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEF 444
           V +G+G  LPIHH+G +S +SS        L +L HVP I+KNL+SV +F  DN  +FEF
Sbjct: 382 VFVGNGKGLPIHHIGHTSFSSSFIPSKTLALKQLLHVPEITKNLLSVSKFAADNHVFFEF 441

Query: 443 HSSFFCVKDSQTQKILLQGPTKDGMNVFPSSSPQAHVH-------------ERVTPSQ-- 309
           H +   VKD  T+ +L+ G  K G+ VF ++  +  +H             E   P+   
Sbjct: 442 HPTSCFVKDPSTRTVLMHGQLKGGLYVFDNTQLKLPLHNSSCFASTALPSKEPTVPASPT 501

Query: 308 -----WHLRLKHPSMQLVHKIISQ--VLFLSRSPTL 222
                WH RL HPS  +V  ++++  +  L++ P+L
Sbjct: 502 SPFTLWHNRLGHPSSHIVSLVLNKCNLPHLNKIPSL 537



 Score = 63.5 bits (153), Expect(3) = 1e-54
 Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 18/101 (17%)
 Frame = -2

Query: 862 PTCQVCHKQGHTATTCYYRFDFNYQPPPP--------------SSLSANFTSGAQYPLPS 725
           P CQ+C + GH    CYYRFD ++  P                  LS  F  G   P   
Sbjct: 284 PQCQLCGRIGHVVMQCYYRFDQSFTGPSQLQGNRPQGNMAHLHQQLSEXFFPGT--PSVK 341

Query: 724 PTLA----DSNWYPDSAATHHFTHDFSNLTLNPSEYKGDEQ 614
           PT A    D+NWYPDS ATHH T + +NL L  S++   ++
Sbjct: 342 PTTAEIIQDNNWYPDSGATHHLTPNLNNL-LTKSQFPSSDE 381



 Score = 73.9 bits (180), Expect = 2e-10
 Identities = 34/79 (43%), Positives = 46/79 (58%)
 Frame = -3

Query: 246 LPITQSNSSGLCSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGPAPLLSRGGFRFYFS 67
           LP      S +CS CC  K+H+  +  ST     PL+L+  D+WGPA   S  G ++Y  
Sbjct: 528 LPHLNKIPSLICSXCCMGKIHKSSFLHSTSSYTKPLELIHTDLWGPASTPSSHGHQYYIH 587

Query: 66  LVDDYSRFTWIFPLKCKSD 10
            +D YSRFTWI+ LK KS+
Sbjct: 588 FIDAYSRFTWIYMLKHKSE 606


>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
          Length = 1501

 Score =  107 bits (266), Expect(4) = 2e-54
 Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 2/214 (0%)
 Frame = -1

Query: 1610 ITVKLTNENYLLWKAQIMPYLKGHNLYGYVDGTMVPPQMF--NKMSQLTPAFLAWQQQDQ 1437
            IT+KL++ NYLLWK+Q++P L+  +L  YVDGT+VPP  F     + L+  +LAW+  DQ
Sbjct: 18   ITIKLSSSNYLLWKSQLLPLLESQDLLAYVDGTLVPPPRFEPETSTTLSTKYLAWKAADQ 77

Query: 1436 AVMXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKKGSDSI 1257
             ++           IA V+  ST+ E+W+ LE  F+  S+AR +++   L  +K G+  +
Sbjct: 78   RLLCLLLSSLTEEAIAVVVGLSTAREVWLALENTFSHHSKARELRLKDDLQLMKCGTKPV 137

Query: 1256 AEYYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPLTPSQVYSH 1077
            AEY R  K L D L   G+ +  ++ + + L G    +     S    ++   P+   + 
Sbjct: 138  AEYARTFKTLCDQLHAIGRPVEDTDKVHWFLRGTRPRFFQFFYSSNXSLESSEPTTA-AF 196

Query: 1076 LLTHESRLTHQNTGRTAATEFSANATHKQSNNNT 975
              T+ SR T   T   A        +H  +NN++
Sbjct: 197  TATNRSRTTSHGT-PFAFRNNQRGRSHSHNNNSS 229



 Score = 96.3 bits (238), Expect(4) = 2e-54
 Identities = 46/91 (50%), Positives = 58/91 (63%)
 Frame = -3

Query: 282 HATSAQNNLPSALPITQSNSSGLCSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGPAP 103
           HA     +L S LP     S  LCS+C  AK H+LPY R+ HRS   L L+  D+WGP+P
Sbjct: 423 HARLGHLSLTSLLP-----SPSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSP 477

