BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00045076
         (592 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containi...   286   2e-75
ref|XP_007155307.1| hypothetical protein PHAVU_003G189800g [Phas...   281   1e-73
ref|XP_004301147.1| PREDICTED: pentatricopeptide repeat-containi...   280   2e-73
gb|EXB44694.1| hypothetical protein L484_015951 [Morus notabilis]     280   2e-73
ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containi...   276   2e-72
ref|XP_004508732.1| PREDICTED: pentatricopeptide repeat-containi...   276   4e-72
ref|XP_006477459.1| PREDICTED: pentatricopeptide repeat-containi...   275   7e-72
ref|XP_007037367.1| Pentatricopeptide repeat superfamily protein...   275   7e-72
ref|XP_007037366.1| Pentatricopeptide repeat superfamily protein...   275   7e-72
ref|XP_004235997.1| PREDICTED: pentatricopeptide repeat-containi...   275   9e-72
ref|XP_007210264.1| hypothetical protein PRUPE_ppa003212mg [Prun...   274   1e-71
ref|XP_006364594.1| PREDICTED: pentatricopeptide repeat-containi...   273   2e-71
ref|XP_006440604.1| hypothetical protein CICLE_v10018999mg [Citr...   271   1e-70
ref|XP_002304264.2| hypothetical protein POPTR_0003s07210g [Popu...   270   2e-70
ref|XP_002514751.1| pentatricopeptide repeat-containing protein,...   270   2e-70
ref|XP_006659434.1| PREDICTED: pentatricopeptide repeat-containi...   263   4e-68
ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group] g...   262   5e-68
ref|NP_190337.1| pentatricopeptide repeat-containing protein [Ar...   260   2e-67
ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containi...   258   7e-67
ref|XP_002877566.1| pentatricopeptide repeat-containing protein ...   258   9e-67

>ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Glycine max]
          Length = 579

 Score =  286 bits (733), Expect = 2e-75
 Identities = 137/197 (69%), Positives = 161/197 (81%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +H  I +DGHQ D LLLT +M  Y+ C  G DA +VFDEMP RDTV WNV+IS    N +
Sbjct: 126 VHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCIRNNR 185

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           +RDALSLFDVMQ   Y  +PDDVTCLLLLQACAHL AL+FGER+H YI E GY +ALNL 
Sbjct: 186 TRDALSLFDVMQGSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDALNLC 245

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           NSLI+MYSRCGCLDKA++VF+G  +KNVV+WSAMISGLAMNG+GR+AI+AF EM R+GV 
Sbjct: 246 NSLISMYSRCGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVL 305

Query: 541 PDDQTFTGVLSACSHNG 591
           PDDQTFTGVLSACS++G
Sbjct: 306 PDDQTFTGVLSACSYSG 322



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           IH  I++ G++    L  +L+  Y+ C     A +VF  M  ++ V+W+ +IS  A N  
Sbjct: 229 IHGYIMERGYRDALNLCNSLISMYSRCGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGY 288

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFG-ERVHNYIDENGYGEALNL 357
            R+A+  F+ M     G  PDD T   +L AC++ G +D G    H    E G    ++ 
Sbjct: 289 GREAIEAFEEMLR--IGVLPDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFGVTPNVHH 346

Query: 358 RNSLIAMYSRCGCLDKAFQVFQGTSDK-NVVTWSAMISGLAMNGH---GRDAIKAFIEMR 525
              ++ +  R G LDKA+Q+      K +   W  ++    ++GH   G   I   IE++
Sbjct: 347 YGCMVDLLGRAGLLDKAYQLIMSMVVKPDSTMWRTLLGACRIHGHVTLGERVIGHLIELK 406


>ref|XP_007155307.1| hypothetical protein PHAVU_003G189800g [Phaseolus vulgaris]
           gi|561028661|gb|ESW27301.1| hypothetical protein
           PHAVU_003G189800g [Phaseolus vulgaris]
          Length = 579

 Score =  281 bits (718), Expect = 1e-73
 Identities = 134/197 (68%), Positives = 159/197 (80%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +H  IL+DGHQ D LLLT +M  Y+ C  G DA +VFDEMPQRDTV WNV+IS    N +
Sbjct: 126 VHCNILKDGHQWDTLLLTVVMDLYSQCQRGGDACKVFDEMPQRDTVAWNVMISCCVRNNR 185

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           +RDALSLFD MQ      +PDDVTCLLLLQACAHL AL+FGER+H YI E GYG ALNL 
Sbjct: 186 TRDALSLFDDMQRSNDKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYGVALNLS 245

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           N+LI+MYSRCGCLDKA+++F+ T +K VV+WSAMISGLAMNG+GR+AI+ F EM R+G+ 
Sbjct: 246 NALISMYSRCGCLDKAYEMFKRTGNKCVVSWSAMISGLAMNGYGREAIETFEEMLRIGIQ 305

Query: 541 PDDQTFTGVLSACSHNG 591
           PDDQTFTGVLSACSH+G
Sbjct: 306 PDDQTFTGVLSACSHSG 322



 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 6/181 (3%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           IH  I++ G+     L   L+  Y+ C     A ++F     +  V+W+ +IS  A N  
Sbjct: 229 IHGYIMERGYGVALNLSNALISMYSRCGCLDKAYEMFKRTGNKCVVSWSAMISGLAMNGY 288

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
            R+A+  F+ M     G +PDD T   +L AC+H G +D G  V + ++   +G   N+R
Sbjct: 289 GREAIETFEEMLR--IGIQPDDQTFTGVLSACSHSGMVDEGMSVFDRMNRE-FGITPNVR 345

Query: 361 N--SLIAMYSRCGCLDKAFQVFQGTSDK-NVVTWSAMISGLAMNGH---GRDAIKAFIEM 522
           +   ++ +  R G LDKA+Q+      K +   W  ++    ++GH   G   I   IE+
Sbjct: 346 HYGCMVDLLGRVGLLDKAYQLIMSMVVKPDSTIWRTLLGACRIHGHVTLGEQVIGHLIEL 405

Query: 523 R 525
           +
Sbjct: 406 K 406



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
 Frame = +1

Query: 142 WNVLISFYANNRQSRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNY 321
           +N +I   + +   R  L L+  M+    G   D V+    +++C  L     G +VH  
Sbjct: 72  YNTMIRACSMSDSPRKGLLLYRDMRRR--GIAADPVSASFAVKSCIRLLYFLGGVQVHCN 129

Query: 322 IDENGYGEALNLRNSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDA 501
           I ++G+     L   ++ +YS+C     A +VF     ++ V W+ MIS    N   RDA
Sbjct: 130 ILKDGHQWDTLLLTVVMDLYSQCQRGGDACKVFDEMPQRDTVAWNVMISCCVRNNRTRDA 189

Query: 502 IKAFIEMRRMG--VYPDDQTFTGVLSACSH 585
           +  F +M+R      PDD T   +L AC+H
Sbjct: 190 LSLFDDMQRSNDKCEPDDVTCLLLLQACAH 219


>ref|XP_004301147.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Fragaria vesca subsp. vesca]
          Length = 643

 Score =  280 bits (717), Expect = 2e-73
 Identities = 132/197 (67%), Positives = 161/197 (81%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +  RI++DGH SD  LLT LM  Y+ C    DA +VFDE+PQRDTV WNVLIS + +N  
Sbjct: 190 VQTRIVRDGHHSDSRLLTALMNLYSTCGEYHDACKVFDEIPQRDTVAWNVLISCFLHNSH 249

