BLASTX nr result

ID: Akebia24_contig00042891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00042891
         (215 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...    61   3e-08
gb|AAG50898.1|AC068901_7 hypothetical protein [Arabidopsis thali...    56   5e-06
emb|CAN67251.1| hypothetical protein VITISV_026553 [Vitis vinifera]    56   5e-06
gb|AAK38382.1|AC079028_6 hypothetical protein [Arabidopsis thali...    56   5e-06
gb|AAD22505.1| putative retroelement gag/pol polyprotein [Arabid...    55   5e-06
ref|XP_007219931.1| hypothetical protein PRUPE_ppb018256mg [Prun...    56   6e-06
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]              55   8e-06
emb|CAN73244.1| hypothetical protein VITISV_005389 [Vitis vinifera]    54   8e-06

>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score = 61.2 bits (147), Expect(2) = 3e-08
 Identities = 26/53 (49%), Positives = 42/53 (79%)
 Frame = +2

Query: 2    ALIRLESYHQRLQNYFNKRVRHRQFKDEDLVLRRVFQNTEEQNSGKLGPNGKG 160
            AL+R+++Y Q    ++NK+V++R F + DLVLR+VF+NT EQ++GKLG + +G
Sbjct: 1698 ALLRIQNYQQAAAKFYNKKVKNRLFAEGDLVLRKVFENTVEQDAGKLGAHWEG 1750



 Score = 21.9 bits (45), Expect(2) = 3e-08
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 136  KIRS*WEGPYRIXXXXXXXXXXLVTM 213
            K+ + WEGPY I          L+TM
Sbjct: 1743 KLGAHWEGPYLISKVVKPGVYELLTM 1768


>gb|AAG50898.1|AC068901_7 hypothetical protein [Arabidopsis thaliana]
          Length = 243

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/50 (48%), Positives = 37/50 (74%)
 Frame = +2

Query: 2   ALIRLESYHQRLQNYFNKRVRHRQFKDEDLVLRRVFQNTEEQNSGKLGPN 151
           A+IR+++Y Q +  Y+N  ++ R+F+  +LVLR+VF NT E N+GKLG N
Sbjct: 194 AMIRVQNYQQAVTRYYNSNIKIRRFEVGELVLRKVFSNTRELNAGKLGTN 243


>emb|CAN67251.1| hypothetical protein VITISV_026553 [Vitis vinifera]
          Length = 931

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/53 (47%), Positives = 36/53 (67%)
 Frame = +2

Query: 2    ALIRLESYHQRLQNYFNKRVRHRQFKDEDLVLRRVFQNTEEQNSGKLGPNGKG 160
            A IR+  Y Q    ++N++VRHR FK+  LVLR+VF+NT E+ +GK   N +G
Sbjct: 842  AAIRMADYQQMASAHYNRKVRHRSFKNGTLVLRKVFENTTERGTGKFQANWEG 894


>gb|AAK38382.1|AC079028_6 hypothetical protein [Arabidopsis thaliana]
          Length = 257

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/50 (48%), Positives = 37/50 (74%)
 Frame = +2

Query: 2   ALIRLESYHQRLQNYFNKRVRHRQFKDEDLVLRRVFQNTEEQNSGKLGPN 151
           A+IR+++Y Q +  Y+N  ++ R+F+  +LVLR+VF NT E N+GKLG N
Sbjct: 208 AMIRVQNYQQAVTRYYNSNIKIRRFEVGELVLRKVFSNTRELNAGKLGTN 257


>gb|AAD22505.1| putative retroelement gag/pol polyprotein [Arabidopsis thaliana]
          Length = 1212

 Score = 55.1 bits (131), Expect(2) = 5e-06
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = +2

Query: 2    ALIRLESYHQRLQNYFNKRVRHRQFKDEDLVLRRVFQNTEEQNSGKLGPNGKG 160
            AL+R+++YH     Y+N  VR R F    LVLRR+ QNT E+ +GKLG + +G
Sbjct: 1124 ALVRMQNYHNAAAQYYNSNVRSRSFDVGTLVLRRIHQNTAEKGAGKLGISWEG 1176



 Score = 20.8 bits (42), Expect(2) = 5e-06
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +1

Query: 151  WEGPYRI 171
            WEGPY+I
Sbjct: 1174 WEGPYKI 1180


>ref|XP_007219931.1| hypothetical protein PRUPE_ppb018256mg [Prunus persica]
           gi|462416393|gb|EMJ21130.1| hypothetical protein
           PRUPE_ppb018256mg [Prunus persica]
          Length = 217

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/53 (47%), Positives = 38/53 (71%)
 Frame = +2

Query: 2   ALIRLESYHQRLQNYFNKRVRHRQFKDEDLVLRRVFQNTEEQNSGKLGPNGKG 160
           A +RL +YH  + NYFNK++  R+FK  + VLRRV +NT++ N+GK G + +G
Sbjct: 138 ATLRLANYHNLVANYFNKQIHPRRFKLGEWVLRRVMENTKDLNAGKFGLSWEG 190


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/53 (49%), Positives = 36/53 (67%)
 Frame = +2

Query: 2    ALIRLESYHQRLQNYFNKRVRHRQFKDEDLVLRRVFQNTEEQNSGKLGPNGKG 160
            ALIR+++Y Q    Y+N +V+ R F   D VLRRVF N +E+ +GKLG N +G
Sbjct: 1014 ALIRIQNYQQAAARYYNSKVKSRPFFVGDYVLRRVFDNKKEEGAGKLGINWEG 1066


>emb|CAN73244.1| hypothetical protein VITISV_005389 [Vitis vinifera]
          Length = 874

 Score = 53.9 bits (128), Expect(2) = 8e-06
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = +2

Query: 2   ALIRLESYHQRLQNYFNKRVRHRQFKDEDLVLRRVFQNTEEQNSGKLGPNGKG 160
           A IR+  Y QR   ++N++VR R FK+  LVLR+VF+NT E  +GK   N +G
Sbjct: 785 AAIRMADYQQRASAHYNRKVRPRSFKNGTLVLRKVFENTAETGAGKFRANWEG 837



 Score = 21.2 bits (43), Expect(2) = 8e-06
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 136 KIRS*WEGPY 165
           K R+ WEGPY
Sbjct: 830 KFRANWEGPY 839


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