BLASTX nr result

ID: Akebia25_contig00004218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00004218
         (4395 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...  1069   0.0  
emb|CBI34982.3| unnamed protein product [Vitis vinifera]             1053   0.0  
ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron sp...  1009   0.0  
ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron sp...  1001   0.0  
ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron sp...   993   0.0  
ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron sp...   991   0.0  
ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citr...   991   0.0  
ref|XP_007031356.1| CRM family member 2, putative isoform 2 [The...   990   0.0  
gb|EXC45069.1| Chloroplastic group IIA intron splicing facilitat...   989   0.0  
ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron sp...   985   0.0  
ref|XP_002517407.1| conserved hypothetical protein [Ricinus comm...   972   0.0  
ref|XP_007031355.1| CRM family member 2, putative isoform 1 [The...   970   0.0  
ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron sp...   965   0.0  
ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron sp...   964   0.0  
ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron sp...   958   0.0  
gb|EYU44699.1| hypothetical protein MIMGU_mgv1a000630mg [Mimulus...   951   0.0  
ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   951   0.0  
ref|XP_006849108.1| hypothetical protein AMTR_s00028p00245370 [A...   949   0.0  
ref|XP_006408495.1| hypothetical protein EUTSA_v10019986mg [Eutr...   937   0.0  
ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|2...   927   0.0  

>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1044

 Score = 1069 bits (2765), Expect = 0.0
 Identities = 581/997 (58%), Positives = 717/997 (71%), Gaps = 33/997 (3%)
 Frame = -3

Query: 3199 QNVSKTAIKRIAEKLRSLGYIEEDEHNSNQNPQPKTIHGSAGEIFLPFSHQFPKHRVGHT 3020
            Q + KTAI+RIAEKLRSLGY++ DE     +   K  +GSAGEIF+P  +Q PKHRVGHT
Sbjct: 75   QTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSD-KPANGSAGEIFVPLPNQLPKHRVGHT 133

Query: 3019 IDSSWSTPENPVPEPGSGSVITRFHELKSEVEKQKGSPKRE-ERVPTLAELTIPVEEXXX 2843
            ID SWS PENPVPEPG+G VITRFHEL+ EV+++K   ++E ER PTLAELT+P EE   
Sbjct: 134  IDQSWSLPENPVPEPGTGGVITRFHELRKEVKREKKLVRKEDERAPTLAELTLPEEELRR 193

Query: 2842 XXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCEDLSRMNMKRTHDLLERKT 2663
                       L VGKAGITEGIVNGIHERWRR+EVVKIRCED+ ++NMKRTHD+LERKT
Sbjct: 194  LKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKT 253

Query: 2662 GGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXXXDELSSEFSMVNRVDSRKD----- 2498
            GGLVIWRSGS IILYRGANYKYPYFL            + SS+  M N     K+     
Sbjct: 254  GGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSH-DASSDSQMNNEEHDGKEVCSSG 312

Query: 2497 -----------------LSLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWG 2369
                             LSL+ GVG P+RVRFQLPGEAQL EEADRLLDGLGPRFTDWWG
Sbjct: 313  KGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWG 372

Query: 2368 YDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNL 2189
            YDP+P+DADLL A VPGYRRPFRLLPYG+KPKLT+DEMT LRRL RPLP HFALGRN+ L
Sbjct: 373  YDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKL 432

Query: 2188 QGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLISRDSDFIAFYRGKD 2009
            QGLAASM+KLWEKCEIAK+AVKRGVQNTNSEMMA+ELK LTGGTL+SRD +FI FYRGKD
Sbjct: 433  QGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKD 492

Query: 2008 FLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSELELRTNEPASVDELQETNDQNKRK 1829
            FLPPAVS+AIE RRK+ +HR K   D         E EL T+E AS  +   T+DQ K  
Sbjct: 493  FLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESELGTSEHASDKDCDGTDDQ-KTN 551

Query: 1828 LVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGITEEER 1649
             + ++R +RS +  ++R N KLSMALE+K +AE++LAELE+   PQ+PEID+EGITEEER
Sbjct: 552  SLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEER 611

Query: 1648 YMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEA 1469
            YML+KVGL MKP++ +GRRG+FDGTVENMHLHWKYRELVK+IS+ R IE++H  AR LEA
Sbjct: 612  YMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEA 671

Query: 1468 ESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNKKQAMKLSIEAQRRESLKLHV 1289
            ESGGILVAVERV++ YAII++RGKNY+RP +LRP+TLLNK++A+K S+EAQRRESLKLHV
Sbjct: 672  ESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKLHV 731

Query: 1288 LKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETSDQPGFVEYSHNQDNAGSEAFA 1109
            L+LT+NID+LK Q         LV   K K  N+K +  D+        ++ +   E + 
Sbjct: 732  LRLTRNIDELKHQ---------LVSRIKDKETNSK-QLVDK--------SRLHLARERY- 772

Query: 1108 NDQEDMEWCGNDSTPLDLNDCMDASSYSKETIRSEKPMN-PFSHHDESAETELKSSFKSA 932
                     G D   +  +D MD+S  S +T  ++K ++ P     ++ E   + S +S 
Sbjct: 773  ---------GADVILIHSSDGMDSSRDSLQTSHNDKRIDFPSMCDSDTDEANPEPSSESV 823

Query: 931  LKETHSNTFLDEMGDRDDDYSTSLPMNSTSQDTAEPHIYANEFIESSNKLNKRKIESPLD 752
            LKE  +N  L +M +  +  + S  + S  + +    +   E +ESS K +K + + P+ 
Sbjct: 824  LKEIETNV-LTDMNEEGECTTCSEDLVSQGETSCYAIVNHEETMESSVKSSKNEFKPPVQ 882

Query: 751  IDDVEKGSIVPFGAAPLSNRDRLVLRKQALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKH 572
                 + + +PF AAPLSNR+RL+LRKQAL+MKKRPV+A+GR+N+VTGVAKTIK HF+KH
Sbjct: 883  RPVDTRSNEMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKH 942

Query: 571  PLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVSQEPNKVILYRGWIEGEE---PHGVKEK 401
            PLAIVNVKGRAKGTS+QEV+FKLEQATGAV+VSQEP+KVILYRGW   EE    + +   
Sbjct: 943  PLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSKVILYRGWGAREENGRSYRMNRS 1002

Query: 400  IKARTST------QEMVSPQLIEAIRLECGLQSRKEE 308
               +TS       +  VSP+L  AIRLECGL+S +++
Sbjct: 1003 DARKTSAGREGGPRPTVSPELRAAIRLECGLKSNQDK 1039


>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score = 1053 bits (2724), Expect = 0.0
 Identities = 566/950 (59%), Positives = 693/950 (72%), Gaps = 24/950 (2%)
 Frame = -3

Query: 3199 QNVSKTAIKRIAEKLRSLGYIEEDEHNSNQNPQPKTIHGSAGEIFLPFSHQFPKHRVGHT 3020
            Q + KTAI+RIAEKLRSLGY++ DE     +   K  +GSAGEIF+P  +Q PKHRVGHT
Sbjct: 75   QTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSD-KPANGSAGEIFVPLPNQLPKHRVGHT 133

Query: 3019 IDSSWSTPENPVPEPGSGSVITRFHELKSEVEKQKGSPKRE-ERVPTLAELTIPVEEXXX 2843
            ID SWS PENPVPEPG+G VITRFHEL+ EV+++K   ++E ER PTLAELT+P EE   
Sbjct: 134  IDQSWSLPENPVPEPGTGGVITRFHELRKEVKREKKLVRKEDERAPTLAELTLPEEELRR 193

Query: 2842 XXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCEDLSRMNMKRTHDLLERKT 2663
                       L VGKAGITEGIVNGIHERWRR+EVVKIRCED+ ++NMKRTHD+LERKT
Sbjct: 194  LKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKT 253

Query: 2662 GGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXXXDELSSEFSMVNRVDSRKD----- 2498
            GGLVIWRSGS IILYRGANYKYPYFL            + SS+  M N     K+     
Sbjct: 254  GGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSH-DASSDSQMNNEEHDGKEVCSSG 312

Query: 2497 -----------------LSLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWG 2369
                             LSL+ GVG P+RVRFQLPGEAQL EEADRLLDGLGPRFTDWWG
Sbjct: 313  KGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWG 372

Query: 2368 YDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNL 2189
            YDP+P+DADLL A VPGYRRPFRLLPYG+KPKLT+DEMT LRRL RPLP HFALGRN+ L
Sbjct: 373  YDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKL 432

Query: 2188 QGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLISRDSDFIAFYRGKD 2009
            QGLAASM+KLWEKCEIAK+AVKRGVQNTNSEMMA+ELK LTGGTL+SRD +FI FYRGKD
Sbjct: 433  QGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKD 492

Query: 2008 FLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSELELRTNEPASVDELQETNDQNKRK 1829
            FLPPAVS+AIE RRK+ +HR K   D         E EL T+E AS  +   T+DQ K  
Sbjct: 493  FLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESELGTSEHASDKDCDGTDDQ-KTN 551

Query: 1828 LVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGITEEER 1649
             + ++R +RS +  ++R N KLSMALE+K +AE++LAELE+   PQ+PEID+EGITEEER
Sbjct: 552  SLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEER 611

Query: 1648 YMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEA 1469
            YML+KVGL MKP++ +GRRG+FDGTVENMHLHWKYRELVK+IS+ R IE++H  AR LEA
Sbjct: 612  YMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEA 671

Query: 1468 ESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNKKQAMKLSIEAQRRESLKLHV 1289
            ESGGILVAVERV++ YAII++RGKNY+RP +LRP+TLLNK++A+K S+EAQRRESLKLHV
Sbjct: 672  ESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKLHV 731

Query: 1288 LKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETSDQPGFVEYSHNQDNAGSEAFA 1109
            L+LT+NID+LK Q         LV   K K  N+K +  D+        ++ +   E + 
Sbjct: 732  LRLTRNIDELKHQ---------LVSRIKDKETNSK-QLVDK--------SRLHLARERY- 772

Query: 1108 NDQEDMEWCGNDSTPLDLNDCMDASSYSKETIRSEKPMN-PFSHHDESAETELKSSFKSA 932
                     G D   +  +D MD+S  S +T  ++K ++ P     ++ E   + S +S 
Sbjct: 773  ---------GADVILIHSSDGMDSSRDSLQTSHNDKRIDFPSMCDSDTDEANPEPSSESV 823

Query: 931  LKETHSNTFLDEMGDRDDDYSTSLPMNSTSQDTAEPHIYANEFIESSNKLNKRKIESPLD 752
            LKE  +N  L +M +  +  + S  + S  + +    +   E +ESS K +K + + P+ 
Sbjct: 824  LKEIETNV-LTDMNEEGECTTCSEDLVSQGETSCYAIVNHEETMESSVKSSKNEFKPPVQ 882

Query: 751  IDDVEKGSIVPFGAAPLSNRDRLVLRKQALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKH 572
                 + + +PF AAPLSNR+RL+LRKQAL+MKKRPV+A+GR+N+VTGVAKTIK HF+KH
Sbjct: 883  RPVDTRSNEMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKH 942

Query: 571  PLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVSQEPNKVILYRGWIEGEE 422
            PLAIVNVKGRAKGTS+QEV+FKLEQATGAV+VSQEP+KVILYRGW   EE
Sbjct: 943  PLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSKVILYRGWGAREE 992


>ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 1062

 Score = 1009 bits (2609), Expect = 0.0
 Identities = 569/1028 (55%), Positives = 697/1028 (67%), Gaps = 53/1028 (5%)
 Frame = -3

Query: 3229 NSSSSTHTGNQNVSKTAIKRIAEKLRSLGYIEEDEHNSNQ-NPQPKT-IHGSAGEIFLPF 3056
            N  + + T  QN + +AI+RIA+KLRSLG +E+     +  NP+P+T    +AGEIF+P 
Sbjct: 51   NPLTQSETRVQNDTTSAIQRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPL 110

Query: 3055 SHQFPKHRVGHTIDSSWSTPENPVPEPGSGSVITRFHELKSEVEKQKGSPK------REE 2894
             H+ PK+RVGHTID SWSTPENP+P PG+G+ I R+++L  EV +QK   K      +E+
Sbjct: 111  PHRIPKYRVGHTIDDSWSTPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEK 170

Query: 2893 RVPTLAELTIPVEEXXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCED 2714
             VPTLAEL +  +E              L +GKAGITEGIVNGIHERWR +EVVKI CED
Sbjct: 171  EVPTLAELKLSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCED 230

Query: 2713 LSRMNMKRTHDLLERKTGGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXXXDELSSE 2534
            L R+NMKRTHD LERKTGGLV+WRSGS IILYRGA+YKYPYFL           D+L ++
Sbjct: 231  LCRLNMKRTHDSLERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQ 290

Query: 2533 FSMVNRVDSRKDLS---------------------LVNGVGSPSRVRFQLPGEAQLAEEA 2417
                  +D  K  S                     L++ VGSP ++R+QLPGEA+L EEA
Sbjct: 291  LVDDEGLDETKTHSSGADSAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEA 350

Query: 2416 DRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRL 2237
            DRLLDGLGPRFTDWWGYDP PVDADLLSA VPGYRRPFRLLPYGV+PKLT+DEMTTLRRL
Sbjct: 351  DRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRL 410

Query: 2236 SRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGT 2057
             RPLP HFALGRN+NLQGLAA++VKLWEKCEIAK+AVKRG QNTNSEMMA ELKRLTGGT
Sbjct: 411  GRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGT 470

Query: 2056 LISRDSDFIAFYRGKDFLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSELELRTNEP 1877
            L+SRD +FI FYRGKDFLPPA S AIEERRKH         + + S  +K E EL     
Sbjct: 471  LLSRDREFIVFYRGKDFLPPAASCAIEERRKH---------EFSTSNDSKEEPELGNRHD 521

Query: 1876 ASVDELQE----TNDQNKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELE 1709
             S D  Q+    TNDQ K  +  EQ++ RS ++A++R N +LS ALE+KA+AE++LAELE
Sbjct: 522  NSGDNTQDEFGCTNDQ-KSTMHSEQKERRSAEVAIRRTNIRLSRALEKKAEAEKLLAELE 580

Query: 1708 KVAEPQKPEIDREGITEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVK 1529
            +   P++ E+D+EGITEEERYML+KVGL MK ++ MGRRGVFDGTVENMHLHWK+RELVK
Sbjct: 581  E-ETPEQYEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVK 639

Query: 1528 LISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNK 1349
            +IS  R IE     AR LE ESGGILVAVERVN+ YAII++RGKNYERP  LRP+TLL K
Sbjct: 640  IISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTK 699

Query: 1348 KQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETSD 1169
            ++AMK S+EAQRR+SLKLHVL+LT+NI++LKLQL+KD    +L    +   P  K E  D
Sbjct: 700  REAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEIGD 759

Query: 1168 -QPGFVEYSHNQDNAGSEAFANDQEDMEWCGNDSTPLDLNDCMDASSYSKETIRSEKPMN 992
             QP     S        +A          CG D T  + ND  DA+      I+ +K   
Sbjct: 760  MQPAECMRSDTSHEVNVQARGE-------CGADLTSTESNDTGDATIDGPPAIQQDKQTE 812