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           SRDAL +FDVM++  YG +PDDVTCLL LQACA++ AL+FGERVH YI+E+GYG A NL 
Sbjct: 250 SRDALGVFDVMRSGSYGCEPDDVTCLLTLQACANMNALEFGERVHRYIEEHGYGGASNLC 309

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           N+LI MYSRCGCLDKA++VF+G   +NVV+WSAMISGLA+NG+GRDA++AF EM+RMGV 
Sbjct: 310 NALITMYSRCGCLDKAYEVFKGMRGRNVVSWSAMISGLAVNGYGRDAVEAFCEMQRMGVL 369

Query: 541 PDDQTFTGVLSACSHNG 591
           PD+QTFTGVLSACSH G
Sbjct: 370 PDEQTFTGVLSACSHCG 386



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 5/200 (2%)
 Frame = +1

Query: 1   IHARILQDG---HQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYAN 171
           IHA ILQ       S C    +L+       N + +R    ++P+ + + +N LI  Y+ 
Sbjct: 86  IHAHILQTSLILDSSICFHFLSLLSLSPPLKNLTYSRHFLAQIPKPNAIHYNTLIRAYST 145

Query: 172 NRQSRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEAL 351
           +      + L+   +    G   + ++   ++Q C  +  L  G +V   I  +G+    
Sbjct: 146 SDSPEQGIHLYRDFRRR--GLHCNSLSSFFVIQCCVKMQCLSVGIQVQTRIVRDGHHSDS 203

Query: 352 NLRNSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMR-- 525
            L  +L+ +YS CG    A +VF     ++ V W+ +IS    N H RDA+  F  MR  
Sbjct: 204 RLLTALMNLYSTCGEYHDACKVFDEIPQRDTVAWNVLISCFLHNSHSRDALGVFDVMRSG 263

Query: 526 RMGVYPDDQTFTGVLSACSH 585
             G  PDD T    L AC++
Sbjct: 264 SYGCEPDDVTCLLTLQACAN 283


>gb|EXB44694.1| hypothetical protein L484_015951 [Morus notabilis]
          Length = 640

 Score =  280 bits (716), Expect = 2e-73
 Identities = 132/197 (67%), Positives = 163/197 (82%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +H RIL+DG+ SDC LLTTLM  Y+ C+   DA +VFDEMP+RDTV WNVLIS    N++
Sbjct: 187 VHGRILRDGNLSDCRLLTTLMELYSGCERFGDALKVFDEMPKRDTVAWNVLISCCLRNKR 246

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           +RDALSLFD MQ+  YG +PD+V+CLL+LQACA+L AL+FGER+  YIDE+GYG   NLR
Sbjct: 247 TRDALSLFDAMQSEEYGCEPDEVSCLLVLQACANLNALEFGERIRRYIDEHGYGGHTNLR 306

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           NSL++MYSRCG LDKA++VF+G  DKNVV+WSAMISGLA+NG+GR+AI AF EM++ GV 
Sbjct: 307 NSLVSMYSRCGSLDKAYEVFRGLQDKNVVSWSAMISGLAINGYGREAINAFEEMQKTGVK 366

Query: 541 PDDQTFTGVLSACSHNG 591
           PD QTFTG+LSACSH G
Sbjct: 367 PDAQTFTGILSACSHCG 383



 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 6/181 (3%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           I   I + G+     L  +L+  Y+ C +   A +VF  +  ++ V+W+ +IS  A N  
Sbjct: 290 IRRYIDEHGYGGHTNLRNSLVSMYSRCGSLDKAYEVFRGLQDKNVVSWSAMISGLAINGY 349

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
            R+A++ F+ MQ    G KPD  T   +L AC+H G +D G      + + G+G + N+ 
Sbjct: 350 GREAINAFEEMQKT--GVKPDAQTFTGILSACSHCGLVDEGMMFFGRMSK-GFGISPNIH 406

Query: 361 N--SLIAMYSRCGCLDKAFQVFQGTSDK-NVVTWSAMISGLAMNGH---GRDAIKAFIEM 522
           +   ++ +  R G LD+A+++      K +   W  ++    ++GH   G   I   IE+
Sbjct: 407 HYGCMVDLLGRAGLLDRAYRLIMSMDVKPDPEIWRTLLGACRIHGHVNLGERVIGHLIEL 466

Query: 523 R 525
           +
Sbjct: 467 K 467


>ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
           [Vitis vinifera]
          Length = 643

 Score =  276 bits (707), Expect = 2e-72
 Identities = 134/197 (68%), Positives = 166/197 (84%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           IHARIL+DGHQSD LLLTTLM  Y+ CD   +A +VFDE+PQ DTV+WNVLIS   +NR+
Sbjct: 190 IHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRR 249

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           +RDAL +FD+MQ+   G +PDDVTCLLLLQACA+LGAL+FGERVHNYI+E+GY  ALNL 
Sbjct: 250 TRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALNLC 309

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           NSLI MYSRCG L+KA+ +F+   ++NVV+WSAMISG AM+G+GR+AI+AF +M+++GV 
Sbjct: 310 NSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVS 369

Query: 541 PDDQTFTGVLSACSHNG 591
           PDDQT TGVLSACSH G
Sbjct: 370 PDDQTLTGVLSACSHCG 386



 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +H  I + G+     L  +L+  Y+ C     A  +F  M +R+ V+W+ +IS +A +  
Sbjct: 293 VHNYIEEHGYDGALNLCNSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGY 352

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDE-NGYGEALNL 357
            R+A+  F+ MQ    G  PDD T   +L AC+H G +D G    + + +  G    ++ 
Sbjct: 353 GREAIEAFEQMQQ--LGVSPDDQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHH 410

Query: 358 RNSLIAMYSRCGCLDKAFQVFQGTSDK-NVVTWSAMISGLAMNGH---GRDAIKAFIEMR 525
              ++ +  R G LD+A+Q+      K +   W  ++    ++ H   G   I   IE++
Sbjct: 411 YGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELK 470



 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
 Frame = +1

Query: 103 QVFDEMPQRDTVTWNVLISFYANNRQSRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAH 282
           QVF ++ +     +NV+I  Y+ +        L+  M+    G  P+ ++   ++++C  
Sbjct: 123 QVFSQIMKPSGSQYNVMIRAYSMSHSPEQGFYLYREMRRR--GVPPNPLSSSFVMKSCIR 180

Query: 283 LGALDFGERVHNYIDENGYGEALNLRNSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAM 462
           + +L  G ++H  I  +G+     L  +L+ +YS C   ++A +VF      + V+W+ +
Sbjct: 181 ISSLMGGLQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVL 240

Query: 463 ISGLAMNGHGRDAIKAFIEMRRM--GVYPDDQTFTGVLSACSHNG 591
           IS    N   RDA++ F  M+    G  PDD T   +L AC++ G
Sbjct: 241 ISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLG 285


>ref|XP_004508732.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Cicer arietinum]
          Length = 633

 Score =  276 bits (705), Expect = 4e-72
 Identities = 127/196 (64%), Positives = 158/196 (80%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +H  +L++GHQSD LLLT+LM  Y+ C    DA +VFDE+PQ+DTV WNV+IS    N +
Sbjct: 180 VHCNVLKEGHQSDTLLLTSLMDLYSQCQRCDDASKVFDEIPQKDTVAWNVMISCCIRNNR 239

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           +RDALSLFDVMQ   Y  +PD+VTCLLLLQACA L AL+FGER+H+YI E GYG  LNL 
Sbjct: 240 TRDALSLFDVMQTESYQCEPDNVTCLLLLQACARLNALEFGERIHSYITERGYGGVLNLS 299