Query: 102 LLSRGGFRFYFSLVDDYSRFTWIFPLKCKSD 10
           + S  GF +Y   +DDYSRFTW++PLK KSD
Sbjct: 478 IKSNSGFLYYVIFIDDYSRFTWLYPLKFKSD 508



 Score = 43.5 bits (101), Expect(4) = 2e-54
 Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
 Frame = -1

Query: 617 TVRIGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHS 438
           +V +G+G +LPI H G+ S      N  L  +  V  ++KNL+S+ +   D      F +
Sbjct: 317 SVIVGNGASLPITHTGTLSPVP---NIHLLDVLVVXHLTKNLLSISKLTSDFPLSVTFTN 373

Query: 437 SFFCVKDSQTQKILLQGPTKDGMNVFPSS-----SPQAHVHERVTPSQWHLRLKHPSM 279
           + F V++ QT + +  G    G+ V         S   +   R +   WH RL H S+
Sbjct: 374 NLFTVQNRQTGRXVATGKRDGGLYVLERGNSAFISVLKNKSLRASYDLWHARLGHLSL 431



 Score = 36.6 bits (83), Expect(4) = 2e-54
 Identities = 25/85 (29%), Positives = 37/85 (43%)
 Frame = -2

Query: 862 PTCQVCHKQGHTATTCYYRFDFNYQPPPPSSLSANFTSGAQYPLPSPTLADSNWYPDSAA 683
           P CQ+C  +GH A  C  R+    +    + L+  F +     L  P  AD  W+ D+ A
Sbjct: 243 PRCQICRIEGHYADRCNQRY---ARTDSSAHLAEAFNTSCS--LSGPEAAD--WFLDTGA 295

Query: 682 THHFTHDFSNLTLNPSEYKGDEQCV 608
           + H T D S L      Y G +  +
Sbjct: 296 SAHMTTDPSXLD-QSKNYMGKDSVI 319


>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
          Length = 1429

 Score = 94.4 bits (233), Expect(4) = 2e-54
 Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 3/211 (1%)
 Frame = -1

Query: 1601 KLTNENYLLWKAQIMPYLKGHNLYGYVDGTMVPPQMFNKMSQLT---PAFLAWQQQDQAV 1431
            KLT+ N+L+W+ Q+   L G++L GYVDG++  P     +  +T   P +  W++QD+ +
Sbjct: 6    KLTSTNFLMWRRQVHALLDGYDLAGYVDGSIEEPHTTVTVHGVTSPNPEYKLWKRQDKLI 65

Query: 1430 MXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKKGSDSIAE 1251
                           + +A+TS +IW  L + +A  S+    Q+  Q+   KKGS SI +
Sbjct: 66   YSGLIGAISVAVQPLLSQATTSAQIWRKLVDTYANPSRGHKQQIREQIKQWKKGSRSIDD 125

Query: 1250 YYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPLTPSQVYSHLL 1071
            Y        D LA+  + +   + I ++L GL  DY  V+  I  R    + ++++  L+
Sbjct: 126  YVLGLTTRFDQLALLEEAIPHEDQIAYILGGLSDDYRRVIDQIEGRDISPSITELHEKLI 185

Query: 1070 THESRLTHQNTGRTAATEFSANATHKQSNNN 978
              E +L  Q     ++T  +ANA    +NNN
Sbjct: 186  NFELKL--QAMVPDSSTPVTANAASYNNNNN 214



 Score = 79.3 bits (194), Expect(4) = 2e-54
 Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
 Frame = -1

Query: 614 VRIGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHSS 435
           V I DG+ LPI H GS+ + +   +  L  + +VP++SKNL+SV + C  N    EF  +
Sbjct: 343 VTIADGSGLPISHTGSALLPTPSRSLALKDILYVPNVSKNLISVYRLCNANQVSVEFFPA 402

Query: 434 FFCVKDSQTQKILLQGPTKDGMNVFPSSSPQ-----AHVHERVTPSQWHLRLKHPSMQLV 270
            F VKD  T   LLQG T++ +  +P +        A    +   S WH RL HP++ ++
Sbjct: 403 HFQVKDLNTGARLLQGRTRNELYEWPVNQKSITILTASPSPKTDLSSWHQRLGHPALPIL 462

Query: 269 HKIIS 255
             ++S
Sbjct: 463 KDVVS 467



 Score = 67.4 bits (163), Expect(4) = 2e-54
 Identities = 33/86 (38%), Positives = 50/86 (58%)
 Frame = -3

