BLASTX nr result

ID: Akebia24_contig00042589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00042589
         (567 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007048683.1| DNA/RNA polymerases superfamily protein [The...    97   2e-33
ref|XP_007019612.1| Uncharacterized protein TCM_035725 [Theobrom...    98   3e-33
ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [The...    94   3e-32
ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [The...    96   4e-32
ref|XP_004140807.1| PREDICTED: uncharacterized protein LOC101203...   101   6e-32
ref|XP_007037024.1| Uncharacterized protein TCM_013224 [Theobrom...    94   1e-31
ref|XP_007213052.1| hypothetical protein PRUPE_ppa020415mg, part...    96   5e-31
ref|XP_007010495.1| Uncharacterized protein TCM_044370 [Theobrom...    94   8e-31
gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprot...    99   2e-30
ref|XP_007202926.1| hypothetical protein PRUPE_ppa016266mg, part...    83   5e-30
ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624...   103   2e-28
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 100   3e-28
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...    98   6e-28
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...    98   6e-28
gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]        98   6e-28
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   100   8e-28
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]       100   1e-27
emb|CAN68662.1| hypothetical protein VITISV_004407 [Vitis vinifera]    86   1e-27
emb|CAN72135.1| hypothetical protein VITISV_017100 [Vitis vinifera]    95   1e-27
gb|AAS49090.1| At2g06190 [Arabidopsis thaliana]                        99   1e-27

>ref|XP_007048683.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
           gi|508700944|gb|EOX92840.1| DNA/RNA polymerases
           superfamily protein [Theobroma cacao]
          Length = 647

 Score = 97.4 bits (241), Expect(2) = 2e-33
 Identities = 47/69 (68%), Positives = 52/69 (75%)
 Frame = -3

Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
           FI C KTSDAT+IA LFF EVVRLHGIP +I  DR  KF+ HFW TLWR   T L ++S 
Sbjct: 390 FIPCFKTSDATHIAELFFCEVVRLHGIPTSIVSDRDVKFMGHFWRTLWRKFGTELKYSST 449

Query: 385 CHPQTDGQT 359
           CHPQTDGQT
Sbjct: 450 CHPQTDGQT 458



 Score = 71.2 bits (173), Expect(2) = 2e-33
 Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
 Frame = -1

Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTHTHWI* 181
           +VN +LGN+L+ L    PK W L + Q EFAYNN V+ S +K P E+ Y   P H   + 
Sbjct: 460 VVNRSLGNMLRCLIQNNPKTWDLVIPQAEFAYNNSVNRSIKKTPFEVAYGLKPQHVLDLV 519

Query: 180 FHYQSYLV-----*ALLQITWLKR*LQSCL-MQKSSWRNTINKHRRVKVFKENDMVMVHI 19
              Q   V          I  +   +++ L    + +  T N+HRR + F+E D V+VH+
Sbjct: 520 PLPQEARVSNEGELFAYHIRKIHEEVKAALKASNAEYSFTANQHRRKQEFEEGDQVLVHL 579

Query: 18  HKERFP 1
            +ERFP
Sbjct: 580 RQERFP 585


>ref|XP_007019612.1| Uncharacterized protein TCM_035725 [Theobroma cacao]
           gi|508724940|gb|EOY16837.1| Uncharacterized protein
           TCM_035725 [Theobroma cacao]
          Length = 499

 Score = 97.8 bits (242), Expect(2) = 3e-33
 Identities = 45/69 (65%), Positives = 53/69 (76%)
 Frame = -3

Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
           FI C +TSDAT+IA LFF+E+VRLHGIP +I  DR  KF+ HFW TLWR   T L ++S 
Sbjct: 169 FIPCFRTSDATHIAELFFREIVRLHGIPTSIVSDRDVKFMGHFWRTLWRKFGTELKYSST 228

Query: 385 CHPQTDGQT 359
           CHPQTDGQT
Sbjct: 229 CHPQTDGQT 237



 Score = 70.1 bits (170), Expect(2) = 3e-33
 Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
 Frame = -1

Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTHTHWI* 181
           +VN +LGN+L+ L    PK W L + Q EFAYNN V+ S +K P E+ Y   P H   + 
Sbjct: 239 VVNRSLGNMLRCLIQNNPKTWDLVIPQAEFAYNNSVNRSIKKTPFEVAYGLKPQHVLDLV 298

Query: 180 FHYQSYLV-----*ALLQITWLKR*LQSCL-MQKSSWRNTINKHRRVKVFKENDMVMVHI 19
              Q   V          I  +   +++ L    + +  T N+HRR + F+E D V+VH+
Sbjct: 299 PLPQEARVSNEGELFADHIRKIHEEVKAALKASNAEYSFTANQHRRKQEFEEGDQVLVHL 358

Query: 18  HKERFP 1
            +ERFP
Sbjct: 359 RQERFP 364


>ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
            gi|508703673|gb|EOX95569.1| DNA/RNA polymerases
            superfamily protein [Theobroma cacao]
          Length = 1452

 Score = 94.4 bits (233), Expect(2) = 3e-32
 Identities = 43/69 (62%), Positives = 53/69 (76%)
 Frame = -3

Query: 565  FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
            FI C +TSDAT+IA LFF+E+V LHGIP +I  DR+ KF+ +FW TLWR   T L ++S 
Sbjct: 1122 FIPCFRTSDATHIAELFFREIVILHGIPTSIVSDRHVKFMGYFWRTLWRKFGTELKYSST 1181

Query: 385  CHPQTDGQT 359
            CHPQTDGQT
Sbjct: 1182 CHPQTDGQT 1190



 Score = 70.5 bits (171), Expect(2) = 3e-32
 Identities = 46/126 (36%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
 Frame = -1

Query: 360  LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTHTHWI* 181
            +VN +LGN+L+ L    PK W L + Q EFAYNN V+ S +K P E  Y   P H   + 
Sbjct: 1192 VVNRSLGNMLRCLIQNNPKTWDLVIPQAEFAYNNSVNRSIKKTPFEAAYGLKPQHVLDLV 1251

Query: 180  FHYQSYLV-----*ALLQITWLKR*LQSCL-MQKSSWRNTINKHRRVKVFKENDMVMVHI 19
               Q   V         QI  +   +++ L    + +  T N+HRR + F+E D V+VH+
Sbjct: 1252 PLPQEARVSNEGELFADQIRKIHEEVKAALKASNAEYSFTANQHRRKQEFEEGDQVLVHL 1311

Query: 18   HKERFP 1
             +ERFP
Sbjct: 1312 RQERFP 1317


>ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
           gi|508709261|gb|EOY01158.1| DNA/RNA polymerases
           superfamily protein [Theobroma cacao]
          Length = 786

 Score = 95.9 bits (237), Expect(2) = 4e-32
 Identities = 44/69 (63%), Positives = 53/69 (76%)
 Frame = -3

Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
           FI C +TS+AT+IA LFF+E+VRLHGIP +I  DR  KF+ HFW TLWR   T L ++S 
Sbjct: 574 FIPCFRTSNATHIAELFFREIVRLHGIPTSIVSDRDVKFMGHFWRTLWRKFGTELKYSST 633

Query: 385 CHPQTDGQT 359
           CHPQTDGQT
Sbjct: 634 CHPQTDGQT 642



 Score = 68.6 bits (166), Expect(2) = 4e-32
 Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
 Frame = -1

Query: 360  LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTHTHWI* 181
            +VN +LGN+L+ L    PK W L + Q EFAYNN V+ S +K P E  Y   P H   + 
Sbjct: 644  VVNRSLGNMLRCLIQNNPKTWDLVIPQAEFAYNNSVNRSIKKTPFEAAYGLKPQHVLDLV 703

Query: 180  FHYQSYLV-----*ALLQITWLKR*LQSCL-MQKSSWRNTINKHRRVKVFKENDMVMVHI 19
               Q   V          I  +   +++ L    + +  T N+HRR + F+E D V+VH+
Sbjct: 704  PLPQEARVSNEGELFADHIRKIHEEVKAALKASNAEYSFTANQHRRKQEFEEGDQVLVHL 763

