BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00002452
         (1157 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   419   e-115
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...   414   e-113
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...   411   e-112
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   410   e-112
ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis tha...   409   e-111
gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidops...   409   e-111
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   408   e-111
ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   407   e-111
ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   407   e-111
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   407   e-111
ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Caps...   402   e-109
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   399   e-109
ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago trunc...   399   e-108
emb|CBI21038.3| unnamed protein product [Vitis vinifera]              399   e-108
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   399   e-108
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    398   e-108
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   397   e-108
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis...   397   e-108
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    397   e-108
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     396   e-107

>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score =  419 bits (1078), Expect = e-115
 Identities = 195/292 (66%), Positives = 240/292 (82%)
 Frame = +1

Query: 1    QDIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVS 180
            QDII+FF KNMVN+ +G ICNAHVVHADLSEYGA D+ C+ LAELAATAVDF KTGKVVS
Sbjct: 909  QDIIEFFAKNMVNDNLGAICNAHVVHADLSEYGATDKNCLTLAELAATAVDFPKTGKVVS 968

Query: 181  MPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPEDITYDT 360
            MP  LKPK+YPDFM KE +Q+YKS KILGRLYR+IKD  D D+ + S+++  P DI YD+
Sbjct: 969  MPPYLKPKMYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNLVPGDIPYDS 1028

Query: 361  VLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMK 540
             LE+ G++D+I DAW+QKC+YDGQL  LL QYKV  EEE+VTGHIWSMPKY+SRKQG++K
Sbjct: 1029 DLEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMPKYSSRKQGELK 1088

Query: 541  EKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLEL 720
            +++KHSY++L +EF+ +FE +  +  +L + EK  LYEQKASAWYQV YHP WVKKSLEL
Sbjct: 1089 DRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWVKKSLEL 1148

Query: 721  RDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
            +DPDG G   MLSFAWI A+YL RIK+RHR T N+D+ KP+NSLA+YLA R+
Sbjct: 1149 QDPDGAGTSVMLSFAWIAADYLARIKIRHRETGNVDSAKPVNSLAKYLADRM 1200


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
            gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
            6 [Gossypium hirsutum]
          Length = 1196

 Score =  414 bits (1063), Expect = e-113
 Identities = 200/292 (68%), Positives = 234/292 (80%)
 Frame = +1

Query: 1    QDIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVS 180
            +DII+FF+KNMVNE +G+ICNAHVVH+DLSE+GA DEKCI LAELAA AVDF KTGK+VS
Sbjct: 905  KDIIEFFSKNMVNEHLGSICNAHVVHSDLSEHGASDEKCIHLAELAAIAVDFPKTGKIVS 964

Query: 181  MPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPEDITYDT 360
            MP  LKPKLYPDFM KE FQ+YKSNKILGRLYR IKD  D D+   S+++    DI YD 
Sbjct: 965  MPAQLKPKLYPDFMGKEEFQSYKSNKILGRLYRYIKDAYDKDVSESSELNFGASDINYDA 1024

Query: 361  VLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMK 540
             LEI GSAD+I DAW +KC+YDGQL+ LL QYKV  EEE+VTG IWSMPKY S+K GD+K
Sbjct: 1025 DLEITGSADYITDAWAKKCSYDGQLIGLLKQYKVKREEEVVTGQIWSMPKYASKKLGDLK 1084

Query: 541  EKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLEL 720
            EK+ HSY +L +EF+ LFEN+  +  +L EDEK  LYE+KASAWYQVTYHP+WV+K LE 
Sbjct: 1085 EKLGHSYGSLRKEFRQLFENMDSEFEQLNEDEKNKLYERKASAWYQVTYHPEWVQKKLEF 1144

Query: 721  RDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
            + PDGD    MLSFAWI A+YL RIKVRH+ TENLD  KP+NSL RYLA RI
Sbjct: 1145 QKPDGDEGVVMLSFAWIAADYLARIKVRHQGTENLDFAKPVNSLVRYLADRI 1196


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
            gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
            6 [Theobroma cacao]
          Length = 1197

 Score =  411 bits (1056), Expect = e-112
 Identities = 199/292 (68%), Positives = 235/292 (80%)
 Frame = +1