Query: 991  PFSHHDESA-ETELKSSFKSALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQDTAEPHIY 815
              +H+  S  E E KSS KS  KE+  N   D   +     ++S P NS      EP   
Sbjct: 813  SLTHNGISINEIESKSSLKSVSKESQLNMIADFFAEGVASGTSSCPDNSMCSSDNEPRES 872

Query: 814  ANEFIESSNKLNKRKIESPLDIDDVEKGSIVPFG-----------AAPLSNRDRLVLRKQ 668
            + E  +S +  N+  IE   ++     G   P G           A  LSNRDRL+LRKQ
Sbjct: 873  SIESAKSRSSENE-PIEQSFELAKGRSGLSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQ 931

Query: 667  ALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATG 488
            AL+MKKRPVLA+GR+N+VTGVAK IK HF+K+PLAIVNVKGRAKGTS+QEVV KLE+ATG
Sbjct: 932  ALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATG 991

Query: 487  AVMVSQEPNKVILYRGW-IEGEEPHGVKEKIKARTSTQEMVSP------QLIEAIRLECG 329
            AV+VSQEP+KVILYRGW  E E     ++  +A+ S    V P      +L+ AI+LECG
Sbjct: 992  AVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKPSIVRDVRPWPAVSRELLAAIKLECG 1051

Query: 328  LQSRKEEE 305
            LQ ++E+E
Sbjct: 1052 LQGQQEQE 1059


>ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568857850|ref|XP_006482477.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 1076

 Score = 1001 bits (2589), Expect = 0.0
 Identities = 572/1041 (54%), Positives = 699/1041 (67%), Gaps = 66/1041 (6%)
 Frame = -3

Query: 3229 NSSSSTHTGNQNVSKTAIKRIAEKLRSLGYIEEDEHNSNQ-NPQPKT-IHGSAGEIFLPF 3056
            N  + + T  QN + +AI+RIA+KLRSLG +E+     +  NP+P+T    +AGEIF+P 
Sbjct: 51   NPLTQSETRVQNDTTSAIQRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPL 110

Query: 3055 SHQFPKHRVGHTIDSSWSTPENPVPEPGSGSVITRFHELKSEVEKQKGSPK------REE 2894
             H+ PK+RVGHTID SWSTPENP+P PG+G+ I R+++L  EV +QK   K      +E+
Sbjct: 111  PHRIPKYRVGHTIDDSWSTPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEK 170

Query: 2893 RVPTLAELTIPVEEXXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCED 2714
             VPTLAEL +  +E              L +GKAGITEGIVNGIHERWR +EVVKI CED
Sbjct: 171  EVPTLAELKLSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCED 230

Query: 2713 LSRMNMKRTHDLLERKTGGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXXXDELSSE 2534
            L R+NMKRTHD LERKTGGLV+WRSGS IILYRGA+YKYPYFL           D+L ++
Sbjct: 231  LCRLNMKRTHDSLERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQ 290

Query: 2533 FSMVNRVDSRKDLS---------------------LVNGVGSPSRVRFQLPGEAQLAEEA 2417
                  +D  K  S                     L++ VGSP ++R+QLPGEA+L EEA
Sbjct: 291  LVDDEGLDETKTHSSGADSAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEA 350

Query: 2416 DRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRL 2237
            DRLLDGLGPRFTDWWGYDP PVDADLLSA VPGYRRPFRLLPYGV+PKLT+DEMTTLRRL
Sbjct: 351  DRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRL 410

Query: 2236 SRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGT 2057
             RPLP HFALGRN+NLQGLAA++VKLWEKCEIAK+AVKRG QNTNSEMMA ELKRLTGGT
Sbjct: 411  GRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGT 470

Query: 2056 LISRDSDFIAFYRGKDFLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSELELRTNEP 1877
            L+SRD +FI FYRGKDFLPPA S AIEERRKH         + + S  +K E EL     
Sbjct: 471  LLSRDREFIVFYRGKDFLPPAASCAIEERRKH---------EFSTSNDSKEEPELGNRHD 521

Query: 1876 ASVDELQE----TNDQNKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELE 1709
             S D  Q+    TNDQ K  +  EQ++ RS ++A++R N +LS ALE+KA+AE++LAELE
Sbjct: 522  NSGDNTQDEFGCTNDQ-KSTMHSEQKERRSAEVAIRRTNIRLSRALEKKAEAEKLLAELE 580

Query: 1708 KVAEPQKPEIDREGITEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVK 1529
            +   P++ E+D+EGITEEERYML+KVGL MK ++ MGRRGVFDGTVENMHLHWK+RELVK
Sbjct: 581  E-ETPEQYEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVK 639

Query: 1528 LISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNK 1349
            +IS  R IE     AR LE ESGGILVAVERVN+ YAII++RGKNYERP  LRP+TLL K
Sbjct: 640  IISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTK 699

Query: 1348 KQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETSD 1169
            ++AMK S+EAQRR+SLKLHVL+LT+NI++LKLQL+KD    +L    +   P  K E  D
Sbjct: 700  REAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEIGD 759

Query: 1168 -QPGFVEYSHNQDNAGSEAFANDQEDMEWCGNDSTPLDLNDCMDASSYSKETIRSEKPMN 992
             QP     S        +A          CG D T  + ND  DA+      I+ +K   
Sbjct: 760  MQPAECMRSDTSHEVNVQARGE-------CGADLTSTESNDTGDATIDGPPAIQQDKQTE 812

Query: 991  PFSHHDESA-ETELKSSFKSALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQ-------D 836
              +H+  S  E E KSS KS  KE+  N   D   +     ++S P NS  +        
Sbjct: 813  SLTHNGISINEIESKSSLKSVSKESQLNMIADFFAEGVASGTSSCPDNSMQEVMEYNTIV 872

Query: 835  TAEPHIYANEFIESSNKLNKRK------IESPLDIDDVEKGSIVPFG-----------AA 707
             AE     NE  ESS +  K +      IE   ++     G   P G           A 
Sbjct: 873  DAEQCSSDNEPRESSIESAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNSRAI 932

Query: 706  PLSNRDRLVLRKQALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTS 527
             LSNRDRL+LRKQAL+MKKRPVLA+GR+N+VTGVAK IK HF+K+PLAIVNVKGRAKGTS
Sbjct: 933  QLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTS 992

Query: 526  IQEVVFKLEQATGAVMVSQEPNKVILYRGW-IEGEEPHGVKEKIKARTSTQEMVSP---- 362
            +QEVV KLE+ATGAV+VSQEP+KVILYRGW  E E     ++  +A+ S    V P    
Sbjct: 993  VQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKPSIVRDVRPWPAV 1052

Query: 361  --QLIEAIRLECGLQSRKEEE 305
              +L+ AI+LECGLQ ++E+E
Sbjct: 1053 SRELLAAIKLECGLQGQQEQE 1073


>ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Citrus sinensis]
          Length = 1050

 Score =  993 bits (2568), Expect = 0.0
 Identities = 564/1024 (55%), Positives = 700/1024 (68%), Gaps = 49/1024 (4%)
 Frame = -3

Query: 3229 NSSSSTHTGNQNVSKTAIKRIAEKLRSLGYIEEDEHNSNQ-NPQPKT-IHGSAGEIFLPF 3056
            N  + + T  QN + +AI+RIA+KLRSLG +E+     +  NP+P+T    +AGEIF+P 
Sbjct: 51   NPLTQSETRVQNDTTSAIQRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPL 110

Query: 3055 SHQFPKHRVGHTIDSSWSTPENPVPEPGSGSVITRFHELKSEVEKQKGSPK------REE 2894
             H+ PK+RVGHTID SWSTPENP+P PG+G+ I R+++L  EV +QK   K      +E+
Sbjct: 111  PHRIPKYRVGHTIDDSWSTPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEK 170

Query: 2893 RVPTLAELTIPVEEXXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCED 2714
             VPTLAEL +  +E              L +GKAGITEGIVNGIHERWR +EVVKI CED
Sbjct: 171  EVPTLAELKLSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCED 230

Query: 2713 LSRMNMKRTHDLLERKTGGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXXXDELSSE 2534
            L R+NMKRTHD LERKTGGLV+WRSGS IILYRGA+YKYPYFL           D+L ++
Sbjct: 231  LCRLNMKRTHDSLERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQ 290

Query: 2533 FSMVNRVDSRKDLS---------------------LVNGVGSPSRVRFQLPGEAQLAEEA 2417
                  +D  K  S                     L++ VGSP ++R+QLPGEA+L EEA
Sbjct: 291  LVDDEGLDETKTHSSGADSAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEA 350

Query: 2416 DRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRL 2237
            DRLLDGLGPRFTDWWGYDP PVDADLLSA VPGYRRPFRLLPYGV+PKLT+DEMTTLRRL
Sbjct: 351  DRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRL 410

Query: 2236 SRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGT 2057
             RPLP HFALGRN+NLQGLAA++VKLWEKCEIAK+AVKRG QNTNSEMMA ELKRLTGGT
Sbjct: 411  GRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGT 470

Query: 2056 LISRDSDFIAFYRGKDFLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSELELRTNEP 1877
            L+SRD +FI FYRGKDFLPPA S AIEERRKH         + + S  +K E EL     
Sbjct: 471  LLSRDREFIVFYRGKDFLPPAASCAIEERRKH---------EFSTSNDSKEEPELGNRHD 521

Query: 1876 ASVDELQE----TNDQNKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELE 1709
             S D  Q+    TNDQ K  +  EQ++ RS ++A++R N +LS ALE+KA+AE++LAELE
Sbjct: 522  NSGDNTQDEFGCTNDQ-KSTMHSEQKERRSAEVAIRRTNIRLSRALEKKAEAEKLLAELE 580

Query: 1708 KVAEPQKPEIDREGITEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVK 1529
            +   P++ E+D+EGITEEERYML+KVGL MK ++ MGRRGVFDGTVENMHLHWK+RELVK
Sbjct: 581  E-ETPEQYEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVK 639

Query: 1528 LISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNK 1349
            +IS  R IE     AR LE ESGGILVAVERVN+ YAII++RGKNYERP  LRP+TLL K
Sbjct: 640  IISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTK 699

Query: 1348 KQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETSD 1169
            ++AMK S+EAQRR+SLKLHVL+LT+NI++LKLQL+KD    +L    +   P  K E  D
Sbjct: 700  REAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEIGD 759

Query: 1168 -QPGFVEYSHNQDNAGSEAFANDQEDMEWCGNDSTPLDLNDCMDASSYSKETIRSEKPMN 992
             QP     S        +A          CG D T  + ND  DA+      I+ +K   
Sbjct: 760  MQPAECMRSDTSHEVNVQARGE-------CGADLTSTESNDTGDATIDGPPAIQQDKQTE 812

Query: 991  PFSHHD---ESAETELKSSFKSALKET-HSNTFLDEMGDRDDDYSTSLPMNSTSQDTAEP 824
              +H+D   E   +   S   ++++E    NT +D      +  S+      +S ++A+ 
Sbjct: 813  SLTHNDFFAEGVASGTSSCPDNSMQEVMEYNTIVDA-----EQCSSDNEPRESSIESAKS 867

Query: 823  HIYANEFIESSNKLNKRK--IESPLDIDDV--EKGSIVPFGAAPLSNRDRLVLRKQALKM 656
                NE IE S +L K +  + +P+   +V  E  S     A  LSNRDRL+LRKQAL+M
Sbjct: 868  RSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNS----RAIQLSNRDRLLLRKQALRM 923

Query: 655  KKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVMV 476
            KKRPVLA+GR+N+VTGVAK IK HF+K+PLAIVNVKGRAKGTS+QEVV KLE+ATGAV+V
Sbjct: 924  KKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLV 983

Query: 475  SQEPNKVILYRGW-IEGEEPHGVKEKIKARTSTQEMVSP------QLIEAIRLECGLQSR 317
            SQEP+KVILYRGW  E E     ++  +A+ S    V P      +L+ AI+LECGLQ +
Sbjct: 984  SQEPSKVILYRGWGAEDESSPRGRQNSRAKPSIVRDVRPWPAVSRELLAAIKLECGLQGQ 1043

Query: 316  KEEE 305
            +E+E
Sbjct: 1044 QEQE 1047


>ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Citrus sinensis]
          Length = 1045

 Score =  991 bits (2563), Expect = 0.0
 Identities = 563/1021 (55%), Positives = 700/1021 (68%), Gaps = 46/1021 (4%)
 Frame = -3

Query: 3229 NSSSSTHTGNQNVSKTAIKRIAEKLRSLGYIEEDEHNSNQ-NPQPKT-IHGSAGEIFLPF 3056
            N  + + T  QN + +AI+RIA+KLRSLG +E+     +  NP+P+T    +AGEIF+P 
Sbjct: 51   NPLTQSETRVQNDTTSAIQRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPL 110

Query: 3055 SHQFPKHRVGHTIDSSWSTPENPVPEPGSGSVITRFHELKSEVEKQKGSPK------REE 2894
             H+ PK+RVGHTID SWSTPENP+P PG+G+ I R+++L  EV +QK   K      +E+
Sbjct: 111  PHRIPKYRVGHTIDDSWSTPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEK 170

Query: 2893 RVPTLAELTIPVEEXXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCED 2714
             VPTLAEL +  +E              L +GKAGITEGIVNGIHERWR +EVVKI CED
Sbjct: 171  EVPTLAELKLSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCED 230

Query: 2713 LSRMNMKRTHDLLERKTGGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXXXDELSSE 2534
            L R+NMKRTHD LERKTGGLV+WRSGS IILYRGA+YKYPYFL           D+L ++
Sbjct: 231  LCRLNMKRTHDSLERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQ 290

Query: 2533 FSMVNRVDSRKDLS---------------------LVNGVGSPSRVRFQLPGEAQLAEEA 2417
                  +D  K  S                     L++ VGSP ++R+QLPGEA+L EEA
Sbjct: 291  LVDDEGLDETKTHSSGADSAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEA 350

Query: 2416 DRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRL 2237
            DRLLDGLGPRFTDWWGYDP PVDADLLSA VPGYRRPFRLLPYGV+PKLT+DEMTTLRRL
Sbjct: 351  DRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRL 410

Query: 2236 SRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGT 2057
             RPLP HFALGRN+NLQGLAA++VKLWEKCEIAK+AVKRG QNTNSEMMA ELKRLTGGT
Sbjct: 411  GRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGT 470

Query: 2056 LISRDSDFIAFYRGKDFLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSELELRTNEP 1877
            L+SRD +FI FYRGKDFLPPA S AIEERRKH         + + S  +K E EL     
Sbjct: 471  LLSRDREFIVFYRGKDFLPPAASCAIEERRKH---------EFSTSNDSKEEPELGNRHD 521

Query: 1876 ASVDELQE----TNDQNKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELE 1709
             S D  Q+    TNDQ K  +  EQ++ RS ++A++R N +LS ALE+KA+AE++LAELE
Sbjct: 522  NSGDNTQDEFGCTNDQ-KSTMHSEQKERRSAEVAIRRTNIRLSRALEKKAEAEKLLAELE 580

Query: 1708 KVAEPQKPEIDREGITEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVK 1529
            +   P++ E+D+EGITEEERYML+KVGL MK ++ MGRRGVFDGTVENMHLHWK+RELVK
Sbjct: 581  E-ETPEQYEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVK 639

Query: 1528 LISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNK 1349
            +IS  R IE     AR LE ESGGILVAVERVN+ YAII++RGKNYERP  LRP+TLL K
Sbjct: 640  IISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTK 699

Query: 1348 KQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETSD 1169
            ++AMK S+EAQRR+SLKLHVL+LT+NI++LKLQL+KD    +L    +   P  K E  D
Sbjct: 700  REAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEIGD 759

Query: 1168 -QPGFVEYSHNQDNAGSEAFANDQEDMEWCGNDSTPLDLNDCMDASSYSKETIRSEKPMN 992
             QP     S        +A          CG D T  + ND  DA+      I+ +K   
Sbjct: 760  MQPAECMRSDTSHEVNVQARGE-------CGADLTSTESNDTGDATIDGPPAIQQDKQTE 812

Query: 991  PFSHHDESAETELKSSFKSALKET-HSNTFLDEMGDRDDDYSTSLPMNSTSQDTAEPHIY 815
              +H+  ++ T   S   ++++E    NT +D      +  S+      +S ++A+    
Sbjct: 813  SLTHNGVASGT--SSCPDNSMQEVMEYNTIVDA-----EQCSSDNEPRESSIESAKSRSS 865

Query: 814  ANEFIESSNKLNKRK--IESPLDIDDV--EKGSIVPFGAAPLSNRDRLVLRKQALKMKKR 647
             NE IE S +L K +  + +P+   +V  E  S     A  LSNRDRL+LRKQAL+MKKR
Sbjct: 866  ENEPIEQSFELAKGRSGLSTPIGTGNVWNENNS----RAIQLSNRDRLLLRKQALRMKKR 921

Query: 646  PVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVSQE 467
            PVLA+GR+N+VTGVAK IK HF+K+PLAIVNVKGRAKGTS+QEVV KLE+ATGAV+VSQE
Sbjct: 922  PVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQE 981

Query: 466  PNKVILYRGW-IEGEEPHGVKEKIKARTSTQEMVSP------QLIEAIRLECGLQSRKEE 308
            P+KVILYRGW  E E     ++  +A+ S    V P      +L+ AI+LECGLQ ++E+
Sbjct: 982  PSKVILYRGWGAEDESSPRGRQNSRAKPSIVRDVRPWPAVSRELLAAIKLECGLQGQQEQ 1041

Query: 307  E 305
            E
Sbjct: 1042 E 1042


>ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citrus clementina]
            gi|557533064|gb|ESR44247.1| hypothetical protein
            CICLE_v10013715mg [Citrus clementina]
          Length = 1062

 Score =  991 bits (2563), Expect = 0.0
 Identities = 564/1034 (54%), Positives = 694/1034 (67%), Gaps = 59/1034 (5%)
 Frame = -3

Query: 3229 NSSSSTHTGNQNVSKTAIKRIAEKLRSLGYIEEDEHNSNQ-NPQPKT-IHGSAGEIFLPF 3056
            N  + + T  QN + +AI+RIA+KLRSLG +E+     +  NP+P+T    +AGEIF+P 
Sbjct: 51   NPLTQSETRVQNDTTSAIQRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPL 110

Query: 3055 SHQFPKHRVGHTIDSSWSTPENPVPEPGSGSVITRFHELKSEVEKQKGSPK------REE 2894
             H+ PK+RVGHTID SWSTPENPVP PG+G+ I R+++L  EV +QK   K      +E+
Sbjct: 111  PHRIPKYRVGHTIDDSWSTPENPVPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEK 170

Query: 2893 RVPTLAELTIPVEEXXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCED 2714
             VPTLAEL +  +E              L +GKAGITEGIVNGIHERWR +EVVKI CED
Sbjct: 171  EVPTLAELKLSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCED 230

Query: 2713 LSRMNMKRTHDLLERKTGGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXXXDELSSE 2534
            L R+NMKRTHD LERKTGGLV+WRSGS IILYRGA+YKYPYFL           D+L ++
Sbjct: 231  LCRLNMKRTHDSLERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQ 290

Query: 2533 FSMVNRVDSRKDLS---------------------LVNGVGSPSRVRFQLPGEAQLAEEA 2417
                  +D  K  S                     L++ VGSP ++R+QLPGEA+L EEA
Sbjct: 291  LVDDEGLDETKTHSSGADSAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEA 350

Query: 2416 DRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRL 2237
            DRLLDGLGPRFTDWWGYDP PVDADLL A VPGYRRPFRLLPYGV+PKLT+DEMTTLRRL
Sbjct: 351  DRLLDGLGPRFTDWWGYDPQPVDADLLPATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRL 410

Query: 2236 SRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGT 2057
             RPLP HFALGRN+NLQGLAA++VKLWEKCEIAK+AVKRG QNTNSEMMA ELKRLTGGT
Sbjct: 411  GRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGT 470

Query: 2056 LISRDSDFIAFYRGKDFLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSELELRTNEP 1877
            L+SRD +FI FYRGKDFLPPA S+AIEERRKH           + S  +K E EL     
Sbjct: 471  LLSRDREFIVFYRGKDFLPPAASSAIEERRKHEF---------STSNDSKEEPELGNRHD 521

Query: 1876 ASVDELQE----TNDQNKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELE 1709
             S D  Q+    TNDQ    +  EQ++ RS ++A++R + +LS ALE+KA+AE++LAELE
Sbjct: 522  NSGDNTQDEFGCTNDQTST-MHSEQKERRSAEVAIRRTSIRLSRALEKKAEAEKLLAELE 580

Query: 1708 KVAEPQKPEIDREGITEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVK 1529
            +   P++ E+D+EGITEEERYML+KVGL MK ++ MGRRGVFDGTVENMHLHWK+RELVK
Sbjct: 581  E-ERPEQYEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVK 639

Query: 1528 LISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNK 1349
            +IS  R IE     AR LE ESGGILVAVERVN+ YAII++RGKNYERP  LRP+TLL K
Sbjct: 640  IISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTK 699

Query: 1348 KQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETSD 1169
            ++AMK S+EAQRR+SLKLHVL+LT+NI++LKLQL+KD    +L             ET D
Sbjct: 700  REAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSL-------------ETID 746

Query: 1168 QP-----GFVEYSH--NQDNAGSEAFANDQEDMEWCGNDSTPLDLNDCMDASSYSKETIR 1010
            +      G + +       N     F    +    CG D T  + ND  DA+      I+
Sbjct: 747  ESILPLVGSIIFLMIWKSSNIPEIVFGIFFKARGECGADLTSTESNDTGDATIDGPPAIQ 806

Query: 1009 SEKPMNPFSHHDESA-ETELKSSFKSALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQDT 833
             +K     +H+  S  E E +SS KS  KE+  N   D   +     + S P NS     
Sbjct: 807  QDKQTESLTHNGISFNEIESESSLKSVSKESQLNMIADFFAEGVASGTPSCPDNSMCSSD 866

Query: 832  AEPHIYANEFIESSNKLNKRKIESPLDIDDVEKGSIVPFG-----------AAPLSNRDR 686
             EP   + E  +S +  N+  IE   ++     G   P G           A  LSNRDR
Sbjct: 867  NEPRESSIESAKSRSSENE-PIEQCFELAKGRSGLSTPIGTGNVWNENNSRAIQLSNRDR 925

Query: 685  LVLRKQALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFK 506
            L+LRKQAL+MKKRPVLA+GR+N+VTGVAK IK HF+K+PLAIVNVKGRAKGTS+QEVV K
Sbjct: 926  LLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAK 985

Query: 505  LEQATGAVMVSQEPNKVILYRGW-IEGEEPHGVKEKIKARTSTQEMVSP------QLIEA 347
            LE+ATGAV+VSQEP+KVILYRGW  E E     ++  +A+ S    V P      +L+ A
Sbjct: 986  LEEATGAVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKLSIVRDVRPWPAVSRELLAA 1045

Query: 346  IRLECGLQSRKEEE 305
            I+LECGLQ ++E+E
Sbjct: 1046 IKLECGLQGQQEQE 1059


>ref|XP_007031356.1| CRM family member 2, putative isoform 2 [Theobroma cacao]
            gi|508710385|gb|EOY02282.1| CRM family member 2, putative
            isoform 2 [Theobroma cacao]
          Length = 1045

 Score =  990 bits (2560), Expect = 0.0
 Identities = 561/1027 (54%), Positives = 711/1027 (69%), Gaps = 44/1027 (4%)
 Frame = -3

Query: 3253 NFRSWLVCNSSSSTHTGNQNVSKTAIKRIAEKLRSLGYIEEDEHNSNQNPQPKTIHGSA- 3077
            N R  +    SS   TGNQ + ++AI+RIA+KLRSLG+ E       QNP+P++  GS  
Sbjct: 37   NSRKEIFVIRSSIKRTGNQTLPQSAIQRIADKLRSLGFSE------TQNPEPESEPGSGS 90

Query: 3076 ---GEIFLPFSHQFPKHRVGHTIDSSWSTPENPVPEPGSG--SVITRFHELKSEVEKQKG 2912
               GEIF+P   + PK+RVGHTID+SWSTPENPVP+PGSG  S++ RF E+K E  ++ G
Sbjct: 91   DSPGEIFVPLPEKIPKYRVGHTIDTSWSTPENPVPDPGSGPGSLMARFREMKRE-RRKVG 149

Query: 2911 SPKREER-VPTLAELTIPVEEXXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEV 2735
              K E+R VP+LAEL +   E              L +GKAGITEGIVNGIHERWRRSEV
Sbjct: 150  RVKEEDRAVPSLAELKLSAAELRRLRTVGIGEKRKLKLGKAGITEGIVNGIHERWRRSEV 209

Query: 2734 VKIRCEDLSRMNMKRTHDLLERKTGGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXX 2555
            VKI CED+ +MNMKRTH++LERKTGGLV+WRSGS IILYRGANY+YPYFL          
Sbjct: 210  VKIVCEDICKMNMKRTHEVLERKTGGLVVWRSGSKIILYRGANYRYPYFLADKIATDDTS 269

Query: 2554 XD----------ELSSEFSMVNRVDSRKDL-----------SLVNGVGSPSRVRFQLPGE 2438
             +          EL    S  + ++S K              +V GVGSPSRVRFQLPGE
Sbjct: 270  SNASPDTNMDNVELHETESCSSEINSAKTAIPNATNKMTKPMIVQGVGSPSRVRFQLPGE 329

Query: 2437 AQLAEEADRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDE 2258
            A+L EEA+ LLDGLGPRFTDWWGY+P+PVD DLL A +PGYRRPFRLLPYGVKP LT+DE
Sbjct: 330  AELVEEANHLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKPILTNDE 389

Query: 2257 MTTLRRLSRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADEL 2078
            MTTLRRL RPLP HF LGRN+ LQGLAAS+VK WEKCEIAKVAVKRGVQNTNSE+MA+EL
Sbjct: 390  MTTLRRLGRPLPCHFVLGRNRKLQGLAASIVKHWEKCEIAKVAVKRGVQNTNSELMAEEL 449

Query: 2077 KRLTGGTLISRDSDFIAFYRGKDFLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSEL 1898
            K LTGGTL+SRD DFI  YRGKDFLP AVS+AIEERR+H +H EK   + + S  T  E+
Sbjct: 450  KWLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRRHVIHVEKQGAECSKSKKTAQEV 509

Query: 1897 ELRTNEPASVDELQETNDQNKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILA 1718
             +   +  S  ++    DQ +     + + ++S + A+++ + KLSMALE+KAKAE++LA
Sbjct: 510  IVEDTKSGSESKINSAKDQ-RSNFFGDPKNMKSAEAAIRKTDVKLSMALEKKAKAEKLLA 568

Query: 1717 ELEKVAEPQKPEIDREGITEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRE 1538
            ELE+   PQ+ EID+EGIT+EERYML+KVGL MKP++ +GRRGVFDGTVENMHLHWKYRE
Sbjct: 569  ELEQAEIPQQSEIDKEGITQEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRE 628

Query: 1537 LVKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTL 1358
            LVK+IS +  +E VH  AR LEAESGGILVAVERV++ YAIIV+RGKNYERP +LRP+TL
Sbjct: 629  LVKIISKETNVEAVHQLARMLEAESGGILVAVERVSKGYAIIVYRGKNYERPTSLRPQTL 688

Query: 1357 LNKKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLI--KDDTQMNLVQSTKHKRPNTK 1184
            L K+QAMK S+E QRR+SLKLH+L LT+N++ L+ QL+  K+   M  V+ +       +
Sbjct: 689  LTKRQAMKRSLEEQRRKSLKLHILNLTRNVNDLEHQLVVDKEANSMQTVEQSSLPLVQEE 748

Query: 1183 FETSDQPGFVEYSHN----QDNAGSEAFANDQEDMEWCGNDSTPLDLNDCMDASSYSKET 1016
             ET      VEY+ +      ++G    + D++     G++ST +  ND M A+   ++ 
Sbjct: 749  LETLQS---VEYTGSVIECPASSGGHVESRDKD-----GSESTSMK-NDKMVATISIRQP 799

Query: 1015 IRSEKPMNPFSHHD--ESAETELKSSFKSALKETHSNTFLDEMGDRDDDYSTSLPMNSTS 842
             + E  M P S HD  E+ +TE + S +S  +++H+ T L  +  + +   TS P N   
Sbjct: 800  SKQEF-MEPSSIHDGFENHKTESEFSAESVNRKSHA-TELRALHTQVEMVDTSYPDNLME 857

Query: 841  QDTAEPHIYANEFIESSNKLNKRKIESPLDIDDVEKGSI------VPFGAAPLSNRDRLV 680
            +      I A   + S+N   +  +ES   +D     ++      +   A  LSN+DRL+
Sbjct: 858  EIDDSGAINAEHGV-SNNGPMESLVESASMLDVSISSAVENVSNKMASTANFLSNKDRLL 916

Query: 679  LRKQALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLE 500
            LRKQALKMKKRPVLA+GR+N+VTGVAK I+ HF+KHPLAIVNVKGRAKGTS+QEVV KL+
Sbjct: 917  LRKQALKMKKRPVLAVGRSNIVTGVAKAIRAHFQKHPLAIVNVKGRAKGTSVQEVVLKLQ 976

Query: 499  QATGAVMVSQEPNKVILYRGWIEGEE-PHGVKEKIK-ARTSTQEMVSPQLIEAIRLECGL 326
            +ATGAV+VSQEP+KVILYRGW  G+E   G     K +    +  VSP+LI AIRLECGL
Sbjct: 977  EATGAVLVSQEPSKVILYRGWGAGDELGRGDNRNAKDSLAQNRPAVSPELIAAIRLECGL 1036

Query: 325  QSRKEEE 305
            Q ++EEE
Sbjct: 1037 QLQQEEE 1043


>gb|EXC45069.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 966

 Score =  989 bits (2557), Expect = 0.0
 Identities = 552/999 (55%), Positives = 673/999 (67%), Gaps = 31/999 (3%)
 Frame = -3

Query: 3220 SSTHTGNQNVSKTAIKRIAEKLRSLGYIEEDEHNSNQNPQPKTIHGSAGEIFLPFSHQFP 3041
            SS       + K+AI+RI+EKLRSLG+ +E       NP P+    SAGEIF+P  H+ P
Sbjct: 45   SSNADAQTLLPKSAIQRISEKLRSLGFTDE-------NPSPEPERSSAGEIFVPLPHRLP 97

