BLASTX nr result

ID: Akebia25_contig00004422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00004422
         (365 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512711.1| eukaryotic peptide chain release factor subu...    60   4e-07
ref|XP_007049919.1| Eukaryotic release factor 1-3 isoform 1 [The...    59   9e-07
ref|XP_003548046.1| PREDICTED: eukaryotic peptide chain release ...    58   1e-06
ref|XP_002297898.1| Eukaryotic peptide chain release factor subu...    57   3e-06
gb|ABK95851.1| unknown [Populus trichocarpa]                           57   3e-06
ref|XP_003624559.1| Eukaryotic peptide chain release factor subu...    57   3e-06

>ref|XP_002512711.1| eukaryotic peptide chain release factor subunit, putative [Ricinus
           communis] gi|223548672|gb|EEF50163.1| eukaryotic peptide
           chain release factor subunit, putative [Ricinus
           communis]
          Length = 436

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -3

Query: 363 GGIGGILRYQLDIRSFDELSDDEVYGDSE 277
           GGIGGILRYQLD+R FDELSDDEVYGDSE
Sbjct: 408 GGIGGILRYQLDMRDFDELSDDEVYGDSE 436


>ref|XP_007049919.1| Eukaryotic release factor 1-3 isoform 1 [Theobroma cacao]
           gi|590714459|ref|XP_007049920.1| Eukaryotic release
           factor 1-3 isoform 1 [Theobroma cacao]
           gi|590714463|ref|XP_007049921.1| Eukaryotic release
           factor 1-3 isoform 1 [Theobroma cacao]
           gi|508702180|gb|EOX94076.1| Eukaryotic release factor
           1-3 isoform 1 [Theobroma cacao]
           gi|508702181|gb|EOX94077.1| Eukaryotic release factor
           1-3 isoform 1 [Theobroma cacao]
           gi|508702182|gb|EOX94078.1| Eukaryotic release factor
           1-3 isoform 1 [Theobroma cacao]
          Length = 436

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -3

Query: 363 GGIGGILRYQLDIRSFDELSDDEVYGDSE 277
           GGIGGILRYQLD+RSFDELSDDEVY DSE
Sbjct: 408 GGIGGILRYQLDMRSFDELSDDEVYDDSE 436


>ref|XP_003548046.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
           [Glycine max]
          Length = 436

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -3

Query: 363 GGIGGILRYQLDIRSFDELSDDEVYGDSE 277
           GGIGGILRYQLDIRSFDELSDDEVY DS+
Sbjct: 408 GGIGGILRYQLDIRSFDELSDDEVYEDSD 436


>ref|XP_002297898.1| Eukaryotic peptide chain release factor subunit 1-2 family protein
           [Populus trichocarpa] gi|222845156|gb|EEE82703.1|
           Eukaryotic peptide chain release factor subunit 1-2
           family protein [Populus trichocarpa]
          Length = 436

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = -3

Query: 363 GGIGGILRYQLDIRSFDELSDDEVYGDSE 277
           GGIGGILRYQLD+RSFDELSD+EVY DSE
Sbjct: 408 GGIGGILRYQLDMRSFDELSDEEVYDDSE 436


>gb|ABK95851.1| unknown [Populus trichocarpa]
          Length = 243

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = -3

Query: 363 GGIGGILRYQLDIRSFDELSDDEVYGDSE 277
           GGIGGILRYQLD+RSFDELSD+EVY DSE
Sbjct: 215 GGIGGILRYQLDMRSFDELSDEEVYDDSE 243


>ref|XP_003624559.1| Eukaryotic peptide chain release factor subunit 1-1 [Medicago
           truncatula] gi|355499574|gb|AES80777.1| Eukaryotic
           peptide chain release factor subunit 1-1 [Medicago
           truncatula] gi|388492358|gb|AFK34245.1| unknown
           [Medicago truncatula]
          Length = 435

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = -3

Query: 363 GGIGGILRYQLDIRSFDELSDDEVYGDSE 277
           GGIGG+LRYQLDIRSFDELSDDEVY DS+
Sbjct: 407 GGIGGMLRYQLDIRSFDELSDDEVYEDSD 435


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