BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00002164
         (1844 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22720.3| unnamed protein product [Vitis vinifera]              692   0.0  
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...   660   0.0  
ref|XP_007038704.1| RNA polymerase III subunit RPC82 family prot...   591   e-166
ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citr...   575   e-161
ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III s...   565   e-158
ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III s...   560   e-157
ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s...   559   e-156
emb|CBI26210.3| unnamed protein product [Vitis vinifera]              554   e-155
gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Mor...   539   e-150
ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protei...   499   e-138
ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phas...   496   e-137
ref|XP_006589539.1| PREDICTED: DNA-directed RNA polymerase III s...   490   e-136
ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III s...   488   e-135
ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prun...   488   e-135
ref|XP_002510780.1| DNA-directed RNA polymerase III 62 kDa polyp...   486   e-134
ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III s...   486   e-134
ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III s...   483   e-133
ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III s...   483   e-133
ref|XP_006490401.1| PREDICTED: DNA-directed RNA polymerase III s...   473   e-130
ref|XP_006421932.1| hypothetical protein CICLE_v10004721mg [Citr...   473   e-130

>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  692 bits (1786), Expect = 0.0
 Identities = 361/533 (67%), Positives = 430/533 (80%), Gaps = 4/533 (0%)
 Frame = +2

Query: 41   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 220
            M +Q+G++LAV+LISSHFG+LV+KVC+CLLRKGTLTL  + R+TE+P QQVK+ +LVLIQ
Sbjct: 1    MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 221  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 400
            HNCVQAFAIQQE GFG  PRVVTQY  +F NILHR+RF+KFL IVS+ L KEC E+LEGL
Sbjct: 61   HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120

Query: 401  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSEDE 580
            LQHGRLTLEQI+ RA SN++EG    QDALR SF++LV A +VERCPA+EPFLAPPSE+E
Sbjct: 121  LQHGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEE 180

Query: 581  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 760
            TP A KRGAKSAKL+EE  T+EQRA  AA P++A+RFS+  +TGTDV        D P  
Sbjct: 181  TP-ARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTDV-------DDSPNV 232

Query: 761  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 940
            T GEKRK + LE+D +  A+ CEK+VLWRANFEEFVR LR KAC+ NV++RLDD A IVL
Sbjct: 233  TAGEKRKQDALELDKETGAS-CEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVL 291

Query: 941  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNARG 1120
            +AMLEATR  EKK KTE S PLSMD I E VMKSE GRSMT+E VR +L QLGC P  RG
Sbjct: 292  SAMLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRG 351

Query: 1121 -TESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQISDTAFVDK 1297
              ESYSVD+KNIIE+AQN+EVES  LKRYGRDAYR+FRLLSK+ RL+ TD+ISDT FV+K
Sbjct: 352  AAESYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTTFVEK 411

Query: 1298 KEALKILYNLWKDDYLYKEKIVLHGSTQVPLLLWKVNKHSLRERILDEMYHAALNLSQRM 1477
            K+  KILY LWKD+YL  EK+ LHGS Q   LLWKV K +L   +L+EMYH+ALNLS R+
Sbjct: 412  KDTAKILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRV 471

Query: 1478 VHELEQEHEILV---DKRVGAQGKRFDRIKKVKILLESSLMKLDDALMLFHDF 1627
             +ELEQE EI+    +KRVGA G RF+R++KV+ILLESSLMKLDDA+MLF+DF
Sbjct: 472  AYELEQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 524


>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
            vinifera]
          Length = 511

 Score =  660 bits (1702), Expect = 0.0
 Identities = 353/533 (66%), Positives = 421/533 (78%), Gaps = 4/533 (0%)
 Frame = +2

Query: 41   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 220
            M +Q+G++LAV+LISSHFG+LV+KVC+CLLRKGTLTL  + R+TE+P QQVK+ +LVLIQ
Sbjct: 1    MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 221  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 400
            HNCVQAFAIQQE      PRVVTQY  +F NILHR+RF+KFL IVS+ L KEC E+LEGL
Sbjct: 61   HNCVQAFAIQQEA-----PRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 115

Query: 401  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSEDE 580
            LQHGRLTLEQI+ RA SN+ E     QDALR SF++LV A +VERCPA+EPFLAPPSE+E
Sbjct: 116  LQHGRLTLEQILDRAKSNQRE--PVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEE 173

Query: 581  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 760
            TP A KRGAKSAKL+EE  T+EQRA  AA P++A+RFS+  +TGTDV        D P  
Sbjct: 174  TP-ARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTDVD-------DSP-- 223

Query: 761  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 940
                 RK + LE+D +  A+ CEK+VLWRANFEEFVR LR KAC+ NV++RLDD A IVL
Sbjct: 224  ----NRKQDALELDKETGAS-CEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVL 278

Query: 941  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNARG 1120
            +AMLEATR  EKK KTE S PLSMD I E VMKSE GRSMT+E VR +L QLGC P  RG
Sbjct: 279  SAMLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRG 338

Query: 1121 T-ESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQISDTAFVDK 1297
              ESYSVD+KNIIE+AQN+EVES  LKRYGRDAYR+FRLLSK+ RL+ TD+ISDT FV+K
Sbjct: 339  AAESYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTTFVEK 398

Query: 1298 KEALKILYNLWKDDYLYKEKIVLHGSTQVPLLLWKVNKHSLRERILDEMYHAALNLSQRM 1477
            K+  KILY LWKD+YL  EK+ LHGS Q   LLWKV K +L   +L+EMYH+ALNLS R+
Sbjct: 399  KDTAKILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRV 458

Query: 1478 VHELEQEHEILV---DKRVGAQGKRFDRIKKVKILLESSLMKLDDALMLFHDF 1627
             +ELEQE EI+    +KRVGA G RF+R++KV+ILLESSLMKLDDA+MLF+DF
Sbjct: 459  AYELEQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 511


>ref|XP_007038704.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1
            [Theobroma cacao] gi|508775949|gb|EOY23205.1| RNA
            polymerase III subunit RPC82 family protein, putative
            isoform 1 [Theobroma cacao]
          Length = 523

 Score =  591 bits (1523), Expect = e-166
 Identities = 320/530 (60%), Positives = 397/530 (74%), Gaps = 1/530 (0%)
 Frame = +2

Query: 41   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 220
            MV+QHGIK AV LI++HFG LV+KVCECLLRKG LTL  I R+TE+ S QVKN LLVLIQ
Sbjct: 1    MVTQHGIKYAVLLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQ 60

Query: 221  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 400
            HNCVQAF ++Q G  G   ++ +QY  +F NI+HR RF KFL IVS+ L K+CVEL+E L
Sbjct: 61   HNCVQAFILEQPGSHGDGAKLNSQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELIEAL 120

Query: 401  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSEDE 580
            L HGRLTL+Q+  RA S +NEG+    DA+R +F++L+NA +VERCPAAEP L  P+E+E
Sbjct: 121  LLHGRLTLKQMSDRAKSAQNEGDDVILDAVREAFIKLLNAHFVERCPAAEPVLTKPTEEE 180

Query: 581  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 760
            T SA KR  KSAK++E + T+EQR   AATP EA RF + T T        K   +    
Sbjct: 181  T-SARKRVPKSAKILEGKETLEQRVLEAATPSEALRFLLVTRT-EPAADGGKDENNSSSM 238

Query: 761  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 940
            TVG+KRK + LE +++  AT  E+ VLWRANFEEF+R LR KA + NVR+ LDD A IV+
Sbjct: 239  TVGKKRKLDALESETEGEAT-DEQVVLWRANFEEFIRRLRHKAFIENVRACLDDGAVIVI 297

