BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00002186
         (5087 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...  2036   0.0  
emb|CBI29879.3| unnamed protein product [Vitis vinifera]             2019   0.0  
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...  1863   0.0  
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...  1848   0.0  
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...  1839   0.0  
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...  1832   0.0  
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr...  1827   0.0  
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1826   0.0  
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ...  1816   0.0  
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...  1807   0.0  
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas...  1774   0.0  
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...  1761   0.0  
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...  1750   0.0  
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...  1738   0.0  
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...  1729   0.0  
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me...  1707   0.0  
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps...  1693   0.0  
gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus...  1670   0.0  
ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr...  1667   0.0  
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab...  1658   0.0  

>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score = 2036 bits (5274), Expect = 0.0
 Identities = 1074/1708 (62%), Positives = 1272/1708 (74%), Gaps = 58/1708 (3%)
 Frame = -2

Query: 5047 VTKMAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGP 4868
            VT     T G TE VEAV FSF T+EEVR  SFKKIT+P++LD++ RP P GLYDPA+G 
Sbjct: 47   VTAPVTATSGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGS 106

Query: 4867 LEDRTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQV 4688
            +++ T C+SCGQRSF CPGHCGHIDLVS VYNPLLF +L NLLQ+TCFFC+HF+ +   V
Sbjct: 107  IDENTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLV 166

Query: 4687 KKCALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVK---GLPRQVPNYNSKNLKQ 4517
            +K   QLELI KGD+VGAK                D   V     +     +  S +LKQ
Sbjct: 167  QKYVSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQ 226

Query: 4516 HSWTSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHV-NMPNKYTRANIIK 4340
              WTSLQ  EAMS++D  +  +  +CK C AK+P++T P FGWFH+  + +  TRAN+I+
Sbjct: 227  QEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIR 286

Query: 4339 GSKLNKLSMGKAKRNSTGKEENANDSSAMGD-VDSTDAESSGVVYDGTPDSAQKV---KG 4172
            GSKL +     A+  S+ + EN ND    GD VD+ +  SS    DG  D+  K    KG
Sbjct: 287  GSKLERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKRLERKG 346

Query: 4171 GYLYPEFLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSM 3992
                 EF+KQK FFSGPLLPSEV++ M+ LWENE +LCS I DI QERL  SG K  YSM
Sbjct: 347  AQAPIEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSM 406

Query: 3991 FFIEALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKIVPRWF 3812
            FF+E +LVPPIKFRPPSKG  SVMEHPQTVLL KV+ +NI+L N H N SERSKI+ RW 
Sbjct: 407  FFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWM 466

Query: 3811 DLQQSINVLFGNSKTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPY 3635
            DLQQSINVLF     AG  + +  +GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPY
Sbjct: 467  DLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPY 526

Query: 3634 LAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNR 3455
            LAVNEIGIPPYFALRLTYPE+VTPWNV KLRDAIING E+HPGATHYVDKL+TVKL  N+
Sbjct: 527  LAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNK 586

Query: 3454 KIRTSISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHV 3275
            K+R SISRKL SSRGVVAQPG++ ++E EGK+VYRHLQDGDIVLVNRQPTLHKPSIMAHV
Sbjct: 587  KMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHV 646

Query: 3274 VRVLSGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGE 3095
            VRVL GEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQYI+P+ G+
Sbjct: 647  VRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGD 706

Query: 3094 PTRGLIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEA 2915
            P RGLIQDHIVSAVLLTKKDTFLT E+YN LLYSSG+S+ +  F   KPG+KVSV++SE 
Sbjct: 707  PIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSGSGSFIG-KPGKKVSVLDSED 765

Query: 2914 EIEPILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKSDEAN- 2738
            E++P+LPAI KP P+W+GKQVIT++LNHI  TRG +P T EK GKI +EYFG + DE   
Sbjct: 766  EMQPLLPAIWKPEPLWSGKQVITAVLNHI--TRGRKPFTTEKDGKIPREYFGSEIDEKKS 823

Query: 2737 ------------------------LLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTA 2630
                                    LLI KNELV GVIDKAQF +YGLVH VQE YGS+TA
Sbjct: 824  GKGKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTA 883

Query: 2629 GILLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKE 2450
            GILLSVLSRLFTVFLQMHGFTCGVDDLLI    D+ R  +L +S+ IGE  H KFIG+  
Sbjct: 884  GILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNH 943

Query: 2449 GDIDQMELQVEIEKAIRIKGESAITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCL 2270
            G ID ++LQVE+EK I   GE+AIT+LDRMM +ELN+LTS VN +L  KGL+KPFPKNCL
Sbjct: 944  GKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCL 1003

Query: 2269 SLMTTSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDR 2090
            SLMTT+GAKGS VNF+QISS LGQQ LEGKRVPRMVSGKTLPCFPPWD A+RAGGFI+DR
Sbjct: 1004 SLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDR 1063

Query: 2089 FLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSV 1910
            FLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYD+TVRD+DGS+
Sbjct: 1064 FLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSI 1123

Query: 1909 VQFCYGEDGVDVHKTSFVTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQK 1733
            VQF YG+DGVDVH+TSF+T+F+ LA N+ V+ E+ G        K + YI++LP+ L +K
Sbjct: 1124 VQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQ-----DGKFNGYIQKLPKELRKK 1178

Query: 1732 TKDFLSSLTKQQRHSLHLRKRKDFXXXXXXXXXXXLAQPGEPVGVIAAQSVGQPSTQMTL 1553
            TK F+    ++++   +++K+KDF           LAQPGEPVGV+AAQSVG+PSTQMTL
Sbjct: 1179 TKKFIEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTL 1238

Query: 1552 NTFHHAGLGAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVS 1373
            NTFH AG G +NVTLGIPRLQEILM A+  I+TP+MTCPL MG++ DDA+RLAA LKKV+
Sbjct: 1239 NTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVT 1298

Query: 1372 VADIVESIEVCVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGE 1193
            VADI ES+EV +VPF+V+ HQ  SIYKLKMKLY P LYPP + I+LEDC +T+E +FV E
Sbjct: 1299 VADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRE 1358

Query: 1192 LEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXX 1013
            LE+ IQ HL++LSKISGIKN +  ++S +SK+TDE  +G     +               
Sbjct: 1359 LEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASG---DGLAGGNGDEDDDGEDDG 1415

Query: 1012 XXXDLGVDAQKRRRQATDEMDYEDAXXXXXXXXXXXEQSVGFESEIDQVDVEDDNSVDGE 833
               DLG+DAQKR++QA+DEMDY D+           E S G   EID V+ E + S + E
Sbjct: 1416 GAEDLGLDAQKRKQQASDEMDYGDS----EGEPDEGEPSAGLTEEIDLVEDEVEISNNEE 1471

Query: 832  IQIFDGEDESRRGP-VXXXXXXXXXXXXXXXXXXXXXXXKDNDRAVFVEAKGLEFEVHFR 656
            + I D +DE  + P                         KD DRA+ V+AKG  FEVHFR
Sbjct: 1472 VGISDPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFR 1531

Query: 655  FTNEPHILLAQIAQKTAKKVYIKRSGNIEQCSVI---------------KHDN------R 539
            FTNEPHILLAQIAQK A KVYI+ SG I+ C VI               K +N      +
Sbjct: 1532 FTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKRENIPGEEKK 1591

Query: 538  DTPALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLHTFGVEAARATIIKEVMNVFEPYG 359
              PALQTAGV+F AFW MQD+LD+R + SN++HA+L+TFGVEAARATIIKEV NVF  YG
Sbjct: 1592 KLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYG 1651

Query: 358  ISVDIRHLSLIADFMTHSGGYRPMSRY-GMAVSTSPFSKMSFETASTFIVEAAYHGEVDD 182
            + V+IRHLSLIADFMTHSGGYRPM+R+ G+A S SPFSKM+FETAS FIVEAA HG  D+
Sbjct: 1652 VKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDN 1711

Query: 181  LESPSARICLGLPVKMGTGCFDLMQKLQ 98
            LES SARICLGLPVKMGTGCFDLMQK++
Sbjct: 1712 LESASARICLGLPVKMGTGCFDLMQKIE 1739


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 2019 bits (5231), Expect = 0.0
 Identities = 1066/1704 (62%), Positives = 1263/1704 (74%), Gaps = 57/1704 (3%)
 Frame = -2

Query: 5038 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 4859
            MA+  EG TE VEAV FSF T+EEVR  SFKKIT+P++LD++ RP P GLYDPA+G +++
Sbjct: 1    MAHVIEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 60

Query: 4858 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 4679
             T C+SCGQRSF CPGHCGHIDLVS VYNPLLF +L NLLQ+TCFFC+HF+ +   V+K 
Sbjct: 61   NTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKY 120

Query: 4678 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVK---GLPRQVPNYNSKNLKQHSW 4508
              QLELI KGD+VGAK                D   V     +     +  S +LKQ  W
Sbjct: 121  VSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEW 180

Query: 4507 TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHV-NMPNKYTRANIIKGSK 4331
            TSLQ  EAMS++D  +  +  +CK C AK+P++T P FGWFH+  + +  TRAN+I+GSK
Sbjct: 181  TSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSK 240

Query: 4330 LNKLSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKV---KGGYLY 4160
            L +                      +  VD+ +  SS    DG  D+  K    KG    
Sbjct: 241  LER---------------------PLNGVDTDETHSSIAPTDGIQDTVTKRLERKGAQAP 279

Query: 4159 PEFLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIE 3980
             EF+KQK FFSGPLLPSEV++ M+ LWENE +LCS I DI QERL  SG K  YSMFF+E
Sbjct: 280  IEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLE 339

Query: 3979 ALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKIVPRWFDLQQ 3800
             +LVPPIKFRPPSKG  SVMEHPQTVLL KV+ +NI+L N H N SERSKI+ RW DLQQ
Sbjct: 340  TILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQ 399

Query: 3799 SINVLFGNSKTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVN 3623
            SINVLF     AG  + +  +GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVN
Sbjct: 400  SINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVN 459

Query: 3622 EIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRT 3443
            EIGIPPYFALRLTYPE+VTPWNV KLRDAIING E+HPGATHYVDKL+TVKL  N+K+R 
Sbjct: 460  EIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRI 519

Query: 3442 SISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL 3263
            SISRKL SSRGVVAQPG++ ++E EGK+VYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL
Sbjct: 520  SISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL 579

Query: 3262 SGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRG 3083
             GEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQYI+P+ G+P RG
Sbjct: 580  KGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRG 639

Query: 3082 LIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEP 2903
            LIQDHIVSAVLLTKKDTFLT E+YN LLYSSG+S+ +  F   KPG+KVSV++SE E++P
Sbjct: 640  LIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSGSGSFIG-KPGKKVSVLDSEDEMQP 698

Query: 2902 ILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKSDEAN----- 2738
            +LPAI KP P+W+GKQVIT++LNHI  TRG +P T EK GKI +EYFG + DE       
Sbjct: 699  LLPAIWKPEPLWSGKQVITAVLNHI--TRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGK 756

Query: 2737 --------------------LLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILL 2618
                                LLI KNELV GVIDKAQF +YGLVH VQE YGS+TAGILL
Sbjct: 757  DPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILL 816

Query: 2617 SVLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDID 2438
            SVLSRLFTVFLQMHGFTCGVDDLLI    D+ R  +L +S+ IGE  H KFIG+  G ID
Sbjct: 817  SVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKID 876

Query: 2437 QMELQVEIEKAIRIKGESAITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCLSLMT 2258
             ++LQVE+EK I   GE+AIT+LDRMM +ELN+LTS VN +L  KGL+KPFPKNCLSLMT
Sbjct: 877  PVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMT 936

Query: 2257 TSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTG 2078
            T+GAKGS VNF+QISS LGQQ LEGKRVPRMVSGKTLPCFPPWD A+RAGGFI+DRFLTG
Sbjct: 937  TTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTG 996

Query: 2077 LRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFC 1898
            L PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYD+TVRD+DGS+VQF 
Sbjct: 997  LHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFN 1056

Query: 1897 YGEDGVDVHKTSFVTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQKTKDF 1721
            YG+DGVDVH+TSF+T+F+ LA N+ V+ E+ G        K + YI++LP+ L +KTK F
Sbjct: 1057 YGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQ-----DGKFNGYIQKLPKELRKKTKKF 1111

Query: 1720 LSSLTKQQRHSLHLRKRKDFXXXXXXXXXXXLAQPGEPVGVIAAQSVGQPSTQMTLNTFH 1541
            +    ++++   +++K+KDF           LAQPGEPVGV+AAQSVG+PSTQMTLNTFH
Sbjct: 1112 IEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFH 1171

Query: 1540 HAGLGAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADI 1361
             AG G +NVTLGIPRLQEILM A+  I+TP+MTCPL MG++ DDA+RLAA LKKV+VADI
Sbjct: 1172 LAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADI 1231

Query: 1360 VESIEVCVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEE 1181
             ES+EV +VPF+V+ HQ  SIYKLKMKLY P LYPP + I+LEDC +T+E +FV ELE+ 
Sbjct: 1232 TESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDA 1291

Query: 1180 IQAHLIMLSKISGIKNIVLSAQSGSSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXD 1001
            IQ HL++LSKISGIKN +  ++S +SK+TDE  +G     +                  D
Sbjct: 1292 IQNHLLLLSKISGIKNFLPDSRSMASKETDEDASG---DGLAGGNGDEDDDGEDDGGAED 1348

Query: 1000 LGVDAQKRRRQATDEMDYEDAXXXXXXXXXXXEQSVGFESEIDQVDVEDDNSVDGEIQIF 821
            LG+DAQKR++QA+DEMDY D+           E S G   EID V+ E + S + E+ I 
Sbjct: 1349 LGLDAQKRKQQASDEMDYGDS----EGEPDEGEPSAGLTEEIDLVEDEVEISNNEEVGIS 1404

Query: 820  DGEDESRRGP-VXXXXXXXXXXXXXXXXXXXXXXXKDNDRAVFVEAKGLEFEVHFRFTNE 644
            D +DE  + P                         KD DRA+ V+AKG  FEVHFRFTNE
Sbjct: 1405 DPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNE 1464

Query: 643  PHILLAQIAQKTAKKVYIKRSGNIEQCSVI---------------KHDN------RDTPA 527
            PHILLAQIAQK A KVYI+ SG I+ C VI               K +N      +  PA
Sbjct: 1465 PHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKRENIPGEEKKKLPA 1524

Query: 526  LQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLHTFGVEAARATIIKEVMNVFEPYGISVD 347
            LQTAGV+F AFW MQD+LD+R + SN++HA+L+TFGVEAARATIIKEV NVF  YG+ V+
Sbjct: 1525 LQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVN 1584

Query: 346  IRHLSLIADFMTHSGGYRPMSRY-GMAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESP 170
            IRHLSLIADFMTHSGGYRPM+R+ G+A S SPFSKM+FETAS FIVEAA HG  D+LES 
Sbjct: 1585 IRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESA 1644

Query: 169  SARICLGLPVKMGTGCFDLMQKLQ 98
            SARICLGLPVKMGTGCFDLMQK++
Sbjct: 1645 SARICLGLPVKMGTGCFDLMQKIE 1668


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score = 1863 bits (4825), Expect = 0.0
 Identities = 1022/1710 (59%), Positives = 1202/1710 (70%), Gaps = 67/1710 (3%)
 Frame = -2

Query: 5026 TEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLC 4847
            ++GATES++++ FSFLT+EEVR  SF KITNP LLD + RP P GLYDPA+GPL +RT+C
Sbjct: 8    SKGATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTIC 67

Query: 4846 KSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQL 4667
            K+CGQRS  CPGHCGHIDLVSPVYNPLLF  L  LLQRTCF C+HFR+ R QV+KC  QL
Sbjct: 68   KTCGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQL 127

Query: 4666 ELIIKGDIVGAKXXXXXXXXXXXXXXXXD--RVRVKGLPRQVPNYNSKNLKQHSWTSLQY 4493
            ELI+KGDIVGAK                D        +   V   + ++ +Q  WTSLQ+
Sbjct: 128  ELIVKGDIVGAKRLESVSPSEALYPEESDLSHESCPTIHSGVQCNDGEHTRQQGWTSLQF 187

Query: 4492 SEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNKLS 4316
            +EAMS+L+  +  +  +CK C + NP IT P FGWFH + M +   RAN+I G +L  L 
Sbjct: 188  TEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQLGGLL 247

Query: 4315 MGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQKE 4136
                             S   G  D  DA   G  + GT    +K +   L  EF +QK 
Sbjct: 248  ----------------GSEIEGTTDVEDAAEPGDQHSGTKKHKKKERKEVL--EFTRQKS 289

Query: 4135 FFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIK 3956
             FS  LLPSEVK  ++LLW+NE ++CS I D+QQ+       K   +MFF+E +LVPPIK
Sbjct: 290  TFSKQLLPSEVKEKLELLWKNEARICSFISDLQQQEFG--KRKAGPAMFFLETILVPPIK 347

Query: 3955 FRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKIVPRWFDLQQSINVLFGN 3776
            FRPP+KGGDSVMEHPQTVLL+KV+ SNISL + H+N+ E SKIV RW DLQQSIN LF +
Sbjct: 348  FRPPTKGGDSVMEHPQTVLLSKVLQSNISLGDAHINK-EHSKIVRRWLDLQQSINTLF-D 405

Query: 3775 SKTA---GLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 3605
            SKTA   G RE  A GICQLLEKKEG+FRQKMMGKRVNYACRSVISPDPY+ VNEIGIPP
Sbjct: 406  SKTAKGPGQREG-APGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYIGVNEIGIPP 464

Query: 3604 YFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKL 3425
             FA++LTYPERVTPWN+ KLR+A+ING+E HPGATHYVDKL+  KLPP RK R SISRKL
Sbjct: 465  CFAVKLTYPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPARKARISISRKL 524

Query: 3424 HSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTL 3245
             SSRG V Q GK  E E EGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEKTL
Sbjct: 525  PSSRGAVTQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTL 584

Query: 3244 RMHYANCS-TYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDH 3068
            RMHYANCS TYNADFDGDEMNVHFPQDE+SRAEA+NIVNANNQ++ P++GEP RGLIQDH
Sbjct: 585  RMHYANCSITYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGEPLRGLIQDH 644

Query: 3067 IVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAI 2888
            IVSAVLLTKKDTFL+ +E+N LLYSSGVS    + F  +PGQKV    SE EI+ + PAI
Sbjct: 645  IVSAVLLTKKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQKVLWSRSEDEIQTLPPAI 704

Query: 2887 LKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------------------ 2762
             KP P+WTGKQVIT++LNHI  T    P TVEK  KI   +F                  
Sbjct: 705  WKPKPLWTGKQVITAILNHI--TSDHPPFTVEKDAKIPSNFFKSRANEDKPCQEEKSDKD 762

Query: 2761 ---GRKSDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTV 2591
                ++ DE  +L+ KNELV GVIDK QFGEYGLVHTV E  GS TAGILLSVLSRLFT 
Sbjct: 763  APAEKEPDEEKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLSVLSRLFTA 822

Query: 2590 FLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEG--DIDQMELQVE 2417
            +LQMHGFTCGVDDLLI+   D ER K+L+  +K GE  H  FIG K+    ID + +Q+ 
Sbjct: 823  YLQMHGFTCGVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIKIDPVAMQLN 882

Query: 2416 IEKAIRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKG 2240
            IEK IR  G+SA+  LDR MS+ELN  TS  V S L   GLLKP  KNC+SLMTTSGAKG
Sbjct: 883  IEKTIRSDGDSALAYLDRQMSNELNTKTSSGVISNLLSDGLLKPSGKNCISLMTTSGAKG 942

Query: 2239 SLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEY 2060
            S VNF QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD A+R+GG+ITDRFLTGLRPQEY
Sbjct: 943  SKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARSGGYITDRFLTGLRPQEY 1002

Query: 2059 YFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGV 1880
            YFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLK+ YDHTVRDADGSVVQF YGEDGV
Sbjct: 1003 YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKIGYDHTVRDADGSVVQFYYGEDGV 1062

Query: 1879 DVHKTSFVTKFDTLAANQ-RVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSSLTK 1703
            DVH+TSF+ KF  LA NQ  + +R G          + YI ELPEAL++K   FL   + 
Sbjct: 1063 DVHQTSFIAKFKELALNQDMIYKRSGGQLG----AFNSYISELPEALKEKADRFLDDFSI 1118

Query: 1702 QQRHSLHLRKRKDFXXXXXXXXXXXLAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGA 1523
              R + +L KR+D            LAQPGEPVGV+AAQSVG+PSTQMTLNTFH AG G 
Sbjct: 1119 MGRIASNLVKREDLYNLMKQKFLLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGE 1178

Query: 1522 MNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEV 1343
            MNVTLGIPRLQEILM AS  I+TP+MTCPL  G+T +DA  LA  L+KV+VADIVES+EV
Sbjct: 1179 MNVTLGIPRLQEILMTASIDIKTPIMTCPLQEGRTNEDADHLADKLRKVTVADIVESMEV 1238

Query: 1342 CVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLI 1163
             VVPF+++   V  IYKLKMKLYRP  YP +++I++ED  +T+EV+F+ ELE+ IQ H+ 
Sbjct: 1239 SVVPFAIQDGGVCRIYKLKMKLYRPAHYPQYANISVEDWEETLEVVFLRELEDAIQNHMF 1298

Query: 1162 MLSKISGIKNIVLSAQSGSSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXDLGVDAQ 983
            +LS+ISGIK+ +  ++S +S + DE   G  S +                   DLG+DAQ
Sbjct: 1299 LLSRISGIKDFLPESRSRASGEADEDVAGDMSHR---EERDDDNDDDDGERADDLGLDAQ 1355

