BLASTX nr result

ID: Akebia24_contig00041765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00041765
         (447 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006445575.1| hypothetical protein CICLE_v10017802mg [Citr...    69   7e-10
ref|XP_002523406.1| RNA binding protein, putative [Ricinus commu...    67   3e-09
emb|CBI16556.3| unnamed protein product [Vitis vinifera]               65   1e-08
emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]    64   3e-08
ref|XP_006368531.1| hypothetical protein POPTR_0001s03990g [Popu...    60   2e-07
ref|XP_006386043.1| hypothetical protein POPTR_0003s20880g [Popu...    60   4e-07
ref|XP_002276886.1| PREDICTED: uncharacterized protein LOC100250...    60   4e-07
emb|CAN81897.1| hypothetical protein VITISV_009053 [Vitis vinifera]    60   4e-07
ref|XP_004294948.1| PREDICTED: pumilio homolog 12-like [Fragaria...    56   5e-06

>ref|XP_006445575.1| hypothetical protein CICLE_v10017802mg [Citrus clementina]
           gi|568871549|ref|XP_006488946.1| PREDICTED: pumilio
           homolog 12-like isoform X1 [Citrus sinensis]
           gi|568871551|ref|XP_006488947.1| PREDICTED: pumilio
           homolog 12-like isoform X2 [Citrus sinensis]
           gi|557548186|gb|ESR58815.1| hypothetical protein
           CICLE_v10017802mg [Citrus clementina]
          Length = 769

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 59/165 (35%), Positives = 78/165 (47%), Gaps = 17/165 (10%)
 Frame = -2

Query: 446 NLDGATTTVKNDHQSPIKNVVNREDSNLPDDQSLTSAFTQLNFKDGLAIGETSP-----R 282
           NLD     V    QSPIK +  +E++NLPDDQSLTSAF +L F  G+ I   SP      
Sbjct: 65  NLDEGKILVNKSQQSPIKRIP-QEEANLPDDQSLTSAFAELRFNGGIPIEPVSPWANCNS 123

Query: 281 LINYKTLPNC----------TILDSGRTAIPSPRSPNSL-NGMTFINPTSNGLEKFN-VE 138
             NY  L +C          + +DS      S +S NS+ +G    + T    E  N V 
Sbjct: 124 SPNYAVLLDCQHPNGLKEPVSNVDSQLMVASSFQSTNSVPSGFDEFDLTKVRQESSNMVN 183

Query: 137 LSGQELKKQKPGYCQSLENLSVDLGLREQQHNVPEYSGLMPIAPP 3
           L  QELKK + GY Q +EN S   G     H++  +  L  +  P
Sbjct: 184 LDVQELKKLQVGYRQPVENFS---GALPNAHSLQGFRFLSNVPVP 225


>ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis]
           gi|223537356|gb|EEF38985.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 771

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 55/144 (38%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
 Frame = -2

Query: 422 VKNDHQSPIKNVVNREDSNLPDDQSLTSAFTQLNFKDGLAIGETSPRLINYKTLPNCTIL 243
           +  + +SPIK V + E++NLPDDQSLTSAFT L+F  G   G T     N+K+ P    +
Sbjct: 69  ISKNQESPIKRVQS-EEANLPDDQSLTSAFTDLSFNTG--SGST-----NFKSSPKAPSI 120

Query: 242 DSGRTAIPSPRSPNSLN-GMTFINPTSNGLEKFN-VELSGQELKKQKPGY--CQSLENLS 75
               T  PS R P ++  G    N T  G E  N ++ +  ELK+   GY   Q +ENLS
Sbjct: 121 SLSMTGAPSFRLPIAVPCGFDEFNATKVGHESSNLLKFNAHELKQIPAGYRQPQPIENLS 180

Query: 74  VDLGLREQQHNVPEYSGLMPIAPP 3
             L L    H V  +  L  +A P
Sbjct: 181 SALPL---AHGVQGFQFLSNVAVP 201


>emb|CBI16556.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 18/126 (14%)
 Frame = -2

Query: 398 IKNVVNREDSNLPDDQSLTSAFTQLNFKDGLAIGETSPRLINYKTLPNCTILDSGRTAIP 219
           +   +  E+ +LPDD    SAF +L+FKDG+ +      L+NYK LPN TIL  G+    
Sbjct: 80  VNKSIESEEPSLPDDHLWISAFAELSFKDGVRMEAVCSPLVNYKALPNQTILFQGQCPNS 139

Query: 218 SPRSPNSLNGMTFI-------NPTSNGLEKFNVELSGQ-----------ELKKQKPGYCQ 93
             R+ ++L+    +       NP S+    F+V+ + Q           ELKKQ+ G   
Sbjct: 140 LKRTSSNLDPQVMVVPSSQSPNPPSSAFNNFDVKNNSQESSNLLKLNVPELKKQQFGNYP 199