Query: 1    QDIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVS 180
            +DIIDFF KNMVNE +GTICNAHVVHADLSEYGALDEKCI LAELAATAVDF KTGK+VS
Sbjct: 906  KDIIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAELAATAVDFPKTGKIVS 965

Query: 181  MPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPEDITYDT 360
            MP +LKPKLYPDFM KE +Q+YKS KILGRLYR IKD  D D+   S+I+    DI YDT
Sbjct: 966  MPANLKPKLYPDFMGKEEYQSYKSRKILGRLYRHIKDVYDEDLSESSEINLDSPDINYDT 1025

Query: 361  VLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMK 540
             LE+ GSAD+IDDAW +KC+YD QL+ LLGQYKV  EEE+VTGHIWSMPKY SRK GD+K
Sbjct: 1026 DLEVTGSADYIDDAWVKKCSYDRQLIGLLGQYKVKREEEVVTGHIWSMPKYTSRKLGDLK 1085

Query: 541  EKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLEL 720
            EK+ HSY AL +EF+ +FE++  +  +L EDE+  LYE+KASAWYQVTYHP+WV+K LEL
Sbjct: 1086 EKLGHSYGALRKEFRQIFESMDSEIEQLNEDERNELYERKASAWYQVTYHPKWVEKKLEL 1145

Query: 721  RDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
            +  DG     MLSFAWI A+YL RIK+R + T N+D  KP+NSL +YLA +I
Sbjct: 1146 QKSDGADPVVMLSFAWIAADYLARIKIRSQGTGNVDFSKPVNSLVKYLADKI 1197


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
            sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
            sinensis]
          Length = 1197

 Score =  410 bits (1054), Expect = e-112
 Identities = 197/292 (67%), Positives = 234/292 (80%)
 Frame = +1

Query: 1    QDIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVS 180
            +DII+FF K+MVNE +GTICNAHVVHAD SEYGALDE CI LAELAATAVDF KTGK+V+
Sbjct: 906  RDIIEFFAKHMVNENLGTICNAHVVHADHSEYGALDENCILLAELAATAVDFPKTGKIVT 965

Query: 181  MPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPEDITYDT 360
            MP  LKPKLYPDFM KE +Q+YKSNKILGRLYR+ KD  D DI   S++   P DI YDT
Sbjct: 966  MPAHLKPKLYPDFMGKEAYQSYKSNKILGRLYRQSKDAYDEDISVSSEVDINPVDIHYDT 1025

Query: 361  VLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMK 540
             LE+P S DFI DAWNQKC+YDGQL  LL QYKV+ EEE+VTGHIWSMPKYNSRKQG++K
Sbjct: 1026 DLEVPESVDFIADAWNQKCSYDGQLNGLLEQYKVNREEELVTGHIWSMPKYNSRKQGELK 1085

Query: 541  EKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLEL 720
            E++KHSY AL +EF+ +FE +  D   L+EDEK  L+E+KASAWYQVTYHP+WVKKSL+L
Sbjct: 1086 ERLKHSYSALRKEFRQVFEKMDSDCELLSEDEKNALFERKASAWYQVTYHPEWVKKSLDL 1145

Query: 721  RDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
            ++ D   +  +LSFAWI  +YL RIK+R R   N+D  KP+N LARY+A RI
Sbjct: 1146 QEQDSARSVVLLSFAWIANDYLARIKIRCREMANIDTSKPVNYLARYVADRI 1197


>ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis thaliana]
            gi|75337188|sp|Q9SG02.1|RDR6_ARATH RecName:
            Full=RNA-dependent RNA polymerase 6; Short=AtRDRP6;
            AltName: Full=Protein SILENCING DEFECTIVE 1; AltName:
            Full=Protein SUPPRESSOR OF GENE SILENCING 2; AltName:
            Full=RNA-directed RNA polymerase 6
            gi|12324444|gb|AAG52184.1|AC012329_11 putative
            RNA-directed RNA polymerase; 73997-69985 [Arabidopsis
            thaliana] gi|6899955|emb|CAB71285.1| RNA-directed RNA
            polymerase-like protein [Arabidopsis thaliana]
            gi|8164028|gb|AAF73959.1| SGS2 [Arabidopsis thaliana]
            gi|332645029|gb|AEE78550.1| RNA-dependent RNA polymerase
            6 [Arabidopsis thaliana]
          Length = 1196

