BLASTX nr result
ID: Akebia25_contig00003530
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00003530
(235 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007209965.1| hypothetical protein PRUPE_ppa004942mg [Prun... 75 7e-12
ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplast... 75 1e-11
ref|XP_004299147.1| PREDICTED: elongation factor Tu, chloroplast... 73 5e-11
sp|Q40450.2|EFTUA_NICSY RecName: Full=Elongation factor TuA, chl... 72 8e-11
ref|XP_006347424.1| PREDICTED: elongation factor TuB, chloroplas... 72 8e-11
dbj|BAA01974.1| chloroplast elongation factor TuA (EF-TuA) [Nico... 72 8e-11
ref|XP_004241515.1| PREDICTED: elongation factor TuA, chloroplas... 71 1e-10
ref|XP_004138088.1| PREDICTED: elongation factor Tu, chloroplast... 70 3e-10
ref|XP_007155487.1| hypothetical protein PHAVU_003G205600g [Phas... 69 5e-10
ref|XP_004171553.1| PREDICTED: elongation factor Tu, chloroplast... 69 5e-10
sp|P46280.1|EFTU2_SOYBN RecName: Full=Elongation factor Tu, chlo... 68 2e-09
ref|XP_003525588.1| PREDICTED: elongation factor Tu, chloroplast... 68 2e-09
ref|XP_006344478.1| PREDICTED: elongation factor TuA, chloroplas... 67 3e-09
gb|ABH07510.1| chloroplast translation elongation factor [Nicoti... 67 3e-09
gb|EYU22188.1| hypothetical protein MIMGU_mgv1a005623mg [Mimulus... 66 4e-09
sp|Q43364.1|EFTUB_NICSY RecName: Full=Elongation factor TuB, chl... 66 4e-09
ref|XP_004501869.1| PREDICTED: elongation factor Tu, chloroplast... 66 6e-09
emb|CBI14942.3| unnamed protein product [Vitis vinifera] 66 6e-09
ref|XP_002277301.1| PREDICTED: elongation factor Tu, chloroplast... 66 6e-09
ref|XP_002298064.1| hypothetical protein POPTR_0001s08770g [Popu... 66 6e-09
>ref|XP_007209965.1| hypothetical protein PRUPE_ppa004942mg [Prunus persica]
gi|462405700|gb|EMJ11164.1| hypothetical protein
PRUPE_ppa004942mg [Prunus persica]
Length = 484
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/56 (66%), Positives = 40/56 (71%)
Frame = +3
Query: 66 LSSSFTNPSSIFWLSXXXXXXXXXXXHRSLTVRAARGKFERNKPHVNIGTIGHVDH 233
LSSSF NPS+I L+ HRS TV+AARGKFER KPHVNIGTIGHVDH
Sbjct: 43 LSSSFLNPSTILHLTPTTTLPLHHHHHRSFTVKAARGKFERKKPHVNIGTIGHVDH 98
>ref|XP_002271032.1| PREDICTED: elongation factor Tu, chloroplastic-like isoform 1
[Vitis vinifera] gi|359488736|ref|XP_003633809.1|
PREDICTED: elongation factor Tu, chloroplastic-like
isoform 2 [Vitis vinifera]
gi|359488738|ref|XP_003633810.1| PREDICTED: elongation
factor Tu, chloroplastic-like isoform 3 [Vitis vinifera]
Length = 487
Score = 75.1 bits (183), Expect = 1e-11
Identities = 42/64 (65%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = +3
Query: 48 TKSAPLLSSSFTNPSSIFWLSXXXXXXXXXXX--HRSLTVRAARGKFERNKPHVNIGTIG 221
TKS P +SSFTN SSIF S RSLTVRAARGKFER KPHVNIGTIG
Sbjct: 38 TKSNPPFASSFTNASSIFRYSVLSSPSTGSSPFRRRSLTVRAARGKFERKKPHVNIGTIG 97
Query: 222 HVDH 233
HVDH
Sbjct: 98 HVDH 101
>ref|XP_004299147.1| PREDICTED: elongation factor Tu, chloroplastic-like [Fragaria vesca
subsp. vesca]
Length = 481
Score = 72.8 bits (177), Expect = 5e-11