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           NSLI+MYSRCGCLDKA++VF G  +K V++WSAMISGLA+NG+GR+AI+AF EM+R G+ 
Sbjct: 300 NSLISMYSRCGCLDKAYEVFMGMENKTVISWSAMISGLAVNGYGREAIEAFEEMQRNGIR 359

Query: 541 PDDQTFTGVLSACSHN 588
           PDD TFTG+LS CSH+
Sbjct: 360 PDDHTFTGILSGCSHS 375



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 5/180 (2%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           IH+ I + G+     L  +L+  Y+ C     A +VF  M  +  ++W+ +IS  A N  
Sbjct: 283 IHSYITERGYGGVLNLSNSLISMYSRCGCLDKAYEVFMGMENKTVISWSAMISGLAVNGY 342

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHN-YIDENGYGEALNL 357
            R+A+  F+ MQ    G +PDD T   +L  C+H   LD G    +  I E     A++ 
Sbjct: 343 GREAIEAFEEMQRN--GIRPDDHTFTGILSGCSHSRLLDEGMSFFDRMISEFRITPAIHH 400

Query: 358 RNSLIAMYSRCGCLDKAFQVFQGTSDK-NVVTWSAMISGLAMNGH---GRDAIKAFIEMR 525
              ++ ++ R G LDKA+Q+      K +   W  ++    ++G    G   I   IE++
Sbjct: 401 YGCMVDLFGRAGLLDKAYQLITSMEVKPDSTVWRTLLGACRIHGDVALGERVIGHLIELK 460



 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
 Frame = +1

Query: 1   IHARILQDG---HQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYAN 171
           IHA IL      H +  L   + +       + + + + FD++       +N +I  Y+ 
Sbjct: 76  IHAHILTTTLIQHPTISLHFLSRLALSGPLQDPTYSHRFFDQISNPFVFHYNTMIRAYSL 135

Query: 172 NRQSRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEAL 351
           +   + AL L+  M+    G   D ++    +++C     L  G +VH  + + G+    
Sbjct: 136 SDSPQKALFLYRDMRRK--GIASDPLSSSFAVKSCIRFLYLFGGLQVHCNVLKEGHQSDT 193

Query: 352 NLRNSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRM 531
            L  SL+ +YS+C   D A +VF     K+ V W+ MIS    N   RDA+  F  M+  
Sbjct: 194 LLLTSLMDLYSQCQRCDDASKVFDEIPQKDTVAWNVMISCCIRNNRTRDALSLFDVMQTE 253

Query: 532 GVY--PDDQTFTGVLSACS 582
                PD+ T   +L AC+
Sbjct: 254 SYQCEPDNVTCLLLLQACA 272


>ref|XP_006477459.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Citrus sinensis]
          Length = 580

 Score =  275 bits (703), Expect = 7e-72
 Identities = 131/197 (66%), Positives = 160/197 (81%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           IHAR+L+DG+Q D  L+TTLM  Y+  +   +A ++FDE+PQRDTV WNVLIS Y  N++
Sbjct: 127 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWNVLISCYIRNQR 186

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           +RDAL LFD +     G KPDDVTCLL+LQACAHLGAL+FGE++H YI E+GYG  +NL 
Sbjct: 187 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 246

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           NSLIAMYS+CG L  AF+VF+G  +K+VV+WSAMISGLAMNGHGRDAI+AF  M+R GV+
Sbjct: 247 NSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIEAFGAMQRAGVF 306

Query: 541 PDDQTFTGVLSACSHNG 591
           PDDQTFTGVLSACSH G
Sbjct: 307 PDDQTFTGVLSACSHCG 323



 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 6/181 (3%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           IH  I + G+ S   L  +L+  Y+ C +   A +VF  MP++D V+W+ +IS  A N  
Sbjct: 230 IHRYISEHGYGSKMNLCNSLIAMYSKCGSLGMAFEVFKGMPEKDVVSWSAMISGLAMNGH 289

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
            RDA+  F  MQ    G  PDD T   +L AC+H G +D G    + + ++ +G   N+ 
Sbjct: 290 GRDAIEAFGAMQRA--GVFPDDQTFTGVLSACSHCGLVDEGMVFLDRMSKD-FGILPNIH 346

Query: 361 N--SLIAMYSRCGCLDKAFQVFQGTSDK-NVVTWSAMISGLAMNGH---GRDAIKAFIEM 522
           +   ++ +  R G LD+A+Q+      K +   W  ++    ++ H   G   I+  IE+
Sbjct: 347 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 406

Query: 523 R 525
           +
Sbjct: 407 K 407



 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
 Frame = +1

Query: 97  ARQVFDEMPQRDTVTWNVLISFYANNRQSRDALSLFDVMQNPMYGSKPDDVTCLLLLQAC 276
           +RQ+ D +P+ +   +N ++  Y+ +    +   LF+ M+     + P    C   ++ C
Sbjct: 58  SRQILDHIPRPNVSHYNTMVRAYSMSSSPEEGFYLFEKMRQKRIPTNP--FACSFAIKCC 115

Query: 277 AHLGALDFGERVHNYIDENGYGEALNLRNSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWS 456
               +L  G ++H  +  +GY     L  +L+ +YS      +A ++F     ++ V W+
Sbjct: 116 MKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPQRDTVAWN 175

Query: 457 AMISGLAMNGHGRDAIKAFIEMRR--MGVYPDDQTFTGVLSACSHNG 591
            +IS    N   RDA+  F  + R   G  PDD T   VL AC+H G
Sbjct: 176 VLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 222


>ref|XP_007037367.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma
           cacao] gi|508774612|gb|EOY21868.1| Pentatricopeptide
           repeat superfamily protein isoform 2 [Theobroma cacao]
          Length = 625

 Score =  275 bits (703), Expect = 7e-72
 Identities = 136/197 (69%), Positives = 163/197 (82%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           IH RIL DG QSD LLLTTLM FY++  +  +A +VFDE+ ++DTV WNVLIS Y  N +
Sbjct: 188 IHGRILGDGFQSDSLLLTTLMDFYSSFASRDEACKVFDEISKKDTVAWNVLISCYLRNGR 247

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           +RD L LFD M+N     KPDDVTCLL++QACA+LGALDFGE+VH YI+E GYG +LNLR
Sbjct: 248 TRDVLILFDSMKNEG-ACKPDDVTCLLVVQACANLGALDFGEKVHGYIEECGYGVSLNLR 306

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           NSLIAMYSRCGCL+KA+ VF+G  +KNV++WSAMISGLAMNG+GRDAI AF EM+RMG+ 
Sbjct: 307 NSLIAMYSRCGCLEKAYGVFKGMPEKNVISWSAMISGLAMNGYGRDAILAFEEMQRMGIV 366

Query: 541 PDDQTFTGVLSACSHNG 591
           PD+QTFTGVLSACSH G
Sbjct: 367 PDEQTFTGVLSACSHCG 383



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 5/180 (2%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +H  I + G+     L  +L+  Y+ C     A  VF  MP+++ ++W+ +IS  A N  
Sbjct: 290 VHGYIEECGYGVSLNLRNSLIAMYSRCGCLEKAYGVFKGMPEKNVISWSAMISGLAMNGY 349

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFG-ERVHNYIDENGYGEALNL 357
            RDA+  F+ MQ    G  PD+ T   +L AC+H G +D G E +H    E G    ++ 
Sbjct: 350 GRDAILAFEEMQR--MGIVPDEQTFTGVLSACSHCGLVDEGMEFLHQMSKEFGIEPNIHH 407

Query: 358 RNSLIAMYSRCGCLDKAFQVFQGTSDK-NVVTWSAMISGLAMNGH---GRDAIKAFIEMR 525
              ++ +  R G LD+A+QV      K +   W  ++    ++GH   G   I+  IE++
Sbjct: 408 YGCMVDLLGRAGLLDQAYQVIISMGVKPDATIWRTLLGACRIHGHVTLGERVIEHLIELK 467



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
 Frame = +1

Query: 97  ARQVFDEMPQRDTVTWNVLISFYANNRQSRDALSLFDVMQNPMYGSKPDDVTCLLLLQAC 276
           +R  F ++ +     ++ LI  Y+++   +DA  L+  M     G KPD V+   +L++C
Sbjct: 119 SRHFFSQIDKPSASHYSTLIRAYSSSNSPKDAFFLYKEMTQK--GLKPDPVSSSFVLKSC 176

Query: 277 AHLGALDFGERVHNYIDENGYGEALNLRNSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWS 456
               +L  G ++H  I  +G+     L  +L+  YS     D+A +VF   S K+ V W+
Sbjct: 177 MKFSSLVCGLQIHGRILGDGFQSDSLLLTTLMDFYSSFASRDEACKVFDEISKKDTVAWN 236

Query: 457 AMISGLAMNGHGRDAIKAFIEMRRMGV-YPDDQTFTGVLSACSHNG 591
            +IS    NG  RD +  F  M+  G   PDD T   V+ AC++ G
Sbjct: 237 VLISCYLRNGRTRDVLILFDSMKNEGACKPDDVTCLLVVQACANLG 282


>ref|XP_007037366.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|508774611|gb|EOY21867.1| Pentatricopeptide
           repeat superfamily protein isoform 1 [Theobroma cacao]
          Length = 640

 Score =  275 bits (703), Expect = 7e-72
 Identities = 136/197 (69%), Positives = 163/197 (82%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           IH RIL DG QSD LLLTTLM FY++  +  +A +VFDE+ ++DTV WNVLIS Y  N +
Sbjct: 188 IHGRILGDGFQSDSLLLTTLMDFYSSFASRDEACKVFDEISKKDTVAWNVLISCYLRNGR 247

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           +RD L LFD M+N     KPDDVTCLL++QACA+LGALDFGE+VH YI+E GYG +LNLR
Sbjct: 248 TRDVLILFDSMKNEG-ACKPDDVTCLLVVQACANLGALDFGEKVHGYIEECGYGVSLNLR 306

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           NSLIAMYSRCGCL+KA+ VF+G  +KNV++WSAMISGLAMNG+GRDAI AF EM+RMG+ 
Sbjct: 307 NSLIAMYSRCGCLEKAYGVFKGMPEKNVISWSAMISGLAMNGYGRDAILAFEEMQRMGIV 366

Query: 541 PDDQTFTGVLSACSHNG 591
           PD+QTFTGVLSACSH G
Sbjct: 367 PDEQTFTGVLSACSHCG 383



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 5/180 (2%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +H  I + G+     L  +L+  Y+ C     A  VF  MP+++ ++W+ +IS  A N  
Sbjct: 290 VHGYIEECGYGVSLNLRNSLIAMYSRCGCLEKAYGVFKGMPEKNVISWSAMISGLAMNGY 349

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFG-ERVHNYIDENGYGEALNL 357
            RDA+  F+ MQ    G  PD+ T   +L AC+H G +D G E +H    E G    ++ 
Sbjct: 350 GRDAILAFEEMQR--MGIVPDEQTFTGVLSACSHCGLVDEGMEFLHQMSKEFGIEPNIHH 407

Query: 358 RNSLIAMYSRCGCLDKAFQVFQGTSDK-NVVTWSAMISGLAMNGH---GRDAIKAFIEMR 525
              ++ +  R G LD+A+QV      K +   W  ++    ++GH   G   I+  IE++
Sbjct: 408 YGCMVDLLGRAGLLDQAYQVIISMGVKPDATIWRTLLGACRIHGHVTLGERVIEHLIELK 467



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
 Frame = +1

Query: 97  ARQVFDEMPQRDTVTWNVLISFYANNRQSRDALSLFDVMQNPMYGSKPDDVTCLLLLQAC 276
           +R  F ++ +     ++ LI  Y+++   +DA  L+  M     G KPD V+   +L++C
Sbjct: 119 SRHFFSQIDKPSASHYSTLIRAYSSSNSPKDAFFLYKEMTQK--GLKPDPVSSSFVLKSC 176

Query: 277 AHLGALDFGERVHNYIDENGYGEALNLRNSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWS 456
               +L  G ++H  I  +G+     L  +L+  YS     D+A +VF   S K+ V W+
Sbjct: 177 MKFSSLVCGLQIHGRILGDGFQSDSLLLTTLMDFYSSFASRDEACKVFDEISKKDTVAWN 236

Query: 457 AMISGLAMNGHGRDAIKAFIEMRRMGV-YPDDQTFTGVLSACSHNG 591
            +IS    NG  RD +  F  M+  G   PDD T   V+ AC++ G
Sbjct: 237 VLISCYLRNGRTRDVLILFDSMKNEGACKPDDVTCLLVVQACANLG 282


>ref|XP_004235997.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Solanum lycopersicum]
          Length = 621

 Score =  275 bits (702), Expect = 9e-72
 Identities = 132/197 (67%), Positives = 167/197 (84%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           IHARIL+DGHQSD  LLTTLM FY++ +  ++A +VFDEM  RDT+ WNVLIS Y  NR+
Sbjct: 169 IHARILRDGHQSDGRLLTTLMDFYSSNEKYTEACKVFDEMSHRDTIAWNVLISVYMRNRR 228

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           +RDAL LFD+MQ+  Y  + DDVTCL+LLQACA+L AL FGERVH Y +E+G+ +A+N+ 
Sbjct: 229 TRDALGLFDMMQSS-YDCQSDDVTCLMLLQACANLNALAFGERVHRYCEEHGFDKAMNIC 287

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           N+LI MYSRCGCL+KAF+VF+G ++K+VV+W+AMISGLA NG+GRDAI+AF EM+R+GV 
Sbjct: 288 NALITMYSRCGCLEKAFEVFKGMTEKDVVSWTAMISGLASNGYGRDAIEAFREMQRVGVS 347

Query: 541 PDDQTFTGVLSACSHNG 591
           PDDQTFTGVLSACSH+G
Sbjct: 348 PDDQTFTGVLSACSHSG 364



 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 5/180 (2%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +H    + G      +   L+  Y+ C     A +VF  M ++D V+W  +IS  A+N  
Sbjct: 271 VHRYCEEHGFDKAMNICNALITMYSRCGCLEKAFEVFKGMTEKDVVSWTAMISGLASNGY 330

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYID-ENGYGEALNL 357
            RDA+  F  MQ    G  PDD T   +L AC+H G LD G    N +  E G    ++ 
Sbjct: 331 GRDAIEAFREMQR--VGVSPDDQTFTGVLSACSHSGLLDEGRMFFNSMSKEFGISPNIHH 388

Query: 358 RNSLIAMYSRCGCLDKAFQVFQGTSDK-NVVTWSAMISGLAMNGH---GRDAIKAFIEMR 525
              ++ +  R G +D+A+ +      K +   W  ++    ++     G   I+  IE++
Sbjct: 389 YGCVVDLMGRAGMVDEAYNLINSMKVKPDATIWRTLLGACRIHHQAELGEQVIERLIELK 448



