BLASTX nr result
ID: Akebia24_contig00042589
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia24_contig00042589 (567 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_007048683.1| DNA/RNA polymerases superfamily protein [The... 97 2e-33 ref|XP_007019612.1| Uncharacterized protein TCM_035725 [Theobrom... 98 3e-33 ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [The... 94 3e-32 ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [The... 96 4e-32 ref|XP_004140807.1| PREDICTED: uncharacterized protein LOC101203... 101 6e-32 ref|XP_007037024.1| Uncharacterized protein TCM_013224 [Theobrom... 94 1e-31 ref|XP_007213052.1| hypothetical protein PRUPE_ppa020415mg, part... 96 5e-31 ref|XP_007010495.1| Uncharacterized protein TCM_044370 [Theobrom... 94 8e-31 gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprot... 99 2e-30 ref|XP_007202926.1| hypothetical protein PRUPE_ppa016266mg, part... 83 5e-30 ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624... 103 2e-28 gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] 100 3e-28 gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 98 6e-28 gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 98 6e-28 gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum] 98 6e-28 gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 100 8e-28 dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 100 1e-27 emb|CAN68662.1| hypothetical protein VITISV_004407 [Vitis vinifera] 86 1e-27 emb|CAN72135.1| hypothetical protein VITISV_017100 [Vitis vinifera] 95 1e-27 gb|AAS49090.1| At2g06190 [Arabidopsis thaliana] 99 1e-27 >ref|XP_007048683.1| DNA/RNA polymerases superfamily protein [Theobroma cacao] gi|508700944|gb|EOX92840.1| DNA/RNA polymerases superfamily protein [Theobroma cacao] Length = 647 Score = 97.4 bits (241), Expect(2) = 2e-33 Identities = 47/69 (68%), Positives = 52/69 (75%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI C KTSDAT+IA LFF EVVRLHGIP +I DR KF+ HFW TLWR T L ++S Sbjct: 390 FIPCFKTSDATHIAELFFCEVVRLHGIPTSIVSDRDVKFMGHFWRTLWRKFGTELKYSST 449 Query: 385 CHPQTDGQT 359 CHPQTDGQT Sbjct: 450 CHPQTDGQT 458 Score = 71.2 bits (173), Expect(2) = 2e-33 Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 6/126 (4%) Frame = -1 Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTHTHWI* 181 +VN +LGN+L+ L PK W L + Q EFAYNN V+ S +K P E+ Y P H + Sbjct: 460 VVNRSLGNMLRCLIQNNPKTWDLVIPQAEFAYNNSVNRSIKKTPFEVAYGLKPQHVLDLV 519 Query: 180 FHYQSYLV-----*ALLQITWLKR*LQSCL-MQKSSWRNTINKHRRVKVFKENDMVMVHI 19 Q V I + +++ L + + T N+HRR + F+E D V+VH+ Sbjct: 520 PLPQEARVSNEGELFAYHIRKIHEEVKAALKASNAEYSFTANQHRRKQEFEEGDQVLVHL 579 Query: 18 HKERFP 1 +ERFP Sbjct: 580 RQERFP 585 >ref|XP_007019612.1| Uncharacterized protein TCM_035725 [Theobroma cacao] gi|508724940|gb|EOY16837.1| Uncharacterized protein TCM_035725 [Theobroma cacao] Length = 499 Score = 97.8 bits (242), Expect(2) = 3e-33 Identities = 45/69 (65%), Positives = 53/69 (76%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI C +TSDAT+IA LFF+E+VRLHGIP +I DR KF+ HFW TLWR T L ++S Sbjct: 169 FIPCFRTSDATHIAELFFREIVRLHGIPTSIVSDRDVKFMGHFWRTLWRKFGTELKYSST 