Query: 3040 KHRVGHTIDSSWSTPENPVPEPGSGSVITRFHELKSEVEKQKGSPKRE---------ERV 2888
            K RVGHTID+SWS+PENPVPEPGSG+ I RF ELK+EV +Q+   ++E         ERV
Sbjct: 98   KQRVGHTIDASWSSPENPVPEPGSGTAIKRFRELKTEVRRQRREERKESAANAREERERV 157

Query: 2887 PTLAELTIPVEEXXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCEDLS 2708
            PTLAEL +P EE              + VGKAGITEGIVNGIHERWR+SEVVKI CED+ 
Sbjct: 158  PTLAELRLPPEELRRLRTLGIGLRKKVKVGKAGITEGIVNGIHERWRQSEVVKIECEDIC 217

Query: 2707 RMNMKRTHDLLERKTGGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXXXDELSSEFS 2528
            RMNMKRTHDLLE+KTGGLV+WRSGS I+LYRG  YKYPYF                    
Sbjct: 218  RMNMKRTHDLLEKKTGGLVVWRSGSKIVLYRGIKYKYPYFFVGKDASHTATLPVPDVGDE 277

Query: 2527 MVNRVDSRKDL-----------------SLVNGVGSPSRVRFQLPGEAQLAEEADRLLDG 2399
              N+ D+   +                 SL+ GVG P+RVRFQLPGEAQLAEEADRLLDG
Sbjct: 278  EQNKTDTSSSIDGVETVAPTPGNKLVQPSLIQGVGLPNRVRFQLPGEAQLAEEADRLLDG 337

Query: 2398 LGPRFTDWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPT 2219
            LGPRFTDWWGYDP PVDADLL   V GYRRPFRLLPYGV PKLTDDEMTTLRRL+RPLP 
Sbjct: 338  LGPRFTDWWGYDPQPVDADLLRPIVHGYRRPFRLLPYGVLPKLTDDEMTTLRRLARPLPC 397

Query: 2218 HFALGRNKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLISRDS 2039
            HFALGRN+NLQGLA+S+VKLWEKCE+AK+A+KRGVQNTNSEMMA+ELK LTGGTL++RD 
Sbjct: 398  HFALGRNRNLQGLASSVVKLWEKCEVAKIAIKRGVQNTNSEMMAEELKSLTGGTLLARDR 457

Query: 2038 DFIAFYRGKDFLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSELELRTNEPASVDEL 1859
            +FI  YRGKDFLP AVS+AIEERRK+ +  +K   +   S+  K+E +   +      EL
Sbjct: 458  EFIVLYRGKDFLPSAVSSAIEERRKYVIQAKKLKTEHQTSV--KTEQDQLGSVVCGASEL 515

Query: 1858 QETNDQNKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELEKVAEPQKPEI 1679
            +E N  +K++L  EQRK    + ++K  + KLSMALE+KAKAE++LAELEK    Q+PEI
Sbjct: 516  REING-HKKRLPSEQRKPSVAETSVKGTSIKLSMALEKKAKAEQLLAELEKAESRQQPEI 574

Query: 1678 DREGITEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIEN 1499
            D+EGIT+EERYML+K+GL MKP++ +GRRGVFDGT+ENMHLHWKYRELVK+IS+++ IE 
Sbjct: 575  DKEGITKEERYMLRKIGLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKVISNEKSIEA 634

Query: 1498 VHAAARRLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNKKQAMKLSIEA 1319
            VH  A+ LEAESGGILVAVER ++ YAIIV+RGKNYERP +LRP+TLL K+ AMK SIEA
Sbjct: 635  VHQVAQTLEAESGGILVAVERESKGYAIIVYRGKNYERPASLRPQTLLTKRAAMKRSIEA 694

Query: 1318 QRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETSDQPGFVEYSHN 1139
            QRR+SLKLHVLKLTKNID LKLQL+KD             +   K + +D+   +     
Sbjct: 695  QRRQSLKLHVLKLTKNIDDLKLQLVKD-------------KQRNKMQPADESSNLVRDEV 741

Query: 1138 QDNAGSEAFANDQEDMEWCGNDSTPLDLNDCMDASSYSKETIRSEKPMNPFSHHDESAET 959
                 +E+ + D E     G+ S P   ++ M     S   + ++        HD S E 
Sbjct: 742  NGIQSAESLSLDAEVKS--GSLSFPTTSHEEMSNGMNSSAAVGAQ--------HDVSDEE 791

Query: 958  ELKSSFKSALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQDTAEPHIYANEFIESSNKLN 779
            E++SS KS           D+ G        S+P                  + +   LN
Sbjct: 792  EVESSAKS-----------DKNG-----LEPSVP------------------VIADKGLN 817

Query: 778  KRKIESPLDIDDVEKGSIVPFGAAPLSNRDRLVLRKQALKMKKRPVLAIGRNNVVTGVAK 599
            +                 +P     LSNR+RL+LRKQALKMKKRPVLA+GRNN+V+GVAK
Sbjct: 818  E-----------------MPSRTIILSNRERLLLRKQALKMKKRPVLAVGRNNIVSGVAK 860

Query: 598  TIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVSQEPNKVILYRGWIEGE-E 422
             I  HF+K+PLAIVNVKGRAKGTS+QEVVF LEQATGAV+VSQEP+KVILYRGW  GE  
Sbjct: 861  AINAHFQKYPLAIVNVKGRAKGTSVQEVVFMLEQATGAVLVSQEPSKVILYRGWGAGESS 920

Query: 421  PHGVKEKI----KARTSTQEMVSPQLIEAIRLECGLQSR 317
             H VK+      +   S    VSP+L++AIR ECGLQ++
Sbjct: 921  DHSVKKNTTDARRKLESQPPAVSPELLDAIRTECGLQNQ 959


>ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X6 [Citrus sinensis]
          Length = 1031

 Score =  985 bits (2547), Expect = 0.0
 Identities = 558/1027 (54%), Positives = 685/1027 (66%), Gaps = 52/1027 (5%)
 Frame = -3

Query: 3229 NSSSSTHTGNQNVSKTAIKRIAEKLRSLGYIEEDEHNSNQ-NPQPKT-IHGSAGEIFLPF 3056
            N  + + T  QN + +AI+RIA+KLRSLG +E+     +  NP+P+T    +AGEIF+P 
Sbjct: 51   NPLTQSETRVQNDTTSAIQRIADKLRSLGIVEQTTSKDDTLNPEPETRATDNAGEIFIPL 110

Query: 3055 SHQFPKHRVGHTIDSSWSTPENPVPEPGSGSVITRFHELKSEVEKQKGSPK------REE 2894
             H+ PK+RVGHTID SWSTPENP+P PG+G+ I R+++L  EV +QK   K      +E+
Sbjct: 111  PHRIPKYRVGHTIDDSWSTPENPIPVPGTGAAIVRYNQLNKEVGRQKWLAKNSKMNEKEK 170

Query: 2893 RVPTLAELTIPVEEXXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCED 2714
             VPTLAEL +  +E              L +GKAGITEGIVNGIHERWR +EVVKI CED
Sbjct: 171  EVPTLAELKLSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCED 230

Query: 2713 LSRMNMKRTHDLLERKTGGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXXXDELSSE 2534
            L R+NMKRTHD LERKTGGLV+WRSGS IILYRGA+YKYPYFL           D+L ++
Sbjct: 231  LCRLNMKRTHDSLERKTGGLVVWRSGSKIILYRGADYKYPYFLADESSTDGASSDDLPNQ 290

Query: 2533 FSMVNRVDSRKDLS---------------------LVNGVGSPSRVRFQLPGEAQLAEEA 2417
                  +D  K  S                     L++ VGSP ++R+QLPGEA+L EEA
Sbjct: 291  LVDDEGLDETKTHSSGADSAKPSGQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEA 350

Query: 2416 DRLLDGLGPRFTDWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRL 2237
            DRLLDGLGPRFTDWWGYDP PVDADLLSA VPGYRRPFRLLPYGV+PKLT+DEMTTLRRL
Sbjct: 351  DRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRL 410

Query: 2236 SRPLPTHFALGRNKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGT 2057
             RPLP HFALGRN+NLQGLAA++VKLWEKCEIAK+AVKRG QNTNSEMMA ELKRLTGGT
Sbjct: 411  GRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGT 470

Query: 2056 LISRDSDFIAFYRGKDFLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSELELRTNEP 1877
            L+SRD +FI FYRGKDFLPPA S AIEERRKH         + + S  +K E EL     
Sbjct: 471  LLSRDREFIVFYRGKDFLPPAASCAIEERRKH---------EFSTSNDSKEEPELGNRHD 521

Query: 1876 ASVDELQE----TNDQNKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELE 1709
             S D  Q+    TNDQ K  +  EQ++ RS ++A++R N +LS ALE+KA+AE++LAELE
Sbjct: 522  NSGDNTQDEFGCTNDQ-KSTMHSEQKERRSAEVAIRRTNIRLSRALEKKAEAEKLLAELE 580

Query: 1708 KVAEPQKPEIDREGITEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVK 1529
            +   P++ E+D+EGITEEERYML+KVGL MK ++ MGRRGVFDGTVENMHLHWK+RELVK
Sbjct: 581  E-ETPEQYEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVK 639

Query: 1528 LISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNK 1349
            +IS  R IE     AR LE ESGGILVAVERVN+ YAII++RGKNYERP  LRP+TLL K
Sbjct: 640  IISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTK 699

Query: 1348 KQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETSD 1169
            ++AMK S+EAQRR+SLKLHVL+LT+NI++LKLQL+KD    +L    +   P  K E  D
Sbjct: 700  REAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEEIGD 759

Query: 1168 -QPGFVEYSHNQDNAGSEAFANDQEDMEWCGNDSTPLDLNDCMDASSYSKETIRSEKPMN 992
             QP     S        +A          CG D T  + ND  DA+      I+ +K   
Sbjct: 760  MQPAECMRSDTSHEVNVQARGE-------CGADLTSTESNDTGDATIDGPPAIQQDKQTE 812

Query: 991  PFSHHDESAETELKSSFKSALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQDTAEPHIYA 812
              +H+  ++ T                              +S P NS      EP   +
Sbjct: 813  SLTHNGVASGT------------------------------SSCPDNSMCSSDNEPRESS 842

Query: 811  NEFIESSNKLNKRKIESPLDIDDVEKGSIVPFG-----------AAPLSNRDRLVLRKQA 665
             E  +S +  N+  IE   ++     G   P G           A  LSNRDRL+LRKQA
Sbjct: 843  IESAKSRSSENE-PIEQSFELAKGRSGLSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQA 901

Query: 664  LKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGA 485
            L+MKKRPVLA+GR+N+VTGVAK IK HF+K+PLAIVNVKGRAKGTS+QEVV KLE+ATGA
Sbjct: 902  LRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGA 961

Query: 484  VMVSQEPNKVILYRGW-IEGEEPHGVKEKIKARTSTQEMVSP------QLIEAIRLECGL 326
            V+VSQEP+KVILYRGW  E E     ++  +A+ S    V P      +L+ AI+LECGL
Sbjct: 962  VLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKPSIVRDVRPWPAVSRELLAAIKLECGL 1021

Query: 325  QSRKEEE 305
            Q ++E+E
Sbjct: 1022 QGQQEQE 1028


>ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
            gi|223543418|gb|EEF44949.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1009

 Score =  973 bits (2514), Expect = 0.0
 Identities = 544/1021 (53%), Positives = 683/1021 (66%), Gaps = 47/1021 (4%)
 Frame = -3

Query: 3226 SSSSTHTGN-QNVSKTAIKRIAEKLRSLGYIEEDEHNSNQNPQPKTIHGSA-----GEIF 3065
            SS + H  N + V  +AI+RIA+KLRSLG+ E        NP+P T + +      GEIF
Sbjct: 39   SSITIHCSNSKTVPSSAIQRIADKLRSLGFAEH-------NPEPHTRNSAETKQREGEIF 91

Query: 3064 LPFSHQFPKHRVGHTIDSSWSTPENPVPEPGSGSVITRFHELKSEVEKQKGSPKREERVP 2885
            +P  ++  K+RVGHT+D SWSTPENPVP PGSG+ I R+HEL+ +V+K++   KRE +VP
Sbjct: 92   IPLPNELSKYRVGHTLDPSWSTPENPVPRPGSGNAILRYHELRKQVKKEREDKKREAKVP 151

Query: 2884 TLAELTIPVEEXXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCEDLSR 2705
            TLAEL++  EE              L VGKAGITEGIVNGIHERWRRSEVVKI CEDL R
Sbjct: 152  TLAELSLSEEELRRLRRIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCR 211

Query: 2704 MNMKRTHDLLERKTGGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXXXDELSS---- 2537
            MNMKRTHDLLERKTGGLV+WR+GS I+LYRG NY YPYFL           D +      
Sbjct: 212  MNMKRTHDLLERKTGGLVVWRAGSKIVLYRGVNYIYPYFLSDNTTENDTSIDAVQDTHKH 271

Query: 2536 ----------------EFSMVNRVDSRKDLSLVNGVGSPSRVRFQLPGEAQLAEEADRLL 2405
                            +FS  +  +     +L+ GVG P+RVRFQLPGEAQLAEE D LL
Sbjct: 272  NDSDKIKSCSSSVDGVKFSGPSPTNKAVRPALIQGVGLPNRVRFQLPGEAQLAEEVDSLL 331

Query: 2404 DGLGPRFTDWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRPL 2225
            +GLGPRF+DWWGY+P+PVDADLL A VPGY++PFRLLPYG+KP LT+DEMTTL+RL RPL
Sbjct: 332  EGLGPRFSDWWGYEPLPVDADLLPAIVPGYQKPFRLLPYGIKPILTNDEMTTLKRLGRPL 391

Query: 2224 PTHFALGRNKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLISR 2045
            P HF LGRN+ LQGLAAS++KLWEKCEIAK+AVKRGVQNTNSEMMA+ELKRLTGGTL+SR
Sbjct: 392  PCHFVLGRNRKLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKRLTGGTLLSR 451

Query: 2044 DSDFIAFYRGKDFLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSE---LELRTNEPA 1874
            D +FI  YRGKDFLP AVS+AI+ERR H  +  K   D + S  T  E   +E  T+   
Sbjct: 452  DREFIVLYRGKDFLPSAVSSAIKERRNHVFNVAKERTDNSTSAETAKEAEDVEDGTSNSG 511

Query: 1873 SVDELQETNDQNKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELEKVAEP 1694
            S DE    N+Q+    + +QRK+     A+KR + +LSMALE+KAKA ++LAE+E     
Sbjct: 512  SQDEFHGNNEQSYD--LSKQRKLSFTKEAIKRTSIRLSMALEKKAKAVKLLAEIENSEMS 569

Query: 1693 QKPEIDREGITEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVKLISSD 1514
            Q+PEID+EGIT+EERYML+KVGL MKP++ +GRRGVFDGT+ENMHLHWKYRELVK+I  +
Sbjct: 570  QQPEIDKEGITDEERYMLRKVGLKMKPFLLIGRRGVFDGTIENMHLHWKYRELVKIICKE 629