 Score =  409 bits (1051), Expect = e-111
 Identities = 193/292 (66%), Positives = 236/292 (80%)
 Frame = +1

Query: 1    QDIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVS 180
            QDIIDFF +N+ NE++GTICNAHVVHAD SEYGA+DE+C+ LAELAATAVDF KTGK+VS
Sbjct: 905  QDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKTGKIVS 964

Query: 181  MPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPEDITYDT 360
            MP  LKPKLYPDFM KE +QTYKSNKILGRLYR++K+  D D  + S+ S  P  I YD 
Sbjct: 965  MPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEESTDPSAIPYDA 1024

Query: 361  VLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMK 540
            VLEIPG  D I +AW  KC YDGQL+ LLGQYKV  EEE+VTGHIWSMPKY S+KQG++K
Sbjct: 1025 VLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELK 1084

Query: 541  EKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLEL 720
            E++KHSY++L +EF+ +FE    D   L+E+EK +LYE+KASAWY VTYHP+WVKKSLEL
Sbjct: 1085 ERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLEL 1144

Query: 721  RDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
            +DPD     AMLSFAWI A+YL RIK+R R   ++D+ KP++SLA++LAQR+
Sbjct: 1145 QDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196


>gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidopsis thaliana]
          Length = 1196

 Score =  409 bits (1050), Expect = e-111
 Identities = 193/292 (66%), Positives = 236/292 (80%)
 Frame = +1

Query: 1    QDIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVS 180
            QDIIDFF +N+ NE++GTICNAHVVHAD SEYGA+DE+C+ LAELAATAVDF KTGK+VS
Sbjct: 905  QDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKTGKIVS 964

Query: 181  MPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPEDITYDT 360
            MP  LKPKLYPDFM KE +QTYKSNKILGRLYR +K+  D D  + S+ S  P  I YD 
Sbjct: 965  MPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRPVKEVYDEDAEASSEESTDPSAIPYDA 1024

Query: 361  VLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMK 540
            VLEIPG  D I +AW  KC+YDGQL+ LLGQYKV  EEE+VTGHIWSMPKY S+KQG++K
Sbjct: 1025 VLEIPGFEDLIPEAWGHKCSYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELK 1084

Query: 541  EKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLEL 720
            E++KHSY++L +EF+ +FE    D   L+E+EK +LYE+KASAWY VTYHP+WVKKSLEL
Sbjct: 1085 ERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLEL 1144

Query: 721  RDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
            +DPD     AMLSFAWI A+YL RIK+R R   ++D+ KP++SLA++LAQR+
Sbjct: 1145 QDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  408 bits (1048), Expect = e-111
 Identities = 196/298 (65%), Positives = 236/298 (79%), Gaps = 6/298 (2%)
 Frame = +1

Query: 1    QDIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVS 180
            QDIIDFF KNMVNE +G ICNAHVVHADLSEYGALDE CI+LAELAATAVDF KTGK+V+
Sbjct: 906  QDIIDFFAKNMVNENLGAICNAHVVHADLSEYGALDENCIKLAELAATAVDFPKTGKLVT 965

Query: 181  MPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDG------TDGDILSPSKISCAPE 342
            MP  LKPKLYPDFM KE +Q+Y SNKILGRLYR++KD        D D  + S+++    
Sbjct: 966  MPPHLKPKLYPDFMGKEDYQSYNSNKILGRLYRQVKDDYNDDDDDDDDAATSSELNLVRG 1025

Query: 343  DITYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSR 522
            DI YD  LE+ GS+D+I DAW+QKC+YDGQL  LL QYKV  EEE+VTGHIWSMPK NSR
Sbjct: 1026 DIPYDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTGHIWSMPKCNSR 1085

Query: 523  KQGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWV 702
            KQG++KE++K SYH+L +EF+ +FE +  D  +LTEDEK +LYEQKASAWYQV YHP+WV
Sbjct: 1086 KQGELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWV 1145

