BLASTX nr result
ID: Akebia24_contig00042211
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00042211
(265 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar... 73 5e-11
gb|AAC02666.1| polyprotein [Arabidopsis thaliana] 71 1e-10
gb|AAC02664.1| polyprotein [Arabidopsis thaliana] 71 1e-10
gb|AAC02669.1| polyprotein [Arabidopsis thaliana] 71 1e-10
gb|AAC02672.1| polyprotein [Arabidopsis arenosa] 71 2e-10
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 69 5e-10
emb|CAN67565.1| hypothetical protein VITISV_020484 [Vitis vinifera] 68 1e-09
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana] 66 4e-09
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi... 66 4e-09
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr... 66 6e-09
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 65 8e-09
dbj|BAA78427.1| polyprotein [Arabidopsis thaliana] 65 8e-09
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 65 8e-09
dbj|BAM44532.1| polyprotein [Arabidopsis thaliana] 65 8e-09
dbj|BAM44531.1| polyprotein [Arabidopsis thaliana] 65 8e-09
dbj|BAM44530.1| polyprotein [Arabidopsis thaliana] 65 8e-09
dbj|BAM44529.1| polyprotein [Arabidopsis thaliana] 65 8e-09
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 65 8e-09
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana] 65 8e-09
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|... 65 8e-09
>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
Length = 1522
Score = 72.8 bits (177), Expect = 5e-11
Identities = 37/73 (50%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIW-TSPH 205
+L+ L SSKS+ + + K C++C LGKS+RLPF LSTF +S PLE IH D+W SP
Sbjct: 471 VLHQLASSKSIIIINKV-VKTVCEACHLGKSTRLPFMLSTFNASRPLERIHCDLWGPSPT 529
Query: 206 YSIKGSKYYIVFV 244
S++G +YY+VF+
Sbjct: 530 SSVQGFRYYVVFI 542
>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSPHY 208
IL L+S SLP+ SL+ ++ C C + KS +LPF +T SS PLE ++ D+WTSP
Sbjct: 480 ILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDVWTSPIT 539
Query: 209 SIKGSKYYIVFV 244
SI KYY+V V
Sbjct: 540 SIDNYKYYLVIV 551
>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSPHY 208
IL L+S SLP+ SL+ ++ C C + KS +LPF +T SS PLE ++ D+WTSP
Sbjct: 480 ILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDVWTSPIT 539
Query: 209 SIKGSKYYIVFV 244
SI KYY+V V
Sbjct: 540 SIDNYKYYLVIV 551
>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSPHY 208
IL L+S SLP+ SL+ ++ C C + KS +LPF +T SS PLE ++ D+WTSP
Sbjct: 480 ILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDVWTSPIT 539
Query: 209 SIKGSKYYIVFV 244
SI KYY+V V
Sbjct: 540 SIDNYKYYLVIV 551
>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
Length = 1390
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSPHY 208
IL L+S SLP+ SL+ ++ C C + KS +LPF +T SS PLE ++ D+WTSP
Sbjct: 480 ILKTLISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDVWTSPIT 539
Query: 209 SIKGSKYYIVFV 244
SI KYY+V V
Sbjct: 540 SIDNYKYYLVIV 551
>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = +2
Query: 23 SIILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSP 202
S+I L S L ++GS FC +C LGK+ +LPF S+ SS+PL LIH D+W SP
Sbjct: 469 SVIFNSLFHSNKLSVKGSSTKLEFCSACQLGKAKQLPFPESSRQSSVPLALIHSDVWVSP 528
Query: 203 HYSIKGSKYYIVFV 244
S G YY++F+
Sbjct: 529 VQSTGGCSYYVLFI 542
>emb|CAN67565.1| hypothetical protein VITISV_020484 [Vitis vinifera]
Length = 547
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/72 (44%), Positives = 44/72 (61%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSPHY 208
+L L KS L S+ FC SC LGK+ +LPF T S++PL L+H D+W SP
Sbjct: 333 VLESLARIKSFSLSNSVNKLGFCSSCQLGKAKQLPFHELTRQSAVPLSLVHSDVWASPLM 392
Query: 209 SIKGSKYYIVFV 244
S+ G +YY++FV
Sbjct: 393 SVCGCRYYVLFV 404
>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
Length = 1429
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSPHY 208
IL ++S LPL ++ ++ C C + KS +LPF +T VSS PLE ++ D+WTSP
Sbjct: 461 ILKDVVSHFHLPLSNTIPKQLPCSDCSINKSHKLPFFTNTIVSSQPLEYLYTDVWTSPCI 520
Query: 209 SIKGSKYYIVFV 244
S+ KYY+V V
Sbjct: 521 SVDNYKYYLVIV 532
>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1149
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIW-TSPH 205
+L L + K++ + S C+SC LGKSSRLPF S F++S PLE +H D+W +P
Sbjct: 460 VLQLLANKKAIQINKSTSK--MCESCRLGKSSRLPFIASDFIASRPLERVHCDLWGPAPV 517
Query: 206 YSIKGSKYYIVFVSS 250
SI+G +YY++F+ +
Sbjct: 518 SSIQGFQYYVIFIDN 532
>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
polyprotein from Arabidopsis arenosa [Arabidopsis
thaliana]
Length = 1194
Score = 65.9 bits (159), Expect = 6e-09
Identities = 31/71 (43%), Positives = 44/71 (61%)
Frame = +2
Query: 32 LYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSPHYS 211
L ++S SLP+ SL+ + C C L K+ +LPF +T S+ PLE ++ D+WTSP S
Sbjct: 436 LKVVVSQFSLPVSNSLQKQFNCSDCLLNKTHKLPFHTNTITSTQPLEYLYIDLWTSPIVS 495
Query: 212 IKGSKYYIVFV 244
I KYY+V V
Sbjct: 496 IDNFKYYLVIV 506
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 65.5 bits (158), Expect = 8e-09
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSPHY 208
IL ++S+ SLP+ + C C + KS ++PFS ST SS PLE I+ D+W+SP
Sbjct: 476 ILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPIL 535
Query: 209 SIKGSKYYIVFV 244
SI +YY++FV
Sbjct: 536 SIDNYRYYVIFV 547
>dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 65.5 bits (158), Expect = 8e-09
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSPHY 208
IL ++S+ SLP+ + C C + KS ++PFS ST SS PLE I+ D+W+SP
Sbjct: 476 ILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPIL 535
Query: 209 SIKGSKYYIVFV 244
SI +YY++FV
Sbjct: 536 SIDNYRYYVIFV 547
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 65.5 bits (158), Expect = 8e-09
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSPHY 208
IL ++S+ SLP+ + C C + KS ++PFS ST SS PLE I+ D+W+SP
Sbjct: 331 ILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPIL 390
Query: 209 SIKGSKYYIVFV 244
SI +YY++FV
Sbjct: 391 SIDNYRYYVIFV 402
>dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 65.5 bits (158), Expect = 8e-09
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSPHY 208
IL ++S+ SLP+ + C C + KS ++PFS ST SS PLE I+ D+W+SP
Sbjct: 476 ILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPIL 535
Query: 209 SIKGSKYYIVFV 244
SI +YY++FV
Sbjct: 536 SIDNYRYYVIFV 547
>dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 65.5 bits (158), Expect = 8e-09
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSPHY 208
IL ++S+ SLP+ + C C + KS ++PFS ST SS PLE I+ D+W+SP
Sbjct: 476 ILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPIL 535
Query: 209 SIKGSKYYIVFV 244
SI +YY++FV
Sbjct: 536 SIDNYRYYVIFV 547
>dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 65.5 bits (158), Expect = 8e-09
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSPHY 208
IL ++S+ SLP+ + C C + KS ++PFS ST SS PLE I+ D+W+SP
Sbjct: 476 ILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPIL 535
Query: 209 SIKGSKYYIVFV 244
SI +YY++FV
Sbjct: 536 SIDNYRYYVIFV 547
>dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 65.5 bits (158), Expect = 8e-09
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSPHY 208
IL ++S+ SLP+ + C C + KS ++PFS ST SS PLE I+ D+W+SP
Sbjct: 476 ILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPIL 535
Query: 209 SIKGSKYYIVFV 244
SI +YY++FV
Sbjct: 536 SIDNYRYYVIFV 547
>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 65.5 bits (158), Expect = 8e-09
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSPHY 208
IL ++S+ SLP+ + C C + KS ++PFS ST SS PLE I+ D+W+SP
Sbjct: 476 ILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPIL 535
Query: 209 SIKGSKYYIVFV 244
SI +YY++FV
Sbjct: 536 SIDNYRYYVIFV 547
>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 65.5 bits (158), Expect = 8e-09
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSPHY 208
IL ++S+ SLP+ + C C + KS ++PFS ST SS PLE I+ D+W+SP
Sbjct: 476 ILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPIL 535
Query: 209 SIKGSKYYIVFV 244
SI +YY++FV
Sbjct: 536 SIDNYRYYVIFV 547
>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 65.5 bits (158), Expect = 8e-09
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +2
Query: 29 ILYCLLSSKSLPLQGSLKYKVFCDSCPLGKSSRLPFSLSTFVSSMPLELIHYDIWTSPHY 208
IL ++S+ SLP+ + C C + KS ++PFS ST SS PLE I+ D+W+SP
Sbjct: 476 ILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPIL 535
Query: 209 SIKGSKYYIVFV 244
SI +YY++FV
Sbjct: 536 SIDNYRYYVIFV 547