BLASTX nr result

ID: Akebia24_contig00041783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00041783
         (381 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35661.3| unnamed protein product [Vitis vinifera]               45   1e-07
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr...    57   3e-06
ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citr...    57   3e-06
ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citr...    57   3e-06
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...    45   8e-06

>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score = 45.4 bits (106), Expect(2) = 1e-07
 Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
 Frame = +3

Query: 213 KSKDPRR--------ALDLKQQSLTVDYNVPKREPIVGTMCSRKHKIVKESVLDGHNLKR 368
           KS+DPR         +LDL ++ L    N PK +P+   + SRK K  +E +LDG   KR
Sbjct: 514 KSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTKR 573

Query: 369 QRNG 380
           QRNG
Sbjct: 574 QRNG 577



 Score = 35.8 bits (81), Expect(2) = 1e-07
 Identities = 24/61 (39%), Positives = 31/61 (50%)
 Frame = +2

Query: 2   GDSSGEVSISSTASSIKTENPSVPVQPFTYATPIVDCSSEQESIPAKTGQLGSCLNPILK 181
           GD SGEVS SST S+  T N      P   + P +D   +   +P  TG + S  N IL+
Sbjct: 452 GDISGEVSSSSTISAPITANAPALGHPIVSSAPQMDI-VQGLVVPRNTGAVNSRFNSILR 510

Query: 182 A 184
           A
Sbjct: 511 A 511


>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
           gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
           polymerase II C-terminal domain phosphatase-like 3-like
           [Citrus sinensis] gi|557541056|gb|ESR52100.1|
           hypothetical protein CICLE_v10030535mg [Citrus
           clementina]
          Length = 1234

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
 Frame = +3

Query: 213 KSKDPR------RALDLKQQSLTVDYNVPKREPIVGTMCSRKHKIVKESVLDGHNLKRQR 374
           KS+DPR       AL+L  Q   + +N PK EP+   M SRK K V+E VLDG  LKRQR
Sbjct: 525 KSRDPRLRFASSNALNLNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEPVLDGPALKRQR 584

Query: 375 NG 380
           NG
Sbjct: 585 NG 586


>ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
           gi|557541054|gb|ESR52098.1| hypothetical protein
           CICLE_v10030535mg [Citrus clementina]
          Length = 1208

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
 Frame = +3

Query: 213 KSKDPR------RALDLKQQSLTVDYNVPKREPIVGTMCSRKHKIVKESVLDGHNLKRQR 374
           KS+DPR       AL+L  Q   + +N PK EP+   M SRK K V+E VLDG  LKRQR
Sbjct: 525 KSRDPRLRFASSNALNLNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEPVLDGPALKRQR 584

Query: 375 NG 380
           NG
Sbjct: 585 NG 586


>ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
           gi|567892677|ref|XP_006438859.1| hypothetical protein
           CICLE_v10030535mg [Citrus clementina]
           gi|557541053|gb|ESR52097.1| hypothetical protein
           CICLE_v10030535mg [Citrus clementina]
           gi|557541055|gb|ESR52099.1| hypothetical protein
           CICLE_v10030535mg [Citrus clementina]
          Length = 1118

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
 Frame = +3

Query: 213 KSKDPR------RALDLKQQSLTVDYNVPKREPIVGTMCSRKHKIVKESVLDGHNLKRQR 374
           KS+DPR       AL+L  Q   + +N PK EP+   M SRK K V+E VLDG  LKRQR
Sbjct: 525 KSRDPRLRFASSNALNLNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEPVLDGPALKRQR 584

Query: 375 NG 380
           NG
Sbjct: 585 NG 586


>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Vitis vinifera]
          Length = 1238

 Score = 45.4 bits (106), Expect(2) = 8e-06
 Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
 Frame = +3

Query: 213 KSKDPRR--------ALDLKQQSLTVDYNVPKREPIVGTMCSRKHKIVKESVLDGHNLKR 368
           KS+DPR         +LDL ++ L    N PK +P+   + SRK K  +E +LDG   KR
Sbjct: 532 KSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTKR 591

Query: 369 QRNG 380
           QRNG
Sbjct: 592 QRNG 595



 Score = 29.6 bits (65), Expect(2) = 8e-06
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = +2

Query: 2   GDSSGEVSISSTASSIKTENPSVPVQPFTYATPIVDCSSEQ 124
           GD SGEVS SST S+  T N      P   + P +D S  Q
Sbjct: 466 GDISGEVSSSSTISAPITANAPALGHPIVSSAPQMDSSIVQ 506


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