Identities = 37/66 (56%), Positives = 42/66 (63%)
Frame = +3
Query: 36 ALSTTKSAPLLSSSFTNPSSIFWLSXXXXXXXXXXXHRSLTVRAARGKFERNKPHVNIGT 215
++ T LSSSF NPS+I L+ RS TV+AARGKFER KPHVNIGT
Sbjct: 30 SIRPTSKLTHLSSSFLNPSTILHLTPTPSTTRHTLTRRSFTVKAARGKFERKKPHVNIGT 89
Query: 216 IGHVDH 233
IGHVDH
Sbjct: 90 IGHVDH 95
>sp|Q40450.2|EFTUA_NICSY RecName: Full=Elongation factor TuA, chloroplastic; Short=EF-TuA;
Flags: Precursor gi|68566318|sp|P68158.1|EFTU_TOBAC
RecName: Full=Elongation factor Tu, chloroplastic;
Short=EF-Tu; Flags: Precursor gi|170344|gb|AAA18546.1|
translation elongation factor EF-Tu [Nicotiana tabacum]
gi|459239|dbj|BAA02027.1| chloroplast elongation factor
TuA(EF-TuA) [Nicotiana sylvestris]
Length = 478
Score = 72.0 bits (175), Expect = 8e-11
Identities = 40/65 (61%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +3
Query: 42 STTKSAPLLSSSFT-NPSSIFWLSXXXXXXXXXXXHRSLTVRAARGKFERNKPHVNIGTI 218
ST S +LSSSFT N S++F S HR TVRAARGKFER KPHVNIGTI
Sbjct: 28 STKPSKLILSSSFTPNCSTLFLHSPATPSSTATHRHRRFTVRAARGKFERKKPHVNIGTI 87
Query: 219 GHVDH 233
GHVDH
Sbjct: 88 GHVDH 92
>ref|XP_006347424.1| PREDICTED: elongation factor TuB, chloroplastic-like [Solanum
tuberosum]
Length = 477
Score = 72.0 bits (175), Expect = 8e-11
Identities = 39/66 (59%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +3
Query: 39 LSTTKSAPLLSSSFT-NPSSIFWLSXXXXXXXXXXXHRSLTVRAARGKFERNKPHVNIGT 215
L + S +LSSSFT PS++F S HR TVRAARGKFER KPHVNIGT
Sbjct: 26 LPSKSSKLILSSSFTPTPSTLFLHSPATTTPSSSTRHRRFTVRAARGKFERKKPHVNIGT 85
Query: 216 IGHVDH 233
IGHVDH
Sbjct: 86 IGHVDH 91
>dbj|BAA01974.1| chloroplast elongation factor TuA (EF-TuA) [Nicotiana sylvestris]
Length = 457
Score = 72.0 bits (175), Expect = 8e-11
Identities = 40/65 (61%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +3
Query: 42 STTKSAPLLSSSFT-NPSSIFWLSXXXXXXXXXXXHRSLTVRAARGKFERNKPHVNIGTI 218
ST S +LSSSFT N S++F S HR TVRAARGKFER KPHVNIGTI
Sbjct: 28 STKPSKLILSSSFTPNCSTLFLHSPATPSSTATHRHRRFTVRAARGKFERKKPHVNIGTI 87
Query: 219 GHVDH 233
GHVDH
Sbjct: 88 GHVDH 92
>ref|XP_004241515.1| PREDICTED: elongation factor TuA, chloroplastic-like [Solanum
lycopersicum]
Length = 518
Score = 71.2 bits (173), Expect = 1e-10
Identities = 43/79 (54%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = +3
Query: 6 ASNGTLRTNRALSTTKSAPL-LSSSFT-NPSSIFWLSXXXXXXXXXXX-HRSLTVRAARG 176
A++ + T+ + +KS+ L LSSSFT NPS++F S HR TVRAARG
Sbjct: 54 AASTKINTSGTVLPSKSSKLILSSSFTPNPSTLFLHSPATTAPSSSSSRHRRFTVRAARG 113
Query: 177 KFERNKPHVNIGTIGHVDH 233
KFER KPHVNIGTIGHVDH
Sbjct: 114 KFERKKPHVNIGTIGHVDH 132
>ref|XP_004138088.1| PREDICTED: elongation factor Tu, chloroplastic-like [Cucumis
sativus]
Length = 478
Score = 70.1 bits (170), Expect = 3e-10
Identities = 43/79 (54%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = +3
Query: 6 ASNGTLRTNRALSTT---KSAPLLSSSFTNPSSIFWLSXXXXXXXXXXXHRSLTVRAARG 176
+S+ + ++ +LS+T K + LSSSF N SSI LS RSLT+RAARG
Sbjct: 21 SSSSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRPLSFSSPSVSRP---RSLTIRAARG 77
Query: 177 KFERNKPHVNIGTIGHVDH 233
KFER KPHVNIGTIGHVDH
Sbjct: 78 KFERKKPHVNIGTIGHVDH 96
>ref|XP_007155487.1| hypothetical protein PHAVU_003G205600g [Phaseolus vulgaris]
gi|561028841|gb|ESW27481.1| hypothetical protein
PHAVU_003G205600g [Phaseolus vulgaris]
Length = 479
Score = 69.3 bits (168), Expect = 5e-10
Identities = 41/76 (53%), Positives = 46/76 (60%)
Frame = +3
Query: 6 ASNGTLRTNRALSTTKSAPLLSSSFTNPSSIFWLSXXXXXXXXXXXHRSLTVRAARGKFE 185
+SN A STT LSSSF +PS++ L+ RS TVRAARGKFE
Sbjct: 26 SSNSLFLKTHAPSTTH----LSSSFIHPSTVLHLAPTPAALR----RRSFTVRAARGKFE 77
Query: 186 RNKPHVNIGTIGHVDH 233
R KPHVNIGTIGHVDH
Sbjct: 78 RKKPHVNIGTIGHVDH 93
>ref|XP_004171553.1| PREDICTED: elongation factor Tu, chloroplastic-like [Cucumis
sativus]
Length = 482
Score = 69.3 bits (168), Expect = 5e-10
Identities = 43/80 (53%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
Frame = +3
Query: 3 TASNGTLRTNRALSTT---KSAPLLSSSFTNPSSIFWLSXXXXXXXXXXXHRSLTVRAAR 173
++S + ++ +LS+T K + LSSSF N SSI LS RSLT+RAAR
Sbjct: 24 SSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRPLSFSSPSVSRP---RSLTIRAAR 80
Query: 174 GKFERNKPHVNIGTIGHVDH 233
GKFER KPHVNIGTIGHVDH
Sbjct: 81 GKFERKKPHVNIGTIGHVDH 100
>sp|P46280.1|EFTU2_SOYBN RecName: Full=Elongation factor Tu, chloroplastic; Short=EF-Tu;
Flags: Precursor gi|949873|emb|CAA61444.1| EF-Tu protein
[Glycine max]
Length = 479
Score = 67.8 bits (164), Expect = 2e-09
Identities = 37/60 (61%), Positives = 41/60 (68%)
Frame = +3
Query: 54 SAPLLSSSFTNPSSIFWLSXXXXXXXXXXXHRSLTVRAARGKFERNKPHVNIGTIGHVDH 233
SA LSSSF +P++I L+ RS TVRAARGKFER KPHVNIGTIGHVDH
Sbjct: 38 SATHLSSSFIHPTTILHLAAANTTTR----RRSFTVRAARGKFERKKPHVNIGTIGHVDH 93
>ref|XP_003525588.1| PREDICTED: elongation factor Tu, chloroplastic-like [Glycine max]
Length = 479
Score = 67.8 bits (164), Expect = 2e-09
Identities = 37/60 (61%), Positives = 41/60 (68%)
Frame = +3
Query: 54 SAPLLSSSFTNPSSIFWLSXXXXXXXXXXXHRSLTVRAARGKFERNKPHVNIGTIGHVDH 233
SA LSSSF +P++I L+ RS TVRAARGKFER KPHVNIGTIGHVDH
Sbjct: 38 SATHLSSSFIHPTTILHLAAANTTTR----RRSFTVRAARGKFERKKPHVNIGTIGHVDH 93
>ref|XP_006344478.1| PREDICTED: elongation factor TuA, chloroplastic-like [Solanum
tuberosum]
Length = 477
Score = 67.0 bits (162), Expect = 3e-09
Identities = 36/64 (56%), Positives = 39/64 (60%)
Frame = +3
Query: 42 STTKSAPLLSSSFTNPSSIFWLSXXXXXXXXXXXHRSLTVRAARGKFERNKPHVNIGTIG 221
+T S +LSSSFT S +L R TVRAARGKFER KPHVNIGTIG
Sbjct: 28 ATKPSKLILSSSFTPNLSTLFLHSPAATSPATHHQRRFTVRAARGKFERKKPHVNIGTIG 87
Query: 222 HVDH 233
HVDH
Sbjct: 88 HVDH 91
>gb|ABH07510.1| chloroplast translation elongation factor [Nicotiana attenuata]
Length = 311
Score = 66.6 bits (161), Expect = 3e-09
Identities = 40/78 (51%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 TASNGTLRTNRALSTTKSAPLLSSSFT-NPSSIFWLSXXXXXXXXXXXHRSLTVRAARGK 179
++S + T T S +LSSSFT PS++F S R TVRAARGK
Sbjct: 24 SSSTSSGNTAAVFPTNSSKLILSSSFTPTPSTLFLHSPTTTPSTTHP--RRFTVRAARGK 81
Query: 180 FERNKPHVNIGTIGHVDH 233
FER KPHVNIGTIGHVDH
Sbjct: 82 FERKKPHVNIGTIGHVDH 99
>gb|EYU22188.1| hypothetical protein MIMGU_mgv1a005623mg [Mimulus guttatus]
