BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00042506
         (300 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat...    62   8e-08
ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat...    57   2e-06
ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06

>ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/61 (54%), Positives = 40/61 (65%)
 Frame = +1

Query: 118 PSTAPQLKWKISQNLNLRTLLDTILENPHHMLSYAPIFQFLTGTHFLKLGQQVHAHMTLL 297
           P  +P+   K S NL LR LL  IL++  H  SYAPIFQFLT  +F+KLGQQ HA + L 
Sbjct: 47  PPPSPECTPKPSLNLQLRILLQPILQHFPHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLH 106

Query: 298 G 300
           G
Sbjct: 107 G 107


>ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
 Frame = +1

Query: 118 PSTAPQLKWKISQNLNLRTLLDTILE-----NPHHMLSYAPIFQFLTGTHFLKLGQQVHA 282
           P ++P  K  IS  L +   L  +L+      P  +LSYAP+FQFLTG + LKLG QVHA
Sbjct: 36  PPSSPPFKCSISP-LTISATLQNLLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHA 94

Query: 283 HMTLLG 300
           HM L G
Sbjct: 95  HMLLRG 100


>ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
 Frame = +1

Query: 118 PSTAPQLKWKISQNLNLRTLLDTILE-----NPHHMLSYAPIFQFLTGTHFLKLGQQVHA 282
           P ++P  K  IS  L +   L  +L+      P  +LSYAP+FQFLTG + LKLG QVHA
Sbjct: 36  PPSSPPFKCSISP-LTISATLQNLLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHA 94

Query: 283 HMTLLG 300
           HM L G
Sbjct: 95  HMLLRG 100