Query: 703  KKSLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
             KS+EL++PD  G  +MLSFAWI A+YL RIK+R R  + +D  KP+NSL +YLA RI
Sbjct: 1146 NKSMELQEPDAAGCASMLSFAWIAADYLARIKIRCRGFDGVDTSKPVNSLVKYLADRI 1203


>ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Cicer
            arietinum] gi|502132369|ref|XP_004501326.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X3 [Cicer
            arietinum]
          Length = 1201

 Score =  407 bits (1045), Expect = e-111
 Identities = 198/299 (66%), Positives = 238/299 (79%), Gaps = 7/299 (2%)
 Frame = +1

Query: 1    QDIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVS 180
            +DIIDFF KNMVNE +G+ICNAHVVHAD S+YGALDEKCI LAELAATAVDF KTGK+V+
Sbjct: 904  RDIIDFFVKNMVNEHLGSICNAHVVHADCSDYGALDEKCIHLAELAATAVDFPKTGKLVT 963

Query: 181  MPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPEDITYDT 360
            MP  LKPKLYPDFM KE  Q+YKS KILGRLYR+IKD  D DI +P  ++CA  DI YDT
Sbjct: 964  MPPHLKPKLYPDFMGKEHHQSYKSKKILGRLYRQIKDAYDKDIDAPD-LNCASSDIHYDT 1022

Query: 361  VLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMK 540
             LE+PGSADFI DAW QKC+YDGQL  LLGQYKV TEEE+VTG IWSMPKYNSRKQG++K
Sbjct: 1023 DLEVPGSADFISDAWYQKCSYDGQLSGLLGQYKVKTEEEVVTGQIWSMPKYNSRKQGELK 1082

Query: 541  EKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLEL 720
            E++KHSY AL +EF+  FE +  D  +L+++EK +LYEQKASAWYQV YHP+WVK+S +L
Sbjct: 1083 ERLKHSYSALKKEFRQTFEKLNLDIGELSDEEKNLLYEQKASAWYQVAYHPKWVKRSHDL 1142

Query: 721  R-------DPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
            +       + D  G   MLSF WI  +YL R K+R RR EN D+ KP++SLA+YL++R+
Sbjct: 1143 KVKSSDNQEADSLGNMVMLSFPWIAVDYLARTKIRRRRVENFDSVKPVDSLAKYLSERL 1201


>ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Cicer
            arietinum]
          Length = 1247

 Score =  407 bits (1045), Expect = e-111
 Identities = 198/299 (66%), Positives = 238/299 (79%), Gaps = 7/299 (2%)
 Frame = +1

Query: 1    QDIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVS 180
            +DIIDFF KNMVNE +G+ICNAHVVHAD S+YGALDEKCI LAELAATAVDF KTGK+V+
Sbjct: 950  RDIIDFFVKNMVNEHLGSICNAHVVHADCSDYGALDEKCIHLAELAATAVDFPKTGKLVT 1009

Query: 181  MPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPEDITYDT 360
            MP  LKPKLYPDFM KE  Q+YKS KILGRLYR+IKD  D DI +P  ++CA  DI YDT
Sbjct: 1010 MPPHLKPKLYPDFMGKEHHQSYKSKKILGRLYRQIKDAYDKDIDAPD-LNCASSDIHYDT 1068

Query: 361  VLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMK 540
             LE+PGSADFI DAW QKC+YDGQL  LLGQYKV TEEE+VTG IWSMPKYNSRKQG++K
Sbjct: 1069 DLEVPGSADFISDAWYQKCSYDGQLSGLLGQYKVKTEEEVVTGQIWSMPKYNSRKQGELK 1128

Query: 541  EKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLEL 720
            E++KHSY AL +EF+  FE +  D  +L+++EK +LYEQKASAWYQV YHP+WVK+S +L
Sbjct: 1129 ERLKHSYSALKKEFRQTFEKLNLDIGELSDEEKNLLYEQKASAWYQVAYHPKWVKRSHDL 1188

Query: 721  R-------DPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
            +       + D  G   MLSF WI  +YL R K+R RR EN D+ KP++SLA+YL++R+
Sbjct: 1189 KVKSSDNQEADSLGNMVMLSFPWIAVDYLARTKIRRRRVENFDSVKPVDSLAKYLSERL 1247