Query: 264 NNLPSALPITQSNSSGLCSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGPAPLLSRGG 85
           N +P  LP         CS C   K H+LP+  +T  S  PL+ L+ DVW  +P +S   
Sbjct: 475 NTIPKQLP---------CSDCSINKSHKLPFFTNTIVSSQPLEYLYTDVW-TSPCISVDN 524

Query: 84  FRFYFSLVDDYSRFTWIFPLKCKSDV 7
           +++Y  +VD ++R+TW++PLK KS V
Sbjct: 525 YKYYLVIVDHFTRYTWMYPLKQKSQV 550



 Score = 42.0 bits (97), Expect(4) = 2e-54
 Identities = 33/96 (34%), Positives = 42/96 (43%), Gaps = 16/96 (16%)
 Frame = -2

Query: 856 CQVCHKQGHTATTCYYRFDFNYQPPPPSSLSANFTSGAQYPL----PSP----------- 722
           CQ+C   GH+A  C       +QP   S  S +  SG  YP     PSP           
Sbjct: 254 CQICGVHGHSARRCS-----QFQPYGGSGGSQSVPSG--YPTNGYSPSPMAPWQPRANIA 306

Query: 721 TLADSN-WYPDSAATHHFTHDFSNLTLNPSEYKGDE 617
           T    N W  DS ATHH T D +NL+++     G+E
Sbjct: 307 TAPPFNPWVLDSGATHHLTSDLANLSMHQPYTGGEE 342


>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
            gi|7268438|emb|CAB80958.1| retrotransposon like protein
            [Arabidopsis thaliana]
          Length = 1474

 Score =  108 bits (271), Expect(3) = 4e-50
 Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 3/211 (1%)
 Frame = -1

Query: 1601 KLTNENYLLWKAQIMPYLKGHNLYGYVDG---TMVPPQMFNKMSQLTPAFLAWQQQDQAV 1431
            KLT+ NYL+W  QI   L G+ L G++DG   T  P    N +    P +  W++QD+ +
Sbjct: 33   KLTSNNYLMWSLQIHALLDGYELAGHLDGSIETPAPTLTTNNVVSANPQYTLWKRQDRLI 92

Query: 1430 MXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKKGSDSIAE 1251
                           V  A+ + +IW  L   +A +S   I Q+  Q+  LKKG+ +I E
Sbjct: 93   FSALIGAISPPVQPLVSRATKASQIWKTLTNTYAKSSYDHIKQLRTQIKQLKKGTKTIDE 152

Query: 1250 YYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPLTPSQVYSHLL 1071
            Y      LLD LA+ GK +   E +  +L GL  DY +VV  I  + +  + ++++  L+
Sbjct: 153  YVLSHTTLLDQLAILGKPMEHEEQVERILEGLPEDYKTVVDQIEGKDNTPSITEIHERLI 212

Query: 1070 THESRLTHQNTGRTAATEFSANATHKQSNNN 978
             HE++L       +++   SAN   ++ +NN
Sbjct: 213  NHEAKLLSTAALSSSSLPMSANVAQQRHHNN 243



 Score = 88.2 bits (217), Expect(3) = 4e-50
 Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
 Frame = -1

Query: 614 VRIGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHSS 435
           V I DG +L I   GS+ + S+  +  L+K+ +VP I KNLVSV + C  N    EF  +
Sbjct: 361 VMIADGTSLKITKTGSTFLPSNARDLTLNKVLYVPDIQKNLVSVYRLCNTNQVSVEFFPA 420

Query: 434 FFCVKDSQTQKILLQGPTKDGMNVFPSSSPQAHV-----HERVTPSQWHLRLKHPSMQLV 270
            F VKD  T  +LLQG TKD +  +P ++P+A         + T S WH RL HPS  ++
Sbjct: 421 SFQVKDLNTGTLLLQGRTKDELYEWPVTNPKATALFTTPSPKTTLSSWHSRLGHPSSSIL 480

Query: 269 HKIISQ 252
           + +IS+
Sbjct: 481 NTLISK 486



 Score = 51.2 bits (121), Expect(3) = 4e-50
 Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
 Frame = -2

Query: 877 FAPI*PTCQVCHKQGHTATTCYYRFDFNYQPPPPSSLSANFTSG---AQYPLPSPTLADS 707
           F P    CQ+C+ QGH+A  C          P  SS ++ FT     A   + +P  A+ 
Sbjct: 276 FKPYLGKCQICNVQGHSARRCP---QLQAMQPSSSSSASTFTPWQPRANLAMGAPYTAN- 331

