BLASTX nr result

ID: Akebia25_contig00000628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00000628
         (228 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007023447.1| Cyclic nucleotide gated channel 8 [Theobroma...    57   1e-07
ref|XP_002264161.1| PREDICTED: putative cyclic nucleotide-gated ...    56   5e-07
emb|CBI25178.3| unnamed protein product [Vitis vinifera]               56   5e-07
ref|XP_004147453.1| PREDICTED: putative cyclic nucleotide-gated ...    55   1e-06
ref|XP_002512726.1| Cyclic nucleotide-gated ion channel, putativ...    55   2e-06
ref|XP_006830662.1| hypothetical protein AMTR_s00210p00019190 [A...    55   2e-06

>ref|XP_007023447.1| Cyclic nucleotide gated channel 8 [Theobroma cacao]
           gi|508778813|gb|EOY26069.1| Cyclic nucleotide gated
           channel 8 [Theobroma cacao]
          Length = 752

 Score = 57.0 bits (136), Expect(2) = 1e-07
 Identities = 27/58 (46%), Positives = 34/58 (58%)
 Frame = -2

Query: 227 WYMLASHVGTKVSGT*LDCLSFLVLLAVECNNACWQKDCITSEKCDTSYLYCANCHME 54
           WYMLASH+            +F  LLAVE N+ CW+  CI S KC+  +LYC N HM+
Sbjct: 280 WYMLASHIVG----------AFWYLLAVERNDTCWRNACIGSGKCNIDFLYCGNKHMQ 327



 Score = 24.6 bits (52), Expect(2) = 1e-07
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 54  GYATWHSISEVVFNKECS 1
           GYA W  +SE +   +CS
Sbjct: 328 GYADWRMVSENILGSKCS 345


>ref|XP_002264161.1| PREDICTED: putative cyclic nucleotide-gated ion channel 8-like
           [Vitis vinifera]
          Length = 743

 Score = 56.2 bits (134), Expect(2) = 5e-07
 Identities = 26/58 (44%), Positives = 34/58 (58%)
 Frame = -2

Query: 227 WYMLASHVGTKVSGT*LDCLSFLVLLAVECNNACWQKDCITSEKCDTSYLYCANCHME 54
           WYMLASH+            +F  L AVE  +ACW K C+ S KC+ ++LYC N HM+
Sbjct: 278 WYMLASHI----------LGAFWYLFAVERYDACWHKACVESGKCEVNFLYCGNQHMK 325



 Score = 23.1 bits (48), Expect(2) = 5e-07
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 54  GYATWHSISEVVFNKECS 1
           GY  W +IS+ V    CS
Sbjct: 326 GYGAWQNISKTVIGMMCS 343


>emb|CBI25178.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score = 56.2 bits (134), Expect(2) = 5e-07
 Identities = 26/58 (44%), Positives = 34/58 (58%)
 Frame = -2

Query: 227 WYMLASHVGTKVSGT*LDCLSFLVLLAVECNNACWQKDCITSEKCDTSYLYCANCHME 54
           WYMLASH+            +F  L AVE  +ACW K C+ S KC+ ++LYC N HM+
Sbjct: 278 WYMLASHI----------LGAFWYLFAVERYDACWHKACVESGKCEVNFLYCGNQHMK 325



 Score = 23.1 bits (48), Expect(2) = 5e-07
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 54  GYATWHSISEVVFNKECS 1
           GY  W +IS+ V    CS
Sbjct: 326 GYGAWQNISKTVIGMMCS 343


>ref|XP_004147453.1| PREDICTED: putative cyclic nucleotide-gated ion channel 8-like
           [Cucumis sativus] gi|449528215|ref|XP_004171101.1|
           PREDICTED: putative cyclic nucleotide-gated ion channel
           8-like [Cucumis sativus]
          Length = 731

 Score = 55.5 bits (132), Expect(2) = 1e-06
 Identities = 27/56 (48%), Positives = 35/56 (62%)
 Frame = -2

Query: 224 YMLASHVGTKVSGT*LDCLSFLVLLAVECNNACWQKDCITSEKCDTSYLYCANCHM 57
           YMLASH+            +F  LLAVE N+ACW++ C +S KC+ +YLYC N HM
Sbjct: 285 YMLASHIAG----------AFWYLLAVERNDACWRQACKSSGKCNINYLYCGNKHM 330



 Score = 22.7 bits (47), Expect(2) = 1e-06
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 54  GYATWHSISEVVFNKECS 1
           GY  W +IS  V  K+C+
Sbjct: 332 GYKAWRNISVDVLTKKCT 349


>ref|XP_002512726.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223547737|gb|EEF49229.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 1005

 Score = 54.7 bits (130), Expect(2) = 2e-06
 Identities = 29/54 (53%), Positives = 33/54 (61%)
 Frame = -2

Query: 227 WYMLASHVGTKVSGT*LDCLSFLVLLAVECNNACWQKDCITSEKCDTSYLYCAN 66
           WYMLASHV    SG      +F  LLAVE  + CWQK CI S +C  S+LYC N
Sbjct: 281 WYMLASHV----SG------AFWYLLAVERKDTCWQKACIQSGRCVISFLYCGN 324



 Score = 22.3 bits (46), Expect(2) = 2e-06
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 54  GYATWHSISEVVFNKECS 1
           G+  W  ISE V +K C+
Sbjct: 329 GFHEWRRISEGVLSKNCN 346


>ref|XP_006830662.1| hypothetical protein AMTR_s00210p00019190 [Amborella trichopoda]
           gi|548837252|gb|ERM98078.1| hypothetical protein
           AMTR_s00210p00019190 [Amborella trichopoda]
          Length = 772

 Score = 55.1 bits (131), Expect(2) = 2e-06
 Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
 Frame = -2

Query: 227 WYMLASH-VGTKVSGT*LDCLSFLVLLAVECNNACWQKDCITSEKCDTSYLYCANCHME 54
           WYMLASH VG           +F  LLAVE  +ACW+  C TS+ C+ SYLYC N ++E
Sbjct: 307 WYMLASHMVG-----------AFWYLLAVEREDACWRFACSTSDSCNKSYLYCGNQNLE 354



 Score = 21.9 bits (45), Expect(2) = 2e-06
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 54  GYATWHSISEVVFNKECS 1
           G+  W SIS+ V + +CS
Sbjct: 355 GFQRWSSISKGVLDGQCS 372


Top