Query: 1513 RCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNKKQAMK 1334
            R +  VH  A+ LEAESGGILVAVERV++ YAI+V+RGKNY+RP  LRP TLL+K++AMK
Sbjct: 630  RSLNAVHEVAQSLEAESGGILVAVERVSKGYAIVVYRGKNYQRPALLRPPTLLSKREAMK 689

Query: 1333 LSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETSDQPGFV 1154
             S+EAQRRESLKLHVL+LT+NI+ LKL+L+                              
Sbjct: 690  RSLEAQRRESLKLHVLRLTRNINDLKLKLL------------------------------ 719

Query: 1153 EYSHNQDNAGSEAFANDQEDMEWCGNDSTPLDLNDCMDASSYSKETIRSEKPMNPFSHHD 974
                N +  G   F            +S  + L+    AS    +       +NP   +D
Sbjct: 720  ---FNGNGIGRSEF------------ESLSISLSKESHASVNIIQPDEQASQINPSLLYD 764

Query: 973  --ESAETELKSSFKSALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQD-------TAEPH 821
                 + E +SS +S  KETH++ F    G   D  STS P  S S++       +AE  
Sbjct: 765  GIRIGKNEPESSSESLSKETHASLFTAINGGAVD--STSFPNTSMSEERGSYPCVSAENC 822

Query: 820  IYANEFIESSNKLNKRKIESPLDIDDVEKGSIVPFGAAPLSNRDRLVLRKQALKMKKRPV 641
            ++ N+ + S+ +     +E  + I   E    +      LSNRDRL+LRKQALKMK RPV
Sbjct: 823  VHENKIMGSTVESTTTVLEESVSISANEDNE-MQSSTICLSNRDRLMLRKQALKMKNRPV 881

Query: 640  LAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVSQEPN 461
            LA+GR+N+VTGVAKTIK HFKK+PLAIVNVKGRAKGTS+QEVVF+LEQATG V+VSQEP+
Sbjct: 882  LAVGRSNIVTGVAKTIKAHFKKYPLAIVNVKGRAKGTSVQEVVFQLEQATGGVLVSQEPS 941

Query: 460  KVILYRGWIEGEEP---------HGVKEKIKARTSTQEMVSPQLIEAIRLECGLQSRKEE 308
            KVILYRGW   +EP            K  +    S++  +SP+L+ AIRLECGLQ+++E+
Sbjct: 942  KVILYRGWGAFDEPGHRGKKNAHDSGKTSVVKEESSRLGMSPELMAAIRLECGLQNKQEQ 1001

Query: 307  E 305
            +
Sbjct: 1002 K 1002


>ref|XP_007031355.1| CRM family member 2, putative isoform 1 [Theobroma cacao]
            gi|508710384|gb|EOY02281.1| CRM family member 2, putative
            isoform 1 [Theobroma cacao]
          Length = 1087

 Score =  970 bits (2507), Expect = 0.0
 Identities = 561/1069 (52%), Positives = 711/1069 (66%), Gaps = 86/1069 (8%)
 Frame = -3

Query: 3253 NFRSWLVCNSSSSTHTGNQNVSKTAIKRIAEKLRSLGYIEEDEHNSNQNPQPKTIHGSA- 3077
            N R  +    SS   TGNQ + ++AI+RIA+KLRSLG+ E       QNP+P++  GS  
Sbjct: 37   NSRKEIFVIRSSIKRTGNQTLPQSAIQRIADKLRSLGFSE------TQNPEPESEPGSGS 90

Query: 3076 ---GEIFLPFSHQFPKHRVGHTIDSSWSTPENPVPEPGSG--SVITRFHELKSEVEKQKG 2912
               GEIF+P   + PK+RVGHTID+SWSTPENPVP+PGSG  S++ RF E+K E  ++ G
Sbjct: 91   DSPGEIFVPLPEKIPKYRVGHTIDTSWSTPENPVPDPGSGPGSLMARFREMKRE-RRKVG 149

Query: 2911 SPKREER-VPTLAELTIPVEEXXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEV 2735
              K E+R VP+LAEL +   E              L +GKAGITEGIVNGIHERWRRSEV
Sbjct: 150  RVKEEDRAVPSLAELKLSAAELRRLRTVGIGEKRKLKLGKAGITEGIVNGIHERWRRSEV 209

Query: 2734 VKIRCEDLSRMNMKRTHDLLE--------------------------------------- 2672
            VKI CED+ +MNMKRTH++LE                                       
Sbjct: 210  VKIVCEDICKMNMKRTHEVLEVCSLIWLFSLLLELFFFIALSMIDEEMRLIKVGLWLKKK 269

Query: 2671 ---RKTGGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXXXD----------ELSSEF 2531
               RKTGGLV+WRSGS IILYRGANY+YPYFL           +          EL    
Sbjct: 270  LQMRKTGGLVVWRSGSKIILYRGANYRYPYFLADKIATDDTSSNASPDTNMDNVELHETE 329

Query: 2530 SMVNRVDSRKDL-----------SLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRF 2384
            S  + ++S K              +V GVGSPSRVRFQLPGEA+L EEA+ LLDGLGPRF
Sbjct: 330  SCSSEINSAKTAIPNATNKMTKPMIVQGVGSPSRVRFQLPGEAELVEEANHLLDGLGPRF 389

Query: 2383 TDWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALG 2204
            TDWWGY+P+PVD DLL A +PGYRRPFRLLPYGVKP LT+DEMTTLRRL RPLP HF LG
Sbjct: 390  TDWWGYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKPILTNDEMTTLRRLGRPLPCHFVLG 449

Query: 2203 RNKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLISRDSDFIAF 2024
            RN+ LQGLAAS+VK WEKCEIAKVAVKRGVQNTNSE+MA+ELK LTGGTL+SRD DFI  
Sbjct: 450  RNRKLQGLAASIVKHWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVL 509

Query: 2023 YRGKDFLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSELELRTNEPASVDELQETND 1844
            YRGKDFLP AVS+AIEERR+H +H EK   + + S  T  E+ +   +  S  ++    D
Sbjct: 510  YRGKDFLPSAVSSAIEERRRHVIHVEKQGAECSKSKKTAQEVIVEDTKSGSESKINSAKD 569

Query: 1843 QNKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGI 1664
            Q +     + + ++S + A+++ + KLSMALE+KAKAE++LAELE+   PQ+ EID+EGI
Sbjct: 570  Q-RSNFFGDPKNMKSAEAAIRKTDVKLSMALEKKAKAEKLLAELEQAEIPQQSEIDKEGI 628

Query: 1663 TEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAA 1484
            T+EERYML+KVGL MKP++ +GRRGVFDGTVENMHLHWKYRELVK+IS +  +E VH  A
Sbjct: 629  TQEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKETNVEAVHQLA 688

Query: 1483 RRLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNKKQAMKLSIEAQRRES 1304
            R LEAESGGILVAVERV++ YAIIV+RGKNYERP +LRP+TLL K+QAMK S+E QRR+S
Sbjct: 689  RMLEAESGGILVAVERVSKGYAIIVYRGKNYERPTSLRPQTLLTKRQAMKRSLEEQRRKS 748

Query: 1303 LKLHVLKLTKNIDQLKLQLI--KDDTQMNLVQSTKHKRPNTKFETSDQPGFVEYSHN--- 1139
            LKLH+L LT+N++ L+ QL+  K+   M  V+ +       + ET      VEY+ +   
Sbjct: 749  LKLHILNLTRNVNDLEHQLVVDKEANSMQTVEQSSLPLVQEELETLQS---VEYTGSVIE 805

Query: 1138 -QDNAGSEAFANDQEDMEWCGNDSTPLDLNDCMDASSYSKETIRSEKPMNPFSHHD--ES 968
               ++G    + D++     G++ST +  ND M A+   ++  + E  M P S HD  E+
Sbjct: 806  CPASSGGHVESRDKD-----GSESTSMK-NDKMVATISIRQPSKQEF-MEPSSIHDGFEN 858

Query: 967  AETELKSSFKSALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQDTAEPHIYANEFIESSN 788
             +TE + S +S  +++H+ T L  +  + +   TS P N   +      I A   + S+N
Sbjct: 859  HKTESEFSAESVNRKSHA-TELRALHTQVEMVDTSYPDNLMEEIDDSGAINAEHGV-SNN 916

Query: 787  KLNKRKIESPLDIDDVEKGSI------VPFGAAPLSNRDRLVLRKQALKMKKRPVLAIGR 626
               +  +ES   +D     ++      +   A  LSN+DRL+LRKQALKMKKRPVLA+GR
Sbjct: 917  GPMESLVESASMLDVSISSAVENVSNKMASTANFLSNKDRLLLRKQALKMKKRPVLAVGR 976

Query: 625  NNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVSQEPNKVILY 446
            +N+VTGVAK I+ HF+KHPLAIVNVKGRAKGTS+QEVV KL++ATGAV+VSQEP+KVILY
Sbjct: 977  SNIVTGVAKAIRAHFQKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAVLVSQEPSKVILY 1036

Query: 445  RGWIEGEE-PHGVKEKIK-ARTSTQEMVSPQLIEAIRLECGLQSRKEEE 305
            RGW  G+E   G     K +    +  VSP+LI AIRLECGLQ ++EEE
Sbjct: 1037 RGWGAGDELGRGDNRNAKDSLAQNRPAVSPELIAAIRLECGLQLQQEEE 1085


>ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1049

 Score =  965 bits (2494), Expect = 0.0
 Identities = 535/1015 (52%), Positives = 679/1015 (66%), Gaps = 42/1015 (4%)
 Frame = -3

Query: 3217 STHTGNQNVSKTAIKRIAEKLRSLGYIEEDEHNSNQNP--QPKTIHGSAGEIFLPFSHQF 3044
            +T    + + ++AI+RIA+KLRSLG++EE ++   Q           S G+IF+P   Q 
Sbjct: 48   ATSPDTEALPESAIRRIADKLRSLGFVEEPKNQETQENALSSNPTANSPGQIFVPLPTQL 107

Query: 3043 PKHRVGHTIDSSWSTPENPVPEPGSGSVITRFHELKSEVEKQKGSPK------REERVPT 2882
            PK+RVGHT+D+SWSTPENPVP+PG G+ I +FHEL+ E  K+K   +      ++ER P+
Sbjct: 108  PKYRVGHTLDTSWSTPENPVPQPGLGNSIQKFHELRDEFLKEKEKERLKNKEYKKERAPS 167

Query: 2881 LAELTIPVEEXXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCEDLSRM 2702
            LAELT+P EE              L +GKAGITEGIVNGIHERWRR E+VKI CED+ R+
Sbjct: 168  LAELTLPAEELRRLRTVGIALRKKLKIGKAGITEGIVNGIHERWRRMELVKITCEDICRL 227

Query: 2701 NMKRTHDLLERKTGGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXXXDE----LSSE 2534
            NMKRTH+LLE+KTGGLVIWRSGS+IILYRGA+YKYPYF                  + +E
Sbjct: 228  NMKRTHELLEKKTGGLVIWRSGSNIILYRGADYKYPYFSEISFENNSAQDATPDLFMGTE 287

Query: 2533 FSMVNRV----------DSRKDLSLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRF 2384
              M N            D +    ++ GVGSP RVRF+LPGEA+  EEAD+LL+GLGPRF
Sbjct: 288  EHMTNSSGTDVVKPDASDRKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEGLGPRF 347

Query: 2383 TDWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALG 2204
            TDWWG +P+P+DADLL A VPGY+RPFRLLPYGVKPKLT+DEMTTLRRL RPLP HF LG
Sbjct: 348  TDWWGCEPLPIDADLLPAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFVLG 407

Query: 2203 RNKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLISRDSDFIAF 2024
            RN+ LQGLAA++VKLWEKCEIAKVAVKRGVQNTNSE+MA+ELK LTGGTL+SRD +FI F
Sbjct: 408  RNRKLQGLAAAIVKLWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDREFIVF 467

Query: 2023 YRGKDFLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSELELRTNEPASVDELQETND 1844
            YRGKDFLP AVS+AIEERRK     EK     + S+A   E +  T    S D     N+
Sbjct: 468  YRGKDFLPSAVSSAIEERRKQVFEEEKRNGFNS-SVANAKERKQSTTGSVSDDGHARRNN 526

Query: 1843 QNKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGI 1664
            Q   K V E++K+ S + A+KR   KL+ ALE+KA+AE +L ELE+   PQ+ ++D+EGI
Sbjct: 527  Q---KGVQEKKKLTSMEAAIKRTADKLTTALEKKAEAENLLLELEEDEVPQQSDMDKEGI 583

Query: 1663 TEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAA 1484
            TEEER+ML+K+GL MKP++ +GRRGVFDGTVENMHLHWKYRELVK+I+  + IE VH  A
Sbjct: 584  TEEERFMLRKIGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVITGRKTIEEVHQIA 643

Query: 1483 RRLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNKKQAMKLSIEAQRRES 1304
            R LEAESGGILVAVE VN+ +AIIV+RGKNYERP +LRP+TLL+K++AMK SIEAQRR+S
Sbjct: 644  RMLEAESGGILVAVELVNKGHAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQS 703

Query: 1303 LKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETSDQPGFVEYSHNQDNAG 1124
            LKLHVLKLT+NI+ L+ +L K++  +++       R       SD  G   Y  +     
Sbjct: 704  LKLHVLKLTQNIEALQSRLAKNEEMVHIQSPDIVDRQVPVTGISDAAGGTNYQSSS---- 759

Query: 1123 SEAFANDQEDMEWCGNDSTPLDLNDCMDASSYSKETIRSEKPMNPFSHHDESAET----- 959
                A+  ED      D+ P    +    SS +    + E P++PF  ++   E      
Sbjct: 760  ----ASPTEDSGDAAEDTDPSSQKELSSDSSDTDHNSQQEFPIDPFFQYEGKVEAVGDTI 815

Query: 958  ELKSSFKSALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQDTAEPHIYANEFIESSNKLN 779
            + +    S++KE+ S  F   +  +    + S  ++ +S+   + H           +++
Sbjct: 816  QPEHQSISSIKESKS-MFNVNVDQKTFGSAVSESVSKSSRGEVKIHFSETRSFNKPREVD 874

Query: 778  KRKIESPLDI--------DDVEKGSIVPFGAAPLSNRDRLVLRKQALKMKKRPVLAIGRN 623
             +K  S L              +   +P     LSNR+RL+LRKQALKMKK+PVLA+GR+
Sbjct: 875  DKKEVSQLPSVKPQQALRSTRSRSEGMPTRKVQLSNRERLLLRKQALKMKKQPVLAVGRS 934

Query: 622  NVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVSQEPNKVILYR 443
            N+VTGVAK IK HFKK+PLAIVNVKGRAKGTS++EVVFKLEQATGAV+VSQEP+KVILYR
Sbjct: 935  NIVTGVAKNIKEHFKKYPLAIVNVKGRAKGTSVREVVFKLEQATGAVLVSQEPSKVILYR 994

Query: 442  GWIEGEEPHGVKEKIKARTSTQE-------MVSPQLIEAIRLECGLQSRKEEEGA 299
            GW  G E  G       R S           +SP+LI AIRLECGLQS  + E A
Sbjct: 995  GWGPGGE-RGASNGNDTRNSRNSREQKELMSISPELISAIRLECGLQSNHDMEVA 1048


>ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 1049

 Score =  964 bits (2493), Expect = 0.0
 Identities = 534/1008 (52%), Positives = 682/1008 (67%), Gaps = 45/1008 (4%)
 Frame = -3

Query: 3187 KTAIKRIAEKLRSLGYIEEDEHNSNQNP--QPKTIHGSAGEIFLPFSHQFPKHRVGHTID 3014
            ++AI+RIA+KLRSLG++E+ ++   Q           S G+IF+P   Q PK+RVGHT+D
Sbjct: 58   ESAIRRIADKLRSLGFVEQPKNQETQENALSSNPTANSPGQIFVPLPTQLPKYRVGHTLD 117

Query: 3013 SSWSTPENPVPEPGSGSVITRFHELKSEVEKQKGSPK------REERVPTLAELTIPVEE 2852
            +SWSTPENPVP+PG G  I +FHEL+ E  K+K   +      ++ER P+LAELT+P EE
Sbjct: 118  TSWSTPENPVPQPGLGKSIQKFHELRDEFLKEKDKERLKNKEYKKERAPSLAELTLPAEE 177

Query: 2851 XXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCEDLSRMNMKRTHDLLE 2672
                          L +GKAGITEGIVNGIHERWRR E+VKI CED+ R+NMKRTH+LLE
Sbjct: 178  LRRLRTVGIALRKKLKIGKAGITEGIVNGIHERWRRIELVKITCEDICRLNMKRTHELLE 237

Query: 2671 RKTGGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXXXDE----LSSEFSMVNRV--- 2513
            +KTGGLVIWRSGS+IILYRGA+YKYPYF                  + +E  M N     
Sbjct: 238  KKTGGLVIWRSGSNIILYRGADYKYPYFSENSFENNSAQDANPDLFMGAEEHMTNSSGID 297

Query: 2512 -------DSRKDLSLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDWWGYDPIP 2354
                   D +    ++ GVGSP RVRF+LPGEA+  EEAD+LL+GLGPRFTDWWG +P+P
Sbjct: 298  AVKSDASDRKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEGLGPRFTDWWGCEPLP 357

Query: 2353 VDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNKNLQGLAA 2174
            +DADLL A VPGY+RPFRLLPYGVKPKLT+DEMTTLRRL RPLP HF LGRN+ LQGLAA
Sbjct: 358  IDADLLPAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAA 417

Query: 2173 SMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLISRDSDFIAFYRGKDFLPPA 1994
            ++VKLWEKCEIAKVAVKRGVQNTNSE+M +ELK LTGGTL+SRD +FI FYRGKDFLP A
Sbjct: 418  AIVKLWEKCEIAKVAVKRGVQNTNSELMVEELKWLTGGTLLSRDREFIVFYRGKDFLPSA 477

Query: 1993 VSTAIEERRKHSVHREKHYPDQTPSIATKSELELRTNEPASVDELQETNDQNKRKLVLEQ 1814
            VS+AIEERRK     EK     + S+A   E +  T E  S D     N+Q   K V E+
Sbjct: 478  VSSAIEERRKQVFEEEKRNGFNS-SVANAKERKQSTTESVSDDGHAHRNNQ---KGVQEK 533

Query: 1813 RKVRSKDLAMKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGITEEERYMLKK 1634
            +K+ S + A+KR   KL+ ALE+KA+AE++L ELE+   PQ+ ++D+EGITEEER+ML+K
Sbjct: 534  KKLTSMEAAIKRTADKLTTALEKKAEAEKLLLELEEDEVPQQSDMDKEGITEEERFMLRK 593

Query: 1633 VGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAARRLEAESGGI 1454
            +GL MKP++ +GRRGVFDGTVENMHLHWKYRELVK+I+  + IE VH  AR LEAESGGI
Sbjct: 594  IGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVITGRKNIEEVHQIARMLEAESGGI 653

Query: 1453 LVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNKKQAMKLSIEAQRRESLKLHVLKLTK 1274
            LVAVERVN+ YAIIV+RGKNYERP +LRP+TLL+K++AMK SIEAQRR+SLKLHVLKLT+
Sbjct: 654  LVAVERVNKGYAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLTQ 713

Query: 1273 NIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETSDQPGFVEYSHNQDNAGSEAFANDQED 1094
            NI+ L+ +L K++   ++       R       SD  G   Y            A+  ED
Sbjct: 714  NIEALQSRLAKNEEISHIQSPDIVDRQVPVMGISDAAGGTNY--------QSIVASPIED 765

Query: 1093 MEWCGNDSTPLDLNDCMDASSYSKETIRSEKPMNPFSHHDESAET-----ELKSSFKSAL 929
                  D+ P    +  +  S +    + E P+NPF  ++   E      + +    S++
Sbjct: 766  SGDAAEDTDPSSQKELSNDFSDTDHDSQQEFPINPFFQYEGKVEAMGDTIQPQHQSISSI 825

Query: 928  KETHS--NTFLDEMGDRDDDYSTSLPMNSTSQDTAEPHIYANE---FIESSNKLNKRKIE 764
            KE+ S  N  +D+     + + +++  + +     E  I+ +E   F +     NK ++ 
Sbjct: 826  KESKSMFNVNVDQ-----ETFGSAVSESVSKSSRGEVKIHFSETRSFNKPREVNNKMEVS 880

Query: 763  SPLDIDDVE-------KGSIVPFGAAPLSNRDRLVLRKQALKMKKRPVLAIGRNNVVTGV 605
             P  +   +       +   +      LSNR+RL+LRKQALKMKK+PVLA+GR+N+VTGV
Sbjct: 881  QPPPVKPQQTLRSTRSRSEGMSTRRVQLSNRERLLLRKQALKMKKQPVLAVGRSNIVTGV 940

Query: 604  AKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVSQEPNKVILYRGWIEGE 425
            AK IK HFKK+PLAIVNVKGRAKGTS++EVVFKLEQATGAV+VSQEP+KVILYRGW  G 
Sbjct: 941  AKNIKEHFKKYPLAIVNVKGRAKGTSVREVVFKLEQATGAVLVSQEPSKVILYRGWGPGG 1000

Query: 424  E--PHGVKEKIKARTSTQE----MVSPQLIEAIRLECGLQSRKEEEGA 299
            E       +   ++ S ++     +SP+LI AIRLECGLQS  + E A
Sbjct: 1001 ERGASNGNDTSNSKNSREQKELMSISPELISAIRLECGLQSNNDMEVA 1048


>ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 1032

 Score =  958 bits (2476), Expect = 0.0
 Identities = 537/997 (53%), Positives = 682/997 (68%), Gaps = 37/997 (3%)
 Frame = -3

Query: 3202 NQNVSKTAIKRIAEKLRSLGYIEEDEHNSNQNPQPKTIHGSA-GEIFLPFSHQFPKHRVG 3026
            ++ + K+AI+RIA+KLRSLG+ E     S   P P     SA G IF+P  +Q PK+RVG
Sbjct: 51   SETLPKSAIQRIADKLRSLGFTE-----SPPEPLPDPNSPSAPGAIFVPLPNQLPKYRVG 105

Query: 3025 HTIDSSWSTPENPVPEPGSGSVITRFHELKSEVEKQKG-----SPKREERVPTLAELTIP 2861
            HTIDSSWS PENPVPEPG+G+ I RFHEL+ EV+K K        KREER P+LAEL++ 
Sbjct: 106  HTIDSSWSMPENPVPEPGTGTAIKRFHELRGEVQKWKKRDGVREKKREERAPSLAELSLT 165

Query: 2860 VEEXXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCEDLSRMNMKRTHD 2681
             EE              LNVGKAGITEGIVN IHE WRRSEVVKI CEDL R+NMKRTHD
Sbjct: 166  EEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVVKIACEDLCRLNMKRTHD 225

Query: 2680 LLERKTGGLVIWRSGSSIILYRGANYKYPYF------------LXXXXXXXXXXXDELSS 2537
            LLERKTGG+V+WRSGS IILYRG NY YPYF                         E  S
Sbjct: 226  LLERKTGGIVVWRSGSKIILYRGPNYIYPYFSHEILEDEGSQDALPASHSDDGGNSETES 285

Query: 2536 EFSMVNRVDSRKDLS--------LVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFT 2381
              S +N   S    S        L+ GVG+P+RVRFQLPGEA+LAE+A+ LL+GLGPRF+
Sbjct: 286  TLSCINDERSAGPTSSVKMPSPTLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFS 345

Query: 2380 DWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGR 2201
            DWWGYDP+PVDADLL A VPGYR+PFRLLPYGVKPKLT+DEMT+LRRL+RPLP HFALGR
Sbjct: 346  DWWGYDPLPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGR 405

Query: 2200 NKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLISRDSDFIAFY 2021
            N+ LQGLAAS+++LWEKCEIAK+AVKRGVQNTN+++MA+EL+ LTGGTL+SRD +FI  Y
Sbjct: 406  NRKLQGLAASIIQLWEKCEIAKIAVKRGVQNTNNKLMAEELQLLTGGTLLSRDREFIVLY 465

Query: 2020 RGKDFLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSELELRTNEPASVDELQETNDQ 1841
            RGKDFLP AVS+A+E++R   +H  K   D +P+  T   L+L  NE    +E Q     
Sbjct: 466  RGKDFLPFAVSSAMEQKRHMRLHEMKQ-TDNSPA-TTGQGLKLEINENGPTNESQSIT-- 521

Query: 1840 NKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGIT 1661
              +K+V E+RK+ S + +M++ + KLS+ALE+KAKAE  LA+LE+  + Q+PEID+EGIT
Sbjct: 522  GWKKIVSERRKLMSSETSMRKTSIKLSIALEKKAKAEEFLAKLEEEEKLQQPEIDKEGIT 581

Query: 1660 EEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAAR 1481
             EERYMLKKVGL MKP++ +GRRGVFDGTVENMHLHWKYRELVK+I+++R  + VH  AR
Sbjct: 582  VEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVAR 641

Query: 1480 RLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNKKQAMKLSIEAQRRESL 1301
             LEAESGGILVAVERV R++AII+FRGKNY+RP  LRP +LLNKK+A+K SIEAQRR+SL
Sbjct: 642  TLEAESGGILVAVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSL 701

Query: 1300 KLHVLKLTKNIDQLKLQLIKDDTQM---NLVQST--KHKRPNTKFETSDQPGFVEYSHNQ 1136
            KLHVLKLT+N+++LKL+L +D   +   ++  ST  + K    + +T+     V  S   
Sbjct: 702  KLHVLKLTQNVEELKLKLDEDKRAIGMESIKTSTFQQGKEGIDEIQTTGSLKLVADSACL 761

Query: 1135 DNAGSEAFANDQEDMEWCGNDSTPLDLNDCMDASSYSKETIRSEKPMNPFSHHDESAETE 956
             +A +     + E  +      T      C+D S    +T           H+ + +   
Sbjct: 762  THAENSTCLEENEVAKVKKGHGTHSSGTICLDTSVNRLQTTNDVF----LIHNGDQSNAT 817

Query: 955  LKSSFKSALKETHSNTFLD---EMG---DRDDDYSTSLPMNSTSQDTAEPHIYANEFIES 794
            ++ SF+S  +  H+   +D   E G    +    S S   NS + D A  H+  N+  + 
Sbjct: 818  VRPSFESVRQGNHAKVPMDTNAEFGTIEPQSGANSLSGESNSGTSD-AVHHVAMNKDTKP 876

Query: 793  SNKLNKRKIESPLDIDDVEKGSIVPFGAAPLSNRDRLVLRKQALKMKKRPVLAIGRNNVV 614
            S +L + K    L    + +    P     LSN++RL+LR+QALKMKK PVL++G++NV+
Sbjct: 877  SVRLEEEKSPPLLSSTRINQPGYFPANVPQLSNKERLLLRRQALKMKKLPVLSVGKSNVI 936

Query: 613  TGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVSQEPNKVILYRGWI 434
            TGVAK IK HFKKH LAIVNVKGRAKGTS+QE+VFKLEQATGAV+VSQEP+KVILYRGW 
Sbjct: 937  TGVAKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATGAVLVSQEPSKVILYRGW- 995

Query: 433  EGEEPHGVKEKIKARTSTQEMVSPQLIEAIRLECGLQ 323
            E E+       +K     +  +S +L+ AIR+ECGL+
Sbjct: 996  EEEDRKQKATMMKNSGEDRLSMSSELMAAIRIECGLR 1032


>gb|EYU44699.1| hypothetical protein MIMGU_mgv1a000630mg [Mimulus guttatus]
          Length = 1040

 Score =  951 bits (2458), Expect = 0.0
 Identities = 540/1012 (53%), Positives = 680/1012 (67%), Gaps = 47/1012 (4%)
 Frame = -3

Query: 3199 QNVSKTAIKRIAEKLRSLGYIEEDEHNS---NQNPQPKTIHGSAGEIFLPFSHQFPKHRV 3029
            Q + ++AIKRIAEKLRSLGY+E+  ++S   N NP P     S GEIF+P     PK+R+
Sbjct: 55   QTLPQSAIKRIAEKLRSLGYVEDSGNDSASRNSNPGPN----SPGEIFVPLPTHLPKYRI 110

Query: 3028 GHTIDSSWSTPENPVPEPGSGSVITRFHELKS---EVEKQKGSPKREE----RVPTLAEL 2870
            GHT+D SWSTPENPVPEPGSG+ I RFHEL+    E E+++   KR+E      P+LAEL
Sbjct: 111  GHTLDPSWSTPENPVPEPGSGNAIQRFHELRRGVLEEEEKERIRKRDEGKRGNSPSLAEL 170

Query: 2869 TIPVEEXXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCEDLSRMNMKR 2690
             +P  E              L VGKAGITEGIVNGIHERWRR+E+VKI CED+ R+NMKR
Sbjct: 171  KLPPGELRRLRSIGIGLKKKLKVGKAGITEGIVNGIHERWRRTELVKITCEDICRLNMKR 230

Query: 2689 THDLLERKTGGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXXXDEL----------- 2543
            TH+LLE+KTGGLV+WRSGS+IILYRG++YKYPYF+           +             
Sbjct: 231  THELLEKKTGGLVVWRSGSNIILYRGSDYKYPYFMADNSSNDSSSEESPDMDNDQHSNAL 290

Query: 2542 -SSEFS------MVNRVDSRKDLS---LVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLG 2393
             SSE S        N ++S   +S   LV GVG P RVRFQLPGEA++  EAD LL+GLG
Sbjct: 291  ESSEESPDLGSPRTNALESNTQISHPSLVQGVGLPDRVRFQLPGEAEIVAEADSLLEGLG 350

Query: 2392 PRFTDWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHF 2213
            PRFTDWWG DP+PVDADLL A VPGY+RPFRLLPYGV  KLT+DEMTTLRRL RPLP HF
Sbjct: 351  PRFTDWWGNDPLPVDADLLPAVVPGYKRPFRLLPYGVNHKLTNDEMTTLRRLGRPLPIHF 410

Query: 2212 ALGRNKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLISRDSDF 2033
            ALGRN+  QGLAA +VKLWEKCEIAK+AVKRGVQNTNS +MA+ELK LTGGTL+SRD +F
Sbjct: 411  ALGRNRKHQGLAACIVKLWEKCEIAKIAVKRGVQNTNSVLMAEELKWLTGGTLLSRDREF 470