228 Query: 385 CHPQTDGQT 359 CHPQTDGQT Sbjct: 229 CHPQTDGQT 237 Score = 70.1 bits (170), Expect(2) = 3e-33 Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 6/126 (4%) Frame = -1 Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTHTHWI* 181 +VN +LGN+L+ L PK W L + Q EFAYNN V+ S +K P E+ Y P H + Sbjct: 239 VVNRSLGNMLRCLIQNNPKTWDLVIPQAEFAYNNSVNRSIKKTPFEVAYGLKPQHVLDLV 298 Query: 180 FHYQSYLV-----*ALLQITWLKR*LQSCL-MQKSSWRNTINKHRRVKVFKENDMVMVHI 19 Q V I + +++ L + + T N+HRR + F+E D V+VH+ Sbjct: 299 PLPQEARVSNEGELFADHIRKIHEEVKAALKASNAEYSFTANQHRRKQEFEEGDQVLVHL 358 Query: 18 HKERFP 1 +ERFP Sbjct: 359 RQERFP 364 >ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [Theobroma cacao] gi|508703673|gb|EOX95569.1| DNA/RNA polymerases superfamily protein [Theobroma cacao] Length = 1452 Score = 94.4 bits (233), Expect(2) = 3e-32 Identities = 43/69 (62%), Positives = 53/69 (76%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI C +TSDAT+IA LFF+E+V LHGIP +I DR+ KF+ +FW TLWR T L ++S Sbjct: 1122 FIPCFRTSDATHIAELFFREIVILHGIPTSIVSDRHVKFMGYFWRTLWRKFGTELKYSST 1181 Query: 385 CHPQTDGQT 359 CHPQTDGQT Sbjct: 1182 CHPQTDGQT 1190 Score = 70.5 bits (171), Expect(2) = 3e-32 Identities = 46/126 (36%), Positives = 66/126 (52%), Gaps = 6/126 (4%) Frame = -1 Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTHTHWI* 181 +VN +LGN+L+ L PK W L + Q EFAYNN V+ S +K P E Y P H + Sbjct: 1192 VVNRSLGNMLRCLIQNNPKTWDLVIPQAEFAYNNSVNRSIKKTPFEAAYGLKPQHVLDLV 1251 Query: 180 FHYQSYLV-----*ALLQITWLKR*LQSCL-MQKSSWRNTINKHRRVKVFKENDMVMVHI 19 Q V QI + +++ L + + T N+HRR + F+E D V+VH+ Sbjct: 1252 PLPQEARVSNEGELFADQIRKIHEEVKAALKASNAEYSFTANQHRRKQEFEEGDQVLVHL 1311 Query: 18 HKERFP 1 +ERFP Sbjct: 1312 RQERFP 1317 >ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao] gi|508709261|gb|EOY01158.1| DNA/RNA polymerases superfamily protein [Theobroma cacao] Length = 786 Score = 95.9 bits (237), Expect(2) = 4e-32 Identities = 44/69 (63%), Positives = 53/69 (76%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI C +TS+AT+IA LFF+E+VRLHGIP +I DR KF+ HFW TLWR T L ++S Sbjct: 574 FIPCFRTSNATHIAELFFREIVRLHGIPTSIVSDRDVKFMGHFWRTLWRKFGTELKYSST 633 Query: 385 CHPQTDGQT 359 CHPQTDGQT Sbjct: 634 CHPQTDGQT 642 Score = 68.6 bits (166), Expect(2) = 4e-32 Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 6/126 (4%) Frame = -1 Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTHTHWI* 181 +VN +LGN+L+ L PK W L + Q EFAYNN V+ S +K P E Y P H + Sbjct: 644 VVNRSLGNMLRCLIQNNPKTWDLVIPQAEFAYNNSVNRSIKKTPFEAAYGLKPQHVLDLV 703 Query: 180 FHYQSYLV-----*ALLQITWLKR*LQSCL-MQKSSWRNTINKHRRVKVFKENDMVMVHI 19 Q V I + +++ L + + T N+HRR + F+E D V+VH+ Sbjct: 704 PLPQEARVSNEGELFADHIRKIHEEVKAALKASNAEYSFTANQHRRKQEFEEGDQVLVHL 763 Query: 18 HKERFP 1 +ERFP Sbjct: 764 RQERFP 769 >ref|XP_004140807.1| PREDICTED: uncharacterized protein LOC101203557 [Cucumis sativus] Length = 1406 Score = 101 bits (252), Expect(2) = 6e-32 Identities = 48/73 (65%), Positives = 56/73 (76%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI CKKT DA NIANLFF+E+VRLHGIPKTI DR KFL HFW +LW+ +T+L F++ Sbjct: 