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
 Frame = +1

Query: 97  ARQVFDEMPQRDTVTWNVLISFYANNRQSRDALSLFDVMQNPMYGSKPDDVTCLLLLQAC 276
           A QVF +  + D   +N++I  Y  +    +   L+  M     G  P+ +T   +   C
Sbjct: 100 ASQVFSKFRKPDVFQYNIMIRAYGMSDSPGNGFMLYQEMLRS--GVSPNSLTSSFVTNCC 157

Query: 277 AHLGALDFGERVHNYIDENGYGEALNLRNSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWS 456
             +G+L  G ++H  I  +G+     L  +L+  YS      +A +VF   S ++ + W+
Sbjct: 158 IKIGSLFGGLQIHARILRDGHQSDGRLLTTLMDFYSSNEKYTEACKVFDEMSHRDTIAWN 217

Query: 457 AMISGLAMNGHGRDAIKAFIEMR-RMGVYPDDQTFTGVLSACSH 585
            +IS    N   RDA+  F  M+       DD T   +L AC++
Sbjct: 218 VLISVYMRNRRTRDALGLFDMMQSSYDCQSDDVTCLMLLQACAN 261


>ref|XP_007210264.1| hypothetical protein PRUPE_ppa003212mg [Prunus persica]
           gi|462405999|gb|EMJ11463.1| hypothetical protein
           PRUPE_ppa003212mg [Prunus persica]
          Length = 592

 Score =  274 bits (701), Expect = 1e-71
 Identities = 130/197 (65%), Positives = 164/197 (83%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +HARIL+ GH+SD  LLTTLM  Y+ C    +A ++FDEMP+RD V WNVLIS   +N +
Sbjct: 139 VHARILRGGHESDSRLLTTLMDLYSICGKCDEACKLFDEMPKRDVVAWNVLISCCLHNNR 198

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           +RDA+SLFD+M++  +  +PD+VTCLL+LQAC++L AL+FGERVH YI+E+GY  A NL 
Sbjct: 199 TRDAVSLFDIMRSETHRCEPDEVTCLLMLQACSNLNALEFGERVHKYIEEHGYDGASNLC 258

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           NSLIAMYSRCGCLDKA++VF+G  DKNVV+WSAMISGLA+NG+GR+AI+AF EM++MGV 
Sbjct: 259 NSLIAMYSRCGCLDKAYEVFKGMKDKNVVSWSAMISGLAVNGYGREAIEAFGEMQKMGVL 318

Query: 541 PDDQTFTGVLSACSHNG 591
           PDDQTFTGVL ACSH G
Sbjct: 319 PDDQTFTGVLCACSHCG 335



 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +H  I + G+     L  +L+  Y+ C     A +VF  M  ++ V+W+ +IS  A N  
Sbjct: 242 VHKYIEEHGYDGASNLCNSLIAMYSRCGCLDKAYEVFKGMKDKNVVSWSAMISGLAVNGY 301

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
            R+A+  F  MQ    G  PDD T   +L AC+H G +D G    + + ++ +G   N+ 
Sbjct: 302 GREAIEAFGEMQK--MGVLPDDQTFTGVLCACSHCGLVDEGMVFFDRMSKD-FGVVPNIH 358

Query: 361 N--SLIAMYSRCGCLDKAFQVFQGTSDK-NVVTWSAMISGLAMNGH 489
           +   ++ +  R G LD+A+Q+      K +   W  ++ G  ++GH
Sbjct: 359 HYGCMVDLLGRAGRLDQAYQLILSMDIKPDSTIWRTLLGGCRIHGH 404



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 6/201 (2%)
 Frame = +1

Query: 1   IHARILQDG---HQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYAN 171
           IHA I++       + CL   +L+G  +   + S +R+ FD++ +     +N ++  Y+ 
Sbjct: 36  IHAHIVRTSLVLEPTICLQFLSLVGL-SPLKSISYSRRFFDQIAKPTAFQYNTMVRAYSI 94

Query: 172 NRQSRDALSLF-DVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEA 348
           +    +  S++ D+++    G + D +    ++++C  + +L  G +VH  I   G+   
Sbjct: 95  SDSPEEGFSMYRDLLRR---GLRADALASSFVIKSCIRVSSLLGGIQVHARILRGGHESD 151

Query: 349 LNLRNSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMR- 525
             L  +L+ +YS CG  D+A ++F     ++VV W+ +IS    N   RDA+  F  MR 
Sbjct: 152 SRLLTTLMDLYSICGKCDEACKLFDEMPKRDVVAWNVLISCCLHNNRTRDAVSLFDIMRS 211

Query: 526 -RMGVYPDDQTFTGVLSACSH 585
                 PD+ T   +L ACS+
Sbjct: 212 ETHRCEPDEVTCLLMLQACSN 232


>ref|XP_006364594.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Solanum tuberosum]
          Length = 621

 Score =  273 bits (699), Expect = 2e-71
 Identities = 131/197 (66%), Positives = 166/197 (84%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           IHARIL+DGH SD  LLTTLM FY++ +  ++A +VFDEM  RDT+ WNVLIS Y  NR+
Sbjct: 169 IHARILRDGHPSDGRLLTTLMDFYSSNEKYTEACKVFDEMSHRDTIAWNVLISVYMRNRR 228

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           +RDAL +FD+MQ+  Y  +PDDVTCL+LLQACA+L AL FGERVH Y +E+G+ +A+N+ 
Sbjct: 229 TRDALGVFDMMQSS-YDCQPDDVTCLMLLQACANLNALAFGERVHRYCEEHGFDKAMNIC 287

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           N+LI MYSRCGCL+KAF+VF+G ++K+VV+W+AMISGLA NG+GRDAI+AF EM+R GV 
Sbjct: 288 NALITMYSRCGCLEKAFEVFKGMTEKDVVSWTAMISGLASNGYGRDAIEAFREMQRAGVS 347

Query: 541 PDDQTFTGVLSACSHNG 591
           PDDQTFTGVLSACSH+G
Sbjct: 348 PDDQTFTGVLSACSHSG 364



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 5/180 (2%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +H    + G      +   L+  Y+ C     A +VF  M ++D V+W  +IS  A+N  
Sbjct: 271 VHRYCEEHGFDKAMNICNALITMYSRCGCLEKAFEVFKGMTEKDVVSWTAMISGLASNGY 330

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDEN-GYGEALNL 357
            RDA+  F  MQ    G  PDD T   +L AC+H G LD G    N + +  G    ++ 
Sbjct: 331 GRDAIEAFREMQRA--GVSPDDQTFTGVLSACSHSGLLDEGRMFFNSMSKKFGISPNIHH 388

Query: 358 RNSLIAMYSRCGCLDKAFQVFQGTSDK-NVVTWSAMISGLAMNGH---GRDAIKAFIEMR 525
              ++ +  R G +D+A+ +      K +   W  ++    ++     G   I+  IE++
Sbjct: 389 YGCVVDLMGRAGMVDEAYNLINSMKVKPDATIWRTLLGACRIHHQADLGEQVIERLIELK 448



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
 Frame = +1

Query: 97  ARQVFDEMPQRDTVTWNVLISFYANNRQSRDALSLFDVMQNPMYGSKPDDVTCLLLLQAC 276
           A +VF +  + D   +N++I  Y  +    +   L+  M     G  P+ +T   +   C
Sbjct: 100 ACRVFSKFSKPDVFQYNIMIRAYGMSDSPGNGFMLYQEMLRS--GVSPNSLTSSFVTNCC 157

Query: 277 AHLGALDFGERVHNYIDENGYGEALNLRNSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWS 456
              G+L  G ++H  I  +G+     L  +L+  YS      +A +VF   S ++ + W+
Sbjct: 158 IKSGSLFGGLQIHARILRDGHPSDGRLLTTLMDFYSSNEKYTEACKVFDEMSHRDTIAWN 217

Query: 457 AMISGLAMNGHGRDAIKAFIEMR-RMGVYPDDQTFTGVLSACSH 585
            +IS    N   RDA+  F  M+      PDD T   +L AC++
Sbjct: 218 VLISVYMRNRRTRDALGVFDMMQSSYDCQPDDVTCLMLLQACAN 261


>ref|XP_006440604.1| hypothetical protein CICLE_v10018999mg [Citrus clementina]
           gi|557542866|gb|ESR53844.1| hypothetical protein
           CICLE_v10018999mg [Citrus clementina]
          Length = 745

 Score =  271 bits (693), Expect = 1e-70
 Identities = 129/197 (65%), Positives = 159/197 (80%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           IHAR+L+DG+Q D  L+TTLM  Y+  +   +A ++FDE+P+RDTV WNVLIS Y  N++
Sbjct: 292 IHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPRRDTVAWNVLISCYIRNQR 351

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           +RDAL LFD +     G KPDDVTCLL+LQACAHLGAL+FGE++H YI E+GYG  +NL 
Sbjct: 352 TRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLGALEFGEKIHRYISEHGYGSKMNLC 411

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           NSLIA YS+CG LD AF+VF+G  +K+VV+WSAMISGLAMNGHGRDAI++F  M+R GV 
Sbjct: 412 NSLIATYSKCGSLDMAFEVFKGMPEKDVVSWSAMISGLAMNGHGRDAIESFGAMQRAGVL 471

Query: 541 PDDQTFTGVLSACSHNG 591
           PDDQTFTGVLSACSH G
Sbjct: 472 PDDQTFTGVLSACSHCG 488



 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 6/181 (3%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           IH  I + G+ S   L  +L+  Y+ C +   A +VF  MP++D V+W+ +IS  A N  
Sbjct: 395 IHRYISEHGYGSKMNLCNSLIATYSKCGSLDMAFEVFKGMPEKDVVSWSAMISGLAMNGH 454

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
            RDA+  F  MQ    G  PDD T   +L AC+H G +D G    + + ++ +G   N+ 
Sbjct: 455 GRDAIESFGAMQRA--GVLPDDQTFTGVLSACSHCGLVDEGMMFLDRMSKD-FGILPNIH 511

Query: 361 N--SLIAMYSRCGCLDKAFQVFQGTSDK-NVVTWSAMISGLAMNGH---GRDAIKAFIEM 522
           +   ++ +  R G LD+A+Q+      K +   W  ++    ++ H   G   I+  IE+
Sbjct: 512 HYGCVVDLLGRAGLLDQAYQLITSMGVKPDSTIWRTLLGACRIHKHVTLGERVIEHLIEL 571

Query: 523 R 525
           +
Sbjct: 572 K 572



 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
 Frame = +1

Query: 97  ARQVFDEMPQRDTVTWNVLISFYANNRQSRDALSLFDVMQNPMYGSKPDDVTCLLLLQAC 276
           +RQ+ D +P+ +   +N ++  Y+ +    +   LF+ M+     + P    C   ++ C
Sbjct: 223 SRQILDHIPRPNVSHYNTMVRAYSMSSSPEEGFYLFEKMRQKRIPTNP--FACSFAIKCC 280

Query: 277 AHLGALDFGERVHNYIDENGYGEALNLRNSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWS 456
               +L  G ++H  +  +GY     L  +L+ +YS      +A ++F     ++ V W+
Sbjct: 281 MKFCSLMGGLQIHARVLRDGYQLDSQLMTTLMDLYSTFEKSFEACKLFDEIPRRDTVAWN 340

Query: 457 AMISGLAMNGHGRDAIKAFIEMRR--MGVYPDDQTFTGVLSACSHNG 591
            +IS    N   RDA+  F  + R   G  PDD T   VL AC+H G
Sbjct: 341 VLISCYIRNQRTRDALCLFDNLNREESGCKPDDVTCLLVLQACAHLG 387


>ref|XP_002304264.2| hypothetical protein POPTR_0003s07210g [Populus trichocarpa]
           gi|550342611|gb|EEE79243.2| hypothetical protein
           POPTR_0003s07210g [Populus trichocarpa]
          Length = 636

 Score =  270 bits (691), Expect = 2e-70
 Identities = 136/197 (69%), Positives = 158/197 (80%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +HARIL DGHQSD LLLT LM  Y+ CD GS+A +VFDEM QRDT+ WNVLIS Y  NR+
Sbjct: 183 VHARILSDGHQSDSLLLTNLMDLYSLCDKGSEACKVFDEMRQRDTIAWNVLISCYMRNRR 242

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           +RD L +FD M +   G +PDDVTCLLLLQACA+LGAL+FGE+VH +I E GY  A NL 
Sbjct: 243 TRDVLVIFDGMLSGELGCEPDDVTCLLLLQACANLGALEFGEKVHGHIVERGYDNATNLC 302

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           NSLIAMYS+ G LDKAF VF+G  +KNVVTWSA+ISGLAMNG+GR+AI AF EM +MGV 
Sbjct: 303 NSLIAMYSQFGNLDKAFGVFKGMHNKNVVTWSAIISGLAMNGYGREAIGAFEEMLKMGVL 362

Query: 541 PDDQTFTGVLSACSHNG 591
           PDD TFTGVLSACS+ G
Sbjct: 363 PDDLTFTGVLSACSNCG 379



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 6/181 (3%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +H  I++ G+ +   L  +L+  Y+   N   A  VF  M  ++ VTW+ +IS  A N  
Sbjct: 286 VHGHIVERGYDNATNLCNSLIAMYSQFGNLDKAFGVFKGMHNKNVVTWSAIISGLAMNGY 345

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
            R+A+  F+ M     G  PDD+T   +L AC++ G +D G  +   + +  +G   N+ 
Sbjct: 346 GREAIGAFEEMLK--MGVLPDDLTFTGVLSACSNCGLVDKGMIIFARMSKE-FGIVPNIH 402

Query: 361 N--SLIAMYSRCGCLDKAFQVFQGTSDK-NVVTWSAMISGLAMNGH---GRDAIKAFIEM 522
           +   ++ +  R G L +A+Q+      K +   W  ++    ++ +   G   ++  IE+
Sbjct: 403 HYGCMVDLLGRAGQLHQAYQLIMSMRVKPDSTIWRTLLGACRIHRNVILGEHVVEHLIEL 462

Query: 523 R 525
           +
Sbjct: 463 K 463



 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
 Frame = +1

Query: 91  SDARQVFDEMPQRDTVTWNVLISFYANNRQSRDALSLFDVMQNPMYGSKPDDVTCLLLLQ 270
           S +RQ F ++P      +N LI  Y+ +    +   ++  M+    G + D V+   +++
Sbjct: 112 SYSRQFFSQIPNPSVFLYNTLIRAYSMSSSPTEGFFMYQEMRKK--GLRADPVSLSFVIR 169

Query: 271 ACAHLGALDFGERVHNYIDENGYGEALNLRNSLIAMYSRCGCLDKAFQVFQGTSDKNVVT 450
               + +L   E+VH  I  +G+     L  +L+ +YS C    +A +VF     ++ + 
Sbjct: 170 CYIRICSLIGCEQVHARILSDGHQSDSLLLTNLMDLYSLCDKGSEACKVFDEMRQRDTIA 229

