BLASTX nr result

ID: Akebia24_contig00044258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00044258
         (417 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60570.1| hypothetical protein VITISV_000227 [Vitis vinifera]    58   2e-11
emb|CAN66743.1| hypothetical protein VITISV_043469 [Vitis vinifera]    61   7e-11
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    49   1e-10
emb|CCA28129.1| putative polyprotein [Albugo laibachii Nc14]           51   6e-10
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    47   4e-09
emb|CCA25182.1| putative polyprotein [Albugo laibachii Nc14]           52   4e-09
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    45   9e-09
gb|ABR16307.1| unknown [Picea sitchensis]                              49   1e-08
emb|CAN69680.1| hypothetical protein VITISV_003773 [Vitis vinifera]    46   2e-08
emb|CAN65235.1| hypothetical protein VITISV_040876 [Vitis vinifera]    47   3e-08
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...    50   3e-08
gb|AFB73911.1| polyprotein [Citrus sinensis]                           50   3e-08
emb|CAN69340.1| hypothetical protein VITISV_032634 [Vitis vinifera]    47   3e-08
emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]    47   3e-08
emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]    47   3e-08
emb|CAN62181.1| hypothetical protein VITISV_044399 [Vitis vinifera]    47   3e-08
emb|CAN74198.1| hypothetical protein VITISV_005765 [Vitis vinifera]    47   3e-08
emb|CAN71109.1| hypothetical protein VITISV_001479 [Vitis vinifera]    47   3e-08
emb|CAN76896.1| hypothetical protein VITISV_010605 [Vitis vinifera]    47   3e-08
dbj|BAA96887.1| copia-like retroelement pol polyprotein [Arabido...    48   3e-08

>emb|CAN60570.1| hypothetical protein VITISV_000227 [Vitis vinifera]
          Length = 605

 Score = 57.8 bits (138), Expect(2) = 2e-11
 Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
 Frame = -1

Query: 381 YFMKEKSEVFAKF-----EVENQMRRKIKYLRSDNGSKYKDGKFLKFCKENAL 238
           YFM  K E FAKF     EVENQ  RKIK LRSDNG++Y D KF + C+++ +
Sbjct: 26  YFMWHKLETFAKFKLWKTEVENQTGRKIKCLRSDNGTEYTDSKFTELCEQHGI 78



 Score = 36.6 bits (83), Expect(2) = 2e-11
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = -3

Query: 262 EVLQRKCIT*HFTVKKNLRQNEAVERINRTFMERERCMGLHA---EPFWAESI 113
           E+ ++  I  HF V+K  +QN   E +N T  ER +C+ L+      FW E++
Sbjct: 71  ELCEQHGIKRHFIVRKTPQQNNVAEMMNITIAERTQCLKLNVGLENKFWVEAV 123


>emb|CAN66743.1| hypothetical protein VITISV_043469 [Vitis vinifera]
          Length = 798

 Score = 61.2 bits (147), Expect(2) = 7e-11
 Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 5/57 (8%)
 Frame = -1

Query: 381 YFMKEKSEVFAKFEV-----ENQMRRKIKYLRSDNGSKYKDGKFLKFCKENALHDIL 226
           YFM+ KS+ FAKF++     ENQ  RK+K LR DNG+KY D KF++ C+++ + D L
Sbjct: 320 YFMRHKSKTFAKFKLWKAKAENQTGRKVKCLRLDNGTKYTDSKFMELCEQHGIRDTL 376



 Score = 31.2 bits (69), Expect(2) = 7e-11
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = -3

Query: 205 QNEAVERINRTFMERERCMGLHAE---PFWAESI 113
           +N  VE +NRT  ER RC+ L+ +    FW E++
Sbjct: 384 KNGVVETMNRTIAERARCLRLNVDLEKKFWPEAV 417


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 48.5 bits (114), Expect(2) = 1e-10
 Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
 Frame = -1

Query: 381 YFMKEKSEVFAKF-----EVENQMRRKIKYLRSDNGSKYKDGKFLKFCKE 247
           + MK K++V   F     EVENQ  RKIK LR+DNG +YK   FLK C++
Sbjct: 506 FTMKNKNDVLEIFLKWKDEVENQTGRKIKVLRTDNGGEYKSDPFLKVCQD 555



 Score = 43.1 bits (100), Expect(2) = 1e-10
 Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
 Frame = -3

Query: 265 LEVLQRKCIT*HFTVKKNLRQNEAVERINRTFMERERCMGLHAE---PFWAESI 113
           L+V Q   I  HFT++K  +QN   ER+N+  +E+ RCM  +AE    FWAE++
Sbjct: 550 LKVCQDCGIIRHFTIRKTPQQNGVSERMNKILVEKVRCMLSNAELGRKFWAEAV 603


>emb|CCA28129.1| putative polyprotein [Albugo laibachii Nc14]
          Length = 191

 Score = 50.8 bits (120), Expect(2) = 6e-10
 Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
 Frame = -1

Query: 381 YFMKEKSEVFAKFE-----VENQMRRKIKYLRSDNGSKYKDGKFLKFCKENAL 238
           YF++ K EVF+KF      VENQ  ++IK LRSDNG KY + KF   C+ + +
Sbjct: 90  YFIQSKREVFSKFNDFKALVENQFGKRIKCLRSDNGEKYVNIKFANVCRNSGM 142



 Score = 38.5 bits (88), Expect(2) = 6e-10
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
 Frame = -3

Query: 226 TVKKNLRQNEAVERINRTFMERERCMGLH---AEPFWAESI 113
           TV  + +QNE  ER+NRT  ER RCM  H    E +WAE++
Sbjct: 147 TVPYSPQQNELAERMNRTLTERARCMLSHMQVEEKWWAEAM 187


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 47.4 bits (111), Expect(2) = 4e-09
 Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
 Frame = -1

Query: 381 YFMKEKSEVFAKFE-----VENQMRRKIKYLRSDNGSKYKDGKFLKFCKENAL 238
           Y MK KSE F KF+     +ENQ  +KIK LR+DNG ++   +F +FCK+  +
Sbjct: 506 YMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGI 558



 Score = 38.9 bits (89), Expect(2) = 4e-09
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
 Frame = -3

Query: 232 HFTVKKNLRQNEAVERINRTFMERERCMGLHA---EPFWAESI 113
           H TV+   +QN   ER+N+T +ER RCM  +A     FWAE++
Sbjct: 561 HRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAV 603


>emb|CCA25182.1| putative polyprotein [Albugo laibachii Nc14]
          Length = 377

 Score = 52.0 bits (123), Expect(2) = 4e-09
 Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
 Frame = -1

Query: 381 YFMKEKSEVFAKFE-----VENQMRRKIKYLRSDNGSKYKDGKFLKFCKENAL 238
           YF++ K EVF+KF      VENQ  ++IK LRSDNG +Y D +F   CK + +
Sbjct: 60  YFIQTKGEVFSKFTEFKALVENQFEKRIKCLRSDNGGEYIDEQFANLCKNSGI 112



 Score = 34.3 bits (77), Expect(2) = 4e-09
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -3

Query: 226 TVKKNLRQNEAVERINRTFMERERCMGLH---AEPFWAESI 113
           TV  + +QN   ER+NRT  ER RCM  H    + +WAE++
Sbjct: 117 TVPYSPQQNGLPERMNRTLTERARCMLTHIQVEDKWWAEAM 157


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 45.4 bits (106), Expect(2) = 9e-09
 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
 Frame = -1

Query: 381 YFMKEKSEVFAKFE-----VENQMRRKIKYLRSDNGSKYKDGKFLKFCKENAL 238
           YF+K KSE F KF+     VE Q  RK+K LR+DNG ++    F   C++  +
Sbjct: 486 YFLKNKSETFLKFKEWKILVETQTSRKVKKLRTDNGLEFLSNDFNSLCQKEGI 538



 Score = 39.7 bits (91), Expect(2) = 9e-09
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
 Frame = -3

Query: 253 QRKCIT*HFTVKKNLRQNEAVERINRTFMERERCM----GLHAEPFWAES 116
           Q++ I  H TV+   +QN   ER+NRT +ER RCM    GL ++ FWAE+
Sbjct: 534 QKEGIARHRTVRYTPQQNGLAERMNRTILERVRCMLSSSGL-SKVFWAEA 582


>gb|ABR16307.1| unknown [Picea sitchensis]
          Length = 407

 Score = 48.5 bits (114), Expect(2) = 1e-08
 Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
 Frame = -1

Query: 381 YFMKEKSEVFAKFE-----VENQMRRKIKYLRSDNGSKYKDGKFLKFCKENAL 238
           YF+K K EVF KF+     VE Q  + IK LR+DNG +Y + +F  +CK N +
Sbjct: 170 YFLKNKDEVFEKFKEFKAFVEKQSGKSIKILRTDNGKEYVNKEFDHYCKYNGI 222



 Score = 36.2 bits (82), Expect(2) = 1e-08
 Identities = 22/42 (52%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = -3

Query: 226 TVKKNLRQNEAVERINRTFMERERCMGLHAE----PFWAESI 113
           TV    +QN   ER NRT ME  RCM LHA      FWAE+I
Sbjct: 227 TVPYTPQQNGVAERKNRTLMEMARCM-LHARNMDPKFWAEAI 267


>emb|CAN69680.1| hypothetical protein VITISV_003773 [Vitis vinifera]
          Length = 1058

 Score = 46.2 bits (108), Expect(2) = 2e-08
 Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
 Frame = -1

Query: 381 YFMKEKSEVFAKFE-----VENQMRRKIKYLRSDNGSKYKDGKFLKFC 253
           YF+K KS VF  F+     VE +   KIK LRSDNG +Y DG F ++C
Sbjct: 327 YFLKNKSNVFETFKKWKAMVETETGLKIKCLRSDNGGEYIDGGFNEYC 374



 Score = 37.7 bits (86), Expect(2) = 2e-08
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -3

Query: 226 TVKKNLRQNEAVERINRTFMERERCMGLHA---EPFWAESIKCI 104
           T+ +  +QN   ER+NRT  ER R M LHA   + FWA ++  +
Sbjct: 384 TIPRTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWANAVSTV 427


>emb|CAN65235.1| hypothetical protein VITISV_040876 [Vitis vinifera]
          Length = 1379

 Score = 47.4 bits (111), Expect(2) = 3e-08
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
 Frame = -1

Query: 381 YFMKEKSEVFAKFE-----VENQMRRKIKYLRSDNGSKYKDGKFLKFC 253
           YF+K KS+VF  F+     VE +   K+K LRSDNG +Y DG F ++C
Sbjct: 114 YFLKNKSDVFVTFKKWKVMVETETGLKVKCLRSDNGGEYIDGGFSEYC 161



 Score = 36.2 bits (82), Expect(2) = 3e-08
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -3

Query: 226 TVKKNLRQNEAVERINRTFMERERCMGLHA---EPFWAESI 113
           T+    +QN   ER+NRT  ER R M LHA   + FWA+++
Sbjct: 171 TIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAV 211


>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score = 49.7 bits (117), Expect(2) = 3e-08
 Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 5/53 (9%)
 Frame = -1

Query: 381 YFMKEKSEVFAKF-----EVENQMRRKIKYLRSDNGSKYKDGKFLKFCKENAL 238
           YF+K K E F KF      VENQ+ +K+K LR+DNG ++ + +F  +CKE+ +
Sbjct: 533 YFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGI 585



 Score = 33.9 bits (76), Expect(2) = 3e-08
 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
 Frame = -3

Query: 232 HFTVKKNLRQNEAVERINRTFMERERCM----GLHAEPFWAES 116
           H T     +QN   ER+NRT ME+ RC+    G+  E FWAE+
Sbjct: 588 HRTCTYTPQQNGVAERMNRTIMEKVRCLLNKSGVE-EVFWAEA 629


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 50.4 bits (119), Expect(2) = 3e-08
 Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
 Frame = -1

Query: 381 YFMKEKSEVFAKFE-----VENQMRRKIKYLRSDNGSKYKDGKFLKFCKENAL 238
           Y +K+KS+VF  F+     VE +  +KIK LR+DNG +Y DG+FL FCK+  +
Sbjct: 517 YPIKKKSDVFPVFKEYKAWVELESGKKIKCLRTDNGGEYTDGEFLAFCKQEGI 569



 Score = 33.1 bits (74), Expect(2) = 3e-08
 Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -3

Query: 229 FTVKKNLRQNEAVERINRTFMERERCM----GLHAEPFWAESIK 110
           FTV    +QN   ER+NRT  ER R M    GL    FWAE+ K
Sbjct: 573 FTVAYTPQQNGVAERMNRTLTERIRAMLRTAGL-PNSFWAEAAK 615


>emb|CAN69340.1| hypothetical protein VITISV_032634 [Vitis vinifera]
          Length = 1298

 Score = 47.4 bits (111), Expect(2) = 3e-08
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
 Frame = -1

Query: 381 YFMKEKSEVFAKFE-----VENQMRRKIKYLRSDNGSKYKDGKFLKFC 253
           YF+K KS+VF  F+     VE +   K+K LRSDNG +Y DG F ++C
Sbjct: 508 YFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGEYIDGGFSEYC 555



 Score = 36.2 bits (82), Expect(2) = 3e-08
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -3

Query: 226 TVKKNLRQNEAVERINRTFMERERCMGLHA---EPFWAESI 113
           T+    +QN   ER+NRT  ER R M LHA   + FWA+++
Sbjct: 565 TIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAV 605


>emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]
          Length = 1286

 Score = 47.4 bits (111), Expect(2) = 3e-08
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
 Frame = -1

Query: 381 YFMKEKSEVFAKFE-----VENQMRRKIKYLRSDNGSKYKDGKFLKFC 253
           YF+K KS+VF  F+     VE +   K+K LRSDNG +Y DG F ++C
Sbjct: 496 YFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGEYIDGGFSEYC 543



 Score = 36.2 bits (82), Expect(2) = 3e-08
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -3

Query: 226 TVKKNLRQNEAVERINRTFMERERCMGLHA---EPFWAESI 113
           T+    +QN   ER+NRT  ER R M LHA   + FWA+++
Sbjct: 553 TIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAV 593


>emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]
          Length = 1279

 Score = 47.4 bits (111), Expect(2) = 3e-08
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
 Frame = -1

Query: 381 YFMKEKSEVFAKFE-----VENQMRRKIKYLRSDNGSKYKDGKFLKFC 253
           YF+K KS+VF  F+     VE +   K+K LRSDNG +Y DG F ++C
Sbjct: 489 YFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGEYIDGGFSEYC 536



 Score = 36.2 bits (82), Expect(2) = 3e-08
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -3

Query: 226 TVKKNLRQNEAVERINRTFMERERCMGLHA---EPFWAESI 113
           T+    +QN   ER+NRT  ER R M LHA   + FWA+++
Sbjct: 546 TIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAV 586


>emb|CAN62181.1| hypothetical protein VITISV_044399 [Vitis vinifera]
          Length = 1264

 Score = 47.4 bits (111), Expect(2) = 3e-08
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
 Frame = -1

Query: 381 YFMKEKSEVFAKFE-----VENQMRRKIKYLRSDNGSKYKDGKFLKFC 253
           YF+K KS+VF  F+     VE +   K+K LRSDNG +Y DG F ++C
Sbjct: 508 YFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGEYIDGGFSEYC 555



 Score = 36.2 bits (82), Expect(2) = 3e-08
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -3

Query: 226 TVKKNLRQNEAVERINRTFMERERCMGLHA---EPFWAESI 113
           T+    +QN   ER+NRT  ER R M LHA   + FWA+++
Sbjct: 565 TIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAV 605


>emb|CAN74198.1| hypothetical protein VITISV_005765 [Vitis vinifera]
          Length = 1261

 Score = 47.4 bits (111), Expect(2) = 3e-08
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
 Frame = -1

Query: 381 YFMKEKSEVFAKFE-----VENQMRRKIKYLRSDNGSKYKDGKFLKFC 253
           YF+K KS+VF  F+     VE +   K+K LRSDNG +Y DG F ++C
Sbjct: 471 YFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGEYIDGGFSEYC 518



 Score = 36.2 bits (82), Expect(2) = 3e-08
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -3

Query: 226 TVKKNLRQNEAVERINRTFMERERCMGLHA---EPFWAESI 113
           T+    +QN   ER+NRT  ER R M LHA   + FWA+++
Sbjct: 528 TIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAV 568


>emb|CAN71109.1| hypothetical protein VITISV_001479 [Vitis vinifera]
          Length = 1246

 Score = 47.4 bits (111), Expect(2) = 3e-08
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
 Frame = -1

Query: 381 YFMKEKSEVFAKFE-----VENQMRRKIKYLRSDNGSKYKDGKFLKFC 253
           YF+K KS+VF  F+     VE +   K+K LRSDNG +Y DG F ++C
Sbjct: 480 YFLKNKSDVFVTFKKWKXMVETETGLKVKCLRSDNGGEYIDGGFSEYC 527



 Score = 36.2 bits (82), Expect(2) = 3e-08
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -3

Query: 226 TVKKNLRQNEAVERINRTFMERERCMGLHA---EPFWAESI 113
           T+    +QN   ER+NRT  ER R M LHA   + FWA+++
Sbjct: 537 TIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAV 577


>emb|CAN76896.1| hypothetical protein VITISV_010605 [Vitis vinifera]
          Length = 1146

 Score = 47.4 bits (111), Expect(2) = 3e-08
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
 Frame = -1

Query: 381 YFMKEKSEVFAKFE-----VENQMRRKIKYLRSDNGSKYKDGKFLKFC 253
           YF+K KS+VF  F+     VE +   K+K LRSDNG +Y DG F ++C
Sbjct: 477 YFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGEYIDGGFSEYC 524



 Score = 36.2 bits (82), Expect(2) = 3e-08
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -3

Query: 226 TVKKNLRQNEAVERINRTFMERERCMGLHA---EPFWAESI 113
           T+    +QN   ER+NRT  ER R M LHA   + FWA+++
Sbjct: 534 TIXGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAV 574


>dbj|BAA96887.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1140

 Score = 47.8 bits (112), Expect(2) = 3e-08
 Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
 Frame = -1

Query: 378 FMKEKSEVFAKF-----EVENQMRRKIKYLRSDNGSKYKDGKFLKFCKENAL 238
           F+K K E F KF      VENQ+ +KIK LR+DNG ++ + KF ++CK+N +
Sbjct: 511 FLKTKDETFDKFCEWKELVENQVNKKIKVLRTDNGLEFCNLKFDEYCKKNGI 562



 Score = 35.8 bits (81), Expect(2) = 3e-08
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
 Frame = -3

Query: 262 EVLQRKCIT*HFTVKKNLRQNEAVERINRTFMERERCM----GLHAEPFWAES 116
           E  ++  I  H T     +QN   ER+NRT ME+ RC+    GL  E FWAE+
Sbjct: 555 EYCKKNGIERHRTCTYTPQQNGVAERMNRTLMEKVRCLLNESGLD-ESFWAEA 606


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