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score =  407 bits (1045), Expect = e-111
 Identities = 193/293 (65%), Positives = 235/293 (80%), Gaps = 1/293 (0%)
 Frame = +1

Query: 1    QDIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVS 180
            QDI++FF KNM NE +G ICNAHVV ADLSEYGALDEKC+ LAELAATAVDF KTGK+VS
Sbjct: 906  QDIVEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPKTGKIVS 965

Query: 181  MPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDG-TDGDILSPSKISCAPEDITYD 357
            MP  LKPK+YPDFM KE  Q+YKS KILGRLYR+IKD   D D+ + S+++    DI YD
Sbjct: 966  MPSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSELNFVRGDIPYD 1025

Query: 358  TVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDM 537
              LE+ G+ DFI DAW++KC+YDGQL  LL QYKV  EEE+VTGH+WSMPK +SRKQGD+
Sbjct: 1026 LDLEVLGATDFISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPKGSSRKQGDL 1085

Query: 538  KEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLE 717
            KE++KHSY+ L REF+ +FE +  D  +L +DEK +LYE+KASAWYQVTYHP W++KSLE
Sbjct: 1086 KERLKHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHPHWIQKSLE 1145

Query: 718  LRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
            L+D DG G   MLSFAWI A+YL RIK+RH R  N+D+ KP+NSLA+YLA R+
Sbjct: 1146 LQDSDGAGISVMLSFAWIAADYLARIKIRHSRIGNVDSAKPVNSLAKYLADRM 1198


>ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Capsella rubella]
            gi|482559225|gb|EOA23416.1| hypothetical protein
            CARUB_v10016597mg [Capsella rubella]
          Length = 1197

 Score =  402 bits (1033), Expect = e-109
 Identities = 193/293 (65%), Positives = 235/293 (80%), Gaps = 1/293 (0%)
 Frame = +1

Query: 1    QDIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVS 180
            QDIIDFF +NM NE +GTICNAHVVHAD SEYGA+DE C+ LAELAATAVDF KTGK+VS
Sbjct: 905  QDIIDFFARNMANESLGTICNAHVVHADRSEYGAMDEDCLLLAELAATAVDFPKTGKIVS 964

Query: 181  MPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPEDITYDT 360
            +P  LKPKLYPDFM KE +QTYKSNKILGRLYR++K+  D D  + S+ +    DI YDT
Sbjct: 965  IPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEENPDLSDIPYDT 1024

Query: 361  VLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMK 540
             LEIPG AD I +AW  KC+YDGQL+ LLGQYKV  EEE+VTGHIWSMPKY S+KQGD+K
Sbjct: 1025 DLEIPGFADLIPEAWRHKCSYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGDLK 1084

Query: 541  EKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLEL 720
            E++KHSY++L +EF+ +FE    D   L+++EK +LYE+KASAWY VTYHP+WV KSLEL
Sbjct: 1085 ERLKHSYNSLKKEFRKVFEETIPDHENLSDEEKNILYEKKASAWYHVTYHPKWVTKSLEL 1144

Query: 721  RDPDGDGAPA-MLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
            +DPD     A MLSFAWI A+YL RIK+R R   N+D+ KP++SLA++LAQR+
Sbjct: 1145 QDPDESSTHAVMLSFAWIAADYLARIKIRSREIGNMDSAKPVDSLAKFLAQRL 1197


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  399 bits (1026), Expect = e-109
 Identities = 190/291 (65%), Positives = 232/291 (79%)
 Frame = +1

Query: 4    DIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVSM 183
            DIIDFF+KNMV E +G ICNAHVVHADLSE+GALDEKC++LAELAA AVDF KTGK+V+M
Sbjct: 907  DIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTM 966

Query: 184  PQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPEDITYDTV 363
            P  LKPK+YPDFM KE FQ+YKS KILG+LYR++KD  D +    + +   P+DI YDT 
Sbjct: 967  PFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTT 1026

Query: 364  LEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMKE 543
            LEI GS  FIDDAWN KC+YDGQL  LLGQYKV+ EEE+VTGHIWSMPKY+++KQG++KE
Sbjct: 1027 LEILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKE 1086