Query: 941  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNARG 1120
            +AMLEATR  EKK KTE S PLS+++I EEV+KSEEGR++T + VRA+L QL C P  + 
Sbjct: 298  SAMLEATRTAEKKVKTENSVPLSLNSIYEEVIKSEEGRNITFDRVRASLVQLSCPPFVKA 357

Query: 1121 -TESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQISDTAFVDK 1297
              ESYS+D K IIE+AQN+EVES VLKRYGRDAYRMFRLLS   RL+ TD+I+DTAFV+K
Sbjct: 358  VNESYSIDFKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSSTARLLETDKIADTAFVEK 417

Query: 1298 KEALKILYNLWKDDYLYKEKIVLHGSTQVPLLLWKVNKHSLRERILDEMYHAALNLSQRM 1477
            K+  KILY LWKDDYL+ EK+ L G+ Q   LLWKVNK++L E +LDEM+HAALNLS R+
Sbjct: 418  KDTTKILYKLWKDDYLHMEKLQLTGARQSQFLLWKVNKNTLWEHVLDEMFHAALNLSLRV 477

Query: 1478 VHELEQEHEILVDKRVGAQGKRFDRIKKVKILLESSLMKLDDALMLFHDF 1627
             HELEQE E+L       Q KR +R++KV++LLESS MKLDDA+MLFHDF
Sbjct: 478  AHELEQEKELL----NLPQDKRVNRLRKVRLLLESSQMKLDDAIMLFHDF 523


>ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
            gi|568874593|ref|XP_006490399.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC3-like isoform X1 [Citrus
            sinensis] gi|557523806|gb|ESR35173.1| hypothetical
            protein CICLE_v10004721mg [Citrus clementina]
          Length = 527

 Score =  575 bits (1483), Expect = e-161
 Identities = 305/533 (57%), Positives = 399/533 (74%), Gaps = 4/533 (0%)
 Frame = +2

Query: 41   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 220
            M++++G K AV++I++HFG LV+KVCECLLRKG LT   + RYTE+  +QVKN LLVLIQ
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 221  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 400
             NCVQAF  +Q  GF   P+  TQY V+F+NILHR+RF+KFL I+S+   ++CVEL++GL
Sbjct: 61   QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 401  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSEDE 580
            L+HGRLTL+Q+  RA S++ EGN    D+LR + V+LV A YVERCPA+EP L P SE+E
Sbjct: 121  LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 180

Query: 581  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 760
             P A K+G+KSAK I E  T+EQ+   AA P+EA RFS+ T+  +DV  + K+  +  P 
Sbjct: 181  GP-ARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP- 238

Query: 761  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 940
              GEKRKH+ LE+D   +A   E+ V++RANFE F+R LR K C+ +VR+ LDD A  VL
Sbjct: 239  --GEKRKHDVLELDECGVAD--EQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVL 294

Query: 941  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLG-CHPNAR 1117
            +AML+AT   EKK KT+ S PLS+ +I EEV+KSE GR+MT++HVRA+L QLG       
Sbjct: 295  SAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLGELSFVDA 354

Query: 1118 GTESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQISDTAFVDK 1297
             ++SYS+D + IIE+AQNEEVES V KRYGRDAYR+FRLLSK+GRL+ TD+ISDT FV+K
Sbjct: 355  SSDSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEK 414

Query: 1298 KEALKILYNLWKDDYLYKEKIVLHGSTQVPLLLWKVNKHSLRERILDEMYHAALNLSQRM 1477
            K+A KILY LWKD YL  EK+V+ G+ Q   LLWKVN+  L + +LDEM+HAALNLS R+
Sbjct: 415  KDAPKILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWKHVLDEMFHAALNLSLRV 474

Query: 1478 VHELEQEHEIL---VDKRVGAQGKRFDRIKKVKILLESSLMKLDDALMLFHDF 1627
             +EL++E E+L    DKR G    R++RI+KV+ILLESS MKLDDA++LFHDF
Sbjct: 475  SYELDREKELLNLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAILLFHDF 527


>ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X2 [Citrus sinensis]
          Length = 512

 Score =  565 bits (1455), Expect = e-158
 Identities = 301/532 (56%), Positives = 392/532 (73%), Gaps = 3/532 (0%)
 Frame = +2

Query: 41   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 220
            M++++G K AV++I++HFG LV+KVCECLLRKG LT   + RYTE+  +QVKN LLVLIQ
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 221  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 400
             NCVQAF  +Q  GF   P+  TQY V+F+NILHR+RF+KFL I+S+   ++CVEL++GL
Sbjct: 61   QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 401  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSEDE 580
            L+HGRLTL+Q+  RA S++ EGN    D+LR + V+LV A YVERCPA+EP L P SE+E
Sbjct: 121  LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 180

Query: 581  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 760
             P A K+G+KSAK I E  T+EQ+   AA P+EA RFS+ T+  +DV  + K+  +  P 
Sbjct: 181  GP-ARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP- 238

Query: 761  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 940
              GEKRKH+ LE+D   +A   E+ V++RANFE F+R LR K C+ +VR+ LDD A  VL
Sbjct: 239  --GEKRKHDVLELDECGVAD--EQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVL 294

Query: 941  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNARG 1120
            +AML+AT   EKK KT+ S PLS+ +I EEV+KSE GR+MT++HVRA+L QL        
Sbjct: 295  SAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQL-------- 346

Query: 1121 TESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQISDTAFVDKK 1300
                  D + IIE+AQNEEVES V KRYGRDAYR+FRLLSK+GRL+ TD+ISDT FV+KK
Sbjct: 347  ------DFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEKK 400

Query: 1301 EALKILYNLWKDDYLYKEKIVLHGSTQVPLLLWKVNKHSLRERILDEMYHAALNLSQRMV 1480
            +A KILY LWKD YL  EK+V+ G+ Q   LLWKVN+  L + +LDEM+HAALNLS R+ 
Sbjct: 401  DAPKILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWKHVLDEMFHAALNLSLRVS 460

Query: 1481 HELEQEHEIL---VDKRVGAQGKRFDRIKKVKILLESSLMKLDDALMLFHDF 1627
            +EL++E E+L    DKR G    R++RI+KV+ILLESS MKLDDA++LFHDF
Sbjct: 461  YELDREKELLNLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAILLFHDF 512


>ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
            tuberosum]
          Length = 525

 Score =  560 bits (1443), Expect = e-157
 Identities = 308/535 (57%), Positives = 389/535 (72%), Gaps = 6/535 (1%)
 Frame = +2

Query: 41   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 220
            MVS HGIKLAV LISS+FG L +KVC+CLLR+GT TL ++   TE+    VKN LLVLI 
Sbjct: 1    MVSPHGIKLAVYLISSYFGDLNAKVCDCLLRRGTQTLYQVVSSTELTRTNVKNCLLVLIH 60

Query: 221  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 400
            HNCVQAFA+QQ GGFG +P+V+TQY  +F+NI+H+LRF KF+ IVS+ +GKEC E+ EGL
Sbjct: 61   HNCVQAFALQQPGGFGEEPKVITQYMALFDNIIHKLRFPKFIEIVSEEMGKECEEIFEGL 120

Query: 401  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSEDE 580
            LQHGRLTL +II R      +G+S+  DA R SF  LVNAR+VERCPA +P L PP+ +E
Sbjct: 121  LQHGRLTLTEIIERYKEASKQGDSS-ADAARDSFNSLVNARFVERCPAPDPLLEPPAAEE 179