Query: 18   HKERFP 1
             +ERFP
Sbjct: 764  RQERFP 769


>ref|XP_004140807.1| PREDICTED: uncharacterized protein LOC101203557 [Cucumis sativus]
          Length = 1406

 Score =  101 bits (252), Expect(2) = 6e-32
 Identities = 48/73 (65%), Positives = 56/73 (76%)
 Frame = -3

Query: 565  FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
            FI CKKT DA NIANLFF+E+VRLHGIPKTI  DR  KFL HFW +LW+  +T+L F++ 
Sbjct: 1222 FIPCKKTFDALNIANLFFREIVRLHGIPKTIVSDRDVKFLSHFWRSLWKKFDTNLLFSTA 1281

Query: 385  CHPQTDGQTGKPN 347
             HPQTDGQT   N
Sbjct: 1282 SHPQTDGQTEVTN 1294



 Score = 62.0 bits (149), Expect(2) = 6e-32
 Identities = 29/56 (51%), Positives = 39/56 (69%)
 Frame = -1

Query: 360  LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTHT 193
            + N TLGN+++ LS +KPKQW LAL Q EF +N++ + ST K P E+VY  LP  T
Sbjct: 1292 VTNRTLGNLIRCLSGDKPKQWDLALPQAEFTFNHMENRSTGKSPFEVVYTSLPRVT 1347


>ref|XP_007037024.1| Uncharacterized protein TCM_013224 [Theobroma cacao]
           gi|508774269|gb|EOY21525.1| Uncharacterized protein
           TCM_013224 [Theobroma cacao]
          Length = 412

 Score = 94.0 bits (232), Expect(2) = 1e-31
 Identities = 44/69 (63%), Positives = 52/69 (75%)
 Frame = -3

Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
           FI C +T DAT+IA LFF+EVVRLHGIP +I  +R  KF+ HFW TLWR   T L ++S 
Sbjct: 82  FIPCFRTFDATHIAELFFREVVRLHGIPTSIVSNRDVKFMGHFWKTLWRKFGTELKYSST 141

Query: 385 CHPQTDGQT 359
           CHPQTDGQT
Sbjct: 142 CHPQTDGQT 150



 Score = 68.6 bits (166), Expect(2) = 1e-31
 Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
 Frame = -1

Query: 363 RLVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTHTHWI 184
           ++VN +LGN+L+ L    PK W L + Q EFAYNN V+ S +K P E  Y   P H   +
Sbjct: 151 KVVNRSLGNMLRYLIQNNPKTWDLVIPQAEFAYNNSVNRSIKKTPFEAAYGLKPQHVLDL 210

Query: 183 *FHYQSYLV*ALLQ-----ITWLKR*LQSCL-MQKSSWRNTINKHRRVKVFKENDMVMVH 22
               Q   V    +     I  +   +++ L    + +  T N+HRR + F E D V+VH
Sbjct: 211 VPLPQEARVSNKGELFADHIRKIHEEVKAALKASNAEYSFTANQHRRKQEFDEGDQVLVH 270

Query: 21  IHKERFP 1
           + +ERFP
Sbjct: 271 LRQERFP 277


>ref|XP_007213052.1| hypothetical protein PRUPE_ppa020415mg, partial [Prunus persica]
           gi|462408917|gb|EMJ14251.1| hypothetical protein
           PRUPE_ppa020415mg, partial [Prunus persica]
          Length = 840

 Score = 96.3 bits (238), Expect(2) = 5e-31
 Identities = 45/70 (64%), Positives = 52/70 (74%)
 Frame = -3

Query: 556 CKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSMCHP 377
           CKKT+D +NIA LFF+EVVRLHG+P +IT DR  KFL HFW TLWR   T+L  +S  HP
Sbjct: 678 CKKTADISNIAKLFFREVVRLHGVPTSITSDRDTKFLSHFWITLWRMFGTTLNRSSTAHP 737