Query: 982  KRRRQATDEMDYEDA--XXXXXXXXXXXEQSVGFESEIDQVDVEDDNSVDGEIQIFDGED 809
            KR+ QATDEMDY+D              E+  GFESEIDQ D E + S D  +     E 
Sbjct: 1356 KRKLQATDEMDYDDGFEEELNEGESTASEEESGFESEIDQGDNETEISNDVMLDNEASET 1415

Query: 808  ESRRGP-----------VXXXXXXXXXXXXXXXXXXXXXXXKDNDRAVFVEAKGLEFEVH 662
               R P                                   KD DRA+FVEA+ + FEVH
Sbjct: 1416 LPLRKPSKPKSKKKAAESPSHGEKSKDKKKKPKAKRKSRISKDFDRAIFVEARKMHFEVH 1475

Query: 661  FRFTNEPHILLAQIAQKTAKKVYIKRSGNIEQCSV--------------------IKHDN 542
            F+FTNEPHILLA+IAQKTAKKVYI+  G IEQC V                    +K D 
Sbjct: 1476 FKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVTDCKESQVIYYGKDPKERVDLKPDV 1535

Query: 541  RD-TPALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLHTFGVEAARATIIKEVMNVFEP 365
            ++  PAL   GV+F  FW MQD LD+R I SN+IHA+L T+GVEAAR TII+E+ +VF+ 
Sbjct: 1536 KEKVPALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKTYGVEAARETIIREINHVFKS 1595

Query: 364  YGISVDIRHLSLIADFMTHSGGYRPMSRY-GMAVSTSPFSKMSFETASTFIVEAAYHGEV 188
            YGI+V  RHLSLIADFMTH+GGYRPMSR  G+A S SPFSKMSFETAS FIVEAA HGE+
Sbjct: 1596 YGIAVSNRHLSLIADFMTHTGGYRPMSRMGGIAESISPFSKMSFETASKFIVEAALHGEI 1655

Query: 187  DDLESPSARICLGLPVKMGTGCFDLMQKLQ 98
            D+LE+PSARICLGLPVKMGTG FDLMQKL+
Sbjct: 1656 DNLETPSARICLGLPVKMGTGSFDLMQKLE 1685


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score = 1848 bits (4787), Expect = 0.0
 Identities = 1003/1714 (58%), Positives = 1209/1714 (70%), Gaps = 67/1714 (3%)
 Frame = -2

Query: 5038 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 4859
            MA  TEGAT+SVEAV F+F+T EEVR  SF K+TN  LLD + RP P GLYD  +GPLED
Sbjct: 1    MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60

Query: 4858 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 4679
            RT CKSCG     CPGHCGHIDLVSP+YNPLLF  L  LLQR CFFCYHFR  + +V++C
Sbjct: 61   RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120

Query: 4678 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVKGLPRQVPNYNSKNLKQHSWTSL 4499
              QL+LI  GDIVGAK                +  +  G       +NS+ +K   WTSL
Sbjct: 121  VSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESGSIV----HNSEAVKPKEWTSL 176

Query: 4498 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 4322
            Q  EAMS+L+  +  +  +CK C AKNP IT P FGW H+N M     R N+I+G K+  
Sbjct: 177  QLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVD 236

Query: 4321 LSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKV--KGGYLYPEFL 4148
                +A    +G E+  + SS+   VD  + ++S + + G+  +  K   K   +  EF+
Sbjct: 237  TFSDEA---GSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFM 293

Query: 4147 KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 3968
            KQK  FSGPLLPSEVK   KLLWENE +LCS+I DIQQ+     G K  YSMFF+E +LV
Sbjct: 294  KQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILV 350

Query: 3967 PPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKIVPR-WFDLQQSIN 3791
            PPIKFR P+KGGDSVMEHPQTVLL+KV+ +NISL N + N  + SK V R W DLQQS+N
Sbjct: 351  PPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVN 410

Query: 3790 VLFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI 3611
            +LF +        ++++GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGI
Sbjct: 411  LLFDSKTAMSQGRDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGI 470

Query: 3610 PPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISR 3431
            PPYFALRLTYPERVTPWNV KLR+AIING+E HPGATHYVDKL+T +LPP++K R SISR
Sbjct: 471  PPYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISR 530

Query: 3430 KLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEK 3251
            KL SSRG +AQPGKNL++E EGK+V RHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEK
Sbjct: 531  KLPSSRGAIAQPGKNLDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEK 590

Query: 3250 TLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQD 3071
            T+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ P++GEP R LIQD
Sbjct: 591  TIRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPIRALIQD 650

Query: 3070 HIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPA 2891
            HIVSAVLLTK+DTFL+ +E+N LLYSSGVS+ A++ FS KPGQKV V  SE  + PI+PA
Sbjct: 651  HIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGMLPIIPA 710

Query: 2890 ILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF----------------- 2762
            ILKP P+WTGKQVI+S+L+HI  TRG  P TV K+ KI +++F                 
Sbjct: 711  ILKPKPLWTGKQVISSVLSHI--TRGRPPFTVGKTAKIPRDFFRNRRNKNKQSSREENQP 768

Query: 2761 ---GRKS-----------DEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGI 2624
               G+K+           DE  +LI +N+LV GVIDKAQF +YGLVHTVQE YGS+TAGI
Sbjct: 769  KNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGI 828

Query: 2623 LLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD 2444
            LLSV SRLFTVFLQMHGFTCGVDDLLI+++ D+ER K+L+  +K   E H +  G K   
Sbjct: 829  LLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGVKVNS 888

Query: 2443 IDQMELQVEIEKAIRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLS 2267
              + ELQ+EIE+ IR  GE+A+T LDR M S LN+ +S  V +EL  +GL+K   +NC+S
Sbjct: 889  --ETELQLEIERTIRRDGETALTALDRKMISVLNENSSKGVLTELLSEGLVKSMGENCIS 946

Query: 2266 LMTTSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRF 2087
            LMTTSGAKGS VNF QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD A+RAGGFI+DRF
Sbjct: 947  LMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRF 1006

Query: 2086 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVV 1907
            L+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLK+ YDHTVRDADGS+V
Sbjct: 1007 LSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIV 1066

Query: 1906 QFCYGEDGVDVHKTSFVTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQKT 1730
            QF YGEDG+DVH+TSF+ KF+ LA NQ ++ E+L     +     DD  K LP+ L  K 
Sbjct: 1067 QFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQLGEP----DDSDKILPDGLRSKA 1122

Query: 1729 KDFLSSLTKQQRHSLHLRKRKDFXXXXXXXXXXXLAQPGEPVGVIAAQSVGQPSTQMTLN 1550
            + F+    K+ +H     K KDF           LAQPGEPVGV+AAQSVG+PSTQMTLN
Sbjct: 1123 EQFIREEIKKYQHQKI--KPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLN 1180

Query: 1549 TFHHAGLGAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSV 1370
            TFH AG G MNVTLGIPRLQEILM AS  I+TPVMTCPL  GKT +DA  LA  +KK++V
Sbjct: 1181 TFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITV 1240

Query: 1369 ADIVESIEVCVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGEL 1190
            ADI+ES+EV V PF+V    + SIYKLKM L +P+ Y   SDIT++DC   ++V+F+ EL
Sbjct: 1241 ADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLREL 1300

Query: 1189 EEEIQAHLIMLSKISGIKNIVLSAQSGSSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXX 1010
            E+ IQ HL++LSKISGIK  +  +Q  +S + DE  +  +S++                 
Sbjct: 1301 EDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDDADDEER 1360

Query: 1009 XXDLGVDAQKRRRQATDEMDYEDAXXXXXXXXXXXEQSVGFESEIDQVDVE--------- 857
              DLG+DAQK+++Q TDEMDYED                  ESEID  + E         
Sbjct: 1361 AEDLGLDAQKQKQQTTDEMDYED---DSEVEQNEGASLAALESEIDMSEDETGTIQINMI 1417

Query: 856  -DDNSVDGEIQIFDGEDESRRGPVXXXXXXXXXXXXXXXXXXXXXXXKDNDRAVFVEAKG 680
              DN  D EI       E+R  P                        K++DRA+F   +G
Sbjct: 1418 GSDNGKD-EISQSSPNLENRSNP--KSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIRG 1474

Query: 679  LEFEVHFRFTNEPHILLAQIAQKTAKKVYIKRSGNIEQCSVIK----------------- 551
            L FEVHF+  NEPHILLAQIA+KTAKKVYI+  G I+QC V                   
Sbjct: 1475 LCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKKRK 1534

Query: 550  --HDNRDTPALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLHTFGVEAARATIIKEVMN 377
               D     AL T GV+F AFW M+D +D+R + SN IHA+L+T+GVEAAR TII+E+ +
Sbjct: 1535 SPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREISH 1594

Query: 376  VFEPYGISVDIRHLSLIADFMTHSGGYRPMSRY-GMAVSTSPFSKMSFETASTFIVEAAY 200
            VF  YGI+V+IRHL+LIADFMTHSG YRPMSR  G+A S SPFSKMSFETAS FIVEAA 
Sbjct: 1595 VFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAAK 1654

Query: 199  HGEVDDLESPSARICLGLPVKMGTGCFDLMQKLQ 98
            HG VD+LE+PS+RICLGLPVKMGTG FDLMQK++
Sbjct: 1655 HGLVDNLETPSSRICLGLPVKMGTGSFDLMQKVE 1688


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
            sinensis]
          Length = 1715

 Score = 1839 bits (4763), Expect = 0.0
 Identities = 997/1744 (57%), Positives = 1223/1744 (70%), Gaps = 97/1744 (5%)
 Frame = -2

Query: 5038 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 4859
            M  TTE  TESV+AV FSFLT+EEVR  SF K+  P+LLD +GRP P GLYDP +GPL++
Sbjct: 1    MNQTTEVTTESVKAVWFSFLTDEEVRKQSFLKLKEPLLLDRVGRPLPGGLYDPILGPLDE 60

Query: 4858 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 4679
             + CK+CGQR F CPGH GHIDLV PVYNPLLF +L+ LL+R CFFC+HF+ +R +V+KC
Sbjct: 61   TSSCKTCGQRQFLCPGHFGHIDLVVPVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKC 120

Query: 4678 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVKGLPRQVP--NY-NSKNLKQHSW 4508
              +LELIIKGDI+ AK                D           P  NY N +NLK   W
Sbjct: 121  VRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKSSCSMVTPRGNYDNVRNLKPQEW 180

Query: 4507 TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSK 4331
            TSLQ++EA   L + +  + T+C  C AKNP+I+ P FGW H+N MP+   RAN+I+G  
Sbjct: 181  TSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCN 240

Query: 4330 LNKLSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQK--VKGGYLYP 4157
            L +   G       G+EE   D  A  DVD+ +  S    + GT D+A +   KG    P
Sbjct: 241  LGETFSG-------GEEEK--DLGASSDVDAPETHSFNGTFPGTQDTAARRHQKGSGAVP 291

Query: 4156 E-FLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIE 3980
              F KQK+ FSGPLLPS+VK+ ++ LWENE +LCS I D+QQ+     G K  +S+FF+ 
Sbjct: 292  SGFKKQKDLFSGPLLPSDVKDIIEKLWENEFELCSFISDMQQQGF---GKKAGHSIFFLG 348

Query: 3979 ALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKI-VPRWFDLQ 3803
            A+LVPPIKFR PSKGGDSVMEHPQTVLL+KV+ +NI L N +VN+ + +KI V RW +LQ
Sbjct: 349  AVLVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQANIYLANAYVNQPDNAKIIVTRWMNLQ 408

Query: 3802 QSINVLFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVN 3623
            QS+NVLF     AG R+ MA+GICQLLEKKEG+FRQK+MGKRVNYACRSVISPDPYLAVN
Sbjct: 409  QSVNVLFDGKNAAGQRD-MASGICQLLEKKEGLFRQKLMGKRVNYACRSVISPDPYLAVN 467

Query: 3622 EIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRT 3443
            EIGIPPYFALRLTYPERVTPWNV KLRD+IINGAE+HPGATHY+DKL+T++LPPN+K+R 
Sbjct: 468  EIGIPPYFALRLTYPERVTPWNVVKLRDSIINGAEIHPGATHYLDKLSTMRLPPNKKMRI 527

Query: 3442 SISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL 3263
            SI+RKL +SRG + QPGK+ ++E EGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL
Sbjct: 528  SIARKLDTSRGAIVQPGKDSDNEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVL 587

Query: 3262 SGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRG 3083
             GEKTLRMHYANCSTYNADFDGDEMNVHFPQDE+SRAEA+NIVNANNQY+ P++G+P R 
Sbjct: 588  KGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQYVRPSNGDPLRS 647

Query: 3082 LIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEP 2903
            LIQDHIVSA LLTKKDTFL  +E+  LLYSSGVS++    F+ KPGQ+V +  SE E+ P
Sbjct: 648  LIQDHIVSAALLTKKDTFLNRDEFCQLLYSSGVSSSGLGSFTGKPGQRVLISRSEQEVLP 707

Query: 2902 ILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------------- 2762
            +LPAI KP P+WTGKQVIT++LNHI  TRG  P  VE+ GK+ +++F             
Sbjct: 708  LLPAIWKPEPLWTGKQVITAVLNHI--TRGRPPFVVERGGKLPQDFFKTRFNADKQSDRK 765

Query: 2761 ------------------GRKSD-----------------------EANLLIQKNELVHG 2705
                              G+K +                       E  LLI KN+LV G
Sbjct: 766  KNDKGKLSKTNKMHKDKSGKKKEVVEGKPGEEKEAEKNKSKEKELSEEKLLIYKNDLVRG 825

Query: 2704 VIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDM 2525
            VIDKAQF +YGLVHTVQE YGS+TAG LLS LSRLFTVFLQMHGFTCGVDDLLI+++ + 
Sbjct: 826  VIDKAQFADYGLVHTVQELYGSNTAGTLLSALSRLFTVFLQMHGFTCGVDDLLILKDKER 885

Query: 2524 ERMKKLQRSDKIGEEQHAKFIGAKEG-DIDQMELQVEIEKAIRIKGESAITQLDRMMSSE 2348
            ER   L  S++IG+  H + +  ++G +ID ++L+ EIEKA+R  G++A+   D  M+S+
Sbjct: 886  ERKNHLHGSEEIGKRVHLEALELEDGAEIDPIKLKSEIEKAMRGGGDAAVAYFDMKMTSQ 945

Query: 2347 LNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQISSLLGQQQLEGKRVP 2171
            LN  TS  V +EL  +GLLKP  KN +SLMTTSGAKGS VNF QISS LGQQ+LEGKRVP
Sbjct: 946  LNKHTSSSVINELLSEGLLKPTGKNWISLMTTSGAKGSKVNFQQISSHLGQQELEGKRVP 1005

Query: 2170 RMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 1991
            RMVSGKTLP F PWD A RAGGFI DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY
Sbjct: 1006 RMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 1065

Query: 1990 LQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVTKFDTLAANQRVLER 1811
            LQRCL+K+LECLK+ YD++VRDADGS+VQFCYGEDGVDVH+TSF++KFD LAANQ ++ +
Sbjct: 1066 LQRCLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVDVHQTSFISKFDALAANQEMIYK 1125

Query: 1810 LGDHFEDAQMKSDDYIKELPEALEQKTKDFLSSLTKQQRHSLHLRKRKDFXXXXXXXXXX 1631
                  DA   S+ YI ELP+AL+   + F       +        ++DF          
Sbjct: 1126 KCSGQLDA---SNAYIMELPDALKDNAEKFADKFLSNEM------AKQDFLKLVKHKFVL 1176

Query: 1630 XLAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIPRLQEILMRASETIQTP 1451
             LAQPGEPVG++A+QSVG+PSTQMTLNTFH AG G MNVTLGIPRLQEIL  AS+ I+TP
Sbjct: 1177 SLAQPGEPVGLLASQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILTIASKDIKTP 1236

Query: 1450 VMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPFSVKKHQVSSIYKLKMKLYR 1271
            V+TCPLL+GKT DDAKRLA  LKK++VADIV+ I V V  F+    Q  S+Y L M+LY+
Sbjct: 1237 VITCPLLVGKTEDDAKRLADKLKKITVADIVKKISVKVRAFTSHDGQACSVYVLTMELYK 1296

Query: 1270 PELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDTD 1091
            P+ YP ++DITLED  + +EV+FV ELE+ IQ HL++LSKI+GIKN+       +S +TD
Sbjct: 1297 PKNYPTYTDITLEDWEEILEVVFVRELEDTIQNHLLLLSKINGIKNVASGLTQKASNETD 1356

Query: 1090 EGDTGSKSQQVXXXXXXXXXXXXXXXXXXDLGVDAQKRRRQATDEMDYEDAXXXXXXXXX 911
            +  +G+ SQ                    DLG+DA K++++ATDE DYED          
Sbjct: 1357 QDGSGNVSQ---CRGDDDDADDADGEEAEDLGMDAHKQKQRATDEKDYEDGSEEEMNDGV 1413

Query: 910  XXEQSVGFESEIDQVDVE-DDNSVDGEIQ----------IFDGEDESRRGPVXXXXXXXX 764
                + GF SEIDQ + E DD+  + EI+            D   E+ +           
Sbjct: 1414 ---SAAGFGSEIDQAESEIDDDQAETEIEDDRATNEIETSQDQASENLKPFTPKSSKKKS 1470

Query: 763  XXXXXXXXXXXXXXXKDNDRAVFVEAKGLEFEVHFRFTNEPHILLAQIAQKTAKKVYIKR 584
                           KD DRA++V A+G+ FE HF+F NEP+ILLAQIA+  AKKVYI+ 
Sbjct: 1471 KSKSKRKKARAKLVKKDTDRAIYVAARGMHFEAHFKFINEPNILLAQIARHVAKKVYIQS 1530

Query: 583  SGNIEQCSV--------------------IKHDNRD-TPALQTAGVNFPAFWNMQDDLDI 467
            SG I+QC V                    IK + ++   AL T GV+F AFW +QD +D+
Sbjct: 1531 SGKIDQCQVTNCKESQVIYYGKDPKTREDIKPEEKEKVQALHTTGVDFHAFWRLQDFIDV 1590

Query: 466  RNIVSNDIHAVLHTFGVEAARATIIKEVMNVFEPYGISVDIRHLSLIADFMTHSGGYRPM 287
            R I SN+I A+L T+GVEAAR TII+E+ +VF  YGISV+ RHLSLIADFMTHSGGYRPM
Sbjct: 1591 RYIYSNNIQAMLETYGVEAARETIIREIKHVFGSYGISVNTRHLSLIADFMTHSGGYRPM 1650

Query: 286  SRY-GMAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSARICLGLPVKMGTGCFDLM 110
            SR  G+A S SPFSKM+FETAS FIVEAA +G+VD L++PSARICLGLPVKMGTG FDLM
Sbjct: 1651 SRLGGIAESVSPFSKMTFETASKFIVEAASYGQVDKLDTPSARICLGLPVKMGTGSFDLM 1710

Query: 109  QKLQ 98
            QKL+
Sbjct: 1711 QKLE 1714


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score = 1832 bits (4745), Expect = 0.0
 Identities = 1005/1703 (59%), Positives = 1201/1703 (70%), Gaps = 56/1703 (3%)
 Frame = -2

Query: 5038 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 4859
            MA TTEGA+ESV+ V FSF+TNEEVR  S  K+T PILLD +GRP   GLYDPAMG L++
Sbjct: 1    MAQTTEGASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDE 60

Query: 4858 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 4679
             TLCKSCGQR F CPGHCGHIDLVSPVYNPLLF IL N L+ TCF C+HFR     V+ C
Sbjct: 61   TTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENC 120

Query: 4678 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVKGLPRQVPNYNSKNLKQHSWTSL 4499
               LELI+ G+I  AK                 + R K     +  Y  KN +  +WTSL
Sbjct: 121  KTLLELILDGEIAKAKELEEEWMNS--------KSRTKS-SHSMYTYERKNGQPETWTSL 171

Query: 4498 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 4322
            Q+SEA+S++ + +  +++ CK CGAK+PKIT P FGWFH+  +     RAN I+ SK   
Sbjct: 172  QFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKPVS 231

Query: 4321 LSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQ 4142
            +S G            A   S++ +  +T+A         T +  + V      PE   Q
Sbjct: 232  VSSG------------AEGVSSLEEETTTEA---------TVEDFEDVS-----PEVFMQ 265

Query: 4141 KEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPP 3962
            K F SG LLPSEVK+ +K LW+NE  LCS I DI Q+     G K  +SMFF+E++LVPP
Sbjct: 266  KNFSSGHLLPSEVKDILKRLWKNEALLCSFISDISQQG---HGNKAGHSMFFLESVLVPP 322

Query: 3961 IKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKIVPRWFDLQQSINVLF 3782
            IKFRPP+KGGDSVMEHPQTVLLNKV+ SNISL N H N+SE SKIV  W DLQQSIN+LF
Sbjct: 323  IKFRPPAKGGDSVMEHPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILF 382

Query: 3781 GNSKTAGLRENMAT-GICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 3605
             +   AG  +N A+ GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPP
Sbjct: 383  DSKSAAGPGKNDASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPP 442

Query: 3604 YFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKL--PPNRKIRTSISR 3431
            YFALRLTYPERVT WNV KLR+AIING E HPGATHY+DKLATVKL   P+RK R SISR
Sbjct: 443  YFALRLTYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISR 502

Query: 3430 KLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEK 3251
            KL SSRGVV   G + ++E EGK+V RHLQDGDIVLVNRQPTLHKPSIMAHVVRVL GEK
Sbjct: 503  KLPSSRGVVVDQGCD-DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEK 561

Query: 3250 TLRMHYANCS-TYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQ 3074
            T+RMHYANCS TYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQY+ PTSGEP R LIQ
Sbjct: 562  TIRMHYANCSITYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQ 621

Query: 3073 DHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILP 2894
            DHI+SAVLLTKKDTFL ++E++ LLYSSG+S +     S KPGQK+  ++ +AE+ P+LP
Sbjct: 622  DHIISAVLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDAEMLPVLP 681