Query: 451 WSAMISGLAMNGHGRDAIKAFIEM--RRMGVYPDDQTFTGVLSACSHNG 591
           W+ +IS    N   RD +  F  M    +G  PDD T   +L AC++ G
Sbjct: 230 WNVLISCYMRNRRTRDVLVIFDGMLSGELGCEPDDVTCLLLLQACANLG 278


>ref|XP_002514751.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546355|gb|EEF47857.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 335

 Score =  270 bits (691), Expect = 2e-70
 Identities = 129/197 (65%), Positives = 160/197 (81%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +HAR+L+DG QSD LLLT LM  Y+ C+ G++A +VFDE+PQRDTV WNVLIS +  N++
Sbjct: 52  VHARLLRDGFQSDSLLLTNLMDLYSFCEKGTEACRVFDEIPQRDTVAWNVLISCFIRNQR 111

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           +RD L LFD M +  +G +PDDVTCLLL+QAC++LGAL+FGE+VH YI  + YG+  NL 
Sbjct: 112 TRDVLGLFDDMVSGEFGCEPDDVTCLLLVQACSNLGALEFGEKVHLYIQGHRYGDKTNLC 171

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           NSLI MYSRCGCLDKA+ VF+   +KNVVTWSAMISG AMNG+GR AI+ F +M+R+GV 
Sbjct: 172 NSLITMYSRCGCLDKAYGVFKNMPNKNVVTWSAMISGFAMNGYGRQAIETFGKMQRIGVL 231

Query: 541 PDDQTFTGVLSACSHNG 591
           PDDQTFTGVLSACSH G
Sbjct: 232 PDDQTFTGVLSACSHCG 248



 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 33/86 (38%), Positives = 45/86 (52%)
 Frame = +1

Query: 46  LLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQSRDALSLFDVMQNPM 225
           L  +L+  Y+ C     A  VF  MP ++ VTW+ +IS +A N   R A+  F  MQ   
Sbjct: 170 LCNSLITMYSRCGCLDKAYGVFKNMPNKNVVTWSAMISGFAMNGYGRQAIETFGKMQR-- 227

Query: 226 YGSKPDDVTCLLLLQACAHLGALDFG 303
            G  PDD T   +L AC+H G +D G
Sbjct: 228 IGVLPDDQTFTGVLSACSHCGLVDEG 253


>ref|XP_006659434.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Oryza brachyantha]
          Length = 595

 Score =  263 bits (671), Expect = 4e-68
 Identities = 122/197 (61%), Positives = 157/197 (79%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +HA ++ +GH  D LL T+LM  YA C +G  AR++FDEMP +DTV WNVLI+ Y  NR+
Sbjct: 141 LHANVVVEGHVRDALLATSLMRAYAACGDGDAARKMFDEMPVKDTVAWNVLITCYTKNRR 200

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           ++DAL +FD M++   G++PDDVTC+LLLQAC  LGALDFGE+V +Y  ++GYG  L +R
Sbjct: 201 TKDALKIFDEMRSGENGTEPDDVTCILLLQACTSLGALDFGEQVWDYAQDHGYGGELKVR 260

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           NSLI MY++CGC++KA+QVF GT +K+VVTWSAMISGLA NG G+DAI AF EM R G+ 
Sbjct: 261 NSLITMYTKCGCMEKAYQVFSGTPNKSVVTWSAMISGLAANGFGKDAISAFEEMGRSGIA 320

Query: 541 PDDQTFTGVLSACSHNG 591
           PD+QTFTGVLSACSH+G
Sbjct: 321 PDEQTFTGVLSACSHSG 337



 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 6/173 (3%)
 Frame = +1

Query: 25  GHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQSRDALSLF 204
           G+  +  +  +L+  Y  C     A QVF   P +  VTW+ +IS  A N   +DA+S F
Sbjct: 252 GYGGELKVRNSLITMYTKCGCMEKAYQVFSGTPNKSVVTWSAMISGLAANGFGKDAISAF 311

Query: 205 DVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYI-DENGYGEALNLRNSLIAMY 381
           + M     G  PD+ T   +L AC+H G +D G +  + +  E      ++    ++ + 
Sbjct: 312 EEMGRS--GIAPDEQTFTGVLSACSHSGLVDEGFKFFDIMCHEYQLMPNVHHYGCMVDLM 369

Query: 382 SRCGCLDKAFQ--VFQGTSDKNVVTWSAMISGLAMNGH---GRDAIKAFIEMR 525
            R G L++A++  V +     +   W  ++    ++GH   G   I   IE++
Sbjct: 370 GRAGLLNQAYELVVREMRVAPDATIWRTLLGACRVHGHVDLGERVINHLIELK 422


>ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group]
           gi|42407498|dbj|BAD10615.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|42409483|dbj|BAD09839.1| pentatricopeptide
           (PPR) repeat-containing protein-like [Oryza sativa
           Japonica Group] gi|113623845|dbj|BAF23790.1|
           Os08g0434000 [Oryza sativa Japonica Group]
          Length = 601

 Score =  262 bits (670), Expect = 5e-68
 Identities = 124/197 (62%), Positives = 153/197 (77%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +HA ++ +GH  D LL T+L+  YA C +G  AR+VFDEMP RDT+ WNVLI+ Y  NR+
Sbjct: 147 LHANVVAEGHSPDALLATSLVSSYAACGDGDSARKVFDEMPVRDTIAWNVLITCYTRNRR 206

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           ++DAL LFD M+    G++PDDVTC+LLLQAC  LGALDFGE+V  Y  ++GYG  L +R
Sbjct: 207 TKDALKLFDAMRGGENGAEPDDVTCILLLQACTSLGALDFGEKVWEYAVDHGYGGELKVR 266

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           NSLI MY++CGC+DKA+QVF  T  K+VVTWSAMISGLA NG G+DAI AF EM R GV 
Sbjct: 267 NSLITMYTKCGCVDKAYQVFCETPKKSVVTWSAMISGLASNGFGKDAISAFEEMGRSGVA 326

Query: 541 PDDQTFTGVLSACSHNG 591
           PD+QTFTGVLSACSH+G
Sbjct: 327 PDEQTFTGVLSACSHSG 343



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 8/175 (4%)
 Frame = +1

Query: 25  GHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQSRDALSLF 204
           G+  +  +  +L+  Y  C     A QVF E P++  VTW+ +IS  A+N   +DA+S F
Sbjct: 258 GYGGELKVRNSLITMYTKCGCVDKAYQVFCETPKKSVVTWSAMISGLASNGFGKDAISAF 317

Query: 205 DVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYI-DENGYGEALNLRNSLIAMY 381
           + M     G  PD+ T   +L AC+H G +D G +  + +  E      ++    ++ + 
Sbjct: 318 EEMGRS--GVAPDEQTFTGVLSACSHSGLVDEGFKFFDIMCYEYQLKPNVHHYGCMVDLM 375

Query: 382 SRCGCLDKAFQVFQGTSDKNV----VTWSAMISGLAMNGH---GRDAIKAFIEMR 525
            R G LD+A+++     D  V      W  ++    ++GH   G   I   IE++
Sbjct: 376 GRAGLLDQAYELV--VKDMRVAPDATIWRTLLGACRIHGHIDLGERVINHLIELK 428