Query: 581  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 760
            T +A KRGAKSAK+  +  T+EQ+A  AA P+E+ RF +      D+ +++    D   T
Sbjct: 180  T-AAKKRGAKSAKI--QAQTMEQQALAAAAPMESMRFLV-----EDIWNDSVERADKRTT 231

Query: 761  TV--GEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGI 934
             V  G KRK   LE ++K  AT  +KEVLWRANFEEF+R LR KACV NV+ R++++A +
Sbjct: 232  DVKCGMKRKQGDLESNTKDSAT-GKKEVLWRANFEEFIRRLRHKACVANVKVRVNNDAAV 290

Query: 935  VLNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCH-PN 1111
            VL A LE +R  E K + + S P S++AI +EV+K E G  M +E +RA+L  LGC  P 
Sbjct: 291  VLAATLELSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIRASLDDLGCEAPL 350

Query: 1112 ARGTESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQISDTAFV 1291
                E+YSVD+KNIIE A+ EEVES VLKRYGR+AYRMFRLLSKA RLV TD+ISDT FV
Sbjct: 351  MEIDETYSVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDKISDTTFV 410

Query: 1292 DKKEALKILYNLWKDDYLYKEKIVLHGSTQVPLLLWKVNKHSLRERILDEMYHAALNLSQ 1471
            +KK+A+KIL+ LWKDDYL  +K++   + Q   +LWK+NK SL E ILDEMYHAALNL  
Sbjct: 411  EKKDAVKILFKLWKDDYLEMKKVIARAAKQSEFILWKINKQSLWEHILDEMYHAALNLRL 470

Query: 1472 RMVHELEQEHEIL---VDKRVGAQGKRFDRIKKVKILLESSLMKLDDALMLFHDF 1627
            R+ HE EQE EIL    DK VG  G ++ R++KV I+LESSLM LDD+LMLFHDF
Sbjct: 471  RITHEKEQEKEILQMPKDKLVGELGNKYMRLRKVCIVLESSLMNLDDSLMLFHDF 525


>ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
            lycopersicum]
          Length = 525

 Score =  559 bits (1440), Expect = e-156
 Identities = 308/533 (57%), Positives = 386/533 (72%), Gaps = 4/533 (0%)
 Frame = +2

Query: 41   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 220
            MVS HGIKLAV LISS+FG L +KVC+CLLR+GT TL ++   TE+  + VKN LLVLI 
Sbjct: 1    MVSPHGIKLAVYLISSYFGELNAKVCDCLLRRGTQTLHQVVSSTELSRKNVKNCLLVLIH 60

Query: 221  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 400
            HNCVQAFAI+Q GGFG + +++TQY  +F+NI+H+LRF KF+ IVS+ LGKEC E+LE L
Sbjct: 61   HNCVQAFAIRQPGGFGEEAKIITQYMALFDNIIHKLRFPKFIEIVSEELGKECEEILEWL 120

Query: 401  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSEDE 580
            LQHGRL+L QII++      +G+S+  DA + SF +LVNAR+VERCPA +P L PP+E+E
Sbjct: 121  LQHGRLSLSQIIVKYKQASKQGDSS-ADAAQDSFNRLVNARFVERCPAPDPLLEPPAEEE 179

Query: 581  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 760
            T +A KRGAKSAK+  +  T+EQ+A  AA P+E+ RF +       V    K   D    
Sbjct: 180  T-AAKKRGAKSAKI--QAQTMEQQALAAAAPMESMRFLVENIWNDSVEKADKRTTD---V 233

Query: 761  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 940
              G KRK E LE ++K  AT  EKEVLWRANFEEF+R LR KACV NV+ R++++A IVL
Sbjct: 234  KCGMKRKQEDLESNTKDPAT-GEKEVLWRANFEEFIRRLRHKACVANVKVRVNNDAAIVL 292

Query: 941  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCH-PNAR 1117
             A LE +R  E K + + S P S++AI +EV+K E G  M +E +RA+L  LGC  P   
Sbjct: 293  AATLELSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIRASLDDLGCEAPLME 352

Query: 1118 GTESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQISDTAFVDK 1297
              E+YSVD+KNIIE A+ EEVES VLKRYGR+AYRMFRLLSKA RLV TD+ISDT FV+K
Sbjct: 353  IDETYSVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDKISDTTFVEK 412

Query: 1298 KEALKILYNLWKDDYLYKEKIVLHGSTQVPLLLWKVNKHSLRERILDEMYHAALNLSQRM 1477
            K+A+KIL+ LWKDDYL  +K++     Q   +LWK+NK SL E ILDEMYHAALNL  R 
Sbjct: 413  KDAVKILFKLWKDDYLEMKKVIARAPKQSEFILWKINKQSLWEHILDEMYHAALNLRLRT 472

Query: 1478 VHELEQEHEIL---VDKRVGAQGKRFDRIKKVKILLESSLMKLDDALMLFHDF 1627
             HE EQE EIL    DK VG  G ++ R++KV I+LESSLM LDD+LMLFHDF
Sbjct: 473  THEKEQEKEILQMPKDKLVGELGNKYMRLRKVCIVLESSLMNLDDSLMLFHDF 525


>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  554 bits (1427), Expect = e-155
 Identities = 304/530 (57%), Positives = 381/530 (71%), Gaps = 1/530 (0%)
 Frame = +2

Query: 41   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 220
            M  ++GIKLAV+LIS+ FG   +KVC+CLLRKGTL L +I R  ++  QQVK YL VLIQ
Sbjct: 1    MTPEYGIKLAVHLISTDFGDHAAKVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQ 60

Query: 221  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 400
            HNCVQAFA++ EGG G  P VVTQY ++F+NILHR+RF K L IVSK L KEC EL E  
Sbjct: 61   HNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAF 120

Query: 401  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSEDE 580
            L+HG LTL+QI+ R  SN+NEGN   QDALR SF +LVNA YVERCPA +PFL PP E++
Sbjct: 121  LKHGWLTLQQILDRVPSNQNEGNCTVQDALRGSFTKLVNAHYVERCPAPDPFLVPPDEEK 180

Query: 581  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 760
            TP A K  A SAK +EE    EQ     ATP +A+ F + TDT  D+  + KS G+PP  
Sbjct: 181  TP-ARKHDANSAKAVEELEIGEQCDIAKATPSKAKGFPVITDTCGDINGD-KSIGNPPGV 238

Query: 761  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 940
             +G+KRK + L++D++  A   EK+V WRAN++E V  LR KAC+ NVR+RLD  A IVL
Sbjct: 239  VIGKKRKQDALKLDTESGAA-SEKDVPWRANYKELVCHLRHKACIENVRARLDSGAAIVL 297

Query: 941  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNARG 1120
            +AMLEAT+  EK  K E S  LS+  I E VM+SE G SMT+E +RA+L QLGCHPN  G
Sbjct: 298  SAMLEATQSAEKNVKEEISVLLSISTITEAVMQSEAGCSMTLERIRASLVQLGCHPNGVG 357

Query: 1121 TE-SYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQISDTAFVDK 1297
             + +Y++D+K IIE+AQN+EVES VLKRYGR+A+R+FRLLSK+   + T +ISDT F++K
Sbjct: 358  ADRTYNIDLKKIIELAQNDEVESMVLKRYGREAHRIFRLLSKSCCPLETTKISDTTFIEK 417