Query: 2032 IAFYRGKDFLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSELELRTNEPASVDELQE 1853
            I  YRGKDFLP AVS+AI+ERRK+ +   K    +  +++  +E E R        E ++
Sbjct: 471  IVLYRGKDFLPAAVSSAIQERRKYEIDASK---TRAGNLSNLNEKEHRHGTKEYATEAEQ 527

Query: 1852 TNDQNKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDR 1673
             N+ ++   V E+R+VR  + AM+R +TKLSMALE+KA+AE++L EL K   PQ PE D+
Sbjct: 528  HNEADQNLQVREKRRVRFSESAMERTSTKLSMALEKKARAEKLLEELAKEESPQPPETDK 587

Query: 1672 EGITEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVH 1493
            EGITEEERYML+KVGL MK ++ +GRRGVFDGTVENMHLHWKYRELVK+   +R IE VH
Sbjct: 588  EGITEEERYMLRKVGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVCIGNRSIEEVH 647

Query: 1492 AAARRLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNKKQAMKLSIEAQR 1313
              AR LEAESGGILVAVERV++ + IIV+RGKNY RP +LRP+TLL+K++AMK S+EAQR
Sbjct: 648  GVARTLEAESGGILVAVERVSKGFDIIVYRGKNYTRPASLRPQTLLSKREAMKRSLEAQR 707

Query: 1312 RESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETSD-QPGFVEYSHNQ 1136
            RESLKLHVLKL+KNID+LKL++ KD+            RP+    T D + GFV  SH  
Sbjct: 708  RESLKLHVLKLSKNIDELKLKMAKDENT---------NRPHL---TEDLELGFVRESHET 755

Query: 1135 D--NAGSEAFANDQEDMEWCGNDSTPLDLNDCMDAS-SYSKETIRSEKPMNPFSHHDESA 965
            D  N   E   +  ED         P D++   +   +Y  ET  +E  + P S  +E  
Sbjct: 756  DATNKDPEEPMHISEDTVHIAQKDLPGDVSLQSEVKVNYLFETTEAE--VQPTSLSNEG- 812

Query: 964  ETELKSSFKSALKETHSNTFLDEMGDRDDDYSTSLPMN----STSQDTAEPHIYANEFIE 797
                 +SF     +  +  F+     R  D   S P       T +  ++   Y N  IE
Sbjct: 813  -----NSFSDKNNQIGNMEFV--RSPRSQDRRNSSPSTYIRPQTGRRKSDGGGYRNVDIE 865

Query: 796  SSNKLNKRKIESPLDIDDVEKGSIVPFGAAPLSNRDRLVLRKQALKMKKRPVLAIGRNNV 617
             S        + P+     E+ S++P  +  LSN++RL+LRKQAL+MKK P+LA+G+ NV
Sbjct: 866  PSG-------QKPMK----ERPSLMPSRSVQLSNKERLLLRKQALRMKKIPILAVGKRNV 914

Query: 616  VTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVSQEPNKVILYRGW 437
            VTGV KTIK HF+KHPLAIVN+KGRAKGTS QEV++ LEQ+TGAV+VSQEP+KVILYRGW
Sbjct: 915  VTGVTKTIKEHFEKHPLAIVNIKGRAKGTSAQEVIYNLEQSTGAVLVSQEPSKVILYRGW 974

Query: 436  -IEGEEPHGVK-------EKIKARTSTQEMVSPQLIEAIRLECGLQSRKEEE 305
              + +    ++       +       T+ ++SP+LI A+RLECGL+   E E
Sbjct: 975  GFDTDSESNMRQNQDFKYDSTNKEVKTRPLISPELISAMRLECGLKPVDEIE 1026


>ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic-like [Cucumis
            sativus]
          Length = 1053

 Score =  951 bits (2458), Expect = 0.0
 Identities = 537/1004 (53%), Positives = 684/1004 (68%), Gaps = 44/1004 (4%)
 Frame = -3

Query: 3202 NQNVSKTAIKRIAEKLRSLGYIEEDEHNSNQNPQPKTIHGSAGEIFLPFSHQFPKHRVGH 3023
            ++ + K+AI+RIA+KLRSLG+ E         P P +   + G IF+P  +Q PK+RVGH
Sbjct: 71   SETLPKSAIQRIADKLRSLGFTEXTPRTL---PDPNS-PSAPGAIFVPLPNQLPKYRVGH 126

Query: 3022 TIDSSWSTPENPVPEPGSGSVITRFHELKSEVEKQKG-----SPKREERVPTLAELTIPV 2858
            TIDSSWSTPENPVPEPG+G+ I RFHEL+ EV+K K        KREER P+LAEL++  
Sbjct: 127  TIDSSWSTPENPVPEPGTGTAIKRFHELRGEVQKWKKRDGVREKKREERAPSLAELSLTE 186

Query: 2857 EEXXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCEDLSRMNMKRTHDL 2678
            EE              LNVGKAGITEGIVN IHE WRRSEVVKI CEDL R+NMKRTHDL
Sbjct: 187  EELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEFWRRSEVVKIACEDLCRLNMKRTHDL 246

Query: 2677 LERKTGGLVIWRSGSSIILYRGANYKYPYF------------LXXXXXXXXXXXDELSSE 2534
            LERKTGG+V+WRSGS IILYRG NY YPYF                         E  S 
Sbjct: 247  LERKTGGIVVWRSGSKIILYRGPNYIYPYFSHEILEDEGSQDALPASHSDDGGNSETEST 306

Query: 2533 FSMVNRVDSRKDLS--------LVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTD 2378
             S +N   S    S        L+ GVG+P+RVRFQLPGEA+LAE+A+ LL+GLGPRF+D
Sbjct: 307  LSCINDERSAGPTSYVKMPSPTLIQGVGAPNRVRFQLPGEAELAEDAESLLEGLGPRFSD 366

Query: 2377 WWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRN 2198
            WWGYDP+PVDADLL A VPGYR+PFRLLPYGVKPKLT+DEMT+LRRL+RPLP HFALGRN
Sbjct: 367  WWGYDPLPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPCHFALGRN 426

Query: 2197 KNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLISRDSDFIAFYR 2018
            + LQGLAAS+++LWEKCEIAK+AVKRGVQNTN+++MA+EL+ LTGGTL+SRD +FI  YR
Sbjct: 427  RKLQGLAASIIQLWEKCEIAKIAVKRGVQNTNNKLMAEELQLLTGGTLLSRDREFIVLYR 486

Query: 2017 GKDFLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSELELRTNEPASVDELQETNDQN 1838
            GKDFLP AVS+A+E++R   +H  K   D +P+  T   L+L  NE    +E Q      
Sbjct: 487  GKDFLPFAVSSAMEQKRHMRLHEMKQ-TDNSPA-TTGQGLKLEINENGPTNESQSIT--G 542

Query: 1837 KRKLVLEQRKVRSKDLAMKRINTKLS-MALERKAKAERILAELEKVAEPQKPEIDREGIT 1661
             +K+V E+RK+ S + +M++ + KLS + + +KAKAE  LA+LE+  + Q+PEID+EGIT
Sbjct: 543  WKKIVSERRKLMSSETSMRKTSIKLSIVCIRKKAKAEEFLAKLEEEEKLQQPEIDKEGIT 602

Query: 1660 EEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAAR 1481
             EERYMLKKVGL MKP++ +GRRGVFDGTVENMHLHWKYRELVK+I+++R  + VH  AR
Sbjct: 603  VEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNERSFKTVHDVAR 662

Query: 1480 RLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNKKQAMKLSIEAQRRESL 1301
             LEAESGGILVAVERV R++AII+FRGKNY+RP  LRP +LLNKK+A+K SIEAQRR+SL
Sbjct: 663  TLEAESGGILVAVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKRSIEAQRRKSL 722

Query: 1300 KLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETSDQPGFVEYSHNQDNAGS 1121
            KLHVLKLT+N+++LKL+L +D   + + +S K         ++ QPG  E        GS
Sbjct: 723  KLHVLKLTQNVEELKLKLDEDKRAIGM-ESIK--------TSTFQPG-KEGIDEIQTTGS 772

Query: 1120 EAFANDQEDMEWCGNDSTPLDLNDCMDA----SSYSKETIRSEKPMNPFS--------HH 977
                 D   +    N ST L+ N+         ++S  TI  +  +N           H+
Sbjct: 773  LKLVADSACLTHAEN-STCLEENEVAKVKKGHGTHSSGTICLDTSVNRLQTTNDVFLIHN 831

Query: 976  DESAETELKSSFKSALKETHSNTFLD---EMG---DRDDDYSTSLPMNSTSQDTAEPHIY 815
             + +   ++ SF+S  +  H+   +D   E G    +    S S   NS + D A  H+ 
Sbjct: 832  GDQSNATVRPSFESVRQGNHAKVPMDTNAEFGTIEPQSGANSLSGESNSGTSD-AVHHVA 890

Query: 814  ANEFIESSNKLNKRKIESPLDIDDVEKGSIVPFGAAPLSNRDRLVLRKQALKMKKRPVLA 635
             N+  + S +L + K    L    + +    P     LSN++RL+LR+QALKMKK PVL+
Sbjct: 891  MNKDTKPSVRLEEEKSPPLLSSTRINQPGYFPANVPQLSNKERLLLRRQALKMKKLPVLS 950

Query: 634  IGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVSQEPNKV 455
            +G++NV+TGVAK IK HFKKH LAIVNVKGRAKGTS+QE+VFKLEQATGAV+VSQEP+KV
Sbjct: 951  VGKSNVITGVAKAIKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATGAVLVSQEPSKV 1010

Query: 454  ILYRGWIEGEEPHGVKEKIKARTSTQEMVSPQLIEAIRLECGLQ 323
            ILYRGW E E+       +K     +  +S +L+ AIR+ECGL+
Sbjct: 1011 ILYRGW-EEEDRKQKATMMKNSGEDRLSMSSELMAAIRIECGLR 1053


>ref|XP_006849108.1| hypothetical protein AMTR_s00028p00245370 [Amborella trichopoda]
            gi|548852581|gb|ERN10689.1| hypothetical protein
            AMTR_s00028p00245370 [Amborella trichopoda]
          Length = 1042

 Score =  949 bits (2452), Expect = 0.0
 Identities = 548/1035 (52%), Positives = 676/1035 (65%), Gaps = 63/1035 (6%)
 Frame = -3

Query: 3226 SSSSTHTGNQNVSKTAIKRIAEKLRSLGYIEEDEHNSNQNPQPKTIHGSAGEIFLPFSHQ 3047
            ++S++H  N  VSKTAI+RIAEKL+SLGY+EE   +  Q   P    GS GEIF+P    
Sbjct: 48   ATSASHCSNGTVSKTAIQRIAEKLKSLGYVEELNDSEPQCTGP----GSPGEIFIPRLEN 103

Query: 3046 FPKHRVGHTIDSSWSTPENPVPEPGSGSVITRFHELKSEVEKQKGSPKREERVPTLAELT 2867
              K RVG T+D SWSTPENPVPEPGSGS I+RFH L+ E +K     +R    P+LAEL 
Sbjct: 104  LAKIRVGSTLDKSWSTPENPVPEPGSGSAISRFHVLRKEAKKNAVKGERGS-APSLAELR 162

Query: 2866 IPVEEXXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCEDLSRMNMKRT 2687
            IP  E              L VGK G+TEGIVNGIHERWRRSE+VKI+C+DLS +NMKRT
Sbjct: 163  IPEAELQRLRSIGICLEKKLIVGKPGVTEGIVNGIHERWRRSELVKIKCQDLSMVNMKRT 222

Query: 2686 HDLLERKTGGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXXXDELSSEFSMVNRVDS 2507
            H++LE KTGG+VI RSGS IILYRGANY YPYF+            E+S + S+V    S
Sbjct: 223  HEILETKTGGIVICRSGSIIILYRGANYTYPYFVAGEDLSENEDIHEVSFKSSVVYGSGS 282

Query: 2506 RKD----------------------LSLVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLG 2393
             ++                       S+V GVGSP++VRFQLPGE QL +EADRLLDGLG
Sbjct: 283  NEENKTNSLPRVGGISAVEATQITGRSIVLGVGSPNKVRFQLPGERQLDKEADRLLDGLG 342

Query: 2392 PRFTDWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHF 2213
            PRFTDWWGY P+PVDADLL A V GYR+PFRLLPYGVKPKLTD EMTTLRRL RPLP HF
Sbjct: 343  PRFTDWWGYGPLPVDADLLPATVSGYRKPFRLLPYGVKPKLTDSEMTTLRRLGRPLPCHF 402

Query: 2212 ALGRNKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLISRDSDF 2033
            ALGRN+NLQGLA S+V+LWEKCEIAK+AVKRGVQNTNSE+MA+ELKRLTGGTL+SRD +F
Sbjct: 403  ALGRNRNLQGLATSIVRLWEKCEIAKIAVKRGVQNTNSELMAEELKRLTGGTLLSRDREF 462

Query: 2032 IAFYRGKDFLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSEL--ELRTNEPASVDEL 1859
            I FYRGKDFLPPAVS+AIEERR   V R++   ++   +++++ L  ++R  +  S  EL
Sbjct: 463  IVFYRGKDFLPPAVSSAIEERRTVDVLRKQLKGNRNLDLSSQASLGYDVRLVKTTSDAEL 522

Query: 1858 QETNDQNKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAELEKVAEPQKPEI 1679
            Q+ N+Q++ KL  +Q K    ++AMKR++ KLS ALE+K  AER LAELE  AE  KP+I
Sbjct: 523  QDLNNQDEEKLSKDQLKPMKVNVAMKRLDWKLSEALEKKQMAERKLAELESKAELSKPDI 582

Query: 1678 DREGITEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIEN 1499
            D+EGITEEERYML+KVGL MK ++ +GRRGVFDGT+ENMHLHWKYREL+K+IS DR I  
Sbjct: 583  DKEGITEEERYMLRKVGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELIKIISKDRSIAE 642

Query: 1498 VHAAARRLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNKKQAMKLSIEA 1319
            VH AAR LEAESGGILV+VE VN+ +AIIV+RGKNY+RP NLRP+ LLNK++AMK S+EA
Sbjct: 643  VHHAARTLEAESGGILVSVETVNKGHAIIVYRGKNYQRPDNLRPQNLLNKREAMKHSLEA 702

Query: 1318 QRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETSDQPGFVEYSHN 1139
            QRRE+                    KDD  +    ST++   +            E  + 
Sbjct: 703  QRREA--------------------KDDRVVASPHSTRYLGSSN----------CELGNT 732

Query: 1138 QDNAGSEAFANDQEDMEWCGNDSTPLDLNDCMDASSYSKETIRSEKPMN-PFSHHDESAE 962
            +   GS  ++N  +DME       PL       +SS  ++ +     +    S+ D++ +
Sbjct: 733  EHTLGSLDYSNHFKDMENGDASQGPLH-----SSSSDDEDVVTPSNGVRWSTSYADDAQQ 787

Query: 961  TELK--------------SSFKSALKETHSNTFLDEMGDR---DDDYSTSLPM--NSTSQ 839
              +K              SS K+ +  + S    DE  +R   + D+ T   M  N  + 
Sbjct: 788  VVVKRRFPRDFEKSPKDVSSSKTVVSRSCSCVSQDEAEERLELEPDFHTEDIMLHNKPAL 847

