BLASTX nr result

ID: Akebia24_contig00042955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00042955
         (261 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]    57   1e-07
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...    45   2e-07
emb|CAN82859.1| hypothetical protein VITISV_025377 [Vitis vinifera]    56   5e-07
dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica G...    40   6e-07
gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japo...    40   6e-07
emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]    50   1e-06
emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera]    50   1e-06
emb|CAN64418.1| hypothetical protein VITISV_030041 [Vitis vinifera]    51   3e-06
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc...    39   3e-06
ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266...    45   6e-06

>emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]
          Length = 590

 Score = 56.6 bits (135), Expect(2) = 1e-07
 Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
 Frame = -3

Query: 259 KILLQGPTKDGVYVFPSS---SPQAHVHERVTPSQWHLRLKHPSMQLVHKIIS 110
           +ILLQGP ++GVY  PSS   +P A VHER + + WH RL HPS ++V ++IS
Sbjct: 396 EILLQGPCENGVYPMPSSPAATPIAFVHERTSVTGWHQRLGHPSFKVVTRLIS 448



 Score = 24.6 bits (52), Expect(2) = 1e-07
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 116 NLPSALPITQSNSSGLCSSCCKAKLHQLPY 27
           +LP+   ++ SN+   C SC   K HQLP+
Sbjct: 451 SLPTTSCLSGSNN---CHSCSINKAHQLPF 477


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score = 45.1 bits (105), Expect(2) = 2e-07
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
 Frame = -3

Query: 256  ILLQGPTKDGVYVFPSSS----PQAHVHERVTPSQWHLRLKHPSMQLVHKIIS 110
            +LL+GP ++G+Y  P+SS     Q     + T S+WH RL HPS+ +V K++S
Sbjct: 1381 LLLRGPCRNGLYPLPTSSLATSKQVLGAIKPTMSRWHSRLGHPSLAIVQKVVS 1433



 Score = 35.4 bits (80), Expect(2) = 2e-07
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = -2

Query: 125  AQNNLPSALPITQSNSSGLCSSCCKAKLHQLPY 27
            + NNLP    +   N SG+C++C +AK HQLPY
Sbjct: 1433 SSNNLPC---LGDVNESGVCNACQQAKSHQLPY 1462


>emb|CAN82859.1| hypothetical protein VITISV_025377 [Vitis vinifera]
          Length = 1578

 Score = 55.8 bits (133), Expect(2) = 5e-07
 Identities = 28/54 (51%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
 Frame = -3

Query: 256 ILLQGPTKDGVYVFPSSSPQ------AHVHERVTPSQWHLRLKHPSMQLVHKII 113
           ILL+G  +DGVY FP   P       A+VHER TP  WH RL HPS +LV+ +I
Sbjct: 361 ILLKGKCEDGVYPFPKHLPPNSKNVVAYVHERTTPDGWHKRLGHPSSKLVNHLI 414



 Score = 23.5 bits (49), Expect(2) = 5e-07
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 104 ALPITQSNSSGLCSSCCKAKLHQLPYGCSTH 12
           +LP  ++    LC+SC + K H+  +  +TH
Sbjct: 418 SLPTNKNGHLSLCTSCSQNKAHRQTF--NTH 446


>dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 572

 Score = 40.4 bits (93), Expect(2) = 6e-07
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = -3

Query: 259 KILLQGPTKDGVYVFPS-SSPQAHVHERVTPSQWHLRLKHPSMQLVHKIIS 110
           K+L QG  + G+Y   S  + Q     +++PSQWH RL HPS  +V +++S
Sbjct: 367 KLLHQGRCERGLYPLKSFPNKQVFAAIKLSPSQWHCRLGHPSSVIVQQVLS 417



 Score = 38.5 bits (88), Expect(2) = 6e-07
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = -2

Query: 125 AQNNLPSALPITQSNSSGLCSSCCKAKLHQLPYGCSTHRS 6
           + NNLP    +++SN   +C +C K K HQLPY  S  RS
Sbjct: 417 SHNNLPC---VSESNKHSVCDACQKGKSHQLPYSKSLSRS 453


>gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
          Length = 499

 Score = 40.4 bits (93), Expect(2) = 6e-07
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = -3

Query: 259 KILLQGPTKDGVYVFPS-SSPQAHVHERVTPSQWHLRLKHPSMQLVHKIIS 110
           K+L QG  + G+Y   S  + Q     +++PSQWH RL HPS  +V +++S
Sbjct: 294 KLLHQGRCERGLYPLKSFPNKQVFAAIKLSPSQWHCRLGHPSSVIVQQVLS 344



 Score = 38.5 bits (88), Expect(2) = 6e-07
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = -2

Query: 125 AQNNLPSALPITQSNSSGLCSSCCKAKLHQLPYGCSTHRS 6
           + NNLP    +++SN   +C +C K K HQLPY  S  RS
Sbjct: 344 SHNNLPC---VSESNKHSVCDACQKGKSHQLPYSKSLSRS 380


>emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]
          Length = 1144

 Score = 50.1 bits (118), Expect(2) = 1e-06
 Identities = 24/56 (42%), Positives = 40/56 (71%), Gaps = 7/56 (12%)
 Frame = -3

Query: 256 ILLQGPTKDGVYVFPSS-----SPQ--AHVHERVTPSQWHLRLKHPSMQLVHKIIS 110
           ILL+G  ++GVY+FP+S     +P+  A+VHER + + WH RL HPS+++V  +++
Sbjct: 377 ILLRGACENGVYIFPNSMMAPSTPKMVAYVHERTSINGWHKRLGHPSIKVVQNLVN 432



 Score = 28.1 bits (61), Expect(2) = 1e-06
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 104 ALPITQSNSSGLCSSCCKAKLHQLPYGCSTHRS 6
           +LP+T +     C SC   K HQ P+G ++ +S
Sbjct: 435 SLPLTTNKLPLSCPSCSINKAHQQPFGSTSFQS 467


>emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera]
          Length = 1044

 Score = 49.7 bits (117), Expect(2) = 1e-06
 Identities = 24/56 (42%), Positives = 39/56 (69%), Gaps = 7/56 (12%)
 Frame = -3

Query: 256 ILLQGPTKDGVYVFPSS-----SPQ--AHVHERVTPSQWHLRLKHPSMQLVHKIIS 110
           ILL+G  ++GVY+FP+S     +P+  A+VHER +   WH RL HPS+++V  +++
Sbjct: 253 ILLRGACENGVYIFPNSMVAPSTPKMVAYVHERTSIDGWHKRLGHPSIKVVQNLVN 308



 Score = 28.1 bits (61), Expect(2) = 1e-06
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 104 ALPITQSNSSGLCSSCCKAKLHQLPYGCSTHRS 6
           +LP+T +     C SC   K HQ P+G ++ +S
Sbjct: 311 SLPLTTNKLPLSCPSCSINKAHQQPFGSTSFQS 343


>emb|CAN64418.1| hypothetical protein VITISV_030041 [Vitis vinifera]
          Length = 1429

 Score = 51.2 bits (121), Expect(2) = 3e-06
 Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
 Frame = -3

Query: 259 KILLQGPTKDGVYVF---PSSSPQAHVHERVTPSQWHLRLKHPSMQLVHKIIS 110
           +ILLQGP ++GVY     P+++P A VHER +   WH RL H S ++V ++IS
Sbjct: 288 EILLQGPCENGVYPLASSPAATPIAFVHERTSAXGWHXRLGHRSFKVVXRLIS 340



 Score = 25.4 bits (54), Expect(2) = 3e-06
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 116 NLPSALPITQSNSSGLCSSCCKAKLHQLPY 27
           +LP+   ++ SN+   C SC   K HQLP+
Sbjct: 343 SLPTTSCLSGSNN---CHSCSXNKAHQLPF 369


>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 807

 Score = 39.3 bits (90), Expect(2) = 3e-06
 Identities = 16/50 (32%), Positives = 30/50 (60%)
 Frame = -3

Query: 256 ILLQGPTKDGVYVFPSSSPQAHVHERVTPSQWHLRLKHPSMQLVHKIISQ 107
           I+L+G  + G+Y FPS   +       + ++WH RL HP+  +V ++++Q
Sbjct: 391 IILKGRCRKGLYPFPSEDAKYVCSVAPSFARWHSRLSHPTTPIVSRVVNQ 440



 Score = 37.4 bits (85), Expect(2) = 3e-06
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -2

Query: 101 LPITQSNSSGLCSSCCKAKLHQLPYGCST 15
           LP  +S+S  +C +C KAK HQLPY  ST
Sbjct: 443 LPCQKSHSESVCDACQKAKSHQLPYSRST 471


>ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266915 [Solanum
           lycopersicum]
          Length = 544

 Score = 44.7 bits (104), Expect(2) = 6e-06
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
 Frame = -3

Query: 259 KILLQGPTKDGVY--------VFPSSSPQAHVHERVTPSQWHLRLKHPSMQLVHKIIS 110
           KILL+G   DG+Y        V  SS+P+A V  R +   WH RL HP  QL+ +++S
Sbjct: 441 KILLRGSIDDGLYRFDGGGLPVISSSTPRAFVISRASLQAWHERLGHPHEQLLRRLVS 498



 Score = 30.8 bits (68), Expect(2) = 6e-06
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -2

Query: 101 LPITQSNSSGLCSSCCKAKLHQLPYGCSTHRS 6
           LP+T +    +C SC   K H++P   S+ RS
Sbjct: 502 LPVTSNKMPAVCGSCQLGKSHRIPLASSSSRS 533


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