Query: 376 QTDGQTGKPN 347
           QTDGQT   N
Sbjct: 738 QTDGQTEVTN 747



 Score = 64.3 bits (155), Expect(2) = 5e-31
 Identities = 43/120 (35%), Positives = 54/120 (45%)
 Frame = -1

Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTHTHWI* 181
           + N TLGN+++S+  EKPKQW  AL QVEFAYN+ V  +              T +H   
Sbjct: 745 VTNRTLGNMVRSICGEKPKQWDYALPQVEFAYNSAVHSA--------------TGSHHFP 790

Query: 180 FHYQSYLV*ALLQITWLKR*LQSCLMQKSSWRNTINKHRRVKVFKENDMVMVHIHKERFP 1
           F                                  NKHRRVKVF+E D VMV + +ERFP
Sbjct: 791 FR--------------------------------CNKHRRVKVFQEGDYVMVFLREERFP 818


>ref|XP_007010495.1| Uncharacterized protein TCM_044370 [Theobroma cacao]
            gi|508727408|gb|EOY19305.1| Uncharacterized protein
            TCM_044370 [Theobroma cacao]
          Length = 1306

 Score = 94.0 bits (232), Expect(2) = 8e-31
 Identities = 45/69 (65%), Positives = 51/69 (73%)
 Frame = -3

Query: 565  FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
            FI C +TSDAT+IA LFF EVVRLHGIP +I  DR  KF+ HFW TLWR   T L ++S 
Sbjct: 1018 FIPCFRTSDATHIAELFFCEVVRLHGIPTSIVSDRDVKFMGHFWRTLWRKFGTELKYSST 1077

Query: 385  CHPQTDGQT 359
            CHPQTD QT
Sbjct: 1078 CHPQTDSQT 1086



 Score = 65.9 bits (159), Expect(2) = 8e-31
 Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 6/126 (4%)
 Frame = -1

Query: 360  LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTHTHWI* 181
            +VN +LGNIL+ L    PK W L   Q EFAYNN V+ S +K P E  Y   P H   + 
Sbjct: 1088 VVNRSLGNILRCLIQNNPKTWDLVKPQAEFAYNNSVNRSIKKTPFEAAYGLKPQHVLDLV 1147

Query: 180  FHYQSYLV-----*ALLQITWLKR*LQSCL-MQKSSWRNTINKHRRVKVFKENDMVMVHI 19
               Q   V          I  +   +++ L    + +  T N+HRR + F+E D V+V++
Sbjct: 1148 PLPQEARVSNEGELFADHIQKIHEEVKAALKASNAEYSFTANQHRRKQEFEEGDQVLVYL 1207

Query: 18   HKERFP 1
             +ERFP
Sbjct: 1208 RQERFP 1213


>gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
           thaliana]
          Length = 280

 Score = 99.0 bits (245), Expect(2) = 2e-30
 Identities = 48/73 (65%), Positives = 54/73 (73%)
 Frame = -3

Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
           FI CKKT+DA+NIA LFFKEVVRLHG+PK+IT DR  KFL HFW TLWR   T+L  +S 
Sbjct: 30  FIACKKTADASNIAKLFFKEVVRLHGVPKSITSDRDTKFLSHFWSTLWRMFGTALNRSST 89

Query: 385 CHPQTDGQTGKPN 347
            H Q DGQT   N
Sbjct: 90  PHTQIDGQTEVTN 102



 Score = 59.7 bits (143), Expect(2) = 2e-30
 Identities = 45/120 (37%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
 Frame = -1

Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVS-LSTRKLPSEIVYCRLPTHTHWI 184
           + N TLGN+++S+  + PKQW LAL Q+EFAYN+VV  +   KLP  +        T   
Sbjct: 100 VTNRTLGNMVRSICGDNPKQWDLALPQIEFAYNSVVHVVDLVKLPKAL---GASAETMAE 156

Query: 183 *FHYQSYLV*ALLQITWLKR*LQSCLMQKSSWRNTINKHRRVKVFKENDMVMVHIHKERF 4
                  +V A L+ T  K             +   +K RR KVFKE D VMV + K RF
Sbjct: 157 EILVVKEVVKAKLEATGKKN------------KVAADKRRRFKVFKEGDDVMVLLRKGRF 204


>ref|XP_007202926.1| hypothetical protein PRUPE_ppa016266mg, partial [Prunus persica]
           gi|462398457|gb|EMJ04125.1| hypothetical protein
           PRUPE_ppa016266mg, partial [Prunus persica]
          Length = 572

 Score = 82.8 bits (203), Expect(2) = 5e-30
 Identities = 42/68 (61%), Positives = 48/68 (70%)
 Frame = -3

Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
           FI CKKT +A+N+A LFFKEVV L G+PK+IT DR  KFL HF  TLWR   T L  NS+
Sbjct: 323 FIACKKTVNASNVAKLFFKEVVWLPGVPKSITSDRDTKFLSHFQITLWRMFVTDLNRNSI 382

Query: 385 CHPQTDGQ 362
            H Q DGQ
Sbjct: 383 AHLQMDGQ 390



 Score = 74.3 bits (181), Expect(2) = 5e-30
 Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
 Frame = -1

Query: 384 VIHRQM---VRLVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVY 214
           + H QM   +++ N TL ++++S+  ++PKQW +AL QVEFAYN+VV  S  K P   VY
Sbjct: 382 IAHLQMDGQIKVTNRTLRDMVRSICRDRPKQWDIALPQVEFAYNSVVHSSIGKSPFATVY 441

Query: 213 CRLPTHTHWI*FHYQSYLV*ALLQITWLKR*LQSCLMQKSSWRNTINKHRRVKVFKENDM 34
             +P H                         +    + ++   +  +KHR V++F+E D 
Sbjct: 442 TWVPRHV------------------------VDLVKLPRAHKTSPADKHRLVRLFQEEDS 477

Query: 33  VMVHIHKERFP 1
           VMV++ +ERFP
Sbjct: 478 VMVYLRRERFP 488


>ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624555 [Citrus sinensis]
          Length = 821

 Score =  103 bits (256), Expect(2) = 2e-28
 Identities = 47/69 (68%), Positives = 54/69 (78%)
 Frame = -3

Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
           FI C KT DAT+IANLFFKE+VRLHG+P++I  DR  KFL HFW TLW  L T L F++ 
Sbjct: 224 FIPCHKTDDATSIANLFFKEIVRLHGVPRSIVSDRDAKFLSHFWKTLWGKLGTKLLFSTT 283

Query: 385 CHPQTDGQT 359
           CHPQTDGQT
Sbjct: 284 CHPQTDGQT 292



 Score = 48.9 bits (115), Expect(2) = 2e-28
 Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
 Frame = -1

Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLP-THTHWI 184
           +VN TL  +L+++  +  K W   L  VEFAYN  V  +T+  P EIVY   P T    +
Sbjct: 294 VVNRTLSTLLRAIIQKNLKTWEECLPHVEFAYNRTVHSATKFSPFEIVYGFNPLTPLDLL 353

Query: 183 *FHY-QSYLV*ALLQITWLK----R*LQSCLMQKSSWRNTINKHRRVKVFKENDMVMVHI 19
                +   +    +  ++K    R  Q    +   +    NK R+  VF+  D V VH+
Sbjct: 354 PLPIDERASMDGKKKAEFVKQLHERTRQHIEKRTEQYATQANKGRKQVVFQPGDWVWVHM 413

Query: 18  HKERFP 1
            KERFP
Sbjct: 414 RKERFP 419


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  100 bits (248), Expect(2) = 3e-28
 Identities = 46/73 (63%), Positives = 56/73 (76%)
 Frame = -3

Query: 565  FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
            FI CKKT DAT++A L+FKEVV+LHGIPK+I  DR +KF+ HFW TLW+ L T L F++ 
Sbjct: 1184 FIACKKTEDATSVAELYFKEVVKLHGIPKSIVSDRDSKFMSHFWRTLWKLLKTRLLFSTS 1243

Query: 385  CHPQTDGQTGKPN 347
             HPQTDGQT   N
Sbjct: 1244 HHPQTDGQTEVTN 1256



 Score = 51.2 bits (121), Expect(2) = 3e-28
 Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
 Frame = -1

Query: 360  LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVY---CRLPTHTH 190
            + N TLG IL+   +   K W L LAQ EFA+N   S +T K P E+VY     +PT   
Sbjct: 1254 VTNKTLGRILRCTVARSLKDWDLKLAQAEFAFNRAPSTTTGKSPFEVVYGVNPMMPTDLA 1313

Query: 189  WI*FHYQSY----LV*ALLQI-TWLKR*LQSCLMQKSSWRNTINKHRRVKVFKENDMVMV 25
             I  +   Y     V  +L I   +K+ ++       + +      +  K F+  D+V +
Sbjct: 1314 PIKRNTIDYDAKKRVEQMLHIHEQVKKQIEKA---NEAHKGKSKGVKGTKSFEPGDLVWI 1370

Query: 24   HIHKERFP 1
            H+ KERFP
Sbjct: 1371 HLRKERFP 1378


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 98.2 bits (243), Expect(2) = 6e-28
 Identities = 45/69 (65%), Positives = 54/69 (78%)
 Frame = -3

Query: 565  FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
            FI CKKT+DA+++A+LF KEVV+LHGIP+TI  DR  KFL HFW  LW  L T L F++ 
Sbjct: 1251 FIPCKKTNDASHVADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTS 1310

Query: 385  CHPQTDGQT 359
            CHPQTDGQT
Sbjct: 1311 CHPQTDGQT 1319



 Score = 52.0 bits (123), Expect(2) = 6e-28
 Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
 Frame = -1

Query: 360  LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLP-THTHWI 184
            +VN TLGN+L+++   K   W   L  VEFAYN     ST K P E+VY   P T    +
Sbjct: 1321 VVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLL 1380

Query: 183  *FHYQSYL-V*ALLQITWLKR*LQSCLMQKSSWRNTI----NKHRRVKVFKENDMVMVHI 19
                  +  +    +   +K+  +   +        +    NK R+  +FK  D+V VH+
Sbjct: 1381 PLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHM 1440

Query: 18   HKERFP 1
             KERFP
Sbjct: 1441 RKERFP 1446


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 98.2 bits (243), Expect(2) = 6e-28
 Identities = 45/69 (65%), Positives = 54/69 (78%)
 Frame = -3

Query: 565  FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
            FI CKKT+DA+++A+LF KEVV+LHGIP+TI  DR  KFL HFW  LW  L T L F++ 
Sbjct: 1251 FIPCKKTNDASHVADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTS 1310

Query: 385  CHPQTDGQT 359
            CHPQTDGQT
Sbjct: 1311 CHPQTDGQT 1319



 Score = 52.0 bits (123), Expect(2) = 6e-28
 Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
 Frame = -1

Query: 360  LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLP-THTHWI 184
            +VN TLGN+L+++   K   W   L  VEFAYN     ST K P E+VY   P T    +
Sbjct: 1321 VVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLL 1380

Query: 183  *FHYQSYL-V*ALLQITWLKR*LQSCLMQKSSWRNTI----NKHRRVKVFKENDMVMVHI 19
                  +  +    +   +K+  +   +        +    NK R+  +FK  D+V VH+
Sbjct: 1381 PLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHM 1440

Query: 18   HKERFP 1
             KERFP
Sbjct: 1441 RKERFP 1446


>gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]
          Length = 1096

 Score = 98.2 bits (243), Expect(2) = 6e-28
 Identities = 45/69 (65%), Positives = 54/69 (78%)
 Frame = -3

Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
           FI CKKT+DA+++A+LF KEVV+LHGIP+TI  DR  KFL HFW  LW  L T L F++ 
Sbjct: 759 FIPCKKTNDASHVADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTS 818

Query: 385 CHPQTDGQT 359
           CHPQTDGQT
Sbjct: 819 CHPQTDGQT 827



 Score = 52.0 bits (123), Expect(2) = 6e-28
 Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
 Frame = -1

Query: 360  LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLP-THTHWI 184
            +VN TLGN+L+++   K   W   L  VEFAYN     ST K P E+VY   P T    +
Sbjct: 829  VVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLL 888

Query: 183  *FHYQSYL-V*ALLQITWLKR*LQSCLMQKSSWRNTI----NKHRRVKVFKENDMVMVHI 19
                  +  +    +   +K+  +   +        +    NK R+  +FK  D+V VH+
Sbjct: 889  PLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHM 948

Query: 18   HKERFP 1
             KERFP
Sbjct: 949  RKERFP 954


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  100 bits (249), Expect(2) = 8e-28
 Identities = 45/69 (65%), Positives = 53/69 (76%)
 Frame = -3

Query: 565  FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
            FI C KT DA++IA+LFF+E+VRLHG+P TI  DR  KFL HFW TLW  L T L F++ 
Sbjct: 1298 FIPCHKTDDASHIADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTT 1357

Query: 385  CHPQTDGQT 359
            CHPQTDGQT
Sbjct: 1358 CHPQTDGQT 1366



 Score = 49.3 bits (116), Expect(2) = 8e-28
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
 Frame = -1

Query: 360  LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLP------- 202
            +VN TL  +L+++  +  K W   L  +EFAYN  +  +T+  P +IVY  LP       
Sbjct: 1368 VVNRTLSTMLRAVLKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLM 1427

Query: 201  --THTHWI*FHYQSYLV*ALLQITWLKR*LQSCLMQKSSWRNTINKHRRVKVFKENDMVM 28
                +  + F  +     A L +   +   ++     + ++   +K RR   F+  D+V 
Sbjct: 1428 PLPSSEKLNFDAKQR---AELMLKLHETTKENIERMNAKYKFAGDKGRRELTFEPGDLVW 1484

Query: 27   VHIHKERFP 1
            +H+ KERFP
Sbjct: 1485 LHLRKERFP 1493



 Score = 69.7 bits (169), Expect(2) = 2e-13
 Identities = 34/73 (46%), Positives = 43/73 (58%)
 Frame = -3

Query: 565  FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
            FI  K T     +A L+F  +V LHG+PK I  DR ++F  HFW  L   L T L F++ 
Sbjct: 2120 FIPVKTTYGGNKLAELYFARIVSLHGVPKKIVSDRESQFTSHFWKKLQEELGTRLNFSTA 2179

Query: 385  CHPQTDGQTGKPN 347
             HPQTDGQT + N
Sbjct: 2180 YHPQTDGQTERLN 2192



 Score = 31.6 bits (70), Expect(2) = 2e-13
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = -1

Query: 357  VNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVY---CRLP 202
            +N  L ++L +   +  K W  +L   EF+YNN    S +  P E +Y   CR P
Sbjct: 2191 LNQILEDMLHACVLDFGKTWDKSLPYAEFSYNNSYQASIQMAPYEALYGRKCRTP 2245


>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
          Length = 1587

 Score =  100 bits (248), Expect(2) = 1e-27
 Identities = 44/69 (63%), Positives = 53/69 (76%)
 Frame = -3

Query: 565  FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
            FI C K+ DAT++A+LFF+E+VRLHG+P TI  DR  KFL HFW TLW  L T L F++ 
Sbjct: 1326 FIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTT 1385

Query: 385  CHPQTDGQT 359
            CHPQTDGQT
Sbjct: 1386 CHPQTDGQT 1394



 Score = 48.9 bits (115), Expect(2) = 1e-27
 Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 11/131 (8%)
 Frame = -1

Query: 360  LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLP------- 202
            +VN TL  +L+++  +  K W   L  VEFAYN     +T+K P EIVY  LP       
Sbjct: 1396 VVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLL 1455

Query: 201  --THTHWI*F--HYQSYLV*ALLQITWLKR*LQSCLMQKSSWRNTINKHRRVKVFKENDM 34
                +  + F   Y++ L+  L + T      ++       ++   +K ++   F+  D+
Sbjct: 1456 PLPTSERVNFDAKYRAELMLKLHETT-----KENIERMNIKYKLAGSKGKKHVAFEPGDL 1510

Query: 33   VMVHIHKERFP 1
            V +H+ K+RFP
Sbjct: 1511 VWLHLRKDRFP 1521


>emb|CAN68662.1| hypothetical protein VITISV_004407 [Vitis vinifera]
          Length = 605

 Score = 85.5 bits (210), Expect(2) = 1e-27
 Identities = 40/65 (61%), Positives = 49/65 (75%)
 Frame = -3

Query: 541 DATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSMCHPQTDGQ 362
           DA+ +ANLFF+E+VRLHGIP +IT DR  KFL HFW TLW+  +TSL ++S  HPQ DGQ
Sbjct: 438 DASYVANLFFREIVRLHGIPHSITSDRDVKFLSHFWRTLWKLFDTSLKYSSTSHPQIDGQ 497

Query: 361 TGKPN 347
           T   N
Sbjct: 498 TEVAN 502



 Score = 63.5 bits (153), Expect(2) = 1e-27
 Identities = 26/55 (47%), Positives = 41/55 (74%)
 Frame = -1

Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTH 196
           + N TL N+++S++ +KPKQW  AL Q+EFA+N++ + ST+K P E+VY  +P H
Sbjct: 500 VANRTLSNVIRSVNGDKPKQWGAALPQIEFAFNSMPNHSTKKTPFEVVYASVPRH 554


>emb|CAN72135.1| hypothetical protein VITISV_017100 [Vitis vinifera]
          Length = 587

 Score = 94.7 bits (234), Expect(2) = 1e-27
 Identities = 43/69 (62%), Positives = 54/69 (78%)
 Frame = -3

Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
           FI CKKT DA+NIANL+F+EVVRLHG+PK+IT D+ +KFL  FW TLW+   T L +++ 
Sbjct: 460 FICCKKTMDASNIANLYFREVVRLHGVPKSITSDQDSKFLSPFWRTLWKKFGTKLQYSTS 519

Query: 385 CHPQTDGQT 359
            HPQ DGQT
Sbjct: 520 YHPQMDGQT 528



 Score = 54.3 bits (129), Expect(2) = 1e-27
 Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
 Frame = -1

Query: 378 HRQM---VRLVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVY 214
           H QM     +VN +LG++L+ L  E PKQW   +AQ EFAYN   +L+T K P E+VY
Sbjct: 521 HPQMDGQTEVVNRSLGDLLRCLVGENPKQWEAVVAQAEFAYNYSKNLTTGKSPFEVVY 578


>gb|AAS49090.1| At2g06190 [Arabidopsis thaliana]
          Length = 148

 Score = 99.0 bits (245), Expect(2) = 1e-27
 Identities = 48/73 (65%), Positives = 54/73 (73%)
 Frame = -3

Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386
           FI CKKT+DA+NIA LFFKEVVRLHG+PK+IT DR  KFL HFW TLWR   T+L  +S 
Sbjct: 30  FIACKKTADASNIAKLFFKEVVRLHGVPKSITSDRDTKFLSHFWSTLWRMFGTALNRSST 89

Query: 385 CHPQTDGQTGKPN 347
            H Q DGQT   N
Sbjct: 90  PHTQIDGQTEVTN 102



 Score = 50.1 bits (118), Expect(2) = 1e-27
 Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
 Frame = -1

Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVS-LSTRKLPSEI 220
           + N TLGN+++S+  + PKQW LAL Q+EFAYN+VV  +   KLP  +
Sbjct: 100 VTNRTLGNMVRSICGDNPKQWDLALPQIEFAYNSVVHVVDLVKLPKAL 147


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