Query: 838  DTAE-----PHIYANEFIESSNKLNKRKIESPLDIDDVEKGSIVPFGAAPLSNRDRLVLR 674
             T E     P +     + S   L       PLD      G    F A  LSN++RL+LR
Sbjct: 848  ATTEGEPLLPPMIEPTGLSSKAPLGNTSSSKPLDKRVSSIGVETSFKAQSLSNKERLILR 907

Query: 673  KQALKMKKRPVLAIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQA 494
            KQAL MKKRPVLAIGRNN+VTGVA+ IKTHFKK+PLAIVNVKGRAKGTS+QEVVFKLEQA
Sbjct: 908  KQALTMKKRPVLAIGRNNIVTGVAEAIKTHFKKNPLAIVNVKGRAKGTSVQEVVFKLEQA 967

Query: 493  TGAVMVSQEPNKVILYRGWIEGEEPHGVKEKIKARTST--------------QEMVSPQL 356
            TGAV+VSQEPNKVILYRGW  G++  G   K   R+                 +  SPQL
Sbjct: 968  TGAVLVSQEPNKVILYRGWGLGDQNSGTVSKTSKRSINGGKALGRSGNGFVGVKDASPQL 1027

Query: 355  IEAIRLECGLQSRKE 311
            + A+RLECGL S +E
Sbjct: 1028 LAAMRLECGLISNEE 1042


>ref|XP_006408495.1| hypothetical protein EUTSA_v10019986mg [Eutrema salsugineum]
            gi|557109641|gb|ESQ49948.1| hypothetical protein
            EUTSA_v10019986mg [Eutrema salsugineum]
          Length = 998

 Score =  937 bits (2421), Expect = 0.0
 Identities = 534/1000 (53%), Positives = 672/1000 (67%), Gaps = 36/1000 (3%)
 Frame = -3

Query: 3217 STHTGNQNVSKTAIKRIAEKLRSLGYIEEDEHNSNQNPQPKTIHGSAGEIFLPFSHQFPK 3038
            S+ +  + + ++AI+RIA+KLRSLG+ EE +H++    + ++ + S GEIF+P  +Q P 
Sbjct: 49   SSASDRKTLPQSAIQRIADKLRSLGFAEE-KHDTKTTGE-ESGNNSPGEIFVPLPNQLPI 106

Query: 3037 HRVGHTIDSSWSTPENPVPEPGSGSVITRFHELKSEVEKQKG-SPKREERVPTLAELTIP 2861
            HRVGHTID+SWSTP  PVP+PGSG+ I+R+HELK   +K+K    K EE+VP+LAELT+P
Sbjct: 107  HRVGHTIDTSWSTPSYPVPKPGSGTAISRYHELKRVWKKEKKVERKNEEKVPSLAELTLP 166

Query: 2860 VEEXXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCEDLSRMNMKRTHD 2681
              E              L +GKAGITEGIVNGIHERWR +EVVKI CED+SRMNMKRTHD
Sbjct: 167  PAELRRLRSAGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHD 226

Query: 2680 LLERKTGGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXXXDELSSEFSMVNRV-DSR 2504
            +LE KTGGLVIWRSGS I+LYRG NY+YPYF+           +  S   SM+  V DSR
Sbjct: 227  VLETKTGGLVIWRSGSKILLYRGVNYQYPYFVSDQDLAHDSSVETASGASSMIQGVVDSR 286

Query: 2503 KDLS-----------------LVNGVGSPSRVRFQLPGEAQLAEEADRLLDGLGPRFTDW 2375
               S                 L+ GVGSP +VRFQLPGE QL EEADRLL+GLGPRFTDW
Sbjct: 287  DKQSTAQSSPTSISNKMIKPLLMQGVGSPDKVRFQLPGEVQLVEEADRLLEGLGPRFTDW 346

Query: 2374 WGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRPLPTHFALGRNK 2195
            W YDP+PVDADLL A VP YRRPFRLLPYG+ PKLTDDEMTTLRRL RPLP HFALGRN+
Sbjct: 347  WAYDPLPVDADLLPAIVPEYRRPFRLLPYGLSPKLTDDEMTTLRRLGRPLPCHFALGRNR 406

Query: 2194 NLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLISRDSDFIAFYRG 2015
            NLQGLA ++VKLWEKCE+ K+AVKRGVQNTNSE+MA+ELK LTGGTLISRD DFI  YRG
Sbjct: 407  NLQGLAVAIVKLWEKCEVVKIAVKRGVQNTNSELMAEELKWLTGGTLISRDKDFIVLYRG 466

Query: 2014 KDFLPPAVSTAIEERRKHSVHREKHYPDQTPSIATKSELELRTNEPASVDELQETNDQNK 1835
            KDFLP AVS+AIEERR+ ++  EK       +  TK+E E++   P   D+++   +  K
Sbjct: 467  KDFLPSAVSSAIEERRRQTMIMEK--SSVHGNKLTKNEKEIQPQAP--TDDIEPAAEYKK 522

Query: 1834 RKLVLEQRKVR---SKDLAMKRINTKLSMALERKAKAERILAELEKVAEPQKPEIDREGI 1664
              +   Q K R   S + +++R + KLSMALE+KA AE+ILAELE    PQ+ +ID+EGI
Sbjct: 523  DHVQTHQMKPRQRKSPEASLERTSIKLSMALEKKANAEKILAELENRESPQQSDIDKEGI 582

Query: 1663 TEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYRELVKLISSDRCIENVHAAA 1484
            T++E+YML+K+GL MKP++ +GRRGVFDGT+ENMHLHWKYRELVK+I +++ IE+    A
Sbjct: 583  TDDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEKSIESAREVA 642

Query: 1483 RRLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLLNKKQAMKLSIEAQRRES 1304
              LEAESGGILVAVE V++ YAIIV+RGKNYERP  LRP+TLL+K++A+K S+EAQRR+S
Sbjct: 643  EILEAESGGILVAVEMVSKGYAIIVYRGKNYERPPCLRPQTLLSKREALKRSVEAQRRKS 702

Query: 1303 LKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFETSDQPGFVEYSHNQDNAG 1124
            LKLHVLKL+ NI++L  QL+KD                T    SD         + +   
Sbjct: 703  LKLHVLKLSDNIEELNRQLVKDSA--------------TNATWSD-------GESSNRMF 741

Query: 1123 SEAFANDQEDMEWCGNDSTPLDLNDCMDASSYSKETIRSEKPMNPFSHHDESAETELKSS 944
             E  AN Q ++   GN S P  L       S  +E+   +      SH D   E+   SS
Sbjct: 742  QEETANQQIEL---GNSSDPRVL-------SSGEESCEDDS-----SHEDREDESGSGSS 786

Query: 943  FKSALKETHSNTFLDEMGDRDDD--YSTSLPMNSTSQDTAEPHIYANEFIESSNKLNKRK 770
             +       S   L E G  +    +  S+P NS     AE  +   + +  S     R 
Sbjct: 787  QRHG-NSLDSTAVLGETGSAEASSFHDRSMPRNSFL--NAERKVPTGQELGFSTGSGSR- 842

Query: 769  IESPLDIDDVEKGSIVPFGAAPLSNRDRLVLRKQALKMKKRPVLAIGRNNVVTGVAKTIK 590
              S L     EK  +V    A LSNR+RL+LRKQALKMKKRP  A+GR+NVVTG+AKT+K
Sbjct: 843  -ISALTESKSEKDGLV----ADLSNRERLILRKQALKMKKRPPFAVGRSNVVTGLAKTLK 897

Query: 589  THFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVSQEPNKVILYRGWIEGEE---- 422
             HF+++PLAIVNVKGRAKGTS+QEV+ KL++ TGA++VSQEP+KVILYRGW   EE    
Sbjct: 898  IHFERNPLAIVNVKGRAKGTSVQEVIAKLKEETGALLVSQEPSKVILYRGWGAEEEMKSF 957

Query: 421  --PHGVKEKIKARTSTQEM------VSPQLIEAIRLECGL 326
               + VK  I   + ++        VSP LI+AI+LECGL
Sbjct: 958  YPNNNVKNSINLTSHSKRFVKDPPPVSPALIQAIKLECGL 997


>ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|22531018|gb|AAM97013.1|
            unknown protein [Arabidopsis thaliana]
            gi|37202002|gb|AAQ89616.1| At3g01370 [Arabidopsis
            thaliana] gi|332640136|gb|AEE73657.1| CRM family member 2
            [Arabidopsis thaliana]
          Length = 1011

 Score =  927 bits (2397), Expect = 0.0
 Identities = 525/1015 (51%), Positives = 670/1015 (66%), Gaps = 42/1015 (4%)
 Frame = -3

Query: 3244 SWLVCNSSSSTHTGNQNVSKTAIKRIAEKLRSLGYIEEDEHNSNQN-PQPKTIHGSAGEI 3068
            S + C+S+S    G + + ++AI+RIAEKLRSLG++EE   +  +     ++   S GEI
Sbjct: 42   SGIFCSSAS----GRKTLPQSAIQRIAEKLRSLGFVEEKHDSPTRRITGEESGKNSPGEI 97

Query: 3067 FLPFSHQFPKHRVGHTIDSSWSTPENPVPEPGSGSVITRFHELKSEVEKQ-KGSPKREER 2891
            F+P   Q P HRVGHTID+SWSTP  PVP+PGSG+ I+R+HELK   +K+ +   K+EE+
Sbjct: 98   FVPLPKQLPIHRVGHTIDTSWSTPSYPVPKPGSGTAISRYHELKRVWKKETEMERKKEEK 157

Query: 2890 VPTLAELTIPVEEXXXXXXXXXXXXXXLNVGKAGITEGIVNGIHERWRRSEVVKIRCEDL 2711
            VP+LAELT+P  E              L +GKAGITEGIVNGIHERWR +EVVKI CED+
Sbjct: 158  VPSLAELTLPPAELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDI 217

Query: 2710 SRMNMKRTHDLLERKTGGLVIWRSGSSIILYRGANYKYPYFLXXXXXXXXXXXDELSSEF 2531
            SRMNMKRTHD+LE KTGGLVIWRSGS I+LYRG NY+YPYF+            E +S  
Sbjct: 218  SRMNMKRTHDVLETKTGGLVIWRSGSKILLYRGVNYQYPYFVSDRDLAH-----EAASGA 272

Query: 2530 SMVNR--VDSRKDLS-----------------LVNGVGSPSRVRFQLPGEAQLAEEADRL 2408
            S +++  VDSR+  S                 L  GVGSP +VRFQLPGE QL EEADRL
Sbjct: 273  SSMDQGVVDSREKQSIAESSAPSITNKMVKPMLTQGVGSPDKVRFQLPGEVQLVEEADRL 332

Query: 2407 LDGLGPRFTDWWGYDPIPVDADLLSAAVPGYRRPFRLLPYGVKPKLTDDEMTTLRRLSRP 2228
            L+GLGPRFTDWW YDP+PVD DLL A VP YRRPFRLLPYGV PKLTDDEMTT+RRL RP
Sbjct: 333  LEGLGPRFTDWWAYDPLPVDGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRP 392

Query: 2227 LPTHFALGRNKNLQGLAASMVKLWEKCEIAKVAVKRGVQNTNSEMMADELKRLTGGTLIS 2048
            LP HFALGRN+NLQGLA ++VKLWEKCE+AK+AVKRGVQNTNSE+MA+ELK LTGGTLIS
Sbjct: 393  LPCHFALGRNRNLQGLAVAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKWLTGGTLIS 452

Query: 2047 RDSDFIAFYRGKDFLPPAVSTAIEERRKH-------SVHREK--HYPDQTPSIATKSELE 1895
            RD DFI  YRGKDFLP AVS+AIEERR+        SVH  K     ++    A K ++E
Sbjct: 453  RDKDFIVLYRGKDFLPSAVSSAIEERRRQTMIMENSSVHGNKLTENEEEIKPRAVKEDIE 512

Query: 1894 LRTNEPASVDELQETNDQNKRKLVLEQRKVRSKDLAMKRINTKLSMALERKAKAERILAE 1715
            L   +    D +Q           ++ R+  S +  +++ + KLSMALE+KA AE++LA+
Sbjct: 513  LEAKD--QKDHIQTHQ--------MKSRQRNSPEAILEKTSMKLSMALEKKANAEKVLAD 562

Query: 1714 LEKVAEPQKPEIDREGITEEERYMLKKVGLAMKPYVPMGRRGVFDGTVENMHLHWKYREL 1535
            LE    PQ  +ID+EGIT +E+YML+K+GL MKP++ +GRRGVFDGT+ENMHLHWKYREL
Sbjct: 563  LENRESPQLSDIDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYREL 622

Query: 1534 VKLISSDRCIENVHAAARRLEAESGGILVAVERVNRAYAIIVFRGKNYERPVNLRPRTLL 1355
            VK+I ++  IE  H  A  LEAESGGILVAVE V++ YAIIV+RGKNYERP  LRP+TLL
Sbjct: 623  VKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLL 682

Query: 1354 NKKQAMKLSIEAQRRESLKLHVLKLTKNIDQLKLQLIKDDTQMNLVQSTKHKRPNTKFET 1175
            +K++A+K S+EAQRR+SLKLHVLKL+ NI++L  QL++D          +      + ET
Sbjct: 683  SKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVEDSATNETWSDGESSNMMVEEET 742

Query: 1174 SDQPGFVEYSHNQDNAGSEAFANDQEDMEWCGNDSTPLDLNDCMDASSYSKETIRSEKPM 995
             +Q       H +        A ++ ++ +  + S P        +S        SE  +
Sbjct: 743  ENQ-------HTEPEK-----AREKIELGYSSDLSVP--------SSGEENWEDDSEGEV 782

Query: 994  NPFSHHDESAETELKSSFKSALKETHSNTFLDEMGDRDDDYSTSLPMNSTSQDTAEPHIY 815
            +P +    S++   +   +SA  + H    LD   +      T     S+  D + PH  
Sbjct: 783  DPLT---TSSQEYQEDESESASSQRHEGNSLDSTANLSVFAETGSANASSFHDRSLPH-- 837

Query: 814  ANEFIESSNKLNKRKIESPLDIDDVEKGSIVPFG-AAPLSNRDRLVLRKQALKMKKRPVL 638
             N F+ ++ KL      S   I  + +      G    LSNR+RL+LRKQALKMKKRP  
Sbjct: 838  -NSFLNANRKLPGSSTGSGSQISALRERKSENDGLVTDLSNRERLILRKQALKMKKRPPF 896

Query: 637  AIGRNNVVTGVAKTIKTHFKKHPLAIVNVKGRAKGTSIQEVVFKLEQATGAVMVSQEPNK 458
            A+GR+NVVTG+A+T+K HF+K+PLAIVNVKGRA GTS+QEV+ KL++ TGA++VSQEP+K
Sbjct: 897  AVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSVQEVIAKLKEETGALLVSQEPSK 956

Query: 457  VILYRGWIEGEE------PHGVKEKIKARTSTQEM-----VSPQLIEAIRLECGL 326
            VILYRGW   EE       + VK  I   ++   +     VSP LIEAIRLECGL
Sbjct: 957  VILYRGWGAEEEMKSFYPNNNVKSSINLPSTRSFVDDPPHVSPALIEAIRLECGL 1011


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