Length = 476
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/71 (53%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Frame = +3
Query: 39 LSTTKSAP------LLSSSFTNPSSIFWLSXXXXXXXXXXXHRSLTVRAARGKFERNKPH 200
LSTT P +LSSSFT S+ +L R +VRAARGKFER KPH
Sbjct: 20 LSTTNPNPSKPTKIILSSSFTPSSTTLFLHPTTTAAAAATPLRRFSVRAARGKFERKKPH 79
Query: 201 VNIGTIGHVDH 233
VNIGTIGHVDH
Sbjct: 80 VNIGTIGHVDH 90
>sp|Q43364.1|EFTUB_NICSY RecName: Full=Elongation factor TuB, chloroplastic; Short=EF-TuB;
Flags: Precursor gi|459241|dbj|BAA02028.1| chloroplast
elongation factor TuB(EF-TuB) [Nicotiana sylvestris]
Length = 485
Score = 66.2 bits (160), Expect = 4e-09
Identities = 39/78 (50%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 TASNGTLRTNRALSTTKSAPLLSSSFT-NPSSIFWLSXXXXXXXXXXXHRSLTVRAARGK 179
++S+ + T + S +LSSSFT PS++F S R TVRAARGK
Sbjct: 24 SSSSSSSNTAAVFPSNSSKLILSSSFTPTPSTLFLHSPTTTPSTTHP--RRFTVRAARGK 81
Query: 180 FERNKPHVNIGTIGHVDH 233
FER KPHVNIGTIGHVDH
Sbjct: 82 FERKKPHVNIGTIGHVDH 99
>ref|XP_004501869.1| PREDICTED: elongation factor Tu, chloroplastic-like [Cicer
arietinum]
Length = 491
Score = 65.9 bits (159), Expect = 6e-09
Identities = 41/79 (51%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Frame = +3
Query: 6 ASNGTLRTNRALSTTK---SAPLLSSSFTNPSSIFWLSXXXXXXXXXXXHRSLTVRAARG 176
AS +N STT + LSSSF NPS+I L+ S TVRAARG
Sbjct: 29 ASASISNSNTFRSTTHPKLTLTRLSSSFLNPSTILHLTPSSQQQRTNRP--SFTVRAARG 86
Query: 177 KFERNKPHVNIGTIGHVDH 233
KFER KPH+NIGTIGHVDH
Sbjct: 87 KFERKKPHLNIGTIGHVDH 105
>emb|CBI14942.3| unnamed protein product [Vitis vinifera]
Length = 377
Score = 65.9 bits (159), Expect = 6e-09
Identities = 38/64 (59%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +3
Query: 45 TTKSAPLLSSSF-TNPSSIFWLSXXXXXXXXXXXHRSLTVRAARGKFERNKPHVNIGTIG 221
T K LSSSF + PS+ F L+ RS TVRAARGKFERNKPH+NIGTIG
Sbjct: 78 TRKHPSNLSSSFLSKPSTTFLLTPTTTATTTQ--RRSFTVRAARGKFERNKPHLNIGTIG 135
Query: 222 HVDH 233
HVDH
Sbjct: 136 HVDH 139
>ref|XP_002277301.1| PREDICTED: elongation factor Tu, chloroplastic-like [Vitis
vinifera]
Length = 486
Score = 65.9 bits (159), Expect = 6e-09
Identities = 38/64 (59%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +3
Query: 45 TTKSAPLLSSSF-TNPSSIFWLSXXXXXXXXXXXHRSLTVRAARGKFERNKPHVNIGTIG 221
T K LSSSF + PS+ F L+ RS TVRAARGKFERNKPH+NIGTIG
Sbjct: 39 TRKHPSNLSSSFLSKPSTTFLLTPTTTATTTQ--RRSFTVRAARGKFERNKPHLNIGTIG 96
Query: 222 HVDH 233
HVDH
Sbjct: 97 HVDH 100
>ref|XP_002298064.1| hypothetical protein POPTR_0001s08770g [Populus trichocarpa]
gi|222845322|gb|EEE82869.1| hypothetical protein
POPTR_0001s08770g [Populus trichocarpa]
Length = 483
Score = 65.9 bits (159), Expect = 6e-09
Identities = 38/80 (47%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +3
Query: 3 TASNGTLRTNRALSTTKSAP---LLSSSFTNPSSIFWLSXXXXXXXXXXXHRSLTVRAAR 173
T ++ T +L T P +LSSSF +P + HR+ TVRAAR
Sbjct: 22 TTTSSTSTPTFSLKPTSKLPSKSILSSSFLSP----FTPTSPTSPFTTTRHRTFTVRAAR 77
Query: 174 GKFERNKPHVNIGTIGHVDH 233
GKFER KPHVNIGTIGHVDH
Sbjct: 78 GKFERKKPHVNIGTIGHVDH 97