Query: 92  SLENLS 75
            +EN S
Sbjct: 200 PIENFS 205


>emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]
          Length = 1051

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 18/126 (14%)
 Frame = -2

Query: 398 IKNVVNREDSNLPDDQSLTSAFTQLNFKDGLAIGETSPRLINYKTLPNCTILDSGRTAIP 219
           +   +  E+ +LPDDQ   SAF +L+FKDG+ +      L+NYK LPN TIL  G+    
Sbjct: 80  VNKSIESEEPSLPDDQLWISAFAELSFKDGVRMEAVCSPLVNYKALPNQTILFQGQCPNS 139

Query: 218 SPRSPNSLNGMTFI-------NPTSNGLEKFNVELSGQ-----------ELKKQKPGYCQ 93
             R+ ++L+    +       NP S+    F+V+ + Q           ELKKQ+ G   
Sbjct: 140 LKRTSSNLDPQVMVVPSSQSPNPPSSXFNNFDVKNNSQESSNLLKLNVPELKKQQFGNYP 199

Query: 92  SLENLS 75
            +E  S
Sbjct: 200 PIEXFS 205


>ref|XP_006368531.1| hypothetical protein POPTR_0001s03990g [Populus trichocarpa]
           gi|550346467|gb|ERP65100.1| hypothetical protein
           POPTR_0001s03990g [Populus trichocarpa]
          Length = 756

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 47/131 (35%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
 Frame = -2

Query: 446 NLDGATTTVKNDHQSPIKNVVNREDSNLPDDQSLTSAFTQLNFKDGLAIGETSPRLINYK 267
           +LD          QSP  N  + E++NLPDDQSLT AF +L+F  G      SP L NYK
Sbjct: 65  SLDDRQILANKTQQSPTTNAQS-EEANLPDDQSLTLAFAELSFNSG------SP-LANYK 116

Query: 266 TLPNCTI-----------LDSGRTAIPSPRSPNSL-NGMTFINPTSNGLEKFN-VELSGQ 126
           +LPN ++            DS   A P  +SPN+L +G    N      E+ N ++   +
Sbjct: 117 SLPNPSVYTNTMNSSLSNTDSSTMAAPPYQSPNNLPSGFDKFNAVKVCHEQSNFIKFDAR 176

Query: 125 ELKKQKPGYCQ 93
           E KK    +CQ
Sbjct: 177 EQKKVPTDFCQ 187


>ref|XP_006386043.1| hypothetical protein POPTR_0003s20880g [Populus trichocarpa]
           gi|550343665|gb|ERP63840.1| hypothetical protein
           POPTR_0003s20880g [Populus trichocarpa]
          Length = 755

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 52/154 (33%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
 Frame = -2

Query: 416 NDHQSPIKNVVNREDSNLPDDQSLTSAFTQLNFKDG--LAIGETSPRLINYKTLPNCTIL 243
           N  Q PIKN+ + +++NLPDDQSLTSAF +L+F  G  L   ++ P    Y    N ++ 
Sbjct: 75  NTQQYPIKNLQS-DEANLPDDQSLTSAFAELSFNSGSPLVNCKSPPNPAVYTNTMNGSLS 133

Query: 242 DSGRTAIPSP--RSPNSLNGMTFINPTSNGLEKFNVELSGQELK----------KQKPGY 99
           +   T + SP  RSPN+L          +G +KFNV   GQE            K    +
Sbjct: 134 NMDSTVMVSPLFRSPNNL---------PSGFDKFNVVKVGQEQSNFLKFDARQLKVPADF 184

Query: 98  C--QSLENLSVDLGLREQQHNVPEYSGLMPIAPP 3
           C  Q +EN S  L      H +  +  L  +A P
Sbjct: 185 CQPQPIENFSTAL---SPTHGMQGFQLLSNVAVP 215


>ref|XP_002276886.1| PREDICTED: uncharacterized protein LOC100250413 [Vitis vinifera]
          Length = 815

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/107 (32%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
 Frame = -2

Query: 443 LDGATTTVKNDHQSPIKNVVNREDSNLPDDQSLTSAFTQLNFKDGLAIGETSPRLINYKT 264
           LDG    ++ DHQ+PIK ++++E+SNLP +QSL+S+  +L+FK   AI   + + +++  
Sbjct: 84  LDGDRLGLEGDHQTPIK-IMDQEESNLPSEQSLSSSLAELSFKGEEAIKAANSQRLDHTF 142

Query: 263 LPNCTