BLASTX nr result

ID: Akebia24_contig00044832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00044832
         (228 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]    74   2e-11
ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containi...    73   4e-11
ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containi...    73   4e-11
ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
gb|EXB93304.1| hypothetical protein L484_015292 [Morus notabilis]      70   4e-10
ref|XP_007015051.1| Pentatricopeptide repeat-containing protein ...    63   4e-08
ref|XP_006838346.1| hypothetical protein AMTR_s00103p00160020 [A...    58   2e-06

>emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
          Length = 841

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 36/66 (54%), Positives = 47/66 (71%)
 Frame = +3

Query: 30  STSIGFPTPPLSFKQTQTKDPKTWNSIIRNHTKLKNDQAILNSYTQMEILGVRADSLILP 209
           + S+G     LS  + Q KDPK WNS+I++   LKNDQAIL++YTQME LGV  ++  LP
Sbjct: 5   TASMGLQRLTLSPTKIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLP 64

Query: 210 LILKAC 227
           L+LKAC
Sbjct: 65  LVLKAC 70


>ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 37/70 (52%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
 Frame = +3

Query: 21  MEISTSIGFPTPPLSFKQTQTKD-PKTWNSIIRNHTKLKNDQAILNSYTQMEILGVRADS 197
           MEI+ ++ F     + +QT   +  K WNSII++HTKLKND AIL++YTQME LG+  DS
Sbjct: 1   MEIAVNLSFHGLSSTPEQTHLVNVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDS 60

Query: 198 LILPLILKAC 227
             +PL+LKAC
Sbjct: 61  ATMPLVLKAC 70


>ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 37/70 (52%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
 Frame = +3

Query: 21  MEISTSIGFPTPPLSFKQTQTKD-PKTWNSIIRNHTKLKNDQAILNSYTQMEILGVRADS 197
           MEI+ ++ F     + +QT   +  K WNSII++HTKLKND AIL++YTQME LG+  DS
Sbjct: 1   MEIAVNLSFHGLSSTPEQTHLVNVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDS 60

Query: 198 LILPLILKAC 227
             +PL+LKAC
Sbjct: 61  ATMPLVLKAC 70


>ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 35/63 (55%), Positives = 45/63 (71%)
 Frame = +3

Query: 39  IGFPTPPLSFKQTQTKDPKTWNSIIRNHTKLKNDQAILNSYTQMEILGVRADSLILPLIL 218
           +G     LS  + Q KDPK WNS+I++   LKNDQAIL++YTQME LGV  ++  LPL+L
Sbjct: 1   MGLQRLTLSPTKIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVL 60

Query: 219 KAC 227
           KAC
Sbjct: 61  KAC 63


>gb|EXB93304.1| hypothetical protein L484_015292 [Morus notabilis]
          Length = 849

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/57 (56%), Positives = 42/57 (73%)
 Frame = +3

Query: 57  PLSFKQTQTKDPKTWNSIIRNHTKLKNDQAILNSYTQMEILGVRADSLILPLILKAC 227
           P +F+ T   DPK WNS+I++HTK  ND AIL++YT ME LG+  D+  LPL+LKAC
Sbjct: 2   PNNFRIT---DPKDWNSVIKHHTKFNNDHAILSTYTHMESLGIAPDNATLPLVLKAC 55


>ref|XP_007015051.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
           gi|508785414|gb|EOY32670.1| Pentatricopeptide
           repeat-containing protein [Theobroma cacao]
          Length = 869

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
 Frame = +3

Query: 21  MEISTSIGFPTPPLSFKQTQTKDP--KTWNSIIRNHTKLKNDQAILNSYTQMEILGVRAD 194
           M I  S+G    P   K T  KD   K WNS+I+N T LKND AIL++Y++ME LG+  +
Sbjct: 1   MLIPFSLGLHFAP---KNTHIKDDPQKDWNSLIKNQTNLKNDHAILSTYSRMESLGLTPN 57

Query: 195 SLILPLILKAC 227
              LPL+LKAC
Sbjct: 58  RAALPLVLKAC 68


>ref|XP_006838346.1| hypothetical protein AMTR_s00103p00160020 [Amborella trichopoda]
           gi|548840814|gb|ERN00915.1| hypothetical protein
           AMTR_s00103p00160020 [Amborella trichopoda]
          Length = 610

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 29/69 (42%), Positives = 38/69 (55%)
 Frame = +3

Query: 21  MEISTSIGFPTPPLSFKQTQTKDPKTWNSIIRNHTKLKNDQAILNSYTQMEILGVRADSL 200
           ME S +I    P     +T  KD K WN I +   K +ND  IL  Y ++E LG+  DS 
Sbjct: 1   MESSIAITLQNPSFLASKTHKKDIKKWNPIFKRLAKERNDPKILKLYKEIEELGITVDSS 60

Query: 201 ILPLILKAC 227
            LP++LKAC
Sbjct: 61  SLPIVLKAC 69


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