Query: 544  KIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLELR 723
            ++KH+Y+ L +EF+N+FE +  D   L +DEK  +YE+KASAWYQVTYHP WV +SLEL+
Sbjct: 1087 RLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQ 1146

Query: 724  DPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
             PD   +  MLSFAWI A+YL RIK+RHR     D+ KPINSL RYLA +I
Sbjct: 1147 IPDAVSSTVMLSFAWIAADYLARIKIRHRGLPYSDSTKPINSLGRYLADKI 1197


>ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago truncatula]
            gi|355492457|gb|AES73660.1| Rna-dependent RNA polymerase
            [Medicago truncatula]
          Length = 1188

 Score =  399 bits (1025), Expect = e-108
 Identities = 192/299 (64%), Positives = 237/299 (79%), Gaps = 7/299 (2%)
 Frame = +1

Query: 1    QDIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVS 180
            QDIIDFF +NMVNE++G+ICNAHVVHAD S+YGALDE C+ LAELAATAVDF KTGK+V+
Sbjct: 891  QDIIDFFVRNMVNEQLGSICNAHVVHADSSDYGALDENCVHLAELAATAVDFPKTGKLVT 950

Query: 181  MPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPEDITYDT 360
            MP +LKPKLYPDFM KE  Q+YKS KILGRLYR+IKD  D DI +P + +C   DI YDT
Sbjct: 951  MPSNLKPKLYPDFMGKEHHQSYKSKKILGRLYRRIKDAYDKDIDAP-EFNCVSSDILYDT 1009

Query: 361  VLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMK 540
             LE+PGS++FI DAW Q+C+YDGQL  LLGQYKV TEEE+VTG IWSMPKYNSRKQG++K
Sbjct: 1010 DLEVPGSSEFIADAWEQRCSYDGQLSGLLGQYKVKTEEEVVTGQIWSMPKYNSRKQGELK 1069

Query: 541  EKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLEL 720
            E++KHSY AL +EF+ +FE +  D  +L++ EK +LYEQKASAWYQVTYHP+WVKKSL+L
Sbjct: 1070 ERLKHSYSALKKEFRQIFEKLKSDVGELSDKEKNLLYEQKASAWYQVTYHPKWVKKSLDL 1129

Query: 721  -------RDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
                   +  D  G   MLSF WI  +YL   K RHRR ++ D+ K ++SLA+YL++R+
Sbjct: 1130 QLKSSDNQSADSLGNMVMLSFPWIAVDYLACTKTRHRRVKDFDSTKQVDSLAKYLSERL 1188


>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  399 bits (1024), Expect = e-108
 Identities = 192/292 (65%), Positives = 232/292 (79%), Gaps = 1/292 (0%)
 Frame = +1

Query: 4    DIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVSM 183
            DIIDFFTKNMVNE +G ICNAHVVHAD SEYGALDE C+ LAE AATAVDF KTGK+V++
Sbjct: 744  DIIDFFTKNMVNENLGAICNAHVVHADRSEYGALDEACLDLAERAATAVDFPKTGKLVTL 803

Query: 184  PQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPEDITYDTV 363
            P  LKPK+YPDFM KE FQTY+SNKILG++YR+IKD  + D+   S+     + + +D  
Sbjct: 804  PPYLKPKMYPDFMGKEEFQTYRSNKILGKMYRQIKDAYNEDVSESSEQIFGADKVPFDED 863

Query: 364  LEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMKE 543
            L IPGSADFI+DAW  KC+YDGQL  LLGQYKV  EEE+VTGH+WSMPKY SRKQG++ E
Sbjct: 864  LGIPGSADFINDAWIHKCSYDGQLNGLLGQYKVKREEEVVTGHVWSMPKYKSRKQGELTE 923

Query: 544  KIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLELR 723
            ++KH+Y +L +EF+ +FE +  D  +LT+DEK  LYEQKASAWYQVTYHP WVKKSLEL+
Sbjct: 924  RLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQ 983

