BLASTX nr result
ID: Akebia24_contig00042543
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia24_contig00042543 (320 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EXB93457.1| hypothetical protein L484_006119 [Morus notabilis] 85 1e-21 ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containi... 92 1e-16 ref|XP_002511542.1| pentatricopeptide repeat-containing protein,... 87 3e-15 ref|XP_007037265.1| Tetratricopeptide repeat-like superfamily pr... 73 3e-14 ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containi... 46 1e-06 ref|XP_007046822.1| Pentatricopeptide repeat (PPR) superfamily p... 52 2e-06 ref|XP_002514718.1| pentatricopeptide repeat-containing protein,... 49 8e-06 >gb|EXB93457.1| hypothetical protein L484_006119 [Morus notabilis] Length = 612 Score = 85.1 bits (209), Expect(2) = 1e-21 Identities = 38/75 (50%), Positives = 56/75 (74%) Frame = +1 Query: 94 ALIPIFFKGLLDAPIINYARKLFDQIPQPDPYLYTSMIRAYSKLSLNKEALETFSSMHHN 273 +L P+F K LLD+ ++YAR+LFD+IPQPD ++Y +++ +YSKLS+NKEALETF SM+ + Sbjct: 31 SLTPVFVKKLLDSSAVHYARRLFDKIPQPDMHIYNALVCSYSKLSMNKEALETFCSMYQS 90 Query: 274 KTQIICFVFPSVFKS 318 ++ P V KS Sbjct: 91 GIRVFSSTVPPVIKS 105 Score = 43.9 bits (102), Expect(2) = 1e-21 Identities = 21/39 (53%), Positives = 28/39 (71%) Frame = +2 Query: 2 MDQHLVTLLQSSLHPNQFKQIHALIITKYSMLSSQFSSK 118 M+ +L +LLQSSL NQ KQ+HAL+ITK+ L+ F K Sbjct: 1 MEGYLTSLLQSSLRLNQLKQVHALVITKHPSLTPVFVKK 39 >ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Vitis vinifera] Length = 618 Score = 91.7 bits (226), Expect = 1e-16 Identities = 42/75 (56%), Positives = 54/75 (72%) Frame = +1 Query: 94 ALIPIFFKGLLDAPIINYARKLFDQIPQPDPYLYTSMIRAYSKLSLNKEALETFSSMHHN 273 +L P+F + LL+A I YAR++FDQIP PD ++ S I AYS+LSLN EAL TF SMH N Sbjct: 31 SLTPLFIRRLLNASFIQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQN 90 Query: 274 KTQIICFVFPSVFKS 318 +I+CF P +FKS Sbjct: 91 NVRIVCFTIPPIFKS 105 >ref|XP_002511542.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223550657|gb|EEF52144.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 434 Score = 86.7 bits (213), Expect = 3e-15 Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 4/94 (4%) Frame = +1 Query: 49 PIQANPCSHHHKIL----HALIPIFFKGLLDAPIINYARKLFDQIPQPDPYLYTSMIRAY 216 P+Q N H ++ +L + + LL+ I+YAR+LFDQ+PQP LY S+I Y Sbjct: 12 PLQINQLKQIHSLIIIKHPSLATVLVRKLLNLSDIDYARQLFDQVPQPGQILYNSLISTY 71 Query: 217 SKLSLNKEALETFSSMHHNKTQIICFVFPSVFKS 318 SKLSL+K+AL+TF SMHH+ T++ CF P V K+ Sbjct: 72 SKLSLHKDALKTFFSMHHSDTRLSCFTGPPVIKA 105 >ref|XP_007037265.1| Tetratricopeptide repeat-like superfamily protein, putative [Theobroma cacao] gi|508774510|gb|EOY21766.1| Tetratricopeptide repeat-like superfamily protein, putative [Theobroma cacao] Length = 707 Score = 72.8 bits (177), Expect(2) = 3e-14 Identities = 