1222 FIPCKKTFDALNIANLFFREIVRLHGIPKTIVSDRDVKFLSHFWRSLWKKFDTNLLFSTA 1281 Query: 385 CHPQTDGQTGKPN 347 HPQTDGQT N Sbjct: 1282 SHPQTDGQTEVTN 1294 Score = 62.0 bits (149), Expect(2) = 6e-32 Identities = 29/56 (51%), Positives = 39/56 (69%) Frame = -1 Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTHT 193 + N TLGN+++ LS +KPKQW LAL Q EF +N++ + ST K P E+VY LP T Sbjct: 1292 VTNRTLGNLIRCLSGDKPKQWDLALPQAEFTFNHMENRSTGKSPFEVVYTSLPRVT 1347 >ref|XP_007037024.1| Uncharacterized protein TCM_013224 [Theobroma cacao] gi|508774269|gb|EOY21525.1| Uncharacterized protein TCM_013224 [Theobroma cacao] Length = 412 Score = 94.0 bits (232), Expect(2) = 1e-31 Identities = 44/69 (63%), Positives = 52/69 (75%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI C +T DAT+IA LFF+EVVRLHGIP +I +R KF+ HFW TLWR T L ++S Sbjct: 82 FIPCFRTFDATHIAELFFREVVRLHGIPTSIVSNRDVKFMGHFWKTLWRKFGTELKYSST 141 Query: 385 CHPQTDGQT 359 CHPQTDGQT Sbjct: 142 CHPQTDGQT 150 Score = 68.6 bits (166), Expect(2) = 1e-31 Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 6/127 (4%) Frame = -1 Query: 363 RLVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTHTHWI 184 ++VN +LGN+L+ L PK W L + Q EFAYNN V+ S +K P E Y P H + Sbjct: 151 KVVNRSLGNMLRYLIQNNPKTWDLVIPQAEFAYNNSVNRSIKKTPFEAAYGLKPQHVLDL 210 Query: 183 *FHYQSYLV*ALLQ-----ITWLKR*LQSCL-MQKSSWRNTINKHRRVKVFKENDMVMVH 22 Q V + I + +++ L + + T N+HRR + F E D V+VH Sbjct: 211 VPLPQEARVSNKGELFADHIRKIHEEVKAALKASNAEYSFTANQHRRKQEFDEGDQVLVH 270 Query: 21 IHKERFP 1 + +ERFP Sbjct: 271 LRQERFP 277 >ref|XP_007213052.1| hypothetical protein PRUPE_ppa020415mg, partial [Prunus persica] gi|462408917|gb|EMJ14251.1| hypothetical protein PRUPE_ppa020415mg, partial [Prunus persica] Length = 840 Score = 96.3 bits (238), Expect(2) = 5e-31 Identities = 45/70 (64%), Positives = 52/70 (74%) Frame = -3 Query: 556 CKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSMCHP 377 CKKT+D +NIA LFF+EVVRLHG+P +IT DR KFL HFW TLWR T+L +S HP Sbjct: 678 CKKTADISNIAKLFFREVVRLHGVPTSITSDRDTKFLSHFWITLWRMFGTTLNRSSTAHP 737 Query: 376 QTDGQTGKPN 347 QTDGQT N Sbjct: 738 QTDGQTEVTN 747 Score = 64.3 bits (155), Expect(2) = 5e-31 Identities = 43/120 (35%), Positives = 54/120 (45%) Frame = -1 Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTHTHWI* 181 + N TLGN+++S+ EKPKQW AL QVEFAYN+ V + T +H Sbjct: 745 VTNRTLGNMVRSICGEKPKQWDYALPQVEFAYNSAVHSA--------------TGSHHFP 790 Query: 180 FHYQSYLV*ALLQITWLKR*LQSCLMQKSSWRNTINKHRRVKVFKENDMVMVHIHKERFP 1 F NKHRRVKVF+E D VMV + +ERFP Sbjct: 791 FR--------------------------------CNKHRRVKVFQEGDYVMVFLREERFP 818 >ref|XP_007010495.1| Uncharacterized protein TCM_044370 [Theobroma cacao] gi|508727408|gb|EOY19305.1| Uncharacterized protein TCM_044370 [Theobroma cacao] Length = 1306 Score = 94.0 bits (232), Expect(2) = 8e-31 Identities = 45/69 (65%), Positives = 51/69 (73%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI C +TSDAT+IA LFF EVVRLHGIP +I DR KF+ HFW TLWR T L ++S Sbjct: 1018 FIPCFRTSDATHIAELFFCEVVRLHGIPTSIVSDRDVKFMGHFWRTLWRKFGTELKYSST 1077 Query: 385 CHPQTDGQT 359 CHPQTD QT Sbjct: 1078 CHPQTDSQT 1086 Score = 65.9 bits (159), Expect(2) = 8e-31 Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 6/126 (4%) Frame = -1 Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTHTHWI* 181 +VN +LGNIL+ L PK W L Q EFAYNN V+ S +K P E Y P H + Sbjct: 1088 VVNRSLGNILRCLIQNNPKTWDLVKPQAEFAYNNSVNRSIKKTPFEAAYGLKPQHVLDLV 1147 Query: 180 FHYQSYLV-----*ALLQITWLKR*LQSCL-MQKSSWRNTINKHRRVKVFKENDMVMVHI 19 Q V I + +++ L + + T N+HRR + F+E D V+V++ Sbjct: 1148 PLPQEARVSNEGELFADHIQKIHEEVKAALKASNAEYSFTANQHRRKQEFEEGDQVLVYL 1207 Query: 18 HKERFP 1 +ERFP Sbjct: 1208 RQERFP 1213 >gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis thaliana] Length = 280 Score = 99.0 bits (245), Expect(2) = 2e-30 Identities = 48/73 (65%), Positives = 54/73 (73%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI CKKT+DA+NIA LFFKEVVRLHG+PK+IT DR KFL HFW TLWR T+L +S Sbjct: 30 FIACKKTADASNIAKLFFKEVVRLHGVPKSITSDRDTKFLSHFWSTLWRMFGTALNRSST 89 Query: 385 CHPQTDGQTGKPN 347 H Q DGQT N Sbjct: 90 PHTQIDGQTEVTN 102 Score = 59.7 bits (143), Expect(2) = 2e-30 Identities = 45/120 (37%), Positives = 60/120 (50%), Gaps = 1/120 (0%) Frame = -1 Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVS-LSTRKLPSEIVYCRLPTHTHWI 184 + N TLGN+++S+ + PKQW LAL Q+EFAYN+VV + KLP + T Sbjct: 100 VTNRTLGNMVRSICGDNPKQWDLALPQIEFAYNSVVHVVDLVKLPKAL---GASAETMAE 156 Query: 183 *FHYQSYLV*ALLQITWLKR*LQSCLMQKSSWRNTINKHRRVKVFKENDMVMVHIHKERF 4 +V A L+ T K + +K RR KVFKE D VMV + K RF Sbjct: 157 EILVVKEVVKAKLEATGKKN------------KVAADKRRRFKVFKEGDDVMVLLRKGRF 204 >ref|XP_007202926.1| hypothetical protein PRUPE_ppa016266mg, partial [Prunus persica] gi|462398457|gb|EMJ04125.1| hypothetical protein PRUPE_ppa016266mg, partial [Prunus persica] Length = 572 Score = 82.8 bits (203), Expect(2) = 5e-30 Identities = 42/68 (61%), Positives = 48/68 (70%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI CKKT +A+N+A LFFKEVV L G+PK+IT DR KFL HF TLWR T L NS+ Sbjct: 323 FIACKKTVNASNVAKLFFKEVVWLPGVPKSITSDRDTKFLSHFQITLWRMFVTDLNRNSI 382 Query: 385 CHPQTDGQ 362 H Q DGQ Sbjct: 383 AHLQMDGQ 390 Score = 74.3 bits (181), Expect(2) = 5e-30 Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 3/131 (2%) Frame = -1 Query: 384 VIHRQM---VRLVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVY 214 + H QM +++ N TL ++++S+ ++PKQW +AL QVEFAYN+VV S K P VY Sbjct: 382 IAHLQMDGQIKVTNRTLRDMVRSICRDRPKQWDIALPQVEFAYNSVVHSSIGKSPFATVY 441 Query: 213 CRLPTHTHWI*FHYQSYLV*ALLQITWLKR*LQSCLMQKSSWRNTINKHRRVKVFKENDM 34 +P H + + ++ + +KHR V++F+E D Sbjct: 442 TWVPRHV------------------------VDLVKLPRAHKTSPADKHRLVRLFQEEDS 477 Query: 33 VMVHIHKERFP 1 VMV++ +ERFP Sbjct: 478 VMVYLRRERFP 488 >ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624555 [Citrus sinensis] Length = 821 Score = 103 bits (256), Expect(2) = 2e-28 Identities = 47/69 (68%), Positives = 54/69 (78%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI C KT DAT+IANLFFKE+VRLHG+P++I DR KFL HFW TLW L T L F++ Sbjct: 224 FIPCHKTDDATSIANLFFKEIVRLHGVPRSIVSDRDAKFLSHFWKTLWGKLGTKLLFSTT 283 Query: 385 CHPQTDGQT 359 CHPQTDGQT Sbjct: 284 CHPQTDGQT 292 Score = 48.9 bits (115), Expect(2) = 2e-28 Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 6/126 (4%) Frame = -1 Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLP-THTHWI 184 +VN TL +L+++ + K W L VEFAYN V +T+ P EIVY P T + Sbjct: 294 VVNRTLSTLLRAIIQKNLKTWEECLPHVEFAYNRTVHSATKFSPFEIVYGFNPLTPLDLL 353 Query: 183 *FHY-QSYLV*ALLQITWLK----R*LQSCLMQKSSWRNTINKHRRVKVFKENDMVMVHI 19 + + + ++K R Q + + NK R+ VF+ D V VH+ Sbjct: 354 PLPIDERASMDGKKKAEFVKQLHERTRQHIEKRTEQYATQANKGRKQVVFQPGDWVWVHM 413 Query: 18 HKERFP 1 KERFP Sbjct: 414 RKERFP 419 >gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] Length = 1475 Score = 100 bits (248), Expect(2) = 3e-28 Identities = 46/73 (63%), Positives = 56/73 (76%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI CKKT DAT++A L+FKEVV+LHGIPK+I DR +KF+ HFW TLW+ L T L F++ Sbjct: 1184 FIACKKTEDATSVAELYFKEVVKLHGIPKSIVSDRDSKFMSHFWRTLWKLLKTRLLFSTS 1243 Query: 385 CHPQTDGQTGKPN 347 HPQTDGQT N Sbjct: 1244 HHPQTDGQTEVTN 1256 Score = 51.2 bits (121), Expect(2) = 3e-28 Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 8/128 (6%) Frame = -1 Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVY---CRLPTHTH 190 + N TLG IL+ + K W L LAQ EFA+N S +T K P E+VY +PT Sbjct: 1254 VTNKTLGRILRCTVARSLKDWDLKLAQAEFAFNRAPSTTTGKSPFEVVYGVNPMMPTDLA 1313 Query: 189 WI*FHYQSY----LV*ALLQI-TWLKR*LQSCLMQKSSWRNTINKHRRVKVFKENDMVMV 25 I + Y V +L I +K+ ++ + + + K F+ D+V + Sbjct: 1314 PIKRNTIDYDAKKRVEQMLHIHEQVKKQIEKA---NEAHKGKSKGVKGTKSFEPGDLVWI 1370 Query: 24 HIHKERFP 1 H+ KERFP Sbjct: 1371 HLRKERFP 1378 >gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1588 Score = 98.2 bits (243), Expect(2) = 6e-28 Identities = 45/69 (65%), Positives = 54/69 (78%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI CKKT+DA+++A+LF KEVV+LHGIP+TI DR KFL HFW LW L T L F++ Sbjct: 1251 FIPCKKTNDASHVADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTS 1310 Query: 385 CHPQTDGQT 359 CHPQTDGQT Sbjct: 1311 CHPQTDGQT 1319 Score = 52.0 bits (123), Expect(2) = 6e-28 Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 6/126 (4%) Frame = -1 Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLP-THTHWI 184 +VN TLGN+L+++ K W L VEFAYN ST K P E+VY P T + Sbjct: 1321 VVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLL 1380 Query: 183 *FHYQSYL-V*ALLQITWLKR*LQSCLMQKSSWRNTI----NKHRRVKVFKENDMVMVHI 19 + + + +K+ + + + NK R+ +FK D+V VH+ Sbjct: 1381 PLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHM 1440 Query: 18 HKERFP 1 KERFP Sbjct: 1441 RKERFP 1446 >gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1588 Score = 98.2 bits (243), Expect(2) = 6e-28 Identities = 45/69 (65%), Positives = 54/69 (78%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI CKKT+DA+++A+LF KEVV+LHGIP+TI DR KFL HFW LW L T L F++ Sbjct: 1251 FIPCKKTNDASHVADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTS 1310 Query: 385 CHPQTDGQT 359 CHPQTDGQT Sbjct: 1311 CHPQTDGQT 1319 Score = 52.0 bits (123), Expect(2) = 6e-28 Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 6/126 (4%) Frame = -1 Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLP-THTHWI 184 +VN TLGN+L+++ K W L VEFAYN ST K P E+VY P T + Sbjct: 1321 VVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLL 1380 Query: 183 *FHYQSYL-V*ALLQITWLKR*LQSCLMQKSSWRNTI----NKHRRVKVFKENDMVMVHI 19 + + + +K+ + + + NK R+ +FK D+V VH+ Sbjct: 1381 PLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHM 1440 Query: 18 HKERFP 1 KERFP Sbjct: 1441 RKERFP 1446 >gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum] Length = 1096 Score = 98.2 bits (243), Expect(2) = 6e-28 Identities = 45/69 (65%), Positives = 54/69 (78%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI CKKT+DA+++A+LF KEVV+LHGIP+TI DR KFL HFW LW L T L F++ Sbjct: 759 FIPCKKTNDASHVADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTS 818 Query: 385 CHPQTDGQT 359 CHPQTDGQT Sbjct: 819 CHPQTDGQT 827 Score = 52.0 bits (123), Expect(2) = 6e-28 Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 6/126 (4%) Frame = -1 Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLP-THTHWI 184 +VN TLGN+L+++ K W L VEFAYN ST K P E+VY P T + Sbjct: 829 VVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLL 888 Query: 183 *FHYQSYL-V*ALLQITWLKR*LQSCLMQKSSWRNTI----NKHRRVKVFKENDMVMVHI 19 + + + +K+ + + + NK R+ +FK D+V VH+ Sbjct: 889 PLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHM 948 Query: 18 HKERFP 1 KERFP Sbjct: 949 RKERFP 954 >gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group] gi|31431012|gb|AAP52850.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 2447 Score = 100 bits (249), Expect(2) = 8e-28 Identities = 45/69 (65%), Positives = 53/69 (76%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI C KT DA++IA+LFF+E+VRLHG+P TI DR KFL HFW TLW L T L F++ Sbjct: 1298 FIPCHKTDDASHIADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTT 1357 Query: 385 CHPQTDGQT 359 CHPQTDGQT Sbjct: 1358 CHPQTDGQT 1366 Score = 49.3 bits (116), Expect(2) = 8e-28 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 9/129 (6%) Frame = -1 Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLP------- 202 +VN TL +L+++ + K W L +EFAYN + +T+ P +IVY LP Sbjct: 1368 VVNRTLSTMLRAVLKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLM 1427 Query: 201 --THTHWI*FHYQSYLV*ALLQITWLKR*LQSCLMQKSSWRNTINKHRRVKVFKENDMVM 28 + + F + A L + + ++ + ++ +K RR F+ D+V Sbjct: 1428 PLPSSEKLNFDAKQR---AELMLKLHETTKENIERMNAKYKFAGDKGRRELTFEPGDLVW 1484 Query: 27 VHIHKERFP 1 +H+ KERFP Sbjct: 1485 LHLRKERFP 1493 Score = 69.7 bits (169), Expect(2) = 2e-13 Identities = 34/73 (46%), Positives = 43/73 (58%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI K T +A L+F +V LHG+PK I DR ++F HFW L L T L F++ Sbjct: 2120 FIPVKTTYGGNKLAELYFARIVSLHGVPKKIVSDRESQFTSHFWKKLQEELGTRLNFSTA 2179 Query: 385 CHPQTDGQTGKPN 347 HPQTDGQT + N Sbjct: 2180 YHPQTDGQTERLN 2192 Score = 31.6 bits (70), Expect(2) = 2e-13 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Frame = -1 Query: 357 VNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVY---CRLP 202 +N L ++L + + K W +L EF+YNN S + P E +Y CR P Sbjct: 2191 LNQILEDMLHACVLDFGKTWDKSLPYAEFSYNNSYQASIQMAPYEALYGRKCRTP 2245 >dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] Length = 1587 Score = 100 bits (248), Expect(2) = 1e-27 Identities = 44/69 (63%), Positives = 53/69 (76%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI C K+ DAT++A+LFF+E+VRLHG+P TI DR KFL HFW TLW L T L F++ Sbjct: 1326 FIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTT 1385 Query: 385 CHPQTDGQT 359 CHPQTDGQT Sbjct: 1386 CHPQTDGQT 1394 Score = 48.9 bits (115), Expect(2) = 1e-27 Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 11/131 (8%) Frame = -1 Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLP------- 202 +VN TL +L+++ + K W L VEFAYN +T+K P EIVY LP Sbjct: 1396 VVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLL 1455 Query: 201 --THTHWI*F--HYQSYLV*ALLQITWLKR*LQSCLMQKSSWRNTINKHRRVKVFKENDM 34 + + F Y++ L+ L + T ++ ++ +K ++ F+ D+ Sbjct: 1456 PLPTSERVNFDAKYRAELMLKLHETT-----KENIERMNIKYKLAGSKGKKHVAFEPGDL 1510 Query: 33 VMVHIHKERFP 1 V +H+ K+RFP Sbjct: 1511 VWLHLRKDRFP 1521 >emb|CAN68662.1| hypothetical protein VITISV_004407 [Vitis vinifera] Length = 605 Score = 85.5 bits (210), Expect(2) = 1e-27 Identities = 40/65 (61%), Positives = 49/65 (75%) Frame = -3 Query: 541 DATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSMCHPQTDGQ 362 DA+ +ANLFF+E+VRLHGIP +IT DR KFL HFW TLW+ +TSL ++S HPQ DGQ Sbjct: 438 DASYVANLFFREIVRLHGIPHSITSDRDVKFLSHFWRTLWKLFDTSLKYSSTSHPQIDGQ 497 Query: 361 TGKPN 347 T N Sbjct: 498 TEVAN 502 Score = 63.5 bits (153), Expect(2) = 1e-27 Identities = 26/55 (47%), Positives = 41/55 (74%) Frame = -1 Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVYCRLPTH 196 + N TL N+++S++ +KPKQW AL Q+EFA+N++ + ST+K P E+VY +P H Sbjct: 500 VANRTLSNVIRSVNGDKPKQWGAALPQIEFAFNSMPNHSTKKTPFEVVYASVPRH 554 >emb|CAN72135.1| hypothetical protein VITISV_017100 [Vitis vinifera] Length = 587 Score = 94.7 bits (234), Expect(2) = 1e-27 Identities = 43/69 (62%), Positives = 54/69 (78%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI CKKT DA+NIANL+F+EVVRLHG+PK+IT D+ +KFL FW TLW+ T L +++ Sbjct: 460 FICCKKTMDASNIANLYFREVVRLHGVPKSITSDQDSKFLSPFWRTLWKKFGTKLQYSTS 519 Query: 385 CHPQTDGQT 359 HPQ DGQT Sbjct: 520 YHPQMDGQT 528 Score = 54.3 bits (129), Expect(2) = 1e-27 Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 3/58 (5%) Frame = -1 Query: 378 HRQM---VRLVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVSLSTRKLPSEIVY 214 H QM +VN +LG++L+ L E PKQW +AQ EFAYN +L+T K P E+VY Sbjct: 521 HPQMDGQTEVVNRSLGDLLRCLVGENPKQWEAVVAQAEFAYNYSKNLTTGKSPFEVVY 578 >gb|AAS49090.1| At2g06190 [Arabidopsis thaliana] Length = 148 Score = 99.0 bits (245), Expect(2) = 1e-27 Identities = 48/73 (65%), Positives = 54/73 (73%) Frame = -3 Query: 565 FITCKKTSDATNIANLFFKEVVRLHGIPKTITFDRYNKFLCHFWCTLWR*LNTSL*FNSM 386 FI CKKT+DA+NIA LFFKEVVRLHG+PK+IT DR KFL HFW TLWR T+L +S Sbjct: 30 FIACKKTADASNIAKLFFKEVVRLHGVPKSITSDRDTKFLSHFWSTLWRMFGTALNRSST 89 Query: 385 CHPQTDGQTGKPN 347 H Q DGQT N Sbjct: 90 PHTQIDGQTEVTN 102 Score = 50.1 bits (118), Expect(2) = 1e-27 Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 1/48 (2%) Frame = -1 Query: 360 LVNLTLGNILQSLSSEKPKQWVLALAQVEFAYNNVVS-LSTRKLPSEI 220 + N TLGN+++S+ + PKQW LAL Q+EFAYN+VV + KLP + Sbjct: 100 VTNRTLGNMVRSICGDNPKQWDLALPQIEFAYNSVVHVVDLVKLPKAL 147