Query: 724  DPDG-DGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
            +PD   G   MLSFAWI A+YL RIK+R + T N+D+ KPINSLAR+L  RI
Sbjct: 984  NPDEVFGERVMLSFAWITADYLARIKIRRKGTGNVDSSKPINSLARFLVDRI 1035


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  399 bits (1024), Expect = e-108
 Identities = 192/292 (65%), Positives = 232/292 (79%), Gaps = 1/292 (0%)
 Frame = +1

Query: 4    DIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVSM 183
            DIIDFFTKNMVNE +G ICNAHVVHAD SEYGALDE C+ LAE AATAVDF KTGK+V++
Sbjct: 906  DIIDFFTKNMVNENLGAICNAHVVHADRSEYGALDEACLDLAERAATAVDFPKTGKLVTL 965

Query: 184  PQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPEDITYDTV 363
            P  LKPK+YPDFM KE FQTY+SNKILG++YR+IKD  + D+   S+     + + +D  
Sbjct: 966  PPYLKPKMYPDFMGKEEFQTYRSNKILGKMYRQIKDAYNEDVSESSEQIFGADKVPFDED 1025

Query: 364  LEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMKE 543
            L IPGSADFI+DAW  KC+YDGQL  LLGQYKV  EEE+VTGH+WSMPKY SRKQG++ E
Sbjct: 1026 LGIPGSADFINDAWIHKCSYDGQLNGLLGQYKVKREEEVVTGHVWSMPKYKSRKQGELTE 1085

Query: 544  KIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLELR 723
            ++KH+Y +L +EF+ +FE +  D  +LT+DEK  LYEQKASAWYQVTYHP WVKKSLEL+
Sbjct: 1086 RLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQ 1145

Query: 724  DPDG-DGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
            +PD   G   MLSFAWI A+YL RIK+R + T N+D+ KPINSLAR+L  RI
Sbjct: 1146 NPDEVFGERVMLSFAWITADYLARIKIRRKGTGNVDSSKPINSLARFLVDRI 1197


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  398 bits (1022), Expect = e-108
 Identities = 189/291 (64%), Positives = 231/291 (79%)
 Frame = +1

Query: 4    DIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVSM 183
            DIIDFF+KNMV E +G ICNAHVVHADLSE+GALDEKC++LAELAA AVDF KTGK+V+M
Sbjct: 907  DIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTM 966

Query: 184  PQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPEDITYDTV 363
            P  LKPK+YPDFM KE FQ+YKS KILG+LYR++KD  D +    + +   P+DI YD+ 
Sbjct: 967  PFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDST 1026

Query: 364  LEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMKE 543
            LEI GS  FIDDAWN KC+YDGQL  LLGQYKV+ EEE+VTGHIWSMPKY+++KQG++KE
Sbjct: 1027 LEILGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKE 1086

Query: 544  KIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLELR 723
            ++KH+Y+ L +EF+N+FE +  D   L +DEK  +YE+KASAWYQVTYHP WV +SLEL+
Sbjct: 1087 RLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQ 1146

Query: 724  DPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
             PD      MLSFAWI A+YL RIK+RHRR +  D+ KPINSL RYL   I
Sbjct: 1147 LPDAVSNTVMLSFAWIAADYLARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score =  397 bits (1019), Expect = e-108
 Identities = 187/292 (64%), Positives = 236/292 (80%), Gaps = 1/292 (0%)
 Frame = +1

Query: 4    DIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVSM 183
            DI++FF KNM+NE +GTICNAHVVHAD S++GALDE CIQL+ELAATAVDF KTGK+V+M
Sbjct: 906  DIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTM 965

Query: 184  PQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDG-TDGDILSPSKISCAPEDITYDT 360
            P  LKPKLYPDFM KE  Q+YKS KILG++YR+I+D   D D+++  +++  P D+ YD 
Sbjct: 966  PPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDV 1025

Query: 361  VLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMK 540
             LE+ G+ DFI +AW+QKC+YDGQL  LLGQYKV+ EEE+VTGHIWSMPKY SRKQG++K
Sbjct: 1026 DLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGELK 1085

Query: 541  EKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLEL 720
            EK+KHSY  L ++F+ +FEN+G +  +LT DE+  LYE+KASAWYQV YHP W+KKSLEL
Sbjct: 1086 EKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLEL 1145

Query: 721  RDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
            R+PD   A  MLSF WI A+YL RIK++ RRT++ D  KPINSLA YL+ R+
Sbjct: 1146 REPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197


>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
            gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
            6 [Cucumis sativus]
          Length = 1197

 Score =  397 bits (1019), Expect = e-108
 Identities = 187/292 (64%), Positives = 236/292 (80%), Gaps = 1/292 (0%)
 Frame = +1

Query: 4    DIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVSM 183
            DI++FF KNM+NE +GTICNAHVVHAD S++GALDE CIQL+ELAATAVDF KTGK+V+M
Sbjct: 906  DIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTM 965

Query: 184  PQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDG-TDGDILSPSKISCAPEDITYDT 360
            P  LKPKLYPDFM KE  Q+YKS KILG++YR+I+D   D D+++  +++  P D+ YD 
Sbjct: 966  PPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDV 1025

Query: 361  VLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMK 540
             LE+ G+ DFI +AW+QKC+YDGQL  LLGQYKV+ EEE+VTGHIWSMPKY SRKQG++K
Sbjct: 1026 DLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGELK 1085

Query: 541  EKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLEL 720
            EK+KHSY  L ++F+ +FEN+G +  +LT DE+  LYE+KASAWYQV YHP W+KKSLEL
Sbjct: 1086 EKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLEL 1145

Query: 721  RDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
            R+PD   A  MLSF WI A+YL RIK++ RRT++ D  KPINSLA YL+ R+
Sbjct: 1146 REPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  397 bits (1019), Expect = e-108
 Identities = 188/291 (64%), Positives = 232/291 (79%)
 Frame = +1

Query: 4    DIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVSM 183
            DIIDFF+KNMV E +G ICNAHVVHADLSE+GALDEKC++LAELAA AVDF KTGK+V+M
Sbjct: 907  DIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTM 966

Query: 184  PQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPEDITYDTV 363
            P  LKPK+YPDFM KE FQ+YKS KILG+LYR++KD  D +    + +   P+DI YDT 
Sbjct: 967  PFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTT 1026

Query: 364  LEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMKE 543
            L IPGS  FIDDAWN KC+YDGQL  LLGQYKV+ EEE+VTGHIWSMPKY+++KQG++KE
Sbjct: 1027 LVIPGSTVFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKE 1086

Query: 544  KIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLELR 723
            ++KH+Y+ L +EF+N+FE +  D   L +DEK  +YE+KASAWYQVTY+P WV +SLEL+
Sbjct: 1087 RLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQ 1146

Query: 724  DPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
             PD   +  MLSFAWI A+YL RIK+RHR  +  D+ KPINSL RYL  +I
Sbjct: 1147 LPDAISSTVMLSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  396 bits (1017), Expect = e-107
 Identities = 189/291 (64%), Positives = 230/291 (79%)
 Frame = +1

Query: 4    DIIDFFTKNMVNEKVGTICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKTGKVVSM 183
            DIIDFF+KNMV E +G ICNAHVVHADLSE+GALDEKC++LAELAA AVDF KTGK+V+M
Sbjct: 907  DIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTM 966

Query: 184  PQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPEDITYDTV 363
            P  LKPK+YPDFM KE FQ+YKS KILG+LYR++KD  D +    + +   P+DI YDT 
Sbjct: 967  PFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTT 1026

Query: 364  LEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRKQGDMKE 543
            LEI GS  FIDDAWN KC+YDGQL  LLGQYKV+ EEE+VTG+IWSMPKYN++KQG++KE
Sbjct: 1027 LEILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGYIWSMPKYNAKKQGELKE 1086

Query: 544  KIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVKKSLELR 723
            ++KH+Y+ L +EF+N+FE +  D   L +DEK  +YE+KASAWYQVTYHP WV +SLEL+
Sbjct: 1087 RLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQ 1146

Query: 724  DPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDARKPINSLARYLAQRI 876
              D      MLSFAWI A+YL RIK+RHRR +  D+ KPINSL RYL   I
Sbjct: 1147 LADAVSNTVMLSFAWIAADYLARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197