Query: 1298 KEALKILYNLWKDDYLYKEKIVLHGSTQVPLLLWKVNKHSLRERILDEMYHAALNLSQRM 1477
            KEA KILY LWKD+ L+ EKIVL+ S Q   +LWKV K +    ILDEMYHAALNLS ++
Sbjct: 418  KEAAKILYKLWKDECLHMEKIVLNESRQSQFMLWKVKKDTFWRHILDEMYHAALNLSIQI 477

Query: 1478 VHELEQEHEILVDKRVGAQGKRFDRIKKVKILLESSLMKLDDALMLFHDF 1627
            +       E+  DK VGA  +R  R+    ILL++SLMKLDDALMLFHDF
Sbjct: 478  I-------ELRRDKHVGALRERDVRL---AILLQASLMKLDDALMLFHDF 517


>gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Morus notabilis]
          Length = 564

 Score =  539 bits (1388), Expect = e-150
 Identities = 315/578 (54%), Positives = 383/578 (66%), Gaps = 49/578 (8%)
 Frame = +2

Query: 41   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 220
            M + +GIK AV+LI+SHFG+LV+ VCE LLRKG LTL ++ R+TE+   Q+KN LL+LIQ
Sbjct: 1    MATPYGIKFAVHLITSHFGNLVANVCENLLRKGPLTLQQLIRFTELTPLQIKNSLLILIQ 60

Query: 221  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 400
            HNCVQ F+ +Q G  G + +V TQY V+F+NILHRLRF KFL IVS+ L K C E+LEGL
Sbjct: 61   HNCVQPFSSEQIGAGGNEVKV-TQYLVLFDNILHRLRFPKFLEIVSEELDKNCGEILEGL 119

Query: 401  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSEDE 580
            LQHGRLTLEQI  RA  N      A QDA+R SF +L+N+R+VERCPA EPF+ P +   
Sbjct: 120  LQHGRLTLEQIYERARDN------AVQDAVRESFQKLLNSRFVERCPAPEPFVEPST--- 170

Query: 581  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 760
              S+ KRGAKSAKL E   T EQR   AA  L+  RFSI T +GT+   + K G      
Sbjct: 171  IKSSNKRGAKSAKLDEVSETEEQRVLAAAASLDTLRFSILTPSGTEFDEDKKDGDSSSSM 230

Query: 761  TVGEKRKHETLEMDSKVMATICEKEV-LWRANFEEFVRLLRIKACVTNVRSRLDDNAGIV 937
             VGEKRKH   + D    +   E EV LWRANFEEF R LR KAC+ NVR+RLD  A  V
Sbjct: 231  GVGEKRKHGAADSDDAFGSN--ENEVILWRANFEEFTRYLRHKACIENVRARLDVGAATV 288

Query: 938  LNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNAR 1117
            L AML+ATR  EKK KTE S  LSMD I EEVMKSE GRS+T++ VRA+L QLGC  ++ 
Sbjct: 289  LKAMLDATRSAEKKVKTENSVSLSMDTIFEEVMKSEAGRSLTLDRVRASLVQLGC--SSS 346

Query: 1118 GT-ESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQISDTAFVD 1294
            GT ++YS+D+K IIE+AQ EEVES VL+RYGRDAYRMFRLLSKAG L  TD+I+D  FV+
Sbjct: 347  GTDDTYSIDLKQIIELAQKEEVESIVLRRYGRDAYRMFRLLSKAGLLQETDKIADMTFVE 406

Query: 1295 KKEALKILYNLWKDDYLY-------------------------KEKIVLHGSTQVPLL-- 1393
            KKEA KIL  LWKD+YL+                         K ++ L G + + L+  
Sbjct: 407  KKEAPKILGKLWKDEYLHMEVEYFNLLIKFTLSSNMAICDVVDKPRLTLSGMSDLVLMDQ 466

Query: 1394 -----------------LWKVNKHSLRERILDEMYHAALNLSQRMVHELEQEHEILV--- 1513
                             LWKVNK  L + +LDEMYHAALNLS R++HEL+Q+ E+L    
Sbjct: 467  NKEIVNKFVVDRNTTFYLWKVNKPILWQHVLDEMYHAALNLSLRVIHELDQKKELLTIPP 526

Query: 1514 DKRVGAQGKRFDRIKKVKILLESSLMKLDDALMLFHDF 1627
            +KR G   K F R+K  K  LESSLMKLDDALMLF  F
Sbjct: 527  EKRTGPLEKEFKRLKNAKFFLESSLMKLDDALMLFRHF 564


>ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protein [Populus trichocarpa]
            gi|550322612|gb|EEF06047.2| RNA polymerase 3 subunit
            RPC82 family protein [Populus trichocarpa]
          Length = 520

 Score =  499 bits (1285), Expect = e-138
 Identities = 276/532 (51%), Positives = 371/532 (69%), Gaps = 3/532 (0%)
 Frame = +2

Query: 41   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 220
            MVSQ+GIK AV++I++HFG LV+KVC+CLL+KG L L EI RYTE+    V+N LLVLIQ
Sbjct: 1    MVSQYGIKYAVHIITNHFGPLVAKVCDCLLKKGPLPLREIVRYTELSETLVRNCLLVLIQ 60

Query: 221  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 400
            HNC+Q F +++EGGFG   +V + Y V+F+N+LHR+RFSKF+ IVS+   K CV+L+E L
Sbjct: 61   HNCLQPFLLEEEGGFGEVNKVSSLYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVDLIETL 120

Query: 401  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSEDE 580
            LQHGRL+ EQI       ++  +S   +AL+ +  +LV ARYVERCP +EPFLA PSE+E
Sbjct: 121  LQHGRLSSEQIF---DGFRDRSSSGGMEALQENMHKLVMARYVERCPISEPFLALPSEEE 177

Query: 581  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 760
                 +RGAKSAK   E  T+EQR   AA P E  RFS   +   ++ ++     +   +
Sbjct: 178  AAPVRRRGAKSAKAFLEPETLEQRVLVAAVPPEGMRFSF--ELNPEIGADRDKVENNSSS 235

Query: 761  TVGEKRKHETLEMDSKVMATICEKEV-LWRANFEEFVRLLRIKACVTNVRSRLDDNAGIV 937
             +G+KRK + LE D  +   + +K+V LWR NFEEF+R LR K C+  VR+RLDD A  V
Sbjct: 236  NIGDKRKLDALESD--IDGGVADKQVALWRVNFEEFIRRLRHKICIETVRTRLDDEAATV 293

Query: 938  LNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNAR 1117
              AML+A+R  EKK KT  S PLS ++I  EV+KSE+GR+MT+++V + L  L   P   
Sbjct: 294  FTAMLDASRSEEKKIKTASSVPLSENSIYAEVIKSEKGRNMTLDYVISVLVGLSSSPPFV 353

Query: 1118 GT--ESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQISDTAFV 1291
                 SYS+D K+ IE+AQ +  ES V K+YG+DAYRMFRLLSKAG L+ TD+ISD+ F+
Sbjct: 354  RVVDNSYSIDFKHTIEVAQTD--ESIVYKKYGKDAYRMFRLLSKAGCLLETDKISDSIFL 411

Query: 1292 DKKEALKILYNLWKDDYLYKEKIVLHGSTQVPLLLWKVNKHSLRERILDEMYHAALNLSQ 1471
            +KKE   IL  +W+ DYL  EK++  G TQ   LLWKVN  +LRER+LD+M+HAALNLS 
Sbjct: 412  EKKETANILSKMWQGDYLQMEKLIA-GPTQ--FLLWKVNMINLRERVLDDMFHAALNLSL 468

Query: 1472 RMVHELEQEHEILVDKRVGAQGKRFDRIKKVKILLESSLMKLDDALMLFHDF 1627
            R+ +ELEQ+ EIL     G   ++++++KKV+ LLESS MKLDDA+M+FHDF
Sbjct: 469  RVAYELEQQKEILHLGVDGPMKEKYEKLKKVRFLLESSRMKLDDAIMIFHDF 520


>ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phaseolus vulgaris]
            gi|561016615|gb|ESW15419.1| hypothetical protein
            PHAVU_007G071300g [Phaseolus vulgaris]
          Length = 517

 Score =  496 bits (1278), Expect = e-137
 Identities = 282/536 (52%), Positives = 364/536 (67%), Gaps = 7/536 (1%)
 Frame = +2

Query: 41   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 220
            MV+Q GIK AV+LI++HFG+LV+KVCE L   G+LTL ++ RY+E+   QVKN LLVL+Q
Sbjct: 1    MVTQFGIKFAVHLITNHFGNLVAKVCENLFSHGSLTLDQLVRYSELTKDQVKNSLLVLVQ 60

Query: 221  HNCVQAF--AIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLE 394
            HNC QAF  A + +     + RV TQY V+F+NI+HRLRF KFL  VS+ L +ECVELL+
Sbjct: 61   HNCCQAFISAPEDDDDDADRLRVRTQYLVLFDNIIHRLRFPKFLETVSRKLDEECVELLD 120

Query: 395  GLLQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSE 574
            GLL+ GRLTL+Q++ RA   K   N+     +R    +L+ AR VERCPA EP ++   +
Sbjct: 121  GLLRDGRLTLKQMVDRASQGKE--NAVDTKVVREILSKLLTARLVERCPAPEPVVSTSFK 178

Query: 575  DETPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPP 754
            + T    KRGAKSAK+ E   T+EQR   AA P  A RFS T D  ++V  E  S  D  
Sbjct: 179  ETTTR--KRGAKSAKIFEAPETLEQRVLEAAVPGNAIRFSFTADMRSNVDGETNSDDDQI 236

Query: 755  PTTVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGI 934
             T+V +         D+K      E+E+LWRANFEEF+R +R KA + N+R++ DD    
Sbjct: 237  -TSVEQN--------DAK------EEEILWRANFEEFIRHIRHKALIENIRTQHDDGTAT 281

Query: 935  VLNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNA 1114
            VL+A+LEAT+ VEKK K E S PLS+D I  EVMK++ GR+MT++ +RA+LSQLGC    
Sbjct: 282  VLSAVLEATKTVEKKVKMENSVPLSLDTITAEVMKTDTGRTMTIDRIRASLSQLGCSQRM 341

Query: 1115 RGTESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQISDTAFVD 1294
               ++YS+D+K IIE AQNEEVES VLKRYGRDAYRMFRLLSK      TDQI+ +  V+
Sbjct: 342  IVDDAYSIDLKKIIERAQNEEVESIVLKRYGRDAYRMFRLLSKDCCFHDTDQIAASTLVE 401

Query: 1295 KKEALKILYNLWKDDYLYKEKIVLHGSTQVPLLLWKVNKHSLRERILDEMYHAALNLSQR 1474
            KKEA K+LY LWKD+YLY EK++  G  Q  +L+WKVNK  + E +LDEMYHAALNLS R
Sbjct: 402  KKEAPKLLYRLWKDNYLYMEKVIATGVKQTTILMWKVNKPLVWEHVLDEMYHAALNLSLR 461

Query: 1475 MVHELEQEHEIL-----VDKRVGAQGKRFDRIKKVKILLESSLMKLDDALMLFHDF 1627
            M  E E++ E+L       K  G   K++ R+  V +LL SSLMKLD+ALMLFHDF
Sbjct: 462  MAFEQEKDEELLNVPKDKLKEPGPLQKKYKRLLNVWLLLGSSLMKLDEALMLFHDF 517


>ref|XP_006589539.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Glycine
            max]
          Length = 518

 Score =  490 bits (1262), Expect = e-136
 Identities = 280/537 (52%), Positives = 361/537 (67%), Gaps = 8/537 (1%)
 Frame = +2

Query: 41   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 220
            MV+QHGIK AV+LI+ HFG +V+KVCE L   G LTL ++ RYT++   QV+N LLVL+Q
Sbjct: 1    MVTQHGIKFAVHLITKHFGKIVAKVCENLFIHGPLTLDQLVRYTDLTKDQVRNSLLVLVQ 60

Query: 221  HNCVQAF--AIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLE 394
            HNCVQAF  A Q +     + RV TQY V+F++ILHRLRF KFL IVS+ L +ECV+LL+
Sbjct: 61   HNCVQAFVSAPQDDDDDADRLRVRTQYLVLFDSILHRLRFPKFLEIVSRKLDEECVKLLD 120

Query: 395  GLLQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSE 574
            GLL+ GRLTL+Q++ R    K   N+     +R +  +L+ AR+VERCPA EP ++   +
Sbjct: 121  GLLRDGRLTLKQMVDRESQRKE--NAVPTKVVRETLCKLLTARFVERCPAPEPVVSTSFK 178

Query: 575  DETPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPP 754
            + T    KRGAKSAK+ E   T+EQR   AA P +  RFS+  DT   V  E  S     
Sbjct: 179  ETTTR--KRGAKSAKIFEAPETLEQRVVDAAVPGDVIRFSLAADTRCSVDRETNS----- 231

Query: 755  PTTVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGI 934
                      +  +M S       E ++LWRANFEEF+R LR K  + NVR++ DD    
Sbjct: 232  ----------DDAQMISVEEEVAKEGQILWRANFEEFIRHLRHKVLIENVRTQHDDGTAT 281

Query: 935  VLNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNA 1114
            VL+A+LEATR V+KK KTE S PLS+D I+ EVMK++ GR+MTV+ +RA+L QLGC P+ 
Sbjct: 282  VLSAVLEATRSVQKKVKTENSVPLSLDTIITEVMKTDTGRTMTVDRIRASLVQLGCSPSM 341

Query: 1115 RGTESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQISDTAFVD 1294
               ESYS+D+K IIE A+NEEVES VLKRYG D YR+FRLL+K      TDQI+ +  V+
Sbjct: 342  ILEESYSIDLKKIIEPARNEEVESIVLKRYGTDGYRIFRLLAKDCCFHDTDQIAASTLVE 401

Query: 1295 KKEALKILYNLWKDDYLYKEKI-VLHGSTQVPLLLWKVNKHSLRERILDEMYHAALNLSQ 1471
            KKEA K+LY LWKD+YLY EK+    G+ Q  +L+WKVNK  L E +LDEMYHAALNLS 
Sbjct: 402  KKEASKLLYKLWKDNYLYMEKVGATVGAKQTTILMWKVNKPLLWEYVLDEMYHAALNLSL 461

Query: 1472 RMVHELEQEHEIL---VDKR--VGAQGKRFDRIKKVKILLESSLMKLDDALMLFHDF 1627
            RM  E E++ E+L    DKR   G   K++ ++  V +LL SSLMKLDDALMLFHDF
Sbjct: 462  RMAFEQEKDEELLKVPKDKRQGPGPLQKKYKKLLNVWLLLGSSLMKLDDALMLFHDF 518


>ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Glycine
            max]
          Length = 518

 Score =  488 bits (1257), Expect = e-135
 Identities = 276/537 (51%), Positives = 362/537 (67%), Gaps = 8/537 (1%)
 Frame = +2