Query: 706 NWYPDSAATHHFTHDFSNLTLNPSEYKGDE 617
           NW  DS ATHH T D + L L+   Y GD+
Sbjct: 332 NWLLDSGATHHITSDLNALALH-QPYNGDD 360



 Score = 73.2 bits (178), Expect = 4e-10
 Identities = 39/94 (41%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
 Frame = -3

Query: 279 ATSAQNNLPS--ALPITQSNSSGL-CSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGP 109
           ++S  N L S  +LP++ S S+ L CS C   K H+LP+  S+ +S +PL+ +F DVW  
Sbjct: 476 SSSILNTLISKFSLPVSVSASNKLACSDCFINKSHKLPFSISSIKSTSPLEYIFSDVW-M 534

Query: 108 APLLSRGGFRFYFSLVDDYSRFTWIFPLKCKSDV 7
           +P+LS   +++Y  LVD ++R+TW++PL+ KS V
Sbjct: 535 SPILSPDNYKYYLVLVDHHTRYTWLYPLQQKSQV 568


>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
          Length = 646

 Score =  105 bits (261), Expect(3) = 4e-49
 Identities = 57/133 (42%), Positives = 80/133 (60%), Gaps = 13/133 (9%)
 Frame = -1

Query: 614 VRIGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHSS 435
           V +G+G  L + H G SSI +S G  LL  + HVP I+ NLVSV++ C DN AY EF+ S
Sbjct: 396 VIVGNGKGLYVLHTGHSSIPTSQGALLLKNVLHVPKIAANLVSVQKLCHDNNAYVEFYPS 455

Query: 434 FFCVKDSQTQKILLQGPTKDGMNVFPSS----SPQAHVHERVTPSQ---------WHLRL 294
           +F VKD +TQ ILL+G    G+   PS+    +PQA V +  + S          WH RL
Sbjct: 456 YFAVKDQKTQAILLKGGLDKGLYSVPSAYSSHAPQARVFQIFSTSSSTSIDSMRLWHNRL 515

Query: 293 KHPSMQLVHKIIS 255
            HPS+ +V+K+++
Sbjct: 516 GHPSLAIVNKVLN 528



 Score = 71.2 bits (173), Expect(3) = 4e-49
 Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
 Frame = -2

Query: 862 PTCQVCHKQGHTATTCYYRFDFNYQPPPPSSLSANFTSGAQYP---LPSP-TLADSNWYP 695
           P CQ+C K GH AT C++RFD  +Q  P +S S  F+S AQ P   + +P  L ++ W+ 
Sbjct: 312 PQCQICCKIGHVATECWHRFDNQFQ--PKASHSNQFSSSAQDPQALMAAPGLLGETPWFL 369

Query: 694 DSAATHHFTHDFSNLTLNPSEYKGDEQCV 608
           D+ ATHH T D +NL+L+ + + GD++ +
Sbjct: 370 DTGATHHVTSDLANLSLH-NPFSGDDKVI 397



 Score = 68.6 bits (166), Expect(3) = 4e-49
 Identities = 30/81 (37%), Positives = 48/81 (59%)
 Frame = -3

Query: 246 LPITQSNSSGLCSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGPAPLLSRGGFRFYFS 67
           LP+    +  LC SC  AK H+LP+ R+  ++  P  L+  D+WG    LS  G  ++  
Sbjct: 532 LPVFSLQNKLLCDSCQLAKSHKLPFVRNYSKAMKPFDLVHADLWGSPSCLSVNGACYFLL 591

Query: 66  LVDDYSRFTWIFPLKCKSDVV 4
           L+DDYSRF+W++ L+ K + +
Sbjct: 592 LIDDYSRFSWLYLLQSKDETL 612



 Score =  111 bits (278), Expect = 9e-22
 Identities = 60/201 (29%), Positives = 112/201 (55%), Gaps = 10/201 (4%)
 Frame = -1

Query: 1610 ITVKLTNENYLLWKAQIMPYLKGHNLYGYVDGTMVPPQMFNKMSQ----------LTPAF 1461
            +T+KL   N+L+W+ Q++  +  +     ++GT   P  +  ++           L P +
Sbjct: 45   LTIKLDRNNFLIWRNQLLNIVVANGYEDILEGTRSCPYQWIAVTDTASTTHGSVILNPEY 104

Query: 1460 LAWQQQDQAVMXXXXXXXXXXXIAHVLEASTSHEIWIVLEELFAATSQARIVQVLLQLTT 1281
            + WQ+Q++ VM           +  ++  +++ EIW  L E +A+ S+ARI+++ LQL T
Sbjct: 105  VLWQRQNRLVMSWIYSSLTEQMMTQIMAYNSACEIWTALRESYASASRARIMELRLQLQT 164

Query: 1280 LKKGSDSIAEYYRRAKLLLDTLAMAGKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPL 1101
             +KG  S+ +Y  R + + D L   G+ +S  + +  +LAGLG +Y+ +V SIT+R+D +
Sbjct: 165  TRKGGLSVMDYMLRIQHICDHLRAIGESVSIDDQVMAVLAGLGSEYNPIVASITSRLDSI 224

Query: 1100 TPSQVYSHLLTHESRLTHQNT 1038
            +   + S+L T+E RL  QN+
Sbjct: 225  SVQALQSYLETYEKRLEIQNS 245


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score = 92.0 bits (227), Expect(3) = 2e-48
 Identities = 45/88 (51%), Positives = 62/88 (70%)
 Frame = -3

Query: 270  AQNNLPSALPITQSNSSGLCSSCCKAKLHQLPYGRSTHRSPAPLQLLFVDVWGPAPLLSR 91
            + NNLP    +   N SG+C++C +AK HQLPY +S   S  PL+L+F DVWGPAP  S 
Sbjct: 1433 SSNNLPC---LGDVNESGVCNACQQAKSHQLPYPKSFSVSNNPLELVFSDVWGPAP-TSV 1488

Query: 90   GGFRFYFSLVDDYSRFTWIFPLKCKSDV 7
            GG ++Y S +DD+S+FTWI+ LK K++V
Sbjct: 1489 GGRKYYVSFIDDFSKFTWIYLLKSKAEV 1516



 Score = 91.3 bits (225), Expect(3) = 2e-48
 Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
 Frame = -1

Query: 614  VRIGDGNALPIHHVGSSSIASSHGNFLLSKLYHVPSISKNLVSVRQFCEDNCAYFEFHSS 435
            +    G  + I HVG S I +   N  L  + HVP   KNL+S  +   DN A+ E H  
Sbjct: 1310 IHTASGAGMDIKHVGHSIIHTPICNIQLKNILHVPKAEKNLISAHRLAVDNHAFVEVHPR 1369

Query: 434  FFCVKDSQTQKILLQGPTKDGMNVFPSS----SPQAHVHERVTPSQWHLRLKHPSMQLVH 267
            FF +KD  T+ +LL+GP ++G+   P+S    S Q     + T S+WH RL HPS+ +V 
Sbjct: 1370 FFAIKDQVTKNLLLRGPCRNGLYPLPTSSLATSKQVLGAIKPTMSRWHSRLGHPSLAIVQ 1429

Query: 266  KIIS 255
            K++S
Sbjct: 1430 KVVS 1433



 Score = 59.7 bits (143), Expect(3) = 2e-48
 Identities = 29/82 (35%), Positives = 43/82 (52%)
 Frame = -2

Query: 859  TCQVCHKQGHTATTCYYRFDFNYQPPPPSSLSANFTSGAQYPLPSPTLADSNWYPDSAAT 680
            TCQ+C K GH    C+YR+D N+ P   ++ +A++              D+NWY D+ AT
Sbjct: 1241 TCQLCGKIGHVVADCWYRYDENFIPDSKTAAAASYG------------VDTNWYMDTGAT 1288

Query: 679  HHFTHDFSNLTLNPSEYKGDEQ 614
             H T +   LT +  +Y G EQ
Sbjct: 1289 DHITGELDKLTTH-EKYNGKEQ 1309



 Score = 75.1 bits (183), Expect = 1e-10
 Identities = 36/110 (32%), Positives = 66/110 (60%)
 Frame = -1

Query: 1385 VLEASTSHEIWIVLEELFAATSQARIVQVLLQLTTLKKGSDSIAEYYRRAKLLLDTLAMA 1206
            V+   T+   W V+  + ++ S+AR +   L L+T +KG  S+ EY  + K L D ++ A
Sbjct: 1064 VVNLETAAATWRVITTMLSSQSRARALNTRLALSTTRKGDLSVTEYIGKMKTLADEMSSA 1123

Query: 1205 GKILSSSEFITFLLAGLGIDYDSVVTSITTRVDPLTPSQVYSHLLTHESR 1056
            GK L   E ++++L GL  DY+ VV+++  + + +  +++Y+ LL+ ESR
Sbjct: 1124 GKPLDDEEMMSYILPGLDDDYEPVVSTLVGKAEAVPVAEIYTQLLSFESR 1173