Query: 2893 AILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF---------------- 2762
            A+ KP P+WTGKQV+T+LL+HI  T+G  P  VEK  KI + +F                
Sbjct: 682  AVWKPEPLWTGKQVVTALLDHI--TQGSPPFFVEKDVKIPRGFFKCRDMGNNSSKKKEHT 739

Query: 2761 ------GRKSDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRL 2600
                    + D+ +LLI KNELV GVIDKAQFG+YGLVHTVQE YGS+TAG+LLSV+SRL
Sbjct: 740  KVDKLKAARLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMSRL 799

Query: 2599 FTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQ 2423
            FTVFLQ HGFTCGVDDLL+++ +D ER K+LQ  +KIGE+ H  F+  K+G+ +D M LQ
Sbjct: 800  FTVFLQTHGFTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQ 859

Query: 2422 VEIEKAIRIKGESAITQLDRMMSSELNDLT--SVVNSELFPKGLLKPFPKNCLSLMTTSG 2249
            + IEK I   GE+A+T LDR M+S+LN+ T  S V  +L  +GLLKP  KNC+SLMTTSG
Sbjct: 860  LNIEKTISYNGEAALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSG 919

Query: 2248 AKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRP 2069
            AKG   NF QISS LGQQQLEGKRVPRMVSGKTLPCFPPWD ASRAGGFI DRFLTGLRP
Sbjct: 920  AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRP 979

Query: 2068 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGE 1889
            QEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LE LK+CYDHTVRDADGSV+QF YGE
Sbjct: 980  QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRDADGSVIQFQYGE 1039

Query: 1888 DGVDVHKTSFVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSSL 1709
            DGVDVHKT+F+TKF+ LAANQ +L     H      K + +I ELP AL +K +   +SL
Sbjct: 1040 DGVDVHKTAFITKFEALAANQDMLYENSHH---QLGKYNVFINELPSALREKGEFIYNSL 1096

Query: 1708 TKQQRHSLHLRKRKDFXXXXXXXXXXXLAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGL 1529
            +K +   L L  ++DF           LAQPGEPVGV+AAQS+G+PSTQMTLNTFHH G 
Sbjct: 1097 SKDKVPGLVL--KEDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHVGR 1154

Query: 1528 GAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESI 1349
            G MNVTLGI RLQEILM AS+ I+TP+MTCPL  G + D AK LA  LKK++VADI+ES+
Sbjct: 1155 GEMNVTLGILRLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESM 1214

Query: 1348 EVCVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAH 1169
             V VVPFS +K ++ SIYKL++  Y  E       I+ ED   T+E +F+ ELE  I+  
Sbjct: 1215 NVTVVPFSQRKREICSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIERE 1274

Query: 1168 LIMLSKISGIKNIVLSAQSGSSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXDLGVD 989
            +++LSKI+GIKN V  +Q   SK + EGD  S S+Q                   DLG D
Sbjct: 1275 MVLLSKINGIKNFVPDSQ---SKGSSEGDEVSSSRQ--KENDDDDDEGNDLDVAEDLGSD 1329

Query: 988  AQKRRRQATDEMDYEDAXXXXXXXXXXXEQSVGFESEIDQVDVEDDNSVDGEIQIFDGED 809
             +K++ QA DEMDYED            E S GFESE+DQ D  +  + D    + D   
Sbjct: 1330 MKKQKLQANDEMDYED---DSEDDLNAKESSTGFESEVDQGDEAEITNNDMIEIVKDSAS 1386

Query: 808  ESRRGPV----XXXXXXXXXXXXXXXXXXXXXXXKDNDRAVFVEAKGLEFEVHFRFTNEP 641
            E++   V                           K+ DR++FVEAK   FEVHF+FTNEP
Sbjct: 1387 ENQPEIVDVSKSMSKEKTTETSKEKKKVKSELVRKETDRSIFVEAKENHFEVHFKFTNEP 1446

Query: 640  HILLAQIAQKTAKKVYIKRSGNIEQC--------SVIKHDN-------------RDTPAL 524
            H LL+QI Q+ A+KV I+RSG I QC         VI H N                PAL
Sbjct: 1447 HTLLSQIVQRAAQKVSIQRSGKIIQCQQITCKEGQVIYHGNNLKERKNLKPEEKEKIPAL 1506

Query: 523  QTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLHTFGVEAARATIIKEVMNVFEPYGISVDI 344
            QT+GV+F   W MQD+LD+R I SNDIHA+L T+GVEAARATII+E+ N+F  YGISV+I
Sbjct: 1507 QTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNI 1566

Query: 343  RHLSLIADFMTHSGGYRPMSRY-GMAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPS 167
            RHLSL+AD+MTHSGGYRPMSR  G++ S SPFS+M+FETA  FIV+AA HGEVD+LE+PS
Sbjct: 1567 RHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPS 1626

Query: 166  ARICLGLPVKMGTGCFDLMQKLQ 98
            +RICLGLPVKMGTG FDLMQK++
Sbjct: 1627 SRICLGLPVKMGTGSFDLMQKIE 1649


>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
            gi|557523327|gb|ESR34694.1| hypothetical protein
            CICLE_v10004132mg [Citrus clementina]
          Length = 1715

 Score = 1827 bits (4732), Expect = 0.0
 Identities = 993/1744 (56%), Positives = 1221/1744 (70%), Gaps = 97/1744 (5%)
 Frame = -2

Query: 5038 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 4859
            M  TTE  TESV+AV FSFLT+EEVR  SF K+T P+LLD + RP P GLYDP +GPL++
Sbjct: 1    MNQTTEVTTESVKAVWFSFLTDEEVRKQSFLKLTEPLLLDRVSRPLPGGLYDPILGPLDE 60

Query: 4858 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 4679
             + CK+CGQR F CPGH GHIDLV  VYNPLLF +L+ LL+R CFFC+HF+ +R +V+KC
Sbjct: 61   TSSCKTCGQRQFLCPGHFGHIDLVVSVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKC 120

Query: 4678 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVKGLPRQVP--NY-NSKNLKQHSW 4508
              +LELIIKGDI+ AK                D           P  NY N +NLK   W
Sbjct: 121  VRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKSSCSMVTPRGNYDNVRNLKPQEW 180

Query: 4507 TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSK 4331
            TSLQ++EA   L + +  + T+C  C AKNP+I+ P FGW H+N MP+   RAN+I+G  
Sbjct: 181  TSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCN 240

Query: 4330 LNKLSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQK--VKGGYLYP 4157
            L +   G       G+EE   D     DVD+ +  S    + GT D+A +   KG    P
Sbjct: 241  LGETFSG-------GEEEK--DLGTSSDVDAPETHSFNGAFPGTQDTAARRHQKGSGAVP 291

Query: 4156 E-FLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIE 3980
              F KQK+ FSGPLLPS+VK+ ++ LWENE +LCS I D+QQ+     G K  +S+FF+ 
Sbjct: 292  SGFKKQKDLFSGPLLPSDVKDIIEKLWENEFELCSFISDMQQQGF---GKKAGHSIFFLG 348

Query: 3979 ALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSK-IVPRWFDLQ 3803
             +LVPPIKFR PSKGGDSVMEHPQTVLL+KV+ +NI L N +VN+ + +K IV RW +LQ
Sbjct: 349  VVLVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQANIYLANAYVNQPDNAKVIVARWMNLQ 408

Query: 3802 QSINVLFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVN 3623
            QS+NVLF     AG R+ +A+GICQLLEKKEG+FRQK+MGKRVNYACRSVISPDPYLAVN
Sbjct: 409  QSVNVLFDGKNAAGQRD-VASGICQLLEKKEGLFRQKLMGKRVNYACRSVISPDPYLAVN 467

Query: 3622 EIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRT 3443
            EIGIPPYFALRLTYPERVTPWNV KLRD+IINGAE+HPGATHY+DKL+T++LPPN+K+R 
Sbjct: 468  EIGIPPYFALRLTYPERVTPWNVVKLRDSIINGAEIHPGATHYLDKLSTMRLPPNKKMRI 527

Query: 3442 SISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL 3263
            SI RKL +SRG + QPGK+ ++E EGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL
Sbjct: 528  SIGRKLDTSRGAIVQPGKDSDNEFEGKMVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVL 587

Query: 3262 SGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRG 3083
             GEKTLRMHYANCSTYNADFDGDEMNVHFPQDE+SRAEA+NIVNANNQY+ P++G+P R 
Sbjct: 588  KGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQYVRPSNGDPLRS 647

Query: 3082 LIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEP 2903
            LIQDHIVSA LLTKKDTFL  +E+  LLYSSGVS++    F+ KPGQ+V +  SE E+ P
Sbjct: 648  LIQDHIVSAALLTKKDTFLNRDEFCQLLYSSGVSSSGLGSFTGKPGQRVLISRSEQEVLP 707

Query: 2902 ILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF----------GRK 2753
            +LPAI KP P+WTGKQVIT++LNHI  TRG  P  VE+ GK+ +++F          GRK
Sbjct: 708  LLPAIWKPEPLWTGKQVITAVLNHI--TRGRPPFIVERGGKLPQDFFKTRFNADKQSGRK 765

Query: 2752 SD--------------------------------------------EANLLIQKNELVHG 2705
             +                                            E  LLI KN+LV G
Sbjct: 766  KNDKGKLSKTNKMHKDKSGKKKEVVEGKPGEEKEAEKNKSKEKELSEEKLLIYKNDLVRG 825

Query: 2704 VIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDM 2525
            VIDKAQF +YGLVHTVQE YGS+TAG LLS LSRLFTVFLQMHGFTCGVDDLLI+++ + 
Sbjct: 826  VIDKAQFADYGLVHTVQELYGSNTAGTLLSALSRLFTVFLQMHGFTCGVDDLLILKDKER 885

Query: 2524 ERMKKLQRSDKIGEEQHAKFIGAKEG-DIDQMELQVEIEKAIRIKGESAITQLDRMMSSE 2348
            ER   L  S++IG+  H + +  ++G +ID ++L+ EIEKA+R  G++A+   D  M+S+
Sbjct: 886  ERKNHLHGSEEIGKRVHLEALELEDGAEIDPIKLKSEIEKAMRGGGDAAVAYFDMKMTSQ 945

Query: 2347 LNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQISSLLGQQQLEGKRVP 2171
            LN  TS  V ++L  +GLLKP  KN +SLMTTSGAKGS VNF QISS LGQQ+LEGKRVP
Sbjct: 946  LNKHTSSSVINDLLSEGLLKPTGKNWISLMTTSGAKGSKVNFQQISSHLGQQELEGKRVP 1005

Query: 2170 RMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 1991
            RMVSGKTLP F PWD A RAGGFI DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY
Sbjct: 1006 RMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 1065

Query: 1990 LQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVTKFDTLAANQRVLER 1811
            LQRCL+K+LECLK+ YD++VRDADGS+VQFCYGEDGVDVH+TSF++KFD LAANQ ++ +
Sbjct: 1066 LQRCLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVDVHQTSFISKFDALAANQEMIYK 1125

Query: 1810 LGDHFEDAQMKSDDYIKELPEALEQKTKDFLSSLTKQQRHSLHLRKRKDFXXXXXXXXXX 1631
                  DA   S+ YI ELP+AL+   + F       +        ++DF          
Sbjct: 1126 KCSGQLDA---SNAYIMELPDALKDNAEKFADKFLSNEM------AKQDFLKLVKHKFVL 1176

Query: 1630 XLAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIPRLQEILMRASETIQTP 1451
             LAQPGEPVG++AAQSVG+PSTQMTLNTFH AG G MNVTLGIPRLQEIL  AS+ I+TP
Sbjct: 1177 SLAQPGEPVGLLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILTIASKDIKTP 1236

Query: 1450 VMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPFSVKKHQVSSIYKLKMKLYR 1271
            V+TCPLL+GKT DDAKRLA  LKK++VADIV+ I V V  F+    Q  ++Y L M+LY+
Sbjct: 1237 VITCPLLVGKTEDDAKRLADKLKKITVADIVKKISVKVRAFTSHDGQACTVYVLTMELYK 1296

Query: 1270 PELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDTD 1091
            P+ YP ++DITLED  + +EV+FV ELE+ IQ HL++LSKI+GIKN+       +S +TD
Sbjct: 1297 PKNYPTYTDITLEDWEEILEVVFVRELEDTIQNHLLLLSKINGIKNVASGLTQKASNETD 1356

Query: 1090 EGDTGSKSQQVXXXXXXXXXXXXXXXXXXDLGVDAQKRRRQATDEMDYEDAXXXXXXXXX 911
            +  +G+ SQ                    DLG+DA K++++ATDE DYED          
Sbjct: 1357 QEGSGNVSQ---CRGDDDDADDADGEEAEDLGMDAHKQKQRATDEKDYEDGSEGEMNDGV 1413

Query: 910  XXEQSVGFESEIDQVDVE-DDNSVDGEIQ-------IFDGED---ESRRGPVXXXXXXXX 764
                + GF SEIDQ + E DD+  + EI+       I + +D   E+ +           
Sbjct: 1414 ---SAAGFGSEIDQAESEIDDDQAETEIEDDRATNEIENSQDQASENLKPFTPKSSKKKS 1470

Query: 763  XXXXXXXXXXXXXXXKDNDRAVFVEAKGLEFEVHFRFTNEPHILLAQIAQKTAKKVYIKR 584
                           KD DRA++V A+G+ FE HF+F NEP+ILLAQIA+  AKKVYI+ 
Sbjct: 1471 KSKTKRKKARAKLVKKDTDRAIYVAARGMHFEAHFKFINEPNILLAQIARHVAKKVYIQS 1530

Query: 583  SGNIEQCSV--------------------IKHDNRD-TPALQTAGVNFPAFWNMQDDLDI 467
            SG I+QC V                    IK + ++   AL T GV+F AFW +QD +D+
Sbjct: 1531 SGKIDQCQVTNCKESQVIYYGKDPKKREDIKPEEKEKVQALHTTGVDFHAFWQLQDFIDV 1590

Query: 466  RNIVSNDIHAVLHTFGVEAARATIIKEVMNVFEPYGISVDIRHLSLIADFMTHSGGYRPM 287
            R I SN+I A+L T+GVEAAR TII+E+ +VF  YGISV+ RHLSLIADFMTHSGGYRPM
Sbjct: 1591 RYIYSNNIQAMLETYGVEAARETIIREIKHVFGSYGISVNTRHLSLIADFMTHSGGYRPM 1650

Query: 286  SRY-GMAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSARICLGLPVKMGTGCFDLM 110
            SR  G+A S SPFSKM+FE AS FIVEAA +G+VD L++PSARICLGLPVKMGTG FDLM
Sbjct: 1651 SRLGGIAESVSPFSKMTFEIASKFIVEAASYGQVDKLDTPSARICLGLPVKMGTGSFDLM 1710

Query: 109  QKLQ 98
            QKL+
Sbjct: 1711 QKLE 1714


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score = 1826 bits (4729), Expect = 0.0
 Identities = 1003/1694 (59%), Positives = 1198/1694 (70%), Gaps = 53/1694 (3%)
 Frame = -2

Query: 5020 GATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLCKS 4841
            GA+ESV+ V FSF+TNEEVR  S  K+T PILLD +GRP   GLYDPAMG L++ TLCKS
Sbjct: 13   GASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDETTLCKS 72

Query: 4840 CGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLEL 4661
            CGQR F CPGHCGHIDLVSPVYNPLLF IL N L+ TCF C+HFR     V+ C   LEL
Sbjct: 73   CGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENCKTLLEL 132

Query: 4660 IIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVKGLPRQVPNYNSKNLKQHSWTSLQYSEAM 4481
            I+ G+I  AK                 + R K     +  Y  KN +  +WTSLQ+SEA+
Sbjct: 133  ILDGEIAKAKELEEEWMNS--------KSRTKS-SHSMYTYERKNGQPETWTSLQFSEAI 183

Query: 4480 SLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNKLSMGKA 4304
            S++ + +  +++ CK CGAK+PKIT P FGWFH+  +     RAN I+ SK   +S G  
Sbjct: 184  SVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKPVSVSSG-- 241

Query: 4303 KRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQKEFFSG 4124
                      A   S++ +  +T+A         T +  + V      PE   QK F SG
Sbjct: 242  ----------AEGVSSLEEETTTEA---------TVEDFEDVS-----PEVFMQKNFSSG 277

Query: 4123 PLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIKFRPP 3944
             LLPSEVK+ +K LW+NE  LCS I DI Q+     G K  +SMFF+E++LVPPIKFRPP
Sbjct: 278  HLLPSEVKDILKRLWKNEALLCSFISDISQQG---HGNKAGHSMFFLESVLVPPIKFRPP 334

Query: 3943 SKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKIVPRWFDLQQSINVLFGNSKTA 3764
            +KGGDSVMEHPQTVLLNKV+ SNISL N H N+SE SKIV  W DLQQSIN+LF +   A
Sbjct: 335  AKGGDSVMEHPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILFDSKSAA 394

Query: 3763 GLRENMAT-GICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRL 3587
            G  +N A+ GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRL
Sbjct: 395  GPGKNDASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL 454

Query: 3586 TYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKL--PPNRKIRTSISRKLHSSR 3413
            TYPERVT WNV KLR+AIING E HPGATHY+DKLATVKL   P+RK R SISRKL SSR
Sbjct: 455  TYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSR 514

Query: 3412 GVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLRMHY 3233
            GVV   G + ++E EGK+V RHLQDGDIVLVNRQPTLHKPSIMAHVVRVL GEKT+RMHY
Sbjct: 515  GVVVDQGCD-DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHY 573

Query: 3232 ANCS-TYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIVSA 3056
            ANCS TYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQY+ PTSGEP R LIQDHI+SA
Sbjct: 574  ANCSITYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISA 633

Query: 3055 VLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILKPV 2876
            VLLTKKDTFL ++E++ LLYSSG+S +     S KPGQK+  ++ +AE+ P+LPA+ KP 
Sbjct: 634  VLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDAEMLPVLPAVWKPE 693

Query: 2875 PMWTGKQVITSLLNHISRTRGFEPLTVEKSGKI-------------KKEYF------GRK 2753
            P+WTGKQV+T+LL+HI  T+G  P  VEK  KI             KKE+         +
Sbjct: 694  PLWTGKQVVTALLDHI--TQGSPPFFVEKDVKIPRGFLILDEGNSKKKEHTKVDKLKAAR 751

Query: 2752 SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2573
             D+ +LLI KNELV GVIDKAQFG+YGLVHTVQE YGS+TAG+LLSV+SRLFTVFLQ HG
Sbjct: 752  LDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMSRLFTVFLQTHG 811

Query: 2572 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKAIRI 2396
            FTCGVDDLL+++ +D ER K+LQ  +KIGE+ H  F+  K+G+ +D M LQ+ IEK I  
Sbjct: 812  FTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLNIEKTISY 871

Query: 2395 KGESAITQLDRMMSSELNDLT--SVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFT 2222
             GE+A+T LDR M+S+LN+ T  S V  +L  +GLLKP  KNC+SLMTTSGAKG   NF 
Sbjct: 872  NGEAALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTANFQ 931

Query: 2221 QISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMA 2042
            QISS LGQQQLEGKRVPRMVSGKTLPCFPPWD ASRAGGFI DRFLTGLRPQEYYFHCMA
Sbjct: 932  QISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRPQEYYFHCMA 991

Query: 2041 GREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTS 1862
            GREGLVDTAVKTSRSGYLQRCL+K+LE LK+CYDHTVRDADGSV+QF YGEDGVDVHKT+
Sbjct: 992  GREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRDADGSVIQFQYGEDGVDVHKTA 1051

Query: 1861 FVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSSLTKQQRHSLH 1682
            F+TKF+ LAANQ +L     H      K + +I ELP AL +K +   +SL+K +   L 
Sbjct: 1052 FITKFEALAANQDMLYENSHH---QLGKYNVFINELPSALREKGEFIYNSLSKDKVPGLV 1108

Query: 1681 LRKRKDFXXXXXXXXXXXLAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGI 1502
            L  ++DF           LAQPGEPVGV+AAQS+G+PSTQMTLNTFHHAG G MNVTLGI
Sbjct: 1109 L--KEDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGI 1166

Query: 1501 PRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPFSV 1322
            PRLQEILM AS+ I+TP+MTCPL  G + D AK LA  LKK++VADI+ES+ V VVPFS 
Sbjct: 1167 PRLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQ 1226

Query: 1321 KKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISG 1142
            +K ++ SIYKL++  Y  E       I+ ED   T+E +F+ ELE  I+  +++LSKI+G
Sbjct: 1227 RKREICSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKING 1286

Query: 1141 IKNIVLSAQSGSSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXDLGVDAQKRRRQAT 962
            IK  V  +Q   SK + EGD  S S+Q                   DLG D +K++ QA 
Sbjct: 1287 IKXFVPDSQ---SKGSSEGDEVSSSRQ---EEMDDDDEGNDLDVAEDLGSDXEKQKLQAN 1340

Query: 961  DEMDYEDAXXXXXXXXXXXEQSVGFESEIDQVDVEDDNSVDGEIQIFDGEDESRRGPV-- 788
            DEMDYED            E S GFESE+DQ D  +  + D    + D   E++   V  
Sbjct: 1341 DEMDYED---DSEDDLNAKESSTGFESEVDQGDEAEITNNDMIEIVKDSASENQPEIVDV 1397

Query: 787  --XXXXXXXXXXXXXXXXXXXXXXXKDNDRAVFVEAKGLEFEVHFRFTNEPHILLAQIAQ 614
                                     K+ DR++FVEAK   FEVHF+FTNEPH LL+QI Q
Sbjct: 1398 SKSMSKEKTTETSKEKKKVKSELVRKETDRSIFVEAKENHFEVHFKFTNEPHTLLSQIVQ 1457

Query: 613  KTAKKVYIKRSGNIEQC--------SVIKHDN-------------RDTPALQTAGVNFPA 497
            + A+KV I+RSG I QC         VI H N                PALQT+GV+F  
Sbjct: 1458 RAAQKVSIQRSGKIIQCQQITCKEGQVIYHGNNLKERKNLKPEEKEKIPALQTSGVDFKT 1517

Query: 496  FWNMQDDLDIRNIVSNDIHAVLHTFGVEAARATIIKEVMNVFEPYGISVDIRHLSLIADF 317
             W MQD+LD+R I SNDIHA+L T+GVEAARATII+E+ N+F  YGISV+IRHLSL+AD+
Sbjct: 1518 LWEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVNIRHLSLVADY 1577

Query: 316  MTHSGGYRPMSRY-GMAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSARICLGLPV 140
            MTHSGGYRPMSR  G++ S SPFS+M+FETA  FIV+AA HGEVD+LE+PS+RICLGLPV
Sbjct: 1578 MTHSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSSRICLGLPV 1637

Query: 139  KMGTGCFDLMQKLQ 98
            KMGTG FDLMQK++
Sbjct: 1638 KMGTGSFDLMQKIE 1651


>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
            gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
            putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score = 1816 bits (4705), Expect = 0.0
 Identities = 991/1715 (57%), Positives = 1192/1715 (69%), Gaps = 68/1715 (3%)
 Frame = -2

Query: 5038 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 4859
            MA  TEGAT+SVEAV F+F+T EEVR  SF K+TN  LLD + RP P GLYD  +GPLED
Sbjct: 1    MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60

Query: 4858 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 4679
            RT CKSCG     CPGHCGHIDLVSP+YNPLLF  L  LLQR CFFCYHFR  + +V++C
Sbjct: 61   RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120

Query: 4678 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVKGLPRQVPNYNSKNLKQHSWTSL 4499
              QL+LI  GDIVGAK                +  +  G       +NS+ +K   WTSL
Sbjct: 121  VSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESG----SIVHNSEAVKPKEWTSL 176

Query: 4498 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 4322
            Q  EAMS+L+  +  +  +CK C AKNP IT P FGW H+N M     R N+I+G K+  
Sbjct: 177  QLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVD 236

Query: 4321 LSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKV--KGGYLYPEFL 4148
                +A    +G E+  + SS+   VD  + ++S + + G+  +  K   K   +  EF+
Sbjct: 237  TFSDEA---GSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFM 293

Query: 4147 KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 3968
            KQK  FSGPLLPSEVK   KLLWENE +LCS+I DIQQ+     G K  YSMFF+E +LV
Sbjct: 294  KQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILV 350

Query: 3967 PPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKIVPR-WFDLQQSIN 3791
            PPIKFR P+KGGDSVMEHPQTVLL+KV+ +NISL N + N  + SK V R W DLQQS+N
Sbjct: 351  PPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVN 410

Query: 3790 VLFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI 3611
            +LF +        ++++GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGI
Sbjct: 411  LLFDSKTAMSQGRDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGI 470

Query: 3610 PPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISR 3431
            PPYFALRLTYPERVTPWNV KLR+AIING+E HPGATHYVDKL+T +LPP++K R SISR
Sbjct: 471  PPYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISR 530

Query: 3430 KLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEK 3251
            KL SSRG +AQPGKNL++E EGK+V RHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEK
Sbjct: 531  KLPSSRGAIAQPGKNLDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEK 590

Query: 3250 TLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQD 3071
            T+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ P++GEP R LIQD
Sbjct: 591  TIRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPIRALIQD 650

Query: 3070 HIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPA 2891
            HIVSAVLLTK+DTFL+ +E+N LLYSSGVS+ A++ FS KPGQKV V  SE  + PI+PA
Sbjct: 651  HIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGMLPIIPA 710

Query: 2890 ILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF----------------- 2762
            ILKP P+WTGKQVI+S+L+HI  TRG  P TV K+ KI +++F                 
Sbjct: 711  ILKPKPLWTGKQVISSVLSHI--TRGRPPFTVGKTAKIPRDFFRNRRNKNKQSSREENQP 768

Query: 2761 ---GRKS-----------DEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGI 2624
               G+K+           DE  +LI +N+LV GVIDKAQF +YGLVHTVQE YGS+TAGI
Sbjct: 769  KNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGI 828

Query: 2623 LLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAK-EG 2447
            LLSV SRLFTVFLQMHGFTCGVDDLLI+++ D+ER K+L+  +K   E H +  G K   
Sbjct: 829  LLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGVKVNS 888

Query: 2446 DIDQMELQVEIEKAIRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCL 2270
            +    ELQ+EIE+ IR  GE+A+T LDR M S LN+ +S  V +EL  +GL+K   +NC+
Sbjct: 889  ETAPTELQLEIERTIRRDGETALTALDRKMISVLNENSSKGVLTELLSEGLVKSMGENCI 948

Query: 2269 SLMTTSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDR 2090
            SLMTTSGAKGS VNF QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD A+RAGGFI+DR
Sbjct: 949  SLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDR 1008

Query: 2089 FLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSV 1910
            FL+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLK+ YDHTVRDADGS+
Sbjct: 1009 FLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSI 1068

Query: 1909 VQFCYGEDGVDVHKTSFVTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQK 1733
            VQF YGEDG+DVH+TSF+ KF+ LA NQ ++ E+L     +     DD  K LP+ L  K
Sbjct: 1069 VQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQLGE----PDDSDKILPDGLRSK 1124

Query: 1732 TKDFLSSLTKQQRHSLHLRKRKDFXXXXXXXXXXXLAQPGEPVGVIAAQSVGQPSTQMTL 1553
             + F+    K+ +H     K KDF           LAQPGEPVGV+AAQSVG+PSTQMTL
Sbjct: 1125 AEQFIREEIKKYQH--QKIKPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTL 1182

Query: 1552 NTFHHAGLGAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVS 1373
            NTFH AG G MNVTLGIPRLQEILM AS  I+TPVMTCPL  GKT +DA  LA  +KK++
Sbjct: 1183 NTFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKIT 1242

Query: 1372 VADIVESIEVCVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGE 1193
            VADI+ES+EV V PF+V    + SIYKLKM L +P+ Y   SDIT++DC   ++V+F+ E
Sbjct: 1243 VADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRE 1302

Query: 1192 LEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXX 1013
            LE+ IQ HL++LSKISGIK  +  +Q  +S + DE                         
Sbjct: 1303 LEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDE------------------------- 1337

Query: 1012 XXXDLGVDAQKRRRQATDEMDYEDAXXXXXXXXXXXEQSVGFESEIDQVDVE-------- 857
                  V   + R    D+ D +D                  ESEID  + E        
Sbjct: 1338 -----DVSEGRSRETKNDDDDDDDDADDEERAEDLGASLAALESEIDMSEDETGTIQINM 1392

Query: 856  --DDNSVDGEIQIFDGEDESRRGPVXXXXXXXXXXXXXXXXXXXXXXXKDNDRAVFVEAK 683
               DN  D EI       E+R  P                        K++DRA+F   +
Sbjct: 1393 IGSDNGKD-EISQSSPNLENRSNP--KSREEKTGSEPKRKKMKAKFVRKESDRAIFNAIR 1449

Query: 682  GLEFEVHFRFTNEPHILLAQIAQKTAKKVYIKRSGNIEQCSVI----------------- 554
            GL FEVHF+  NEPHILLAQIA+KTAKKVYI+  G I+QC V                  
Sbjct: 1450 GLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKKR 1509

Query: 553  --KHDNRDTPALQTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLHTFGVEAARATIIKEVM 380
                D     AL T GV+F AFW M+D +D+R + SN IHA+L+T+GVEAAR TII+E+ 
Sbjct: 1510 KSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETIIREIS 1569

Query: 379  NVFEPYGISVDIRHLSLIADFMTHSGGYRPMSRY-GMAVSTSPFSKMSFETASTFIVEAA 203
            +VF  YGI+V+IRHL+LIADFMTHSG YRPMSR  G+A S SPFSKMSFETAS FIVEAA
Sbjct: 1570 HVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKFIVEAA 1629

Query: 202  YHGEVDDLESPSARICLGLPVKMGTGCFDLMQKLQ 98
             HG VD+LE+PS+RICLGLPVKMGTG FDLMQK++
Sbjct: 1630 KHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKVE 1664


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score = 1807 bits (4681), Expect = 0.0
 Identities = 976/1693 (57%), Positives = 1184/1693 (69%), Gaps = 46/1693 (2%)
 Frame = -2

Query: 5038 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 4859
            M  TTEGAT SVEAV FSFLT++E+R  S  KIT+PIL+D L  P PDGLYD A+GP +D
Sbjct: 1    MVLTTEGATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDD 60

Query: 4858 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 4679
            ++LCKSCGQ S  CPGH GHI+LVSPVYNPL+F IL N+LQRTCF C+HFR   ++V   
Sbjct: 61   KSLCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIR 120

Query: 4678 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVKGLPRQVPNYNSKNLKQHSWTSL 4499
              QLELI+KGDI+ AK                D     G   +   Y+++ L ++ WTSL
Sbjct: 121  TSQLELIMKGDIIRAKRLESIIPGKSVDSFNPDESIHPGDGDESQCYSAEQLGEN-WTSL 179

Query: 4498 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPNK-YTRANIIKGSKLNK 4322
            Q+SEAMS+L +L+T +  +C++CGAKNPKI+ P FGWFH+N+ +   TRA+ I+  +   
Sbjct: 180  QFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADETRADTIRSVE--- 236

Query: 4321 LSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQ 4142
                          E  ND  ++G  D+TD E          D  +K K  Y     L +
Sbjct: 237  -------------SETTNDDISLGGGDTTDVEDITSAGTAKRDKRKKEKLSYK----LAE 279

Query: 4141 KEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPP 3962
            +   SG LLPS+VK  ++LLWENE +LCS I DIQ +     G K  +SMFF+E + VPP
Sbjct: 280  QNKLSGSLLPSQVKGILELLWENEARLCSYINDIQDQGF---GKKAGHSMFFLENIFVPP 336

Query: 3961 IKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKIVPRWFDLQQSINVLF 3782
            IKFRPP+KGGD+VMEHPQTVLL KV+  NISL + H+N+S+ SK++ RW DLQQS+N+LF
Sbjct: 337  IKFRPPTKGGDNVMEHPQTVLLTKVLQCNISLGDAHLNKSDPSKVLSRWMDLQQSVNMLF 396

Query: 3781 GNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY 3602
             N KTA  + ++ATGICQLLEKKEGIFRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPPY
Sbjct: 397  DN-KTASGKRDVATGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPY 455

Query: 3601 FALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLH 3422
            FALRL+YPERVTPWNV KLR+AI+NG E HPGATHY DK++ VKLPP  K+ +  SRKL 
Sbjct: 456  FALRLSYPERVTPWNVVKLRNAILNGPESHPGATHYADKVSIVKLPPKGKLLSLTSRKLP 515

Query: 3421 SSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLR 3242
            +SRGV+   GK  +HE EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAH+VRVL GEKT+R
Sbjct: 516  TSRGVILHQGKISDHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHIVRVLKGEKTVR 575

Query: 3241 MHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIV 3062
            MHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQDHIV
Sbjct: 576  MHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIV 635

Query: 3061 SAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILK 2882
            SA LLTKKDTFL++EE+N LLYSSGVS A    F  K GQKV + NSE+E+    PAI K
Sbjct: 636  SAALLTKKDTFLSYEEFNQLLYSSGVSMAGLGSFYGKHGQKVFISNSESEMFLFPPAIWK 695

Query: 2881 PVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGR-----------------K 2753
            P P+WTGKQVI++LL +I  TRG  P T EK+ KI   +F                   K
Sbjct: 696  PEPLWTGKQVISALLYYI--TRGSPPFTAEKNAKIPSNFFKTQIRKGKRYTEDTSKKKDK 753

Query: 2752 SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2573
             DE  LLI KN+LV GV+DKAQFG+YG++HTVQE YGS+ AG LLS LSRLFT FLQMHG
Sbjct: 754  PDEDKLLIYKNDLVRGVVDKAQFGDYGMIHTVQELYGSNVAGNLLSALSRLFTTFLQMHG 813

Query: 2572 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKAIRI 2396
            FTCGVDDL++ +  D+ERM +L+  + IG+  H +FIG K  D ID + LQ+ IEK IR 
Sbjct: 814  FTCGVDDLMLTEGKDVERMNQLKSCEIIGDSVHREFIGVKNSDNIDPVTLQLNIEKKIRS 873

Query: 2395 KGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQ 2219
             GE+A+T LDR M+S LN  TS  +  +L  +G+LKP  KNC+SLMTTSGAKGS+VNF Q
Sbjct: 874  NGEAALT-LDRKMTSNLNSRTSSGILKKLLSEGILKPSGKNCISLMTTSGAKGSMVNFQQ 932

Query: 2218 ISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAG 2039
            ISS LGQQ+LEGKRVPRMVSGKTLPCFPPWD + RAGGFI DRFLT L PQEYYFHCMAG
Sbjct: 933  ISSHLGQQELEGKRVPRMVSGKTLPCFPPWDCSPRAGGFIIDRFLTALHPQEYYFHCMAG 992

Query: 2038 REGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSF 1859
            REGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGEDGVDVH+TSF
Sbjct: 993  REGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSF 1052

Query: 1858 VTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSSLTKQQRHSLHL 1679
            +T+F  L+ N+   E +  ++     +S  YI +LPEALE K + F       ++ +L  
Sbjct: 1053 ITEFGALSTNK---ELVFSNYCRQLDRSSPYINKLPEALEGKAEKF------SKQRNLGS 1103

Query: 1678 RKRKDFXXXXXXXXXXXLAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIP 1499
             ++ DF           LAQPGEPVGV+A+QSVG+P+TQMTLNTFH AG G MNVTLGIP
Sbjct: 1104 MEQADFLRLMEHKYVSCLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIP 1163

Query: 1498 RLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPFSVK 1319
            RLQEILM A+  I+TP MTCPL   K+  DA  LA  LKK++VADI++S++V VVP +V 
Sbjct: 1164 RLQEILMAAARDIKTPFMTCPLRHDKSMKDAICLADKLKKITVADIIKSMKVSVVPVTVL 1223

Query: 1318 KHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGI 1139
              QV SIYKL MKLY+ + YP ++DITL+D  +T+ V FV ELE+ IQ H+ +LSKISGI
Sbjct: 1224 GGQVCSIYKLVMKLYKSKQYPEYTDITLDDWEETLRVNFVRELEDAIQNHMTLLSKISGI 1283

Query: 1138 KNIVLSAQSGSSKDTDE----GDTGSKSQQVXXXXXXXXXXXXXXXXXXDLGVDAQKRRR 971
            K      QS  S  +++    G    K  Q                   DLG DAQKR+ 
Sbjct: 1284 KKFKTDPQSNYSNSSEDAHSNGSESEKKGQNNDDDDEDGGGVEDTEGYEDLGSDAQKRKL 1343

Query: 970  QATDEMDYEDAXXXXXXXXXXXEQSVGFESEIDQVDVEDDNSVDGEIQIFDGEDESRRGP 791
            Q TDE+DYED            E+  G E   D    E+ N+V         E  S+   
Sbjct: 1344 QGTDEVDYEDGPEEETHDGELSEEIEGDEDGSDVDANENYNNVTDANNSEGLEKPSKSKT 1403

Query: 790  VXXXXXXXXXXXXXXXXXXXXXXXKDNDRAVFVEAKGLEFEVHFRFTNEPHILLAQIAQK 611
            +                          DRA+FVEAKG  FE+HFRFT EPHILL QIAQ+
Sbjct: 1404 IDEKQNLKREKKKSEPTTKKY------DRAIFVEAKGKHFEIHFRFTGEPHILLTQIAQR 1457

Query: 610  TAKKVYIKRSGNIEQCSVI---------------------KHDNRDTPALQTAGVNFPAF 494
            TAKKV I+  G + +C  I                       +    PALQT+GV+F  F
Sbjct: 1458 TAKKVCIQNFGKVGECKAITCKESGVIYYGKDGRKRIEISASEKEQIPALQTSGVHFKTF 1517

Query: 493  WNMQDDLDIRNIVSNDIHAVLHTFGVEAARATIIKEVMNVFEPYGISVDIRHLSLIADFM 314
            W ++DDLD+R I SN++HA+L+ +GVEAAR TII+EV NVF+ YGISV+IRHL+LIADFM
Sbjct: 1518 WELEDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFM 1577

Query: 313  THSGGYRPMSRYG-MAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSARICLGLPVK 137
            TH+G YRPM+R G +A STSPF KM FETA  FIVEAAYHG+VD+LE+PSARICLGLPVK
Sbjct: 1578 THTGSYRPMNRTGSIADSTSPFIKMCFETAGNFIVEAAYHGQVDNLETPSARICLGLPVK 1637

Query: 136  MGTGCFDLMQKLQ 98
            MGTGC DL+QKL+
Sbjct: 1638 MGTGCHDLIQKLE 1650


>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
            gi|561018822|gb|ESW17626.1| hypothetical protein
            PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score = 1774 bits (4595), Expect = 0.0
 Identities = 964/1694 (56%), Positives = 1184/1694 (69%), Gaps = 47/1694 (2%)
 Frame = -2

Query: 5038 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 4859
            M   TEG T SV+AVGFSFLT++E+   S  KITNPILL+ L  P   GLYDPA+GPL+D
Sbjct: 1    MVLFTEGVTNSVKAVGFSFLTSDELLRSSRVKITNPILLNPLLNPVSGGLYDPALGPLDD 60

Query: 4858 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 4679
            ++LCKSCGQ S  CPGH GHI+LVSPVYNPL+F IL ++LQRTCF C+HF  +R++V+  
Sbjct: 61   KSLCKSCGQGSKHCPGHFGHIELVSPVYNPLMFNILSSILQRTCFSCHHFHASRKEVEMR 120

Query: 4678 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVKGLPRQVPNYNSKNLKQ--HSWT 4505
              Q ELI+KGDI+ AK                D               S+ ++Q   +W+
Sbjct: 121  TSQFELIMKGDIIRAKSLDSIISDESNHSGDGD--------------ESQGVEQLGENWS 166

Query: 4504 SLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKL 4328
            SLQ+SEAMS+L + +  +  +C+ CG  NP+I+ P FGWFH+N + +   RAN ++    
Sbjct: 167  SLQFSEAMSVLRKFLLRKYKKCQNCGVVNPRISKPTFGWFHMNVLSDDEARANTMRAL-- 224

Query: 4327 NKLSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFL 4148
                          + E  ND  ++G  ++T+ E   +   GT     K K G L  +  
Sbjct: 225  --------------ESETINDDMSLGGGETTEEED--ITSTGTA-KRDKRKKGKLSSKLA 267

Query: 4147 KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 3968
             Q +  SG LLPS+VK  ++LLWENE +LCS I DIQ +     G K  +SMFF+E + V
Sbjct: 268  AQNK-LSGSLLPSQVKGILELLWENEARLCSYISDIQDQGF---GKKAGHSMFFLENIFV 323

Query: 3967 PPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKIVPRWFDLQQSINV 3788
            PPIKFRPP+KGGD VMEHPQTVLL KV+  NISL + H+N+ + SK++ RW DLQQS+N+
Sbjct: 324  PPIKFRPPTKGGDDVMEHPQTVLLTKVLQGNISLGDAHINKLDPSKVLSRWMDLQQSVNL 383

Query: 3787 LFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIP 3608
            LF N KT+G  E +A GICQLLEKKEGIFRQKMMGKRVN+ACRSVISPDPYLAVNEIGIP
Sbjct: 384  LFDN-KTSGQGE-VAAGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIP 441

Query: 3607 PYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRK 3428
            PYFALRL+YPERVTPWNV  LR+AI+NG + HPGATHY D+ ATVKLPPN K+ + ISRK
Sbjct: 442  PYFALRLSYPERVTPWNVTMLRNAILNGPQSHPGATHYTDQQATVKLPPNGKLLSFISRK 501

Query: 3427 LHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKT 3248
            L SSRGV+   GK  + E EGK+VYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVL GEKT
Sbjct: 502  LPSSRGVILDHGKISDQEFEGKIVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT 561

Query: 3247 LRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDH 3068
            +RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQDH
Sbjct: 562  VRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDH 621

Query: 3067 IVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAI 2888
            IVSA LLTKKDTF+T+E +  LLYSSGVS      FS K GQKV + NSE E+    PAI
Sbjct: 622  IVSAALLTKKDTFITYEVFIQLLYSSGVSMTGLGSFSGKHGQKVFMTNSEFEMFLFPPAI 681

Query: 2887 LKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------GRK--------- 2753
             KP P+WTGKQVI++LL +I  TR   P TVEK+ KI   +F      G++         
Sbjct: 682  WKPEPLWTGKQVISALLYYI--TRDSPPFTVEKNAKIPSNFFKTQVRDGKRHTRDKSRNK 739

Query: 2752 ---SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQ 2582
                DE  LLI KN+LV GV+DKAQFG+YG++HTVQE YGS  AG LLS LSRLFT FLQ
Sbjct: 740  VEPDDEDKLLIYKNDLVRGVVDKAQFGDYGIIHTVQELYGSKVAGNLLSALSRLFTTFLQ 799

Query: 2581 MHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKA 2405
            MHGFTCGVDDL+I +E D+ERM +L+  ++IG+  H +FIG    D ID + LQ+ IEK 
Sbjct: 800  MHGFTCGVDDLMITEEKDVERMDQLRSCEEIGDIVHREFIGVMNSDIIDPITLQLNIEKK 859

Query: 2404 IRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVN 2228
            IR  GE+A+T LDR M+S LN  TS  +  +L   G+LKP  KNC+SLMTTSGAKGS+VN
Sbjct: 860  IRSNGEAALTYLDRKMTSNLNSRTSSGILKDLLSDGILKPSGKNCISLMTTSGAKGSMVN 919

