BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00042543
         (320 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB93457.1| hypothetical protein L484_006119 [Morus notabilis]      85   1e-21
ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containi...    92   1e-16
ref|XP_002511542.1| pentatricopeptide repeat-containing protein,...    87   3e-15
ref|XP_007037265.1| Tetratricopeptide repeat-like superfamily pr...    73   3e-14
ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containi...    46   1e-06
ref|XP_007046822.1| Pentatricopeptide repeat (PPR) superfamily p...    52   2e-06
ref|XP_002514718.1| pentatricopeptide repeat-containing protein,...    49   8e-06

>gb|EXB93457.1| hypothetical protein L484_006119 [Morus notabilis]
          Length = 612

 Score = 85.1 bits (209), Expect(2) = 1e-21
 Identities = 38/75 (50%), Positives = 56/75 (74%)
 Frame = +1

Query: 94  ALIPIFFKGLLDAPIINYARKLFDQIPQPDPYLYTSMIRAYSKLSLNKEALETFSSMHHN 273
           +L P+F K LLD+  ++YAR+LFD+IPQPD ++Y +++ +YSKLS+NKEALETF SM+ +
Sbjct: 31  SLTPVFVKKLLDSSAVHYARRLFDKIPQPDMHIYNALVCSYSKLSMNKEALETFCSMYQS 90

Query: 274 KTQIICFVFPSVFKS 318
             ++     P V KS
Sbjct: 91  GIRVFSSTVPPVIKS 105



 Score = 43.9 bits (102), Expect(2) = 1e-21
 Identities = 21/39 (53%), Positives = 28/39 (71%)
 Frame = +2

Query: 2   MDQHLVTLLQSSLHPNQFKQIHALIITKYSMLSSQFSSK 118
           M+ +L +LLQSSL  NQ KQ+HAL+ITK+  L+  F  K
Sbjct: 1   MEGYLTSLLQSSLRLNQLKQVHALVITKHPSLTPVFVKK 39


>ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 618

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 42/75 (56%), Positives = 54/75 (72%)
 Frame = +1

Query: 94  ALIPIFFKGLLDAPIINYARKLFDQIPQPDPYLYTSMIRAYSKLSLNKEALETFSSMHHN 273
           +L P+F + LL+A  I YAR++FDQIP PD  ++ S I AYS+LSLN EAL TF SMH N
Sbjct: 31  SLTPLFIRRLLNASFIQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQN 90

Query: 274 KTQIICFVFPSVFKS 318
             +I+CF  P +FKS
Sbjct: 91  NVRIVCFTIPPIFKS 105


>ref|XP_002511542.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550657|gb|EEF52144.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 434

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
 Frame = +1

Query: 49  PIQANPCSHHHKIL----HALIPIFFKGLLDAPIINYARKLFDQIPQPDPYLYTSMIRAY 216
           P+Q N     H ++     +L  +  + LL+   I+YAR+LFDQ+PQP   LY S+I  Y
Sbjct: 12  PLQINQLKQIHSLIIIKHPSLATVLVRKLLNLSDIDYARQLFDQVPQPGQILYNSLISTY 71

Query: 217 SKLSLNKEALETFSSMHHNKTQIICFVFPSVFKS 318
           SKLSL+K+AL+TF SMHH+ T++ CF  P V K+
Sbjct: 72  SKLSLHKDALKTFFSMHHSDTRLSCFTGPPVIKA 105


>ref|XP_007037265.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao] gi|508774510|gb|EOY21766.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative [Theobroma cacao]
          Length = 707

 Score = 72.8 bits (177), Expect(2) = 3e-14
 Identities = 36/75 (48%), Positives = 51/75 (68%)
 Frame = +1

Query: 94  ALIPIFFKGLLDAPIINYARKLFDQIPQPDPYLYTSMIRAYSKLSLNKEALETFSSMHHN 273
           AL  I  K L+D+  + YAR++FD+IP PD  LY S I +Y+KLS NKEA++ F+SMH +
Sbjct: 31  ALTRILVKKLIDSSFLGYAREVFDRIPLPDQALYISFISSYTKLSFNKEAIKLFASMHSS 90