Query: 41   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 220
            MV++HGIK  V+LI+ HFG +V+KVCE L   G LTL ++ RYT+    QV+N LLVL+Q
Sbjct: 1    MVTEHGIKFGVHLITKHFGKIVAKVCEKLFSHGPLTLDQLVRYTDFTKDQVRNSLLVLVQ 60

Query: 221  HNCVQAF--AIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLE 394
            HNC QAF  A Q +     + RV TQY V+F+NI+HRLRF KFL IVS+ L +ECV+LL 
Sbjct: 61   HNCAQAFVSAPQDDDDDADRLRVRTQYLVLFDNIIHRLRFPKFLDIVSRKLDEECVKLLV 120

Query: 395  GLLQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSE 574
            GLL+ GRLTL+Q++ R    K   N+     +R +  +L+ AR+VERCPA EP ++   +
Sbjct: 121  GLLRDGRLTLKQMVDRESQGKE--NAVPTKVVRETLCKLLTARFVERCPAPEPVVSTSFK 178

Query: 575  DETPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPP 754
            + T    KRGAKSAK+ E   T+EQR   AA P +  RFS+T + G++V  E  S  D P
Sbjct: 179  ETTTK--KRGAKSAKIFEAPETLEQRVVDAAVPGDVIRFSLTANMGSNVDRETNSD-DVP 235

Query: 755  PTTVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGI 934
              +V E                  E+++LWRANFEEF+R LR K  + NVR++ DD    
Sbjct: 236  MISVEED--------------VAKEEQILWRANFEEFIRHLRHKVLIENVRTQHDDGTAT 281

Query: 935  VLNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNA 1114
            VL+A+LEAT  VEKK K + S PLS+D I+ EVMK++ GR+MT++ +RA+L QLGC P+ 
Sbjct: 282  VLSAVLEATGSVEKKVKMDNSVPLSLDTIITEVMKTDTGRTMTIDRIRASLVQLGCSPSM 341

Query: 1115 RGTESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQISDTAFVD 1294
               ESY +D+K IIE A+NEEVES VLKRYGRDAYRMFRLL+K      TDQI+ +  V+
Sbjct: 342  ILEESYCIDLKKIIEPARNEEVESIVLKRYGRDAYRMFRLLAKDCCFHDTDQIAASTLVE 401

Query: 1295 KKEALKILYNLWKDDYLYKEKI-VLHGSTQVPLLLWKVNKHSLRERILDEMYHAALNLSQ 1471
            KKEA K+LY LWKD+YLY EK+    G+ Q+ +L+WKVNK  L E +LDEMYHAALNLS 
Sbjct: 402  KKEASKLLYKLWKDNYLYMEKVGATAGAKQITILMWKVNKPLLWEYVLDEMYHAALNLSL 461

Query: 1472 RMVHELEQEHEIL---VDK--RVGAQGKRFDRIKKVKILLESSLMKLDDALMLFHDF 1627
            RM  E E++ E+L    DK    G   K++ R+  V++L+ SSL+KLDDALMLFHDF
Sbjct: 462  RMAFEQEKDEELLKVPKDKLREPGPLQKKYKRLLNVRLLMGSSLLKLDDALMLFHDF 518


>ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prunus persica]
            gi|462415465|gb|EMJ20202.1| hypothetical protein
            PRUPE_ppa004195mg [Prunus persica]
          Length = 524

 Score =  488 bits (1255), Expect = e-135
 Identities = 278/540 (51%), Positives = 376/540 (69%), Gaps = 12/540 (2%)
 Frame = +2

Query: 44   VSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQH 223
            ++Q+GIK AV++I+S+FG+LV+KVCE LLR+G L+L ++  +TE+  QQVKN LL+LIQH
Sbjct: 3    LTQYGIKYAVHIITSNFGNLVAKVCEILLRRGHLSLKQLIGFTELTPQQVKNSLLILIQH 62

Query: 224  NCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLL 403
            NCVQ F+  Q  G    P+V TQY  +F+NI+HR RF+KFL +VS+ L  +   +L+ LL
Sbjct: 63   NCVQPFSFDQSEG----PKV-TQYIALFDNIIHRGRFAKFLAVVSQELDTDRELILKDLL 117

Query: 404  QHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSEDET 583
            ++GRLTL+QII  A S+K++G+SA +D+++ SF++LVNA +VERCPA EP L   ++ E 
Sbjct: 118  ENGRLTLKQIIEGAESSKSQGDSADKDSVQESFLKLVNAHFVERCPAPEPVLGQATKQEG 177

Query: 584  PSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTT 763
            P A KRGAKSAK++E   T+EQR   AA P EA RFSI  D+  D       GG     +
Sbjct: 178  P-AKKRGAKSAKMVEVPETIEQRVIAAAAPPEAIRFSIMIDSEADAP-----GGKSDNMS 231

Query: 764  VGEKRKHETLEMDSKVMATICE---KEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGI 934
            VGEK       +   ++ +I +   + VLWRANFEEF+R LR KACV NVR+RLDD A +
Sbjct: 232  VGEK-------VGIGIVISIYQGYDEVVLWRANFEEFIRCLRHKACVENVRARLDDEAAV 284

Query: 935  VLNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNA 1114
            VL AML+ATR  EKK KTE S PLS++ I EEV+ SE GRS+T+  VR +LS L      
Sbjct: 285  VLRAMLKATRTAEKKVKTENSVPLSLNTIYEEVINSEAGRSLTMGRVRDSLSGLCDSSQE 344

Query: 1115 RGT---ESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQISD-- 1279
            R     ESYS D+K I+E+AQ++EVE  VLKRYG+DAY MFR+LS AGR + TD+ISD  
Sbjct: 345  RDVDEDESYSADLKKILELAQDDEVELIVLKRYGKDAYTMFRILSLAGRPIETDKISDMS 404

Query: 1280 -TAFVDKKEALKILYNLWKDDYLYKEKIVLHGSTQVPLLLWKVNKHSLRERILDEMYHAA 1456
              + V+K E  KILYNLWKDDYL+ E++V+ G+ Q   L+W+V+K  + + +LDEM+H A
Sbjct: 405  QLSLVEKNETPKILYNLWKDDYLHMERLVVTGARQSQFLVWRVDKPIIWKHVLDEMFHTA 464

Query: 1457 LNLSQRMVHELEQEHEIL---VDKRVGAQGKRFDRIKKVKILLESSLMKLDDALMLFHDF 1627
            LNLS R+  E E+  EI      K +G   K++   + V ++L++SL+KLDDALMLFHDF
Sbjct: 465  LNLSLRLACEEERFKEITDLPAHKLLGEMAKQWQLYRNVILVLQASLLKLDDALMLFHDF 524


>ref|XP_002510780.1| DNA-directed RNA polymerase III 62 kDa polypeptide, putative [Ricinus
            communis] gi|223549895|gb|EEF51382.1| DNA-directed RNA
            polymerase III 62 kDa polypeptide, putative [Ricinus
            communis]
          Length = 485

 Score =  486 bits (1252), Expect = e-134
 Identities = 261/488 (53%), Positives = 349/488 (71%), Gaps = 2/488 (0%)
 Frame = +2

Query: 47   SQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHN 226
            +QHGIK A ++I++HFG+LV+KVC+CLLRKG LT+ ++  +TE+   QVKN LLVLIQHN
Sbjct: 4    TQHGIKYATHIITNHFGNLVAKVCQCLLRKGPLTVQKVVEFTELNQTQVKNSLLVLIQHN 63

Query: 227  CVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQ 406
            CVQA+        G   ++ T Y  +F+NILHR+RFSKFL I+S+   K CV+++EGLL+
Sbjct: 64   CVQAYRS------GDDLKLTTHYIALFDNILHRVRFSKFLAIISQDFHKSCVDIVEGLLE 117

Query: 407  HGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSEDETP 586
            HGRLT++QI+ RA    N  NS   D+++ +  +LVN RY+E CPA+EP LAPP+E+E  
Sbjct: 118  HGRLTVKQIVDRA----NSRNSIGLDSVKENLCKLVNGRYIEHCPASEPVLAPPTEEED- 172

Query: 587  SAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTV 766
             A KR AKSAK++ E  T+EQR    A P++A+RFS+  DT      E K   +      
Sbjct: 173  RAKKRSAKSAKIVIESETLEQRVLAVAVPMDAKRFSVDLDT------ELKDDAE------ 220

Query: 767  GEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNA 946
             ++ K     +  KV     ++ VLWRANFEEF+R LR KAC+ NVR RLDD A IVL+A
Sbjct: 221  NDQNKSSDKHVGDKVAE---DQVVLWRANFEEFIRRLRHKACIENVRGRLDDGAAIVLSA 277

Query: 947  MLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPN-ARGT 1123
            ML+A+R  EKK KT  S PLS+++I EEV+K+E GR+MT++H+ +AL QLG  P   +  
Sbjct: 278  MLDASRTEEKKVKTASSVPLSLNSIYEEVIKNENGRNMTIDHIESALGQLGSPPPFVKAV 337

Query: 1124 ES-YSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQISDTAFVDKK 1300
            E  Y++D K+IIE AQ++EVES VLKRYGRDAYR+FRLLSKA RL+ TD+ISDT FV+KK
Sbjct: 338  EDLYTIDFKHIIEAAQSDEVESIVLKRYGRDAYRIFRLLSKASRLLETDKISDTIFVEKK 397

Query: 1301 EALKILYNLWKDDYLYKEKIVLHGSTQVPLLLWKVNKHSLRERILDEMYHAALNLSQRMV 1480
            E  KILY +W+DDYL  EK+V   +T    LLWKVNKH+L +++LDEM+HA+LNLS R+ 
Sbjct: 398  ETTKILYKMWQDDYLLMEKLVAGTAT---FLLWKVNKHTLWKQVLDEMFHASLNLSIRVA 454

Query: 1481 HELEQEHE 1504
            +ELEQ+ E
Sbjct: 455  YELEQQKE 462


>ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
            sativus]
          Length = 518

 Score =  486 bits (1250), Expect = e-134
 Identities = 278/540 (51%), Positives = 361/540 (66%), Gaps = 11/540 (2%)
 Frame = +2

Query: 41   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 220
            +++Q+GIK AV+++++HFG+LV+KVCE LLRKG LTL  + R+TE+   QV N LL+LIQ
Sbjct: 2    VMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQ 61

Query: 221  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALG--KECVELLE 394
            HNCVQAF       FG  P+  T Y  +F NILHR+RFSKF+ I S+ LG  K C ELLE
Sbjct: 62   HNCVQAFT-----DFGDAPKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLE 116

Query: 395  GLLQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSE 574
            GLLQ+GRL++EQ++ RA S     N    D +  S  +L+NA +VERCPA EP L+P  E
Sbjct: 117  GLLQNGRLSMEQLVERAESR----NHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVE 172

Query: 575  DETPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPP 754
            +  P   KRGAK+AK+ E   T+EQR   AA P+E  RFS+      D   EA+      
Sbjct: 173  EPPPR--KRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMG-----DTNPEAEKSEHHS 225

Query: 755  PTTVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGI 934
              + G+KRKH+ LE+     +   +  +LWRAN++EF+R LR KAC+ +VRS+ DD    
Sbjct: 226  QIS-GQKRKHDDLEIAQD--SGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVN 282

Query: 935  VLNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNA 1114
            VL+A+LEATR  EK  KTE + PLS+D I EEVMK+E GRSMT++ V A+L+ LGC    
Sbjct: 283  VLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCP--- 339

Query: 1115 RGTESY------SVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQIS 1276
             G + Y      +VD   IIE AQ +EVES VLKRYGRDAYRMFR LSK G LV T++IS
Sbjct: 340  -GMDDYKISMFTTVDFSMIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKIS 398

Query: 1277 DTAFVDKKEALKILYNLWKDDYLYKEKIVLHGSTQVPLLLWKVNKHSLRERILDEMYHAA 1456
            D++FVDK EA KILY LWKD+YLY EK+ L        LLW+V++++L E +LDEMYHA+
Sbjct: 399  DSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHAS 458

Query: 1457 LNLSQRMVHELEQEHEIL---VDKRVGAQGKRFDRIKKVKILLESSLMKLDDALMLFHDF 1627
            LNL  R+ HE+E+  E+L    D       K+    + V+ LL SSL+KLDDALMLFHDF
Sbjct: 459  LNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFENVRNLLRSSLVKLDDALMLFHDF 518


>ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
            [Fragaria vesca subsp. vesca]
          Length = 534

 Score =  483 bits (1243), Expect = e-133
 Identities = 275/543 (50%), Positives = 360/543 (66%), Gaps = 15/543 (2%)
 Frame = +2

Query: 44   VSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQH 223
            V+  GI+ AV +I+ HFG+LV+KVCE LL+ G L L  + R T +  QQVKN LL+L+QH
Sbjct: 3    VTNSGIQYAVQIITKHFGNLVAKVCETLLKSGPLNLGALIRSTALTPQQVKNSLLILVQH 62

Query: 224  NCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLL 403
            NCVQ F  + + G  VQ      Y  V++NILHRLRF+KFL +V++ LG EC +L+ GLL
Sbjct: 63   NCVQPFTQESKAGLKVQ------YIAVYDNILHRLRFAKFLAVVAQELGDECKQLVAGLL 116

Query: 404  QHGRLTLEQIILRAISNKNEGNSAFQD--ALRTSFVQLVNARYVERCPAAEPFLAPPSED 577
            +HGRLT +Q++ RA       ++  QD  A + +FV+LVNAR+VERCPA EP L  P E 
Sbjct: 117  EHGRLTQQQLMDRADQKSKSDSTEVQDVSAAQENFVRLVNARFVERCPAPEPLLEEPPEQ 176

Query: 578  ETPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPP 757
            E P   K   KSAK+++   T+EQR   AA P+EA RF ITT++ TD   + KS  +   
Sbjct: 177  EGPK--KPRGKSAKMVQVPETIEQRVLAAARPMEAIRFLITTESETDDPLQ-KSENNFSS 233

Query: 758  TTVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIV 937
              VGEKRK +  ++DS+   +  +  +LWRANFE+F+R LR KAC+ +VR+R DD A +V
Sbjct: 234  MGVGEKRKFD--DLDSEEHGSNDKGVILWRANFEQFIRCLRHKACIESVRARHDDGAAVV 291

Query: 938  LNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNAR 1117
            L A+L+ATR  E K KT+YS PL MDAI EEVM SE   S+  E VRA L  L   P   
Sbjct: 292  LRAVLKATRNQETKVKTDYSGPLKMDAIYEEVMDSEACPSLEQECVRAHLRLLCGAPLVT 351