Query: 2227 FTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHC 2048
            F QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD + RAGGFI DRFLTGL PQEYYFHC
Sbjct: 920  FQQISSHLGQQELEGKRVPRMVSGKTLPCFAPWDCSPRAGGFIIDRFLTGLHPQEYYFHC 979

Query: 2047 MAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHK 1868
            MAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGEDGVDVH 
Sbjct: 980  MAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHH 1039

Query: 1867 TSFVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSSLTKQQRHS 1688
            TSF+ KF+ L+ N+ ++   G+       +S  YI +LP+AL++K ++F     KQ+  +
Sbjct: 1040 TSFINKFEALSTNKELV--YGNCCRQLD-RSSPYINKLPDALKEKAENFFRDSLKQR--N 1094

Query: 1687 LHLRKRKDFXXXXXXXXXXXLAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTL 1508
            L   KR +F           LAQPGE VGV+A+QSVG+P+TQMTLNTFH AG G MNVTL
Sbjct: 1095 LGSLKRAEFLKLMEHKYVSCLAQPGESVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTL 1154

Query: 1507 GIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPF 1328
            GIPRLQEI+M A+  I+TP MTCPL   K+ ++A  LA  LKK++VADI++S++V VVP 
Sbjct: 1155 GIPRLQEIVMAAARDIKTPFMTCPLRSNKSMEEAICLADKLKKITVADIIKSMKVSVVPV 1214

Query: 1327 SVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKI 1148
            SV   QV SIYKL MKLY+P+ YP +SDITLED   T+ + FV ELE+ I+ H+ +LSKI
Sbjct: 1215 SVLGGQVCSIYKLVMKLYKPKQYPKYSDITLEDWEDTLRISFVRELEDAIENHMALLSKI 1274

Query: 1147 SGIKNIVLSAQSGSSKDTDEGDTGSKSQQ--VXXXXXXXXXXXXXXXXXXDLGVDAQKRR 974
            SGIK      QS S+   D    GS+S+                      DLG DAQKR+
Sbjct: 1275 SGIKKFKTDPQSHSNSSEDAHGNGSESETKGKSNDDDDDDDVVEDTEGYEDLGSDAQKRK 1334

Query: 973  RQATDEMDYEDAXXXXXXXXXXXEQSVGFESEIDQVDVEDDNSVDGEIQIFDGEDESRRG 794
            RQ TDE+DYED               +  E E D+ +V+D+ ++D      +G DE    
Sbjct: 1335 RQGTDEVDYEDGPEEETHDGV-----LSEEIENDEDNVDDNMTLDASDS--EGLDE---- 1383

Query: 793  PVXXXXXXXXXXXXXXXXXXXXXXXKDNDRAVFVEAKGLEFEVHFRFTNEPHILLAQIAQ 614
             +                       +  DRAVFV+AKG+ F++HF+FT EP ILLA+IA 
Sbjct: 1384 -LSESKSIFEKDSLKREKKKSRPTTRKYDRAVFVKAKGMHFQIHFKFTGEPDILLAEIAL 1442

Query: 613  KTAKKVYIKRSGNIEQCSVI---------------KHDN------RDTPALQTAGVNFPA 497
            ++AKKV I+ SG + +C  +               K D+         PALQT+GV+F  
Sbjct: 1443 RSAKKVCIQNSGRVGECKAVTCKESGVMYYGEDSRKRDDIPASVKEKIPALQTSGVHFKT 1502

Query: 496  FWNMQDDLDIRNIVSNDIHAVLHTFGVEAARATIIKEVMNVFEPYGISVDIRHLSLIADF 317
            FW +QDDLD+R I SN++HA+L+ +GVEAAR TII+EV NVF+ YGISV+IRHL+LIADF
Sbjct: 1503 FWELQDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADF 1562

Query: 316  MTHSGGYRPMSRYG-MAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSARICLGLPV 140
            MTHSGGYRPM+R G +A  TSPF KM FETAS FIVEAAYHG+VD+LE+PS+RICLGLPV
Sbjct: 1563 MTHSGGYRPMNRNGSIADCTSPFIKMCFETASKFIVEAAYHGQVDNLETPSSRICLGLPV 1622

Query: 139  KMGTGCFDLMQKLQ 98
            KMGTGC DL+QKL+
Sbjct: 1623 KMGTGCHDLIQKLE 1636


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score = 1761 bits (4561), Expect = 0.0
 Identities = 935/1697 (55%), Positives = 1184/1697 (69%), Gaps = 56/1697 (3%)
 Frame = -2

Query: 5023 EGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLCK 4844
            +GA+E+VEAV FSF+T+EEVR  S  K+T+P LLD L  P P+GLYDPAMGPL+  + CK
Sbjct: 3    QGASEAVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62

Query: 4843 SCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLE 4664
             C Q +  C GHCGHI+LVSPVYNPLLF +L NLLQRTCF+C+HFR +R +V+KC  +LE
Sbjct: 63   FCCQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120

Query: 4663 LIIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVKGLPRQVPNYNSKNL-KQHSWTSLQYSE 4487
            LI KGD+VGAK                +   +      +   + +   K+ SW + Q++E
Sbjct: 121  LIAKGDVVGAKMIDALSPDNSTDREESEGSHMSCAMDDLNMQDHREYNKRPSWDNFQFTE 180

Query: 4486 AMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPNKYTRANIIK-GSKLNKLSMG 4310
            AM+++D ++  +  +C  C AKNPKI  P+FG FH+++ NK  R N I  G + N    G
Sbjct: 181  AMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMDISNKQIRENYINSGRRFNLHDTG 240

Query: 4309 KAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDS-AQKVKGGYLYPEFLKQKEF 4133
             ++ N + +  NA +   +G+ +++   +S    DG  +S A+K +GG       +QK+ 
Sbjct: 241  GSEENPSPEVVNATEP--LGEAETSLCVTST---DGVENSKARKRQGGDQSDVVEQQKDS 295

Query: 4132 FSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIKF 3953
            FS   LPS+V++ ++ LWENE  LC+  CDIQ +  + SG     SMFF++++LVPPIKF
Sbjct: 296  FSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHHNTSGKVAGPSMFFLDSILVPPIKF 355

Query: 3952 RPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKIVPRWFDLQQSINVLFGNS 3773
            RPP+KGGDS+MEHP TVLL KV+ +NI+L N H+NR+ RSKI+ R  DLQQS+NVLF + 
Sbjct: 356  RPPAKGGDSIMEHPHTVLLGKVVQANIALGNAHINRAGRSKIISRLMDLQQSVNVLFDSK 415

Query: 3772 KTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFA 3596
              +G  ++++ +GICQ+LEKKEGIFRQKMMGKRVN+ACRSVISPDPYL+VNEIGIPPYFA
Sbjct: 416  TASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFA 475

Query: 3595 LRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLHSS 3416
            LRLTYPER+TPWN  K+RDA+ING E HPGA  + D++ATVKLP N+K+R +ISRKL SS
Sbjct: 476  LRLTYPERLTPWNAVKMRDAVINGPENHPGAVSFADRIATVKLPSNKKMRVAISRKLPSS 535

Query: 3415 RGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLRMH 3236
            RG V Q G+N E+E EGKVVYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEKTLRMH
Sbjct: 536  RGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 595

Query: 3235 YANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIVSA 3056
            YANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNAN QYI+PT G+  RGLIQDHIV A
Sbjct: 596  YANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVGA 655

Query: 3055 VLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILKPV 2876
            V+LT K+TFLT  E+N LLY SGV AA     S     KVSV++ E  ++ +LPA+ KP 
Sbjct: 656  VILTMKNTFLTLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSVVDFEGVVQTVLPAVWKPK 715

Query: 2875 PMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKS---------------DEA 2741
            P+WTGKQVIT+LLNH+  T+G  P TV+  GKI   YF  +S                E 
Sbjct: 716  PLWTGKQVITALLNHL--TKGCAPCTVKNKGKIPYPYFLSESRLVEYQSREEQEDRTAEN 773

Query: 2740 NLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHGFTCG 2561
              LI KNELV GVIDKAQFG++GLVHT+QE YGS+ AGILLS LSRLFT+FLQ+HGFTCG
Sbjct: 774  EFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFLQLHGFTCG 833

Query: 2560 VDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDIDQMELQVEIEKAIRIKGESA 2381
            VDDL+I+   D+ R ++L+  D +GEE H  F+  K G+I  +ELQ+EIEKA+    E+A
Sbjct: 834  VDDLVILPHYDIRRKEELE-GDDVGEEAHCDFVKFKRGEIGPLELQLEIEKAMSSNKEAA 892

Query: 2380 ITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQISSLLG 2201
               LD  M ++L +  S  N EL  KGLLKPFP+NC++LMT +GAKGS VNF QISS LG
Sbjct: 893  TAALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGAKGSTVNFQQISSYLG 952

Query: 2200 QQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGREGLVD 2021
            QQ+LEGKRVPRMVSGKTLPCFPPWD ASRAGG+++DRFL+GLRPQEYYFHCMAGREGLVD
Sbjct: 953  QQELEGKRVPRMVSGKTLPCFPPWDCASRAGGYVSDRFLSGLRPQEYYFHCMAGREGLVD 1012

Query: 2020 TAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVTKFDT 1841
            TAVKTSRSGYLQRCL+K+LE LKVCYD+TVRDADGS++QF YGEDGVDVH+TSF+  F  
Sbjct: 1013 TAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHRTSFLKNFKA 1072

Query: 1840 LAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSSLTKQQRHSLHLRKRK-- 1667
            L  NQ  + +   H      K + YI++LP+ LE+K K F    TK+    L    +K  
Sbjct: 1073 LKNNQETICQKLRH----GRKLNSYIEKLPDGLEEKVKHFWEKRTKKLEKKLGKLVKKEE 1128

Query: 1666 ----------DFXXXXXXXXXXXLAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMN 1517
                      DF           LA  GEPVGV+A QSVG+PSTQMTLNTFH AG G MN
Sbjct: 1129 MVKQLKEEEADFLELVRQKYFSSLADSGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMN 1188

Query: 1516 VTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCV 1337
            VTLGIPRLQEILM ASE I+TP++TCP L  ++ +DA+ L A +KK++VAD++ES+EV +
Sbjct: 1189 VTLGIPRLQEILMTASEAIKTPILTCPFLGWQSKNDAQSLLAKVKKITVADMIESMEVKL 1248

Query: 1336 VPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIML 1157
            +P S+  HQVS +YKL +KL + +       ++ EDC  T++ +F+ ELE+ I++HL +L
Sbjct: 1249 LPLSIYNHQVSQLYKLTVKLKKHDF------VSSEDCEYTLKFVFLRELEDAIESHLALL 1302

Query: 1156 SKISGIKNIVLSAQSGSSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXDLGVDAQKR 977
            SKI+GI+N   S++S  S +T+E  + ++ ++                   DL  DAQKR
Sbjct: 1303 SKINGIQNFKTSSESVDSDETEENASSTRHEE------EMLDDEDEDERTEDLSSDAQKR 1356

Query: 976  RRQATDEMDYEDAXXXXXXXXXXXEQSVGFE--SEIDQVDVEDDNSVDGEIQI--FDGED 809
            ++Q TDEMDY+D             +    E   EID  D E+  +   E Q+      +
Sbjct: 1357 KQQTTDEMDYDDDENEDEAETTAEIEDEKSEQTDEIDNGDEEEIGNRGNEEQMSKLQSTE 1416

Query: 808  ESRRGPVXXXXXXXXXXXXXXXXXXXXXXXKDNDRAVFVEAKGLEFEVHFRFTNEPHILL 629
            +                             KD+DR VFV+ +GL FEVHFRF NEPHILL
Sbjct: 1417 DDISNTKSSKSKTKTKTTVKQNKKKERRSKKDSDRCVFVDVEGLHFEVHFRFVNEPHILL 1476

Query: 628  AQIAQKTAKKVYIKRSGNIEQCSVIKHDNRDTP--------------------ALQTAGV 509
            AQ+AQKTAKKVYIK SG I+QC ++K++  +                      AL+ AGV
Sbjct: 1477 AQVAQKTAKKVYIKNSGKIDQCRMVKYEVTENTVMWDEYQTKQQSQDSDSAYWALKAAGV 1536

Query: 508  NFPAFWNMQDDLDIRNIVSNDIHAVLHTFGVEAARATIIKEVMNVFEPYGISVDIRHLSL 329
            +F  FW MQDDLD+  I +N+I A+L+T+GVEAARA+I++EV  VF  YG+ +D RHLSL
Sbjct: 1537 DFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASILREVKTVFGIYGVEIDFRHLSL 1596

Query: 328  IADFMTHSGGYRPMSRYG-MAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSARICL 152
            IADFMTH+GGY+PMSR+G ++ S SPF KMSFETAS FIVEAA HG  D+LE+PS+RICL
Sbjct: 1597 IADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEAAAHGLTDNLETPSSRICL 1656

Query: 151  GLPVKMGTGCFDLMQKL 101
            GLPVKMGTGCFD+MQKL
Sbjct: 1657 GLPVKMGTGCFDIMQKL 1673


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score = 1750 bits (4532), Expect = 0.0
 Identities = 931/1701 (54%), Positives = 1178/1701 (69%), Gaps = 60/1701 (3%)
 Frame = -2

Query: 5023 EGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLCK 4844
            +GA+E+VEAV FSF+T+EEVR  S  K+T+P LLD L  P P+GLYDPAMGPL+  + CK
Sbjct: 3    QGASETVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62

Query: 4843 SCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLE 4664
             C Q +  C GHCGHI+LVSPVYNPLLF +L NLLQRTCF+C+HFR +R +V+KC  +LE
Sbjct: 63   FCSQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120

Query: 4663 LIIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVKGLP-----RQVPNYNSKNLKQHSWTSL 4499
            LI KGD+VGAK                +   +         R    YN    K+ SW + 
Sbjct: 121  LIAKGDVVGAKMIDALSPDNSTDREESEGSHMSCTMDDLNVRDHCEYN----KRPSWDNF 176

Query: 4498 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPNKYTRANIIK-GSKLNK 4322
            Q++EAM+++D ++  +  +C  C AKNPKI  P+FG FH+++ NK  R N I  G + N 
Sbjct: 177  QFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMDISNKQIRENYINSGRRFNL 236

Query: 4321 LSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDS-AQKVKGGYLYPEFLK 4145
               G ++ N + +  NA +   +G+ +++   +S    DG  +S  +K +GG       +
Sbjct: 237  HDTGGSEENPSPEVVNATEP--LGEAETSLCVTST---DGVENSKGRKRQGGDQSDVVEQ 291

Query: 4144 QKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVP 3965
            QK+ FS   LPS+V++ ++ LWENE  LC+  CDIQ +  + SG     SMFF++++LVP
Sbjct: 292  QKDSFSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHRNTSGKVAGPSMFFLDSILVP 351

Query: 3964 PIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKIVPRWFDLQQSINVL 3785
            P+KFRPP+KGGDS+MEHP TVLL KV+ +NI+L N H+NR+ RSKI+ R  DLQQS+NVL
Sbjct: 352  PVKFRPPAKGGDSIMEHPHTVLLGKVIQANIALGNAHINRAGRSKIISRLMDLQQSVNVL 411

Query: 3784 FGNSKTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIP 3608
            F +   +G  ++++ +GICQ+LEKKEGIFRQKMMGKRVN+ACRSVISPDPYL+VNEIGIP
Sbjct: 412  FDSKTASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIP 471

Query: 3607 PYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRK 3428
            PYFA RLTYPER+TPWN  K+RDA+ING E HPGA  + D++ATVKLP N+K+R +ISRK
Sbjct: 472  PYFASRLTYPERLTPWNAVKMRDAVINGPENHPGAISFADRIATVKLPSNKKMRVAISRK 531

Query: 3427 LHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKT 3248
            L SSRG V Q G+N E+E EGKVVYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEKT
Sbjct: 532  LPSSRGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT 591

Query: 3247 LRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDH 3068
            LRMHYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNAN QYI+PT G+  RGLIQDH
Sbjct: 592  LRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDH 651

Query: 3067 IVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAI 2888
            IV AV+LT K+TFL+  E+N LLY SGV AA     S     KVS+++ E  ++ +LPA+
Sbjct: 652  IVGAVILTMKNTFLSLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSIVDFEGVVQTVLPAV 711

Query: 2887 LKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKS-------------- 2750
             KP P+WTGKQVIT+LLNH+  T G  P TV+  GKI   YF  +S              
Sbjct: 712  WKPKPLWTGKQVITALLNHL--TNGCPPCTVKNKGKIPYAYFLSESRLVEYQSREEQEDR 769

Query: 2749 -DEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2573
              E   LI KNELV GVIDKAQFG++GLVHT+QE YGS+ AGILLS LSRLFT+FLQ+HG
Sbjct: 770  TAENEFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFLQLHG 829

Query: 2572 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDIDQMELQVEIEKAIRIK 2393
            FTCG+DDL+I+   D+ R ++L+  D +GEE H  F+  K G+I  +ELQ+EIEKAI   
Sbjct: 830  FTCGIDDLVILPHYDIRRKEELE-GDDVGEEAHCDFVKFKRGEIGPLELQLEIEKAISSN 888

Query: 2392 GESAITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQIS 2213
             E A   LD  M ++L +  S  N EL  KGLLKPFP+NC++LMT +GAKGS VNF QIS
Sbjct: 889  KEVATAALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGAKGSTVNFQQIS 948

Query: 2212 SLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGRE 2033
            S LGQQ+LEGKRVPRMVSGKTLPCFP WD ASRAGG+++DRFL+GLRPQEYYFHCMAGRE
Sbjct: 949  SYLGQQELEGKRVPRMVSGKTLPCFPAWDCASRAGGYVSDRFLSGLRPQEYYFHCMAGRE 1008

Query: 2032 GLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVT 1853
            GLVDTAVKTSRSGYLQRCL+K+LE LKVCYD+TVRDADGS++QF YGEDGVDVH+TSF+ 
Sbjct: 1009 GLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHRTSFLK 1068

Query: 1852 KFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSSLTKQQRHSLHLRK 1673
             F  L  NQ  + +   H      K + YI++LP+ L +K K F  S TK+    L +  
Sbjct: 1069 NFKALKNNQETICQKLRH----GCKLNSYIEKLPDGLGEKVKHFWESKTKKLEKKLGMLV 1124

Query: 1672 RK------------DFXXXXXXXXXXXLAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGL 1529
            +K            DF           LA  GEPVGV+A QSVG+PSTQMTLNTFH AG 
Sbjct: 1125 KKEEMVKQLKEEEADFLELVGQKYFSSLADSGEPVGVLAGQSVGEPSTQMTLNTFHLAGR 1184

Query: 1528 GAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESI 1349
            G MNVTLGIPRLQEILM ASE I+TP+MTCP L  K+ +DA+ L A +KK++VAD++ES+
Sbjct: 1185 GEMNVTLGIPRLQEILMTASEAIKTPIMTCPFLGWKSKNDAQSLLAKVKKITVADMIESM 1244

Query: 1348 EVCVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAH 1169
            EV ++P S+  HQVS +YKL +KL + +       ++ EDC  T++ +F+ ELE+ I++H
Sbjct: 1245 EVKLLPLSIYNHQVSQLYKLTVKLKKHDF------VSSEDCEYTLKFVFLRELEDAIESH 1298

Query: 1168 LIMLSKISGIKNIVLSAQSGSSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXDLGVD 989
            L +LSKI+GI+N   S++S  S +T+E  + ++ ++                   DL  D
Sbjct: 1299 LALLSKINGIQNFKTSSESVDSDETEENASSTRREE----EMLDDDDDDEDERTEDLSSD 1354

Query: 988  AQKRRRQATDEMDYED----AXXXXXXXXXXXEQSVGFESEIDQVDVEDDNSVDGEIQIF 821
            AQKR++Q TDEMDY+D    A           ++      EID  D E++     E    
Sbjct: 1355 AQKRKQQTTDEMDYDDDEDEAEAEAEATAEIEDEKSEQTDEIDNGDEEENGDRGNEEHTS 1414

Query: 820  DGEDESRRGPVXXXXXXXXXXXXXXXXXXXXXXXKDNDRAVFVEAKGLEFEVHFRFTNEP 641
              +                               KD+DR VFV+ +GL FEVHFRF NEP
Sbjct: 1415 KLQSTEEDISNTKTSKSKTKTTVKQKKKKERRSKKDSDRCVFVDVEGLHFEVHFRFVNEP 1474

Query: 640  HILLAQIAQKTAKKVYIKRSGNIEQCSVIKHDNRDTP--------------------ALQ 521
            HILLAQ+AQKTAKKVY+K SG I+QC ++K++  +                      AL+
Sbjct: 1475 HILLAQVAQKTAKKVYVKNSGKIDQCRMVKYEVTENTVMWDENQTKQQRQDSDSAYWALK 1534

Query: 520  TAGVNFPAFWNMQDDLDIRNIVSNDIHAVLHTFGVEAARATIIKEVMNVFEPYGISVDIR 341
             AGV+F  FW MQDDLD+  I +N+I A+L+T+GVEAARA+I++EV  VF  YG+ +D R
Sbjct: 1535 AAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASILREVKTVFGIYGVEIDFR 1594

Query: 340  HLSLIADFMTHSGGYRPMSRYG-MAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSA 164
            HLSLIADFMTH+GGY+PMSR+G ++ S SPF KMSFETAS FIVEAA HG  D+LE+PS+
Sbjct: 1595 HLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEAAAHGLTDNLETPSS 1654

Query: 163  RICLGLPVKMGTGCFDLMQKL 101
            RICLGLPVKMGTGCFD+MQ+L
Sbjct: 1655 RICLGLPVKMGTGCFDIMQEL 1675


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1650

 Score = 1738 bits (4501), Expect = 0.0
 Identities = 948/1694 (55%), Positives = 1175/1694 (69%), Gaps = 47/1694 (2%)
 Frame = -2

Query: 5038 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 4859
            MA  TEGAT SV+AV FSFLT+EE+   S  KITNPILLD L  P   GLYDPA+GP  +
Sbjct: 1    MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHE 60

Query: 4858 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 4679
            ++ C+SCGQ S+ CPGH GHI+LVSPVYNPL+F +L N+L+RTCF C+HF+ +R +V+  
Sbjct: 61   KSPCQSCGQNSYHCPGHFGHIELVSPVYNPLMFSMLSNVLRRTCFSCHHFQASRNEVELR 120

Query: 4678 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVKGLPRQVPNYNSKNLKQHSWTSL 4499
            A QLELI+KG+I  AK                +  +           +S      +WTSL
Sbjct: 121  ANQLELIMKGNIAKAKNLDAINLDESADLSDGNDSQC----------SSDEQLGENWTSL 170

Query: 4498 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 4322
            Q+SEAMS+L + +  +  +C+ CG  NPKIT P FGWFHV  +     RAN+I G   + 
Sbjct: 171  QFSEAMSVLRKFLKKEFRKCQNCGNINPKITKPTFGWFHVKALSAAQARANVISGIDASL 230

Query: 4321 LSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQ 4142
             S            E  +D  ++G+ D+TD E   +    T +S  K +        L +
Sbjct: 231  AS------------EIIHDDISLGNGDTTDVED--ITSGDTANSNAKRQNK------LAR 270

Query: 4141 KEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPP 3962
                SG LLPS+V+  ++LLWENE +LC  I DIQ +     G K  +SMFF++ + VPP
Sbjct: 271  HNKLSGSLLPSQVQGILELLWENEARLCLYISDIQGQGF---GKKAGHSMFFLDNIYVPP 327

Query: 3961 IKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKIVPRWFDLQQSINVLF 3782
            IKFRPP+KG D V EH QTVLL +V+ SNISL   H+N+S+ S ++ RW DLQ+S+N+LF
Sbjct: 328  IKFRPPTKGDDKVSEHAQTVLLTRVLESNISLGQAHLNKSDASVVLRRWMDLQRSVNLLF 387

Query: 3781 GNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY 3602
             N KTA  ++++ TGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY
Sbjct: 388  DN-KTASGQKDLVTGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY 446

Query: 3601 FALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLH 3422
            FALRLTYPERVTPWNV +LR+AI+NG E HPGAT Y DK +T+KLP +R+ R+  SRKL 
Sbjct: 447  FALRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTSTLKLPLDRRSRSLTSRKLQ 506

Query: 3421 SSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLR 3242
            SSRGV+   GK  ++E EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVL GEKT+R
Sbjct: 507  SSRGVIMHNGKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVR 566

Query: 3241 MHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIV 3062
            MHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQDHIV
Sbjct: 567  MHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIV 626

Query: 3061 SAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILK 2882
            SA LLTKKDTFL+ EE+N LLYSSGVS      F  KPGQK+ + NS++E+    PAI K
Sbjct: 627  SAALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKIFMSNSDSEMFLFPPAIFK 686

Query: 2881 PVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------GRK----------- 2753
            P P+WTGKQVI++LL +I  T+G  P TVEK+ KI   +F      G+K           
Sbjct: 687  PEPLWTGKQVISALLYYI--TKGSPPFTVEKNAKIPSSFFKTRMREGKKRTKDTSIKKDE 744

Query: 2752 SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2573
             DE  LLI +N+LV GV+DKAQFG+YG+VHTVQEFYGS+TAGILLS LSRLFT FLQMHG
Sbjct: 745  PDEDKLLIYRNDLVRGVVDKAQFGDYGIVHTVQEFYGSNTAGILLSALSRLFTNFLQMHG 804

Query: 2572 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKAIRI 2396
            FTCGVDDLL+ +  D ER  +L+  ++IG+  H +FIG  EGD ID + +Q+ +EK IR 
Sbjct: 805  FTCGVDDLLLTEGKDSERTNQLESCEEIGDIVHREFIGVMEGDNIDPITMQLNVEKKIRS 864

Query: 2395 KGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQ 2219
             GE+AIT LDR M S LN  TS  V   L  +G+LKP  KN +SLMTTSGAKGS+VNF Q
Sbjct: 865  NGEAAITYLDRKMISNLNSRTSTGVLKVLLSEGILKPSGKNWISLMTTSGAKGSMVNFQQ 924

Query: 2218 ISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAG 2039
            ISS LGQQ+LEGKRVPRMVSGKTLPCF  WD + RAGGFI DRFLT LRPQEYYFHCMAG
Sbjct: 925  ISSHLGQQELEGKRVPRMVSGKTLPCFTSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAG 984

Query: 2038 REGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSF 1859
            REGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGEDGVDVH+TSF
Sbjct: 985  REGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSF 1044

Query: 1858 VTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSSLTKQQRHSLHL 1679
            + KF+ L+ N+ ++        D   KS  YI +LP+AL+ K + F+   + +QR+S  +
Sbjct: 1045 INKFEALSTNKELVYSNCCRELD---KSSPYINKLPDALKGKAEKFILDSSSKQRNSGSM 1101

Query: 1678 RKRKDFXXXXXXXXXXXLAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIP 1499
                +F           LAQPGEPVGV+A+QSVG+P+TQMTLNTFH AG G MNVTLGIP
Sbjct: 1102 -THTNFLHLMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIP 1160

Query: 1498 RLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPFSVK 1319
            RLQEIL  AS  I+TP MTCPL   K+ +DA RLA  +KK++VADI+ES++V VVP +V+
Sbjct: 1161 RLQEILTAASAHIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVTVQ 1220

Query: 1318 KHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGI 1139
              ++ SIYKL MKL++P+ YP ++D+TL+D  +T+ V FV  LE+ I+ ++ +L+KISGI
Sbjct: 1221 DGRICSIYKLMMKLHKPKHYPKYTDVTLKDWEETLRVSFVRGLEDAIENNIALLAKISGI 1280

Query: 1138 KNIVLSAQSGSSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXDLGVDAQKRRRQATD 959
             N    AQ  SS   ++  +  K+                     DLG+DAQK +RQ  D
Sbjct: 1281 TNFKTDAQPNSSNGAEDDPSNGKTND----DDDDDGDADDTEGAEDLGLDAQKSKRQVVD 1336

Query: 958  EMDYEDAXXXXXXXXXXXEQSV-GFESEIDQVDVEDD----NSVDGEIQIFDGEDESRRG 794
            ++DY+D             + + G E   D   V+DD    +  DG+    DG D     
Sbjct: 1337 DVDYDDGPEEETLEDGELSEDLEGVEDAKDNEYVKDDGDGKDDEDGKGD-EDGSDIEVNE 1395

Query: 793  PVXXXXXXXXXXXXXXXXXXXXXXXKDNDRAVFVEAKGLEFEVHFRFTNEPHILLAQIAQ 614
                                     K  DR V+V+ +   FE+HF+FT EPHILLAQIAQ
Sbjct: 1396 NDKKVTLGANYSQGPEENSKSQPVSKKFDRRVYVKFEKRHFEIHFKFTGEPHILLAQIAQ 1455

Query: 613  KTAKKVYIKRSGNIEQC--------SVIKHDNRDT-------------PALQTAGVNFPA 497
            KTA+KV I+  G + QC         VI +   D+             PALQT+G++F +
Sbjct: 1456 KTAEKVCIQNFGKVGQCKAITCKESGVIYYGEDDSKREEIPSSVKEKIPALQTSGIHFKS 1515

Query: 496  FWNMQDDLDIRNIVSNDIHAVLHTFGVEAARATIIKEVMNVFEPYGISVDIRHLSLIADF 317
            FW MQDDL++R + SN++HA+L T+GVEAA+ TII+EV NVF+ YGISV+IRHL LIADF
Sbjct: 1516 FWEMQDDLNVRYVYSNNVHAILSTYGVEAAKETIIREVQNVFKSYGISVNIRHLMLIADF 1575

Query: 316  MTHSGGYRPMSRYG-MAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSARICLGLPV 140
            MTHSG YRPMSR G +A STSPF K+ FETAS FIVEAA HG+VD+L+SPSARICLGLPV
Sbjct: 1576 MTHSGCYRPMSRKGSIADSTSPFLKICFETASNFIVEAACHGQVDNLDSPSARICLGLPV 1635

Query: 139  KMGTGCFDLMQKLQ 98
            KMGTGC +L+QKL+
Sbjct: 1636 KMGTGCHELIQKLE 1649


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1660

 Score = 1729 bits (4478), Expect = 0.0
 Identities = 944/1701 (55%), Positives = 1176/1701 (69%), Gaps = 54/1701 (3%)
 Frame = -2

Query: 5038 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 4859
            MA  TEGAT SV+AV FSFLT+EE+   S  KITNPILLD L  P   GLYDPA+GP  +
Sbjct: 1    MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHE 60

Query: 4858 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 4679
            ++ C+SCGQ S+ CPGH GHI+LVSP YNPL+F +L N+L+RTCF C+HF+ +R++V+  
Sbjct: 61   KSPCQSCGQNSYHCPGHFGHIELVSPAYNPLMFSMLSNVLRRTCFSCHHFQASRKEVELR 120

Query: 4678 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVKGLPRQVPNYNSKNLKQHSWTSL 4499
            A QLELI+KG+I  AK                D  +           +S      +WTSL
Sbjct: 121  ANQLELIMKGNIAKAKNLDEINLDESADLCDGDDSQC----------SSAEQLGENWTSL 170

Query: 4498 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 4322
            Q+SEAMS+L + +  +  +C+ CG  NPKIT P FGWFHV  +     RAN+I G+ ++ 
Sbjct: 171  QFSEAMSVLRKFLKKEYRKCQNCGYINPKITIPTFGWFHVKALSAAQARANVISGNDVSL 230

Query: 4321 LSMGKAKRNSTGKEENANDSSAMGDVDSTDAE--SSGVVYDGTPDSAQKVKGGYLYPEFL 4148
             S            E  +D  ++G+ D+TD E  +SG + +       K K         
Sbjct: 231  AS------------EIIHDDISLGNGDTTDVEDITSGDIANSNAKRHNKEK--------Q 270

Query: 4147 KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 3968
                  +G LLPS+V+  ++LLWEN+ +LC  I DIQ   +   G K  +SMFF+E + V
Sbjct: 271  ISSHTLAGSLLPSQVQRILELLWENDARLCLYISDIQGLGI---GKKAGHSMFFLENIYV 327

Query: 3967 PPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKIVPRWFDLQQSINV 3788
            PPIKFRPP+KG D V EH QTVLL +V+ SNISL   H+N+S+ S ++ RW DLQ+S+N+
Sbjct: 328  PPIKFRPPTKGDDKVSEHAQTVLLTRVLESNISLGQAHLNKSDASVVLRRWMDLQRSVNL 387

Query: 3787 LFGNSKTAG-LRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI 3611
            LF N   +G  ++++ TGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI
Sbjct: 388  LFDNKTASGESQKDLVTGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI 447

Query: 3610 PPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISR 3431
            PPYFALRLTYPERVTPWNV +LR+AI+NG E HPGAT Y DK +T+KLP +R+ R+  SR
Sbjct: 448  PPYFALRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTSTLKLPLDRRSRSLTSR 507

Query: 3430 KLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEK 3251
            +L SSRGV+   GK  ++E EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVL GEK
Sbjct: 508  RLQSSRGVIMHNGKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEK 567

Query: 3250 TLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQD 3071
            T+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQD
Sbjct: 568  TVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQD 627

Query: 3070 HIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPA 2891
            HIVSA LLTKKDTFL+ EE+N LLYSSGVS      F  KPGQK+ + NS++E+    PA
Sbjct: 628  HIVSAALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKIFMSNSDSEMFLFPPA 687

Query: 2890 ILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------GRK-------- 2753
            I KP P+WTGKQVI++LL +I  T+G  P TVEK+ KI   +F      G+K        
Sbjct: 688  IFKPEPLWTGKQVISALLYYI--TKGSPPFTVEKNAKIPSSFFKTRMREGKKRTKDTSIK 745

Query: 2752 ---SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQ 2582
                DE  LLI KN+LV GV+DKAQFG+YG+VHTVQEFYGS+TAG LLS LSRLFT FLQ
Sbjct: 746  KDEPDEDKLLIYKNDLVRGVVDKAQFGDYGIVHTVQEFYGSNTAGFLLSALSRLFTNFLQ 805

Query: 2581 MHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKA 2405
            MHGFTCGVDDLL+ +  D ER  +L+  ++IG+  H +FIG  EGD ID + +Q+ +EK 
Sbjct: 806  MHGFTCGVDDLLLTEGKDSERTNQLESCEEIGDIVHREFIGVMEGDNIDPITMQLNVEKK 865

Query: 2404 IRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVN 2228
            IR  GE+AIT LDR M S LN  TS  V  EL  +G+LKP  KN +SLMTTSGAKGS+VN
Sbjct: 866  IRSNGEAAITYLDRKMISNLNSRTSSGVLKELLSEGILKPSGKNWISLMTTSGAKGSMVN 925

Query: 2227 FTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHC 2048
            F QISS LGQQ+LEGKRVPRMVSGKTLPCF  WD + RAGGFI DRFLT LRPQEYYFHC
Sbjct: 926  FQQISSHLGQQELEGKRVPRMVSGKTLPCFTSWDCSPRAGGFIIDRFLTALRPQEYYFHC 985

Query: 2047 MAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHK 1868
            MAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGEDGVDVH+
Sbjct: 986  MAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQ 1045

Query: 1867 TSFVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSSLTKQQRHS 1688
            TSF+ KF+ L+ N+ ++        D   +S  YI +LP+AL+ K + F+   + +QR+S
Sbjct: 1046 TSFINKFEALSTNKELVYSNCCRELD---ESSPYINKLPDALKGKAEKFIRDSSSKQRNS 1102

Query: 1687 LHLRKRKDFXXXXXXXXXXXLAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTL 1508
              +    +F           LAQPGEPVGV+A+QSVG+P+TQMTLNTFH AG G MNVTL
Sbjct: 1103 GSM-THTNFLQLMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTL 1161

Query: 1507 GIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPF 1328
            GIPRLQEIL  AS  I+TP MTCPL   K+ +DA RLA  +KK++VADI+ES++V VVP 
Sbjct: 1162 GIPRLQEILTAASAHIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPV 1221

Query: 1327 SVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKI 1148
            +V+  ++ SIYKL MKL++P+ YP ++D+TL+D  +T+ V FV  LE+ I+ ++ +L+KI
Sbjct: 1222 TVQDGRICSIYKLMMKLHKPKHYPKYTDVTLKDWEETLRVSFVRGLEDAIENNIALLAKI 1281

Query: 1147 SGIKNIVLSAQSGSSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXDLGVDAQKRRRQ 968
            SGI N    AQ  SS   ++  +  K+                     DLG+DAQK +RQ
Sbjct: 1282 SGITNFKTDAQPNSSNGAEDDPSNGKTND--DDDDDDDGDADDTEGAEDLGLDAQKSKRQ 1339

Query: 967  ATDEMDYEDAXXXXXXXXXXXEQSV-GFESEIDQVDVEDD----NSVDGEIQIFDGEDES 803
              D++DY+D             + + G E   D   V+DD    +  DG+    DG D  
Sbjct: 1340 VVDDVDYDDGPEEETLEDGELSEDLEGVEDAKDNEHVKDDGDGKDDEDGKGD-EDGSDIE 1398

Query: 802  RRGPVXXXXXXXXXXXXXXXXXXXXXXXKDNDRAVFVEAKGLEFEVHFRFTNEPHILLAQ 623
                                        K  DR V+V+ +   FE+HF+FT+EPHILLAQ
Sbjct: 1399 VNENDKKVTLGVNYSQGPEENSKSQPVSKKFDRRVYVKFEKRHFEIHFKFTDEPHILLAQ 1458

Query: 622  ----IAQKTAKKVYIKRSGNIEQC--------SVIKHDNRDT-------------PALQT 518
                IAQKTA+KV I+  G + QC         VI +   D+             PALQT
Sbjct: 1459 LLSTIAQKTAEKVCIQNFGKVGQCKAITCKESGVIYYGEDDSKREEIPSSVKEKIPALQT 1518

Query: 517  AGVNFPAFWNMQDDLDIRNIVSNDIHAVLHTFGVEAARATIIKEVMNVFEPYGISVDIRH 338
            +G++F +FW MQDDL++R + SN++HA+L T+GVEAA+ TII+EV NVF+ YGISV+IRH
Sbjct: 1519 SGIHFKSFWEMQDDLNVRYVYSNNVHAILSTYGVEAAKETIIREVQNVFKSYGISVNIRH 1578

Query: 337  LSLIADFMTHSGGYRPMSRYG-MAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSAR 161
            L LIADFMTHSG YRPMSR G +A STSPF K+ FETAS FIVEAA HG+VD+L+SPSAR
Sbjct: 1579 LMLIADFMTHSGCYRPMSRKGSIADSTSPFLKICFETASNFIVEAACHGQVDNLDSPSAR 1638

Query: 160  ICLGLPVKMGTGCFDLMQKLQ 98
            ICLGLPVKMGTGC +L+QKL+
Sbjct: 1639 ICLGLPVKMGTGCHELIQKLE 1659


>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1628

 Score = 1707 bits (4421), Expect = 0.0
 Identities = 932/1693 (55%), Positives = 1154/1693 (68%), Gaps = 46/1693 (2%)
 Frame = -2

Query: 5038 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 4859
            MA   EGAT ++E+V FSFLTNEE+   S  K+T+  L +N+G P   GLYDPA GPL D
Sbjct: 1    MALANEGATNAIESVAFSFLTNEELLKSSRVKVTDTNLCNNIGHPVRGGLYDPAFGPLLD 60

Query: 4858 -RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKK 4682
             R+ C+SCG     C GH GHI+LVSPVYNPL+F  L  +L RTCF C++FR +R++VK+
Sbjct: 61   NRSNCESCGMSKDHCSGHFGHIELVSPVYNPLMFLFLGKILNRTCFSCHYFRASRDEVKR 120

Query: 4681 CALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVKGLPRQVPNYNSKNLKQHSWTS 4502
             A QLELI+KG+I  AK                D             ++       SWTS
Sbjct: 121  RASQLELILKGNISKAKSLGEIKLNETIDSVDDDD--------DDSQWSGAEQLGESWTS 172

Query: 4501 LQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLN 4325
            LQ+SEAMS++ E +     +C  CG  +PKIT P FG F+V  + +   RAN+I  +K  
Sbjct: 173  LQFSEAMSVIYEFLAKDYKKCLNCGCISPKITKPTFGRFNVKALSSVQARANVISSAK-- 230

Query: 4324 KLSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLK 4145
                                 +A    D  D  S G       +    +K        L 
Sbjct: 231  ---------------------AADVQADEEDITSGGAGNSNGNNQILSIK--------LV 261

Query: 4144 QKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVP 3965
            ++   SG LLPS+V+  +KLLW+NE++LCS I DIQ +     G K  +SMFF+E + VP
Sbjct: 262  EQSSLSGSLLPSQVQEMIKLLWKNESRLCSHISDIQDQGF---GKKAGHSMFFLENIFVP 318

Query: 3964 PIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKIVPRWFDLQQSINVL 3785
            PIKFRPP K GD+V EHPQTVLL+KV+ SNISL + H  +S+   I+ RW DLQ S+N+L
Sbjct: 319  PIKFRPPLKAGDNVAEHPQTVLLSKVLESNISLADAHRTKSDAYYILRRWQDLQGSVNLL 378

Query: 3784 FGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 3605
            F N KT+   +  A+GICQLL+KKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP
Sbjct: 379  FDN-KTSLRSQKDASGICQLLDKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 437

Query: 3604 YFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKL 3425
            YFALRLTYPERVTPWN  KL DAI+NG + HPGA  Y DK +T++L  ++ +R+S SR+L
Sbjct: 438  YFALRLTYPERVTPWNSAKLMDAILNGPDTHPGAILYTDKTSTLRLQKDKSLRSSTSRRL 497

Query: 3424 HSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTL 3245
             SSRGV+   GK  EHE EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVL GEKT+
Sbjct: 498  QSSRGVIMHHGKIHEHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTV 557

Query: 3244 RMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHI 3065
            RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQDHI
Sbjct: 558  RMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHI 617

Query: 3064 VSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAIL 2885
            VSA LLTKKDTFL+ +E+N LLYSSGVS      FS KPGQKV + NSE+E+    PAI 
Sbjct: 618  VSAALLTKKDTFLSCQEFNQLLYSSGVSMTGMGSFSCKPGQKVLMSNSESEMFLFPPAIF 677

Query: 2884 KPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF--------------GRKSD 2747
            KP P+WTGKQVI++LL +I  T+G  P TVEK+ KI   +F               RK D
Sbjct: 678  KPEPLWTGKQVISALLCYI--TKGRPPFTVEKNAKIPSSFFKTQTGEIKKHTKDTSRKKD 735

Query: 2746 EA--NLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2573
            E    LLI +N+LV GV+DKAQFG+YG+VHTVQEFYGS+TAGILLS LSRLFT FLQMHG
Sbjct: 736  ELEDKLLIYRNDLVRGVVDKAQFGDYGMVHTVQEFYGSNTAGILLSALSRLFTNFLQMHG 795

Query: 2572 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKAIRI 2396
            FTCGVDDLLI    D ER+ +L+  ++IG+  H +FIG  E + ID + +Q+ +EK IR 
Sbjct: 796  FTCGVDDLLIKVGKDSERLNQLESCEEIGDIVHREFIGVMESENIDPITMQLNVEKKIRS 855

Query: 2395 KGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQ 2219
             GE+AIT LDR M S LN  TS  V  EL  KG LKP  KN +SLMTTSGAKGS+VNF Q
Sbjct: 856  NGEAAITYLDRKMISNLNSRTSSGVLKELLSKGSLKPSGKNWISLMTTSGAKGSMVNFQQ 915

Query: 2218 ISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAG 2039
            ISS LGQQ+LEGKRVPRMVSGKTLPCFP WD + RAGGFI DRFLT LRPQEYYFHCMAG
Sbjct: 916  ISSHLGQQELEGKRVPRMVSGKTLPCFPSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAG 975

Query: 2038 REGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSF 1859
            REGLVDTAVKTSRSGYLQRCL+K+LE LKVCYDHTVRD+DGS++QF YGEDGVDVH+TSF
Sbjct: 976  REGLVDTAVKTSRSGYLQRCLMKNLESLKVCYDHTVRDSDGSIIQFHYGEDGVDVHQTSF 1035

Query: 1858 VTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSSLTKQQRHSLHL 1679
            + KF+ L+ N+ ++        D   +S  YI +LP+AL+ K ++F+   + +QR+S  +
Sbjct: 1036 INKFEALSINKELIYSNCCRQLD---RSSPYINKLPDALKGKAENFIRDFSSKQRNSSSM 1092

Query: 1678 RKRKDFXXXXXXXXXXXLAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIP 1499
             K  DF           LAQPGEPVGV+A+QSVG+P+TQMTLNTFH AG G MNVTLGIP
Sbjct: 1093 -KEADFLQVMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIP 1151

Query: 1498 RLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPFSVK 1319
            RL EI++ AS+ I+TP MTCPL   K+ +DA RLA  +KK++VADI+ES++V VVP +VK
Sbjct: 1152 RLHEIVVAASKNIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVAVK 1211

Query: 1318 KHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGI 1139
            + ++ SIYKL MKL++P+ YP ++D+TLED  +T+ V FV ELE+ I+ H+ +L++ISGI
Sbjct: 1212 EGRICSIYKLTMKLHKPKHYPKYTDVTLEDWEETLRVGFVRELEDAIENHISLLARISGI 1271

Query: 1138 KNIVLSAQSGSSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXDLGVDAQKRRRQATD 959
            K+    + S +  D D  +  + +Q                      G DAQK +++ATD
Sbjct: 1272 KDFQGKSNSSNGLDNDHSNESASNQNGQTDDDDEVGDTEDAEED---GFDAQKSKQRATD 1328

Query: 958  EMDYEDAXXXXXXXXXXXEQSVGFESEIDQVDVEDDNSV-----DGEIQIFDGEDESRRG 794
            E+DY+D            E+S   E   D  D EDDN V     D +I++ D +      
Sbjct: 1329 EVDYDDG---PEEETHDGEKSEDVEVSEDGKDDEDDNGVEVNGDDSDIEVNDSDKN---- 1381

Query: 793  PVXXXXXXXXXXXXXXXXXXXXXXXKDNDRAVFVEAKGLEFEVHFRFTNEPHILLAQIAQ 614
                                     K  DR V+V+A G+ FE+HF+F  EPHILLAQIAQ
Sbjct: 1382 -------VTLEETSKSKKRKFEPASKKYDRRVYVKAGGMRFEIHFKFIGEPHILLAQIAQ 1434

Query: 613  KTAKKVYIKRSGNIEQCSVI---------------KHDN------RDTPALQTAGVNFPA 497
            +TA+KV I+  G + QC  I               K D+         PALQT+G++F  
Sbjct: 1435 RTAEKVCIQNFGKVGQCKAITCKESGVIYYGEDDSKRDDIPSSVKEKIPALQTSGIHFKT 1494

Query: 496  FWNMQDDLDIRNIVSNDIHAVLHTFGVEAARATIIKEVMNVFEPYGISVDIRHLSLIADF 317
            FW M+DDL +R + SND+HA+L  +GVEAA+  II+EV NVF+ YGISV+IRHL LIADF
Sbjct: 1495 FWEMEDDLKVRYVYSNDVHAILKAYGVEAAKEVIIREVQNVFKSYGISVNIRHLMLIADF 1554

Query: 316  MTHSGGYRPMSRYGMAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSARICLGLPVK 137
            MTHSG YRP++R G+A STSPF K+S+ETAS FIVEAA HG+VD LE+PS+RICLGLPVK
Sbjct: 1555 MTHSGSYRPLTRSGIADSTSPFVKISYETASNFIVEAARHGQVDTLETPSSRICLGLPVK 1614

Query: 136  MGTGCFDLMQKLQ 98
            MGTGC DL+QKL+
Sbjct: 1615 MGTGCIDLIQKLE 1627


>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
            gi|482559195|gb|EOA23386.1| hypothetical protein
            CARUB_v10016563mg [Capsella rubella]
          Length = 1651

 Score = 1693 bits (4384), Expect = 0.0
 Identities = 913/1703 (53%), Positives = 1170/1703 (68%), Gaps = 57/1703 (3%)
 Frame = -2

Query: 5035 AYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDR 4856
            A TTEGA++ VE+V FSF+T ++VR  SF K+T+PILLDN+ RP P GLYDP MGPL D+
Sbjct: 4    AQTTEGASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVERPVPGGLYDPVMGPLNDK 63

Query: 4855 TLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCA 4676
              CKSCGQ    CPGHCGHI+LV P+Y+PLLF +L+N LQRTCFFC+HF      VKKC 
Sbjct: 64   EACKSCGQLRLGCPGHCGHIELVYPIYHPLLFSLLYNFLQRTCFFCHHFMAKPNDVKKCV 123

Query: 4675 LQLELIIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVKGLPRQVPNY-NSKNLKQHSWTSL 4499
             QL+LI+KGDIV AK                +     G+           +++   WTSL
Sbjct: 124  SQLKLIMKGDIVSAKQLEVKSDSTSTNSEDIEVSCESGVTNDSSQECEDPDMEDQRWTSL 183

Query: 4498 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPN-KYTRANIIKGSKLNK 4322
            Q++E  +++   M     EC +C AKNPK+  P FGW  +   N     AN+I+G K+ K
Sbjct: 184  QFAEVTAVMKNFMKLTSKECNKCKAKNPKLEKPMFGWVRMKGMNASAVGANLIRGLKVKK 243

Query: 4321 LSMGKAKRNSTGKEENANDSSAMGDVDS-TDAESSGVVYDGTPDSAQKVKGGYLYPEFLK 4145
                     ST   EN +DS     +D+ ++AE S        D  ++ K   +  EF K
Sbjct: 244  ---------STSSVENPDDSG----IDALSEAEDS--------DKEKREKSTEIAKEFEK 282

Query: 4144 QKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVP 3965
            QK+     LLPSEV+  +K LWENE + CS I D+ Q        K +YSMFF+E++LVP
Sbjct: 283  QKDT-KRDLLPSEVRAILKNLWENEHEYCSFIGDLWQS----GSEKIDYSMFFLESVLVP 337

Query: 3964 PIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKIVPRWFDLQQSINVL 3785
            PIKFRPP+KGGDSVMEHPQTV LNKV+ SNI+L N   N+ ++SK++ RW +LQ+S+NVL
Sbjct: 338  PIKFRPPTKGGDSVMEHPQTVGLNKVLLSNITLGNACTNKLDQSKVISRWMNLQESVNVL 397

Query: 3784 FGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 3605
            F +   +   +   +GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPY+AVNEIGIPP
Sbjct: 398  FDSKAASVQSQKDGSGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNEIGIPP 457

Query: 3604 YFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKL 3425
             FAL+L YPERVTPWNV KLR+AIING +VHPGATHY DKL+TVKLP + K RT+I+ KL
Sbjct: 458  CFALKLIYPERVTPWNVEKLREAIINGPDVHPGATHYSDKLSTVKLPSSVKERTAIANKL 517

Query: 3424 HSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTL 3245
             SSRG   + GK  +   EGKVVYR ++DGD+VLVNRQPTLHKPS+MAH+VRVL GEKTL
Sbjct: 518  LSSRGATTELGKTCDINFEGKVVYRQMRDGDVVLVNRQPTLHKPSLMAHIVRVLKGEKTL 577

Query: 3244 RMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHI 3065
            R+HYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQY  P++G+P R LIQDHI
Sbjct: 578  RLHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGDPLRALIQDHI 637

Query: 3064 VSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAIL 2885
            VS+VLLTK+DTFL  + +N LL+SSGV+      FS K G+KV++  S+AE+  ++PAIL
Sbjct: 638  VSSVLLTKRDTFLDKDLFNQLLFSSGVTDMVLSSFSGKSGKKVTISASDAELLTVMPAIL 697

Query: 2884 KPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKS--------------- 2750
            KPVP+WTGKQVIT++LN I  T+G  P TVEK+ K+  ++F  +S               
Sbjct: 698  KPVPLWTGKQVITTVLNLI--TKGHPPFTVEKATKLPVDFFKCRSREVKPNTGDLTKKKD 755

Query: 2749 ---------DEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLF 2597
                     +E  LLI+KNE V GVIDKAQF ++G+VHTV E YGS+ AG LLSV SRLF
Sbjct: 756  IDESWKQDLNEDKLLIRKNEFVCGVIDKAQFADFGMVHTVHELYGSNAAGNLLSVFSRLF 815

Query: 2596 TVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAK-EGDIDQMELQV 2420
            T FLQ+HGFTCGVDDL+I++++D ER K+LQ  +K+GE    K  G   +  ID  +++ 
Sbjct: 816  TAFLQIHGFTCGVDDLIILKDMDEERTKQLQECEKVGERVLRKTFGIDVDRQIDPQDMRS 875

Query: 2419 EIEKAIRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAK 2243
             IE+ +   GESA+  LDR + ++LN  +S  V ++L   GLLK   KNC+SLMT SGAK
Sbjct: 876  RIERILYEDGESALASLDRSIVNDLNQCSSKGVMNDLLSDGLLKTPGKNCISLMTISGAK 935

Query: 2242 GSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQE 2063
            GS VNF QISS LGQQ LEGKRVPRMVSGKTLPCF PWD + RAGGFI+DRFL+GLRPQE
Sbjct: 936  GSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQE 995

Query: 2062 YYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDG 1883
            YYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LE LKV YD TVRDADGS++QF YGEDG
Sbjct: 996  YYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDG 1055

Query: 1882 VDVHKTSFVTKFDTLAANQ-RVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSSLT 1706
            VDVH++SF+ KF  L  NQ  VL+R     ED    S  YI +LP +L++  + F+ ++ 
Sbjct: 1056 VDVHRSSFIGKFKELTVNQDMVLQRCS---EDMLSGSSSYISDLPISLKKDAEKFVEAMP 1112

Query: 1705 KQQRHSLHLRKRKDFXXXXXXXXXXXLAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLG 1526
              +R +    ++++            LAQPGEPVGV+AAQSVG+PSTQMTLNTFH AG G
Sbjct: 1113 MNERIASKFVRQEELLKLVKSKYFESLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRG 1172

Query: 1525 AMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIE 1346
             MNVTLGIPRLQEILM A+  I+TP+MTCPLL GKT +DA  +   L+K++VADI++ +E
Sbjct: 1173 EMNVTLGIPRLQEILMTAAADIKTPIMTCPLLKGKTKEDANDITDKLRKITVADIIKDME 1232

Query: 1345 VCVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHL 1166
            + VVP+++ K+ + SI+KLK+ LY+PE YP  +DIT ED  +TM+V+F+ +LE+ I+ H+
Sbjct: 1233 LSVVPYTIHKNDICSIHKLKINLYKPEHYPKNTDITEEDWEETMKVVFLRKLEDAIEIHM 1292

Query: 1165 IMLSKISGIKNIV--LSAQSGSSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXDLGV 992
             ML ++ GI+N V   S  +G+  D D   +G +++                    DLG 
Sbjct: 1293 KMLHRMRGIRNFVQDTSPTAGNETDNDNSISGKQTED---------DDDGEGTEVDDLGS 1343

Query: 991  DAQKRRRQATDEMDYED--AXXXXXXXXXXXEQSVGFESEIDQVDVEDDNSVDGEIQIFD 818
            DAQKR++QATDEMDYE+               +    ++E + V+V  + + + + ++  
Sbjct: 1344 DAQKRKKQATDEMDYEENSEDETNEPSSISGVEDPEIDNENEDVEVSKEGTPEQQKEVKK 1403

Query: 817  GEDESRRGPVXXXXXXXXXXXXXXXXXXXXXXXKDNDRAVFVEAKGLEFEVHFRF-TNEP 641
             ++  ++                           D DR +FV+ +G +FEVHF+F T+EP
Sbjct: 1404 VKNVKQQS----------------KKKRRKYVGADEDRHIFVKGEGEKFEVHFKFPTSEP 1447

Query: 640  HILLAQIAQKTAKKVYIKRSGNIEQCS--------VIKH-------------DNRDTPAL 524
            HILLAQIAQKTA+KVYI+ SG IE+C+        VI H             + + +PAL
Sbjct: 1448 HILLAQIAQKTAQKVYIQNSGKIERCTVANCGDPQVIYHGDDPKERREISNDEKKASPAL 1507

Query: 523  QTAGVNFPAFWNMQDDLDIRNIVSNDIHAVLHTFGVEAARATIIKEVMNVFEPYGISVDI 344
              +GV+FPA W  QD LD+R + SN IH +L+ FGVEAAR TII+E+ +VF+ YGISV I
Sbjct: 1508 HASGVDFPALWEFQDKLDVRYLYSNSIHDMLNIFGVEAARETIIREINHVFKSYGISVSI 1567

Query: 343  RHLSLIADFMTHSGGYRPMSRY-GMAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPS 167
            RHL+LIAD+MT SGGYRPMSR  G+A STSPF +M+FETA+ FIV+AA +GE D LE+PS
Sbjct: 1568 RHLNLIADYMTFSGGYRPMSRMGGIAESTSPFCRMTFETATKFIVQAATYGEKDTLETPS 1627

Query: 166  ARICLGLPVKMGTGCFDLMQKLQ 98
            ARICLGLP   GTGCFDLMQ+++
Sbjct: 1628 ARICLGLPALSGTGCFDLMQRVE 1650


>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
          Length = 1719

 Score = 1670 bits (4326), Expect = 0.0
 Identities = 922/1744 (52%), Positives = 1156/1744 (66%), Gaps = 101/1744 (5%)
 Frame = -2

Query: 5029 TTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTL 4850
            +TE  TE VEAV F F T+EE R  S  KITNP L+D LG+P P GLYDPAMG L++R++
Sbjct: 3    STECTTEVVEAVRFGFFTDEEARKHSLVKITNPNLVDILGKPCPGGLYDPAMGSLDERSI 62

Query: 4849 CKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQ 4670
            C+SCGQR++ C GHCGHI+LVS  YNPLLF  L N+L +TC +C  F  + E+ +    Q
Sbjct: 63   CESCGQRAYLCNGHCGHIELVSVAYNPLLFNTLSNILNKTCLYCLQFISSAEETENFVSQ 122

Query: 4669 LELIIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVKGLPRQVPNYNS-------------- 4532
            LELI KGD+ GAK                         R+    +               
Sbjct: 123  LELIRKGDLAGAKKLALGSSFKGKKKMVFVSTDDDTDEREDSQGSHMSHSAVLSDGENHF 182

Query: 4531 KNLKQHSWTSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPN--KYT 4358
            K+ +Q SW+S Q +EA+S+++E +  +  +C  C  + PKI+ P FGWF V      K  
Sbjct: 183  KDDEQASWSSAQLAEAISVMNEYLRRKGKKCMNCEMRCPKISKPTFGWFQVGGATSAKAI 242

Query: 4357 RANIIKGSKLNKLSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDS---- 4190
            R N+I+  KL++      + N + +  NA D S   D ++ ++ S     + T  S    
Sbjct: 243  RENVIRSHKLDESDSDGGEDNFSSEVVNAGDHSMNDDSETVESNSFIATSNSTKKSKKKG 302

Query: 4189 ---AQKVKGGYLYPEFLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSI 4019
               A+K+  G   P F     + SGPLLPS+V++ +KLLWE E   CS I DIQ+++   
Sbjct: 303  VNRAKKLNPGSGDPNF-----YLSGPLLPSQVRDILKLLWEKEASFCSYISDIQRQKCKP 357

Query: 4018 SGMKGNYSMFFIEALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSE 3839
             G K  YSMFF+E +LVPPI+FRPP+KGGDSVMEHPQTVLL KV+ SNI+L N HVN +E
Sbjct: 358  FGNKTGYSMFFLETVLVPPIRFRPPAKGGDSVMEHPQTVLLGKVLQSNIALGNAHVN-AE 416

Query: 3838 RSKIVPRWFDLQQSINVLFGNSKTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYAC 3662
            +SKI+ RW +LQQSINV F +     L +++   GICQ LEKKEGIFRQKMMGKRVN+AC
Sbjct: 417  KSKIISRWMELQQSINVYFDSKTATSLAQKDSIAGICQFLEKKEGIFRQKMMGKRVNFAC 476

Query: 3661 RSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKL 3482
            RSVISPDPYLAVNEIGIPPYFAL+LTYPERVTPWN  KLR A++NG ++HPGAT YVD +
Sbjct: 477  RSVISPDPYLAVNEIGIPPYFALKLTYPERVTPWNAAKLRGAVVNGPDIHPGATTYVDSV 536

Query: 3481 ATVKLPPNRKIRTSISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTL 3302
              VKLPP++K+R +ISRKL SSRGVV Q GK  + E EGK V+RHLQDGDIVLVNRQPTL
Sbjct: 537  TIVKLPPSQKMRVAISRKLPSSRGVVTQSGKFDDLEFEGKTVHRHLQDGDIVLVNRQPTL 596

Query: 3301 HKPSIMAHVVRVLSGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANN 3122
            HKPSIMAHVVRVL GE+TLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEA+NIVNAN 
Sbjct: 597  HKPSIMAHVVRVLHGERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANE 656

Query: 3121 QYILPTSGEPTRGLIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQ 2942
            QYI+PT G+  RGLIQDHIV AVLLT K+TF+   E+N LLY SGV A+          +
Sbjct: 657  QYIVPTKGDTVRGLIQDHIVGAVLLTMKNTFVNRSEFNQLLYGSGVFASGPGSLPKNNSR 716

Query: 2941 KVSVINSEAEIEPILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF 2762
            KV++I++E  +E +LPAI KP P+WTGKQVIT+LLNHI  TRG  P TVE  GKI K YF
Sbjct: 717  KVTLIDTEGVVESVLPAIWKPEPLWTGKQVITALLNHI--TRGCAPFTVENQGKIPKNYF 774

Query: 2761 -------GRKSD----EANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLS 2615
                   G + +    E NLL+ KNELV GVIDKAQFG++GLVHTVQE YG+ +AGI LS
Sbjct: 775  FGNSYTRGEEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGASSAGIFLS 834

Query: 2614 VLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDIDQ 2435
             LSR+FT+FLQ+HGFTCGVDDL+I+ + D +R +KL+  D +GE  H  F+  K G I  
Sbjct: 835  ALSRVFTLFLQIHGFTCGVDDLIILPDYDDQRKEKLEGED-VGEVVHCDFVKFKPGQIGP 893

Query: 2434 MELQVEIEKAIRIKGESAITQLDRMMSSELND-LT---SVVNSELFPKGLLKPFPKNCLS 2267
             ELQ+EIEK I    ESA   LD  M ++LN  LT   S +   L   GLLKPFPKNC+S
Sbjct: 894  DELQLEIEKVICTDRESATASLDMKMKNKLNSKLTREGSQILKHLLTAGLLKPFPKNCIS 953

Query: 2266 LMTTSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRF 2087
            +MTT+GAKGS VNF QIS+ LGQQ+LEGKRVPRMVSGKTLP FPPWD  SRAGGFITDRF
Sbjct: 954  VMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDFTSRAGGFITDRF 1013

Query: 2086 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVV 1907
            LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVK+LE LKVCYD+TVRDADGS+V
Sbjct: 1014 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLESLKVCYDYTVRDADGSIV 1073

Query: 1906 QFCYGEDGVDVHKTSFVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTK 1727
            QF YGEDG+DVH+TSF+  F  L  N+  + +   H    + + + YIK+LPE LE++ K
Sbjct: 1074 QFYYGEDGIDVHRTSFLNNFKALQDNRETICQKFQH----KREFNSYIKKLPEGLEEEAK 1129

Query: 1726 DFL-----SSLTKQQR------HSLHLRKRKD----------------FXXXXXXXXXXX 1628
             F+      SL KQ        HS    ++K+                F           
Sbjct: 1130 RFIQETQNKSLAKQSTSAGEGPHSSRKARKKEKLLKKEKAAAAYEQDAFLELVKQKYLSS 1189

Query: 1627 LAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIPRLQEILMRASETIQTPV 1448
            LAQ GEPVGVIAAQSVG+PSTQMTLNTFH AG G MNVTLGIPRLQEILM ASE I+TP+
Sbjct: 1190 LAQAGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMSASEVIKTPL 1249

Query: 1447 MTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPFSVKKHQVSSIYKLKMKLYRP 1268
            +TCP    ++  +   L + +KKVSVAD++E++E   V  SV     + +YKLKM L   
Sbjct: 1250 LTCPFSQWRSKREVVSLVSHVKKVSVADLIENME---VQLSVNHKTAARVYKLKMTLKDT 1306

Query: 1267 ELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDTDE 1088
            E       ++LE+  +T++  F+GELE+ I+ H++ LS++SGIKN   + +  SS + DE
Sbjct: 1307 EF------VSLENMHETLKTTFLGELEDAIENHVLYLSRLSGIKNFASNPKPKSSNEADE 1360

Query: 1087 GDTGSKSQQVXXXXXXXXXXXXXXXXXXDLGVDAQKRRRQATDEMDYEDAXXXXXXXXXX 908
             ++G  ++                    DLG D QKR++QATD+MDYED           
Sbjct: 1361 DESGLGTENA---GVNDDDDDDDDDKGDDLGSDVQKRKQQATDDMDYEDGSDGGAAEDDD 1417

Query: 907  XEQSVGFESEIDQVDVEDDNSVDGEIQIFDGEDESRRGPVXXXXXXXXXXXXXXXXXXXX 728
             +   G +S+++ ++ ED+   D E +  D +DE+    V                    
Sbjct: 1418 SDLEKG-KSDVENLE-EDETGKDEESEHTDDKDEASN--VQNEDEAISEGTKSSVGSSKG 1473

Query: 727  XXXKDND----------RAVFVEAKGLEFEVHFRFTNEPHILLAQIAQKTAKKVYIKRSG 578
                D            RA ++  KG +FEVHF F  EPH+L+AQ+AQKT+KKVYI++SG
Sbjct: 1474 KTSFDKSSVELKGKKIRRAFYMVVKGTKFEVHFEFHEEPHMLIAQLAQKTSKKVYIRKSG 1533

Query: 577  NIEQCSVIKH---------DNRDTP---------------ALQTAGVNFPAFWNMQDDLD 470
             + QC ++ +         DN   P               A++ +GV+F +FW M DDLD
Sbjct: 1534 KVSQCKMVSYDPDEKTVIWDNSKKPKRGESKSEEEDTSYWAVKASGVDFKSFWEMHDDLD 1593

Query: 469  IRNIVSNDIHAVLHTFGVEAARATIIKEVMNVFEPYGISVDIRHLSLIADFMTHSGGYRP 290
            +  + SN+IHA+L T+GVEAARATII+EV +VF+ YG+ +D RHLSLIAD MTH+G Y P
Sbjct: 1594 LSRLYSNNIHAMLTTYGVEAARATIIREVKHVFDIYGVKIDYRHLSLIADHMTHTGSYLP 1653

Query: 289  MSRYG-MAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSARICLGLPVKMGTGCFDL 113
            MSR+G ++ S SPF KMSFETAS FIVEAA HG  D L++PS+RICLGLPVKMGTG FD+
Sbjct: 1654 MSRHGSISESLSPFLKMSFETASKFIVEAASHGLTDKLDTPSSRICLGLPVKMGTGSFDV 1713

Query: 112  MQKL 101
            MQ+L
Sbjct: 1714 MQQL 1717


>ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
            gi|557103957|gb|ESQ44311.1| hypothetical protein
            EUTSA_v10005738mg [Eutrema salsugineum]
          Length = 1697

 Score = 1667 bits (4317), Expect = 0.0
 Identities = 917/1739 (52%), Positives = 1160/1739 (66%), Gaps = 93/1739 (5%)
 Frame = -2

Query: 5035 AYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDR 4856
            A T EGA++ VE+V FSF+T E+VR  S  K+TNP+LLDN+ RP P GLYDP MGPL+DR
Sbjct: 4    AQTIEGASQVVESVRFSFMTEEDVRKHSVMKVTNPVLLDNVERPVPGGLYDPLMGPLDDR 63

Query: 4855 TLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCA 4676
            T CKSCGQ S  CPGHCGHI+LV P+Y+PLLF +L+N LQRTCFFC+HF  N+  V++C 
Sbjct: 64   TSCKSCGQLSLVCPGHCGHIELVYPIYHPLLFNLLYNFLQRTCFFCHHFMANKNDVERCV 123

Query: 4675 LQLELIIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVKGLPRQVPNYNSKNLKQHSWTSLQ 4496
             QL+LI+KG++V AK                     +    +       ++ +  WTSLQ
Sbjct: 124  SQLKLIMKGNLVAAKQLDSRATDSSE--------ECEDSEMEKERCEDSDMGKQRWTSLQ 175

Query: 4495 YSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFH-VNMPNKYTRANIIKGSKLNKL 4319
            ++E   L++  +  +   C  C AK PK+  P FGW   V M      AN+I+G K+ K 
Sbjct: 176  FAEVTDLMNTFLRLKSKSCGSCKAKPPKLEKPMFGWVRIVGMSASAIGANVIRGIKVKK- 234

Query: 4318 SMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQK 4139
                    S    EN NDS      D +  ++   V DG+    +K K   +  EF K +
Sbjct: 235  --------SASSVENPNDS------DDSGIDALSEVEDGS--EKKKRKSSEVAEEFAKHQ 278

Query: 4138 EFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPI 3959
                  L PSEVK  +K LWENE + CS I D+ Q          +YSMFF+E +LVPP 
Sbjct: 279  NNTRRDLFPSEVKKILKGLWENEHEFCSFIGDLWQSESE----NVDYSMFFLENILVPPT 334

Query: 3958 KFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKIVPRWFDLQQSINVLFG 3779
            KFR P+KGGDSVMEHPQTV LNKV+ SNISL N   N+ ++ KI+ RW +LQ+S+NVLF 
Sbjct: 335  KFRAPTKGGDSVMEHPQTVGLNKVLESNISLGNACTNKLDQPKIISRWMNLQESVNVLF- 393

Query: 3778 NSKTAGLR-ENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY 3602
            +SKTA ++ +   TGICQ LEKKEG+FRQKMMGKRVN+ACRSVISPDP++AVN+IGIPP 
Sbjct: 394  DSKTATVKSQKEGTGICQTLEKKEGLFRQKMMGKRVNHACRSVISPDPFIAVNDIGIPPC 453

Query: 3601 FALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLH 3422
            FAL+LTYPERVTPWNV KLR+AIING ++HPGATHY DK++T+KLPP RK R +I+RKL 
Sbjct: 454  FALKLTYPERVTPWNVEKLREAIINGPDIHPGATHYSDKVSTMKLPPTRKARIAIARKLF 513

Query: 3421 SSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLR 3242
            SSRGV  + GK  +   EGKVVYRH+QDGD+VLVNRQPTLHKPSIMAH+VRVL GEKTLR
Sbjct: 514  SSRGVTTELGKTCDVNFEGKVVYRHMQDGDVVLVNRQPTLHKPSIMAHMVRVLKGEKTLR 573

Query: 3241 MHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQ---- 3074
            +HYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQY  P++G+P R LIQ    
Sbjct: 574  LHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYSRPSNGDPLRALIQVVHP 633

Query: 3073 ----------------------------DHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSA 2978
                                        DHIVS+VLLTK+DTFL  +E+N LL+SSGV+ 
Sbjct: 634  SYFFKSLYSFHELGCLPVIFMDLACTQQDHIVSSVLLTKRDTFLDKDEFNQLLFSSGVTD 693

Query: 2977 AARDFFSSKPGQKVSVINSEAEIEPILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLT 2798
                 FS + G+KV    S AE+  + PAILKPVP+WTGKQVIT++LN I  T+G  P +
Sbjct: 694  MVLSSFSGRSGKKVIQSASNAELLTVTPAILKPVPLWTGKQVITAVLNEI--TKGHPPFS 751

Query: 2797 VEKSGKIKKEYFGRKSDEAN------------------------------LLIQKNELVH 2708
            VEK+ K+  ++F  +S E                                LL++KNE V 
Sbjct: 752  VEKATKLPVDFFKCRSKEVKCKSGESNEKNHLTTKQDFDESWKKDLNEDKLLVRKNEFVR 811

Query: 2707 GVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHGFTCGVDDLLIVQELD 2528
            GVIDKAQF +YGLVHTV E YGS+ AG LLSV SRLFTVFLQ+ GFTCGVDDL+I++++D
Sbjct: 812  GVIDKAQFADYGLVHTVHELYGSNAAGNLLSVFSRLFTVFLQLQGFTCGVDDLIILKDMD 871

Query: 2527 MERMKKLQRSDKIGEEQHAKFIG-AKEGDIDQMELQVEIEKAIRIKGESAITQLDRMMSS 2351
             ER K+LQ  +++GE    K  G A +  ID  +++  IE+ +   GESA+  LDR + +
Sbjct: 872  GERTKQLQECEQVGERVLRKTFGIAVDVQIDPQDMKSRIERILYEDGESALASLDRSVVN 931

Query: 2350 ELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQISSLLGQQQLEGKRV 2174
            ELN  +S  V ++L   GLLKP  KNC+SLMT SGAKGS VNF QISS LGQQ LEGKRV
Sbjct: 932  ELNQCSSKGVMNDLLSDGLLKPPGKNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRV 991

Query: 2173 PRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSG 1994
            PRMVSGKTLPCF PWD + RAGGFI+DRFL+GLRPQEYYFHCMAGREGLVDTAVKTSRSG
Sbjct: 992  PRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSG 1051

Query: 1993 YLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVTKFDTLAANQ-RVL 1817
            YLQRCL+K+LE LKV YD TVRDADGS++QF YGEDGVDVH++SF+ KF  L  NQ  +L
Sbjct: 1052 YLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSFIGKFRELTVNQDMIL 1111

Query: 1816 ERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSSLTKQQRHSLHLRKRKDFXXXXXXXX 1637
            +R     ED    S  YI +LP  L+   + F+ ++   +R +  L +++D         
Sbjct: 1112 QRCS---EDMLSGSSSYITDLPITLKNGAEKFVEAMPMNERIASKLVRQEDLLKLVKSKF 1168

Query: 1636 XXXLAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIPRLQEILMRASETIQ 1457
               LAQPGEPVGV+AAQSVG+PSTQMTLNTFH AG G MNVTLGIPRLQEILM A+  I+
Sbjct: 1169 FASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAANIK 1228

Query: 1456 TPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPFSVKKHQVSSIYKLKMKL 1277
            TP+MTCPLL GKT DDAK++   L+K++VADI++S+EV V+P++V + +V SI+KLK+KL
Sbjct: 1229 TPIMTCPLLKGKTTDDAKKITDKLRKIAVADIIKSMEVSVIPYAVHEGEVCSIHKLKIKL 1288

Query: 1276 YRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGIKNIV-LSAQSGSSK 1100
            Y+PE YP  +DIT ED  +TM V+F+ +LE+ I+ H+ ML +I GIK+       SG+  
Sbjct: 1289 YKPEHYPKHTDITDEDWKETMTVMFLRKLEDAIEIHVKMLVRIRGIKSEKDTRPTSGNET 1348

Query: 1099 DTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXDLGVDAQKRRRQATDEMDYEDAXXXXXX 920
            D D+  +G  ++                    DLG DAQK+++QA D +DYE+       
Sbjct: 1349 DNDDSVSGKHTED------DDDDDEGEGTEVDDLGADAQKQKKQAVDVVDYEE-----NS 1397

Query: 919  XXXXXEQSVGFESEIDQVDVEDDNSVDGEIQIFDGEDES--RRGPVXXXXXXXXXXXXXX 746
                 E S     E  + D ED+N+     +  + ++++   +                 
Sbjct: 1398 EDEKDEPSSISGVEDPETDNEDENAEVSREETPEPQEDADVSKEETLEPQKEVKNVEEGS 1457

Query: 745  XXXXXXXXXKDNDRAVFVEAKGLEFEVHFRF-TNEPHILLAQIAQKTAKKVYIKRSGNIE 569
                       NDR +F + KG  FEVHF+F + EPHILL+QIAQKTA+KVYI+ SG IE
Sbjct: 1458 RKKRRKFVPGKNDRHIFAKFKGKTFEVHFKFLSEEPHILLSQIAQKTAQKVYIQNSGKIE 1517

Query: 568  QCSV--------------------IKHDNRD-TPALQTAGVNFPAFWNMQDDLDIRNIVS 452
            + +V                    I +D +  +PAL  +GV+F A W  QD LD+R + S
Sbjct: 1518 RSTVANCGDPQVIYYGDNPKEREEISNDEKKASPALHASGVDFLALWEYQDKLDVRYLYS 1577

Query: 451  NDIHAVLHTFGVEAARATIIKEVMNVFEPYGISVDIRHLSLIADFMTHSGGYRPMSRY-G 275
            N IH +L+TFGVEAAR TII+E+ +VF+ YGISV IRHL+LIAD+MT SGGYRPMSR  G
Sbjct: 1578 NSIHDMLNTFGVEAARETIIREINHVFKSYGISVSIRHLNLIADYMTFSGGYRPMSRMGG 1637

Query: 274  MAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSARICLGLPVKMGTGCFDLMQKLQ 98
            +A STSPF +M+FETA+ FIV+AA +GEVD LE+PSARICLGLP   GTGCFDL+Q+++
Sbjct: 1638 IAESTSPFCRMTFETATKFIVQAATYGEVDRLETPSARICLGLPALSGTGCFDLLQRME 1696


>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
            lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
            ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
          Length = 1678

 Score = 1658 bits (4293), Expect = 0.0
 Identities = 901/1697 (53%), Positives = 1150/1697 (67%), Gaps = 56/1697 (3%)
 Frame = -2

Query: 5020 GATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLCKS 4841
            GA++ VE+V FSF+T ++VR  SF K+T+PILLDN+G P P GLYDP +GP+ED+  C +
Sbjct: 22   GASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVGEPYPGGLYDPKLGPIEDKKACDT 81

Query: 4840 CGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLEL 4661
            CGQ +  CPGHCGHI+LV P+Y+PLLF +L+N LQRTCF C+HF      V++   QL+L
Sbjct: 82   CGQLNLACPGHCGHIELVYPIYHPLLFNLLYNFLQRTCFICHHFMAKPYDVERAVSQLKL 141

Query: 4660 IIKGDIVGAKXXXXXXXXXXXXXXXXDRVRVKGLPRQVPNYNSKNLKQHSWTSLQYSEAM 4481
            IIKGDIV AK                    V     +       +++   WTSLQ++E  
Sbjct: 142  IIKGDIVSAKQLESNTPTKSDSSDVSCESGVTTDSSE--GCEDSDMEDQRWTSLQFAEVT 199

Query: 4480 SLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNKLSMGKA 4304
            +++   M      C RC A NP++  P FGW  +  M      AN+I+G KL K      
Sbjct: 200  AVMKNFMRLSSKSCNRCKAVNPQLEKPMFGWVRMKAMKGSDIVANVIRGLKLKK------ 253

Query: 4303 KRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQKEFFSG 4124
               ST   EN +D       D +  ++   V DG  D   + K   +  EF +       
Sbjct: 254  ---STSSVENPDD------FDDSGIDALSEVEDG--DKETREKSTEVVKEFEEHNNSSKR 302

Query: 4123 PLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIKFRPP 3944
             LLP+EV+  +K LWENE   CS I D+ Q        K +YSMFF+E++LVPPIKFRP 
Sbjct: 303  DLLPTEVREILKDLWENEHDFCSFIGDLWQS----GSEKIDYSMFFLESVLVPPIKFRPS 358

Query: 3943 SKGGDSVMEHPQTVLLNKVMYSNISLCNEHVNRSERSKIVPRWFDLQQSINVLFGNSKTA 3764
            +KGGDSVMEHPQTV LNKV+ SNI L N   N+ ++SKI+ RW +LQ+S+NVLF +SKTA
Sbjct: 359  TKGGDSVMEHPQTVGLNKVLGSNIQLGNACTNKLDQSKIISRWMNLQESVNVLF-DSKTA 417

Query: 3763 GLR-ENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRL 3587
             ++ +   +GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPY+AVN+IGIPP FAL+L
Sbjct: 418  TVQSQREGSGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNDIGIPPCFALKL 477

Query: 3586 TYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLHSSRGV 3407
            TYPERVTPWNV KLR+AIING ++HPGATHY DKL+TVKLP   K R +I+RKL SSRG 
Sbjct: 478  TYPERVTPWNVEKLREAIINGPDIHPGATHYSDKLSTVKLPSTEKARRAIARKLLSSRGA 537

Query: 3406 VAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLRMHYAN 3227
              + GK  +   EGK V+RH++DGD+VLVNRQPTLHKPS+MAH+VRVL GEKTLR+HYAN
Sbjct: 538  TTELGKTCDINFEGKTVHRHMRDGDVVLVNRQPTLHKPSLMAHIVRVLRGEKTLRLHYAN 597

Query: 3226 CSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIVSAVLL 3047
            CSTYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQY  P++G+P R LIQDHIVS+VLL
Sbjct: 598  CSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGDPLRALIQDHIVSSVLL 657

Query: 3046 TKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILKPVPMW 2867
            TK+DTFL  + +N LL+SSGV+      FS + G+KV V  S+AE+  + PAILKPVP+W
Sbjct: 658  TKRDTFLDKDHFNQLLFSSGVTDMVLSSFSGRSGKKVMVSASDAELLTVTPAILKPVPLW 717

Query: 2866 TGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKS--------------------- 2750
            TGKQVIT++LN I  T+G  P TVEK+ K+  ++F  +S                     
Sbjct: 718  TGKQVITAVLNQI--TKGHPPFTVEKATKLPVDFFKCRSREVKPNSGDLTKKKKIDESWK 775

Query: 2749 ---DEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQM 2579
               +E  LLI+KNE V GVIDKAQF +YGLVHTV E YGS+ AG LLSV SRLFTVFLQ+
Sbjct: 776  QNLNEDKLLIRKNEFVCGVIDKAQFADYGLVHTVHELYGSNAAGNLLSVFSRLFTVFLQI 835

Query: 2578 HGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAK-EGDIDQMELQVEIEKAI 2402
            HGFTCGVDDL+I++++D ER K+LQ  + +GE    K  G   +  ID  +++  IE+ +
Sbjct: 836  HGFTCGVDDLIILKDMDEERTKQLQECENVGERVLRKTFGIDVDVQIDPQDMRSRIERIL 895

Query: 2401 RIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNF 2225
               GESA+  LDR + ++LN  +S  V ++L   GLLK    NC+SLMT SGAKGS VNF
Sbjct: 896  YEDGESALASLDRSIVNDLNQCSSKGVMNDLLSDGLLKTPGMNCISLMTISGAKGSKVNF 955

Query: 2224 TQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCM 2045
             QISS LGQQ LEGKRVPRMVSGKTLPCF PWD + RAGGFI+DRFL+GLRPQEYYFHCM
Sbjct: 956  QQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCM 1015

Query: 2044 AGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKT 1865
            AGREGLVDTAVKTSRSGYLQRCL+K+LE LK+ YD TVRDADGS++QF YGEDGVDVH++
Sbjct: 1016 AGREGLVDTAVKTSRSGYLQRCLMKNLESLKINYDCTVRDADGSIIQFQYGEDGVDVHRS 1075

Query: 1864 SFVTKFDTLAANQ-RVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSSLTKQQRHS 1688
            SF+ KF  LA NQ  VL+R     ED    ++ YI +LP +L+   + F+ ++   +R +
Sbjct: 1076 SFIEKFKELAINQDMVLQRCS---EDMLSGANSYISDLPISLKNGAEKFVEAMPMNERIA 1132

Query: 1687 LHLRKRKDFXXXXXXXXXXXLAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTL 1508
                ++++            LAQPGEPVGV+AAQSVG+PSTQMTLNTFH AG G MNVTL
Sbjct: 1133 SKFVRQEELLKLVKSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTL 1192

Query: 1507 GIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVCVVPF 1328
            GIPRLQEILM A+  I+TP+MTCPLL GKT +DA  +   L+K++VADI++S+++ VVP+
Sbjct: 1193 GIPRLQEILMTAAADIKTPIMTCPLLKGKTKEDANDITGKLRKITVADIIKSMDLSVVPY 1252

Query: 1327 SVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKI 1148
            +V K++V SI+KLK+ LY+PE YP  +DIT +D  +TM V+F+ +LE+ I+ H+ ML +I
Sbjct: 1253 TVYKNEVCSIHKLKINLYKPEHYPKHTDITEKDWEETMTVVFLRKLEDAIEIHMKMLHRI 1312

Query: 1147 SGIKNIVLSAQSGSSKDTDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXDLGVDAQKRRRQ 968
             GI N     ++G+  D D+  +G +++                    DLG DAQK+++Q
Sbjct: 1313 RGICN-DKGPEAGNETDNDDSVSGKQNKD-------DGDDDGEGTEVDDLGSDAQKQKKQ 1364

Query: 967  ATDEMDY----EDAXXXXXXXXXXXEQSVGFESEIDQVDVEDDNSVDGEIQIFDGEDESR 800
             TDEMDY    ED            +  +  E+E  +V  ED      E  +   E    
Sbjct: 1365 VTDEMDYEENSEDETNEPSSISGVEDPEMDSENEDAEVSKEDTPEPQEEADVSKEETMEP 1424

Query: 799  RGPVXXXXXXXXXXXXXXXXXXXXXXXKDNDRAVFVEAKGLEFEVHFRF-TNEPHILLAQ 623
            +  V                         +DR +FV  +G +FEVHF+F T++PHILLAQ
Sbjct: 1425 QKEV----KAVKNVKEQSKKKRRKFVGATSDRHIFVRGEGEKFEVHFQFATDDPHILLAQ 1480

Query: 622  IAQKTAKKVYIKRSGNIEQCS--------VIKH-------------DNRDTPALQTAGVN 506
            IAQKTA+KVYI+ SG IE+C+        VI H             + + +PAL  +GV+
Sbjct: 1481 IAQKTAQKVYIQDSGKIERCTVANCGDPQVIYHGDNPKERREISNDEKKASPALHASGVD 1540

Query: 505  FPAFWNMQDDLDIRNIVSNDIHAVLHTFGVEAARATIIKEVMNVFEPYGISVDIRHLSLI 326
            FPA W  QD LD+R + SN IH +L+ FGVEAAR TII+E+ +VF+ YGISV IRHL+LI
Sbjct: 1541 FPALWEFQDKLDVRYLYSNSIHDMLNVFGVEAARETIIREINHVFKSYGISVSIRHLNLI 1600

Query: 325  ADFMTHSGGYRPMSRY-GMAVSTSPFSKMSFETASTFIVEAAYHGEVDDLESPSARICLG 149
            AD+MT SGGYRPMSR  G+A STSPF +M+FETA+ FIV+AA +GE D LE+PSARICLG
Sbjct: 1601 ADYMTFSGGYRPMSRMGGIAESTSPFCRMTFETATKFIVQAATYGEKDTLETPSARICLG 1660

Query: 148  LPVKMGTGCFDLMQKLQ 98
            LP   GTGCFDLMQ+++
Sbjct: 1661 LPALSGTGCFDLMQRVE 1677