Query: 274 KTQIICFVFPSVFKS 318
           +TQ+      +V KS
Sbjct: 91  RTQMSSRAVLAVIKS 105



 Score = 31.2 bits (69), Expect(2) = 3e-14
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +2

Query: 2   MDQHLVTLLQSSLHPNQFKQIHALIITKYSMLS 100
           M+ +L+ LL SS   NQFKQIH+ II   + L+
Sbjct: 1   MNPNLLALLHSSDQLNQFKQIHSQIIVNCAALT 33


>ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
           gi|297737690|emb|CBI26891.3| unnamed protein product
           [Vitis vinifera]
          Length = 610

 Score = 46.2 bits (108), Expect(2) = 1e-06
 Identities = 24/78 (30%), Positives = 43/78 (55%)
 Frame = +1

Query: 85  ILHALIPIFFKGLLDAPIINYARKLFDQIPQPDPYLYTSMIRAYSKLSLNKEALETFSSM 264
           I +ALI      L     ++YAR+LFD++ +P P+L+ ++++ Y K  +  +A+  +  M
Sbjct: 67  IKNALITQLLTSLTLLGDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKM 126

Query: 265 HHNKTQIICFVFPSVFKS 318
            H   +   F FP V K+
Sbjct: 127 RHLGVRPDPFTFPFVIKA 144



 Score = 31.6 bits (70), Expect(2) = 1e-06
 Identities = 16/26 (61%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
 Frame = +2

Query: 8   QHLVTLLQS-SLHPNQFKQIHALIIT 82
           Q L TLLQS S HP+  KQ+HAL++T
Sbjct: 37  QALTTLLQSCSSHPSLLKQLHALLLT 62


>ref|XP_007046822.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508699083|gb|EOX90979.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 658

 Score = 52.4 bits (124), Expect(2) = 2e-06
 Identities = 22/62 (35%), Positives = 40/62 (64%)
 Frame = +1

Query: 133 PIINYARKLFDQIPQPDPYLYTSMIRAYSKLSLNKEALETFSSMHHNKTQIICFVFPSVF 312
           P+ NYA+ +FDQ+  P+P+L+T++IR Y+     KE++  +S M    +  + F F ++F
Sbjct: 98  PMDNYAKLVFDQVEYPNPFLWTALIRGYALQGHVKESVSVYSCMREEGSLPVSFTFSALF 157

Query: 313 KS 318
           K+
Sbjct: 158 KA 159



 Score = 24.6 bits (52), Expect(2) = 2e-06
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 2   MDQHLVTLLQSSLHPNQFKQIHALIITK 85
           ++  L++ L       QFKQ HA II K
Sbjct: 49  LESQLISTLNGCTSLTQFKQTHAYIIRK 76


>ref|XP_002514718.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546322|gb|EEF47824.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 399

 Score = 48.9 bits (115), Expect(2) = 8e-06
 Identities = 21/65 (32%), Positives = 40/65 (61%)
 Frame = +1

Query: 124 LDAPIINYARKLFDQIPQPDPYLYTSMIRAYSKLSLNKEALETFSSMHHNKTQIICFVFP 303
           L+ P+  Y R +F+Q+  P+P+LY+++IR YS   +  E+++ +S M       + F F 
Sbjct: 85  LNIPMDPYPRSIFNQVKFPNPFLYSAVIRGYSIEGILSESVKVYSFMRMEHVGPVSFTFS 144

Query: 304 SVFKS 318
           ++FK+
Sbjct: 145 AIFKA 149



 Score = 26.2 bits (56), Expect(2) = 8e-06
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 2   MDQHLVTLLQSSLHPNQFKQIHALIIT 82
           ++ H+VT L S    +Q KQ+HA I++
Sbjct: 39  LETHIVTTLGSCTDISQIKQVHAHILS 65