36/75 (48%), Positives = 51/75 (68%) Frame = +1 Query: 94 ALIPIFFKGLLDAPIINYARKLFDQIPQPDPYLYTSMIRAYSKLSLNKEALETFSSMHHN 273 AL I K L+D+ + YAR++FD+IP PD LY S I +Y+KLS NKEA++ F+SMH + Sbjct: 31 ALTRILVKKLIDSSFLGYAREVFDRIPLPDQALYISFISSYTKLSFNKEAIKLFASMHSS 90 Query: 274 KTQIICFVFPSVFKS 318 +TQ+ +V KS Sbjct: 91 RTQMSSRAVLAVIKS 105 Score = 31.2 bits (69), Expect(2) = 3e-14 Identities = 16/33 (48%), Positives = 22/33 (66%) Frame = +2 Query: 2 MDQHLVTLLQSSLHPNQFKQIHALIITKYSMLS 100 M+ +L+ LL SS NQFKQIH+ II + L+ Sbjct: 1 MNPNLLALLHSSDQLNQFKQIHSQIIVNCAALT 33 >ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510, mitochondrial [Vitis vinifera] gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera] Length = 610 Score = 46.2 bits (108), Expect(2) = 1e-06 Identities = 24/78 (30%), Positives = 43/78 (55%) Frame = +1 Query: 85 ILHALIPIFFKGLLDAPIINYARKLFDQIPQPDPYLYTSMIRAYSKLSLNKEALETFSSM 264 I +ALI L ++YAR+LFD++ +P P+L+ ++++ Y K + +A+ + M Sbjct: 67 IKNALITQLLTSLTLLGDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKM 126 Query: 265 HHNKTQIICFVFPSVFKS 318 H + F FP V K+ Sbjct: 127 RHLGVRPDPFTFPFVIKA 144 Score = 31.6 bits (70), Expect(2) = 1e-06 Identities = 16/26 (61%), Positives = 20/26 (76%), Gaps = 1/26 (3%) Frame = +2 Query: 8 QHLVTLLQS-SLHPNQFKQIHALIIT 82 Q L TLLQS S HP+ KQ+HAL++T Sbjct: 37 QALTTLLQSCSSHPSLLKQLHALLLT 62 >ref|XP_007046822.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao] gi|508699083|gb|EOX90979.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao] Length = 658 Score = 52.4 bits (124), Expect(2) = 2e-06 Identities = 22/62 (35%), Positives = 40/62 (64%) Frame = +1 Query: 133 PIINYARKLFDQIPQPDPYLYTSMIRAYSKLSLNKEALETFSSMHHNKTQIICFVFPSVF 312 P+ NYA+ +FDQ+ P+P+L+T++IR Y+ KE++ +S M + + F F ++F Sbjct: 98 PMDNYAKLVFDQVEYPNPFLWTALIRGYALQGHVKESVSVYSCMREEGSLPVSFTFSALF 157 Query: 313 KS 318 K+ Sbjct: 158 KA 159 Score = 24.6 bits (52), Expect(2) = 2e-06 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +2 Query: 2 MDQHLVTLLQSSLHPNQFKQIHALIITK 85 ++ L++ L QFKQ HA II K Sbjct: 49 LESQLISTLNGCTSLTQFKQTHAYIIRK 76 >ref|XP_002514718.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223546322|gb|EEF47824.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 399 Score = 48.9 bits (115), Expect(2) = 8e-06 Identities = 21/65 (32%), Positives = 40/65 (61%) Frame = +1 Query: 124 LDAPIINYARKLFDQIPQPDPYLYTSMIRAYSKLSLNKEALETFSSMHHNKTQIICFVFP 303 L+ P+ Y R +F+Q+ P+P+LY+++IR YS + E+++ +S M + F F Sbjct: 85 LNIPMDPYPRSIFNQVKFPNPFLYSAVIRGYSIEGILSESVKVYSFMRMEHVGPVSFTFS 144 Query: 304 SVFKS 318 ++FK+ Sbjct: 145 AIFKA 149 Score = 26.2 bits (56), Expect(2) = 8e-06 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +2 Query: 2 MDQHLVTLLQSSLHPNQFKQIHALIIT 82 ++ H+VT L S +Q KQ+HA I++ Sbjct: 39 LETHIVTTLGSCTDISQIKQVHAHILS 65