 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
 Frame = +1

Query: 280 HLGALDFGERVHNYIDENGYGEALNLRNSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSA 459
           H  AL    ++H  +   G+     L  SL++ Y+ CG  D A +VF     ++ + W+ 
Sbjct: 137 HCRALAHARQLHANVVAEGHSPDALLATSLVSSYAACGDGDSARKVFDEMPVRDTIAWNV 196

Query: 460 MISGLAMNGHGRDAIKAFIEMR--RMGVYPDDQTFTGVLSACSHNG 591
           +I+    N   +DA+K F  MR    G  PDD T   +L AC+  G
Sbjct: 197 LITCYTRNRRTKDALKLFDAMRGGENGAEPDDVTCILLLQACTSLG 242


>ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g47530 gi|6522536|emb|CAB61979.1| putative protein
           [Arabidopsis thaliana] gi|62320272|dbj|BAD94558.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332644772|gb|AEE78293.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 591

 Score =  260 bits (664), Expect = 2e-67
 Identities = 122/198 (61%), Positives = 160/198 (80%), Gaps = 1/198 (0%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           IH +I  DG  SD LL+TTLM  Y+ C+N +DA +VFDE+P+RDTV+WNVL S Y  N++
Sbjct: 135 IHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKR 194

Query: 181 SRDALSLFDVMQNPMYGS-KPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNL 357
           +RD L LFD M+N + G  KPD VTCLL LQACA+LGALDFG++VH++IDENG   ALNL
Sbjct: 195 TRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNL 254

Query: 358 RNSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGV 537
            N+L++MYSRCG +DKA+QVF G  ++NVV+W+A+ISGLAMNG G++AI+AF EM + G+
Sbjct: 255 SNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGI 314

Query: 538 YPDDQTFTGVLSACSHNG 591
            P++QT TG+LSACSH+G
Sbjct: 315 SPEEQTLTGLLSACSHSG 332



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +H  I ++G      L  TL+  Y+ C +   A QVF  M +R+ V+W  LIS  A N  
Sbjct: 239 VHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGF 298

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
            ++A+  F+ M    +G  P++ T   LL AC+H G +  G    + +    +    NL 
Sbjct: 299 GKEAIEAFNEMLK--FGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLH 356

Query: 361 N--SLIAMYSRCGCLDKAFQVFQGTSDK-NVVTWSAMISGLAMNGH---GRDAIKAFIEM 522
           +   ++ +  R   LDKA+ + +    K +   W  ++    ++G    G   I   IE+
Sbjct: 357 HYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIEL 416

Query: 523 R 525
           +
Sbjct: 417 K 417


>ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Cucumis sativus]
          Length = 602

 Score =  258 bits (660), Expect = 7e-67
 Identities = 122/197 (61%), Positives = 156/197 (79%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           IHARI  +GHQ+D LLLT++M  Y++C    +A ++FDE+PQ+D V WNVLIS    N++
Sbjct: 149 IHARIFINGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKR 208

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
           +RDAL LF++MQ+P Y  +PD VTCLLLLQACA L AL+FGER+H YI ++GY    NL 
Sbjct: 209 TRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLC 268

Query: 361 NSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGVY 540
           NSLI+MYSRCG +DKA++VF   ++KNVV+WSAMISGL+MNGHGR+AI+AF EM++ GV 
Sbjct: 269 NSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVE 328

Query: 541 PDDQTFTGVLSACSHNG 591
           P D TFT VLSACSH G
Sbjct: 329 PGDHTFTAVLSACSHCG 345



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 46/167 (27%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           IH  I Q G+ ++  L  +L+  Y+ C     A +VFD+M +++ V+W+ +IS  + N  
Sbjct: 252 IHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGH 311

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
            R+A+  F  MQ    G +P D T   +L AC+H G +D G    + + +  +  A N+ 
Sbjct: 312 GREAIEAFWEMQKN--GVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQE-FMIAPNVH 368

Query: 361 N--SLIAMYSRCGCLDKAFQVFQGTSDK-NVVTWSAMISGLAMNGHG 492
           +   ++ +  R G LD+A+++      + +   W  ++    ++GHG
Sbjct: 369 HYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHG 415



 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 3/165 (1%)
 Frame = +1

Query: 97  ARQVFDEMPQRDTVTWNVLISFYANNRQSRDALSLFDVMQNPMYGSKPDDVTCLLLLQAC 276
           +R++FD +       +N ++  Y+ +R   + L ++  M+    G + D ++    +++C
Sbjct: 80  SRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQ--GVRADPLSSSFAVKSC 137

Query: 277 AHLGALDFGERVHNYIDENGYGEALNLRNSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWS 456
             L +L FG ++H  I  NG+     L  S++ +YS CG  ++A ++F     K+VV W+
Sbjct: 138 IKLLSLLFGIQIHARIFINGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWN 197

Query: 457 AMISGLAMNGHGRDAIKAFIEMRRMGVY---PDDQTFTGVLSACS 582
            +IS L  N   RDA+  F E+ +   Y   PD  T   +L AC+
Sbjct: 198 VLISCLTRNKRTRDALGLF-EIMQSPTYLCQPDKVTCLLLLQACA 241


>ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323404|gb|EFH53825.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 591

 Score =  258 bits (659), Expect = 9e-67
 Identities = 122/198 (61%), Positives = 160/198 (80%), Gaps = 1/198 (0%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           IH +I  DG  SD LL+TTLM  Y+ C+N +DA +VFDE+PQRDTV+WNVLIS Y  N++
Sbjct: 135 IHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPQRDTVSWNVLISCYLRNKR 194

Query: 181 SRDALSLFDVMQNPMYGS-KPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNL 357
           +RD L LFD M+N +    KPD+VTCLL LQACA+LGALDFG++VH++IDENG   ALNL
Sbjct: 195 TRDVLVLFDKMKNDVDRCVKPDNVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNL 254

Query: 358 RNSLIAMYSRCGCLDKAFQVFQGTSDKNVVTWSAMISGLAMNGHGRDAIKAFIEMRRMGV 537
            N+L++MYSRCG +DKA++VF    ++NVV+W+AMISGLAMNG G++AI+AF EM + G+
Sbjct: 255 SNTLVSMYSRCGSMDKAYEVFNRMRERNVVSWTAMISGLAMNGFGKEAIEAFNEMLKFGI 314

Query: 538 YPDDQTFTGVLSACSHNG 591
            P++QT TG+LSACSH+G
Sbjct: 315 SPEEQTLTGLLSACSHSG 332



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 6/181 (3%)
 Frame = +1

Query: 1   IHARILQDGHQSDCLLLTTLMGFYANCDNGSDARQVFDEMPQRDTVTWNVLISFYANNRQ 180
           +H  I ++G      L  TL+  Y+ C +   A +VF+ M +R+ V+W  +IS  A N  
Sbjct: 239 VHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYEVFNRMRERNVVSWTAMISGLAMNGF 298

Query: 181 SRDALSLFDVMQNPMYGSKPDDVTCLLLLQACAHLGALDFGERVHNYIDENGYGEALNLR 360
            ++A+  F+ M    +G  P++ T   LL AC+H G +D G    + +    +    NL 
Sbjct: 299 GKEAIEAFNEMLK--FGISPEEQTLTGLLSACSHSGLVDEGMMFFDRMRSGEFKIKPNLH 356

Query: 361 N--SLIAMYSRCGCLDKAFQVFQGTSDK-NVVTWSAMISGLAMNGH---GRDAIKAFIEM 522
           +   ++ +  R   LDKA+ + +    K +   W  ++    ++G+   G   I   IE 
Sbjct: 357 HYGCIVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGNVELGERVIAHLIEF 416

Query: 523 R 525
           +
Sbjct: 417 K 417