Query: 1118 GTES-------YSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLL---SKAGRLVLTD 1267
            G          YSVD+K IIE+ QN+EVES VLKRYG+DAYR+FRLL   S AGR   TD
Sbjct: 352  GEYEDENEDVLYSVDLKKIIELLQNDEVESIVLKRYGKDAYRIFRLLTSQSNAGRFFETD 411

Query: 1268 QISDTAFVDKKEALKILYNLWKDDYLYKEKIVLHGSTQVPLLLWKVNKHSLRERILDEMY 1447
            +IS+ A VDKKE  KILY LWKDDY++ EK+ L  + Q  +++WKV+K  + E +LDEMY
Sbjct: 412  KISEMALVDKKETPKILYKLWKDDYVHMEKLSLTAAKQSQVMVWKVHKSIVWEHVLDEMY 471

Query: 1448 HAALNLSQRMVHELEQEHEIL---VDKRVGAQGKRFDRIKKVKILLESSLMKLDDALMLF 1618
            HAA NL +R  HE E+  E+     +KR+G   K+ +R   V+ ++ SSL+KLDDALMLF
Sbjct: 472  HAAYNLVKRYDHEREENKEVTNTPKEKRIGELEKKANRFLAVRKIMASSLLKLDDALMLF 531

Query: 1619 HDF 1627
            HDF
Sbjct: 532  HDF 534


>ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
            sativus]
          Length = 518

 Score =  483 bits (1242), Expect = e-133
 Identities = 277/540 (51%), Positives = 360/540 (66%), Gaps = 11/540 (2%)
 Frame = +2

Query: 41   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 220
            +++Q+GIK AV+++++HFG+LV+KVCE LLRKG LTL  + R+TE+   QV N LL+LIQ
Sbjct: 2    VMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQ 61

Query: 221  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALG--KECVELLE 394
            HNCVQAF       FG   +  T Y  +F NILHR+RFSKF+ I S+ LG  K C ELLE
Sbjct: 62   HNCVQAFT-----DFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLE 116

Query: 395  GLLQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSE 574
            GLLQ+GRL++EQ++ RA S     N    D +  S  +L+NA +VERCPA EP L+P  E
Sbjct: 117  GLLQNGRLSMEQLVERAESR----NHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVE 172

Query: 575  DETPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPP 754
            +  P   KRGAK+AK+ E   T+EQR   AA P+E  RFS+      D   EA+      
Sbjct: 173  EPPPR--KRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMG-----DTNPEAEKSEHHS 225

Query: 755  PTTVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGI 934
              + G+KRKH+ LE+     +   +  +LWRAN++EF+R LR KAC+ +VRS+ DD    
Sbjct: 226  QIS-GQKRKHDDLEIAQD--SGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVN 282

Query: 935  VLNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNA 1114
            VL+A+LEATR  EK  KTE + PLS+D I EEVMK+E GRSMT++ V A+L+ LGC    
Sbjct: 283  VLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCP--- 339

Query: 1115 RGTESY------SVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQIS 1276
             G + Y      +VD   IIE AQ +EVES VLKRYGRDAYRMFR LSK G LV T++IS
Sbjct: 340  -GIDDYKISMFTTVDFSMIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKIS 398

Query: 1277 DTAFVDKKEALKILYNLWKDDYLYKEKIVLHGSTQVPLLLWKVNKHSLRERILDEMYHAA 1456
            D++FVDK EA KILY LWKD+YLY EK+ L        LLW+V++++L E +LDEMYHA+
Sbjct: 399  DSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHAS 458

Query: 1457 LNLSQRMVHELEQEHEIL---VDKRVGAQGKRFDRIKKVKILLESSLMKLDDALMLFHDF 1627
            LNL  R+ HE+E+  E+L    D       K+    + V+ LL SSL+KLDDALMLFHDF
Sbjct: 459  LNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFENVRNLLRSSLVKLDDALMLFHDF 518


>ref|XP_006490401.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X3 [Citrus sinensis]
          Length = 444

 Score =  473 bits (1218), Expect = e-130
 Identities = 251/439 (57%), Positives = 327/439 (74%), Gaps = 1/439 (0%)
 Frame = +2

Query: 41   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 220
            M++++G K AV++I++HFG LV+KVCECLLRKG LT   + RYTE+  +QVKN LLVLIQ
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 221  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 400
             NCVQAF  +Q  GF   P+  TQY V+F+NILHR+RF+KFL I+S+   ++CVEL++GL
Sbjct: 61   QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 401  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSEDE 580
            L+HGRLTL+Q+  RA S++ EGN    D+LR + V+LV A YVERCPA+EP L P SE+E
Sbjct: 121  LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 180

Query: 581  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 760
             P A K+G+KSAK I E  T+EQ+   AA P+EA RFS+ T+  +DV  + K+  +  P 
Sbjct: 181  GP-ARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP- 238

Query: 761  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 940
              GEKRKH+ LE+D   +A   E+ V++RANFE F+R LR K C+ +VR+ LDD A  VL
Sbjct: 239  --GEKRKHDVLELDECGVAD--EQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVL 294

Query: 941  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLG-CHPNAR 1117
            +AML+AT   EKK KT+ S PLS+ +I EEV+KSE GR+MT++HVRA+L QLG       
Sbjct: 295  SAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLGELSFVDA 354

Query: 1118 GTESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQISDTAFVDK 1297
             ++SYS+D + IIE+AQNEEVES V KRYGRDAYR+FRLLSK+GRL+ TD+ISDT FV+K
Sbjct: 355  SSDSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEK 414

Query: 1298 KEALKILYNLWKDDYLYKE 1354
            K+A KILY LWKD YL  E
Sbjct: 415  KDAPKILYKLWKDGYLLME 433


>ref|XP_006421932.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
            gi|557523805|gb|ESR35172.1| hypothetical protein
            CICLE_v10004721mg [Citrus clementina]
          Length = 433

 Score =  473 bits (1218), Expect = e-130
 Identities = 251/439 (57%), Positives = 327/439 (74%), Gaps = 1/439 (0%)
 Frame = +2

Query: 41   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 220
            M++++G K AV++I++HFG LV+KVCECLLRKG LT   + RYTE+  +QVKN LLVLIQ
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 221  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 400
             NCVQAF  +Q  GF   P+  TQY V+F+NILHR+RF+KFL I+S+   ++CVEL++GL
Sbjct: 61   QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 401  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVQLVNARYVERCPAAEPFLAPPSEDE 580
            L+HGRLTL+Q+  RA S++ EGN    D+LR + V+LV A YVERCPA+EP L P SE+E
Sbjct: 121  LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 180

Query: 581  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 760
             P A K+G+KSAK I E  T+EQ+   AA P+EA RFS+ T+  +DV  + K+  +  P 
Sbjct: 181  GP-ARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP- 238

Query: 761  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 940
              GEKRKH+ LE+D   +A   E+ V++RANFE F+R LR K C+ +VR+ LDD A  VL
Sbjct: 239  --GEKRKHDVLELDECGVAD--EQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVL 294

Query: 941  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLG-CHPNAR 1117
            +AML+AT   EKK KT+ S PLS+ +I EEV+KSE GR+MT++HVRA+L QLG       
Sbjct: 295  SAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLGELSFVDA 354

Query: 1118 GTESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQISDTAFVDK 1297
             ++SYS+D + IIE+AQNEEVES V KRYGRDAYR+FRLLSK+GRL+ TD+ISDT FV+K
Sbjct: 355  SSDSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEK 414

Query: 1298 KEALKILYNLWKDDYLYKE 1354
            K+A KILY LWKD YL  E
Sbjct: 415  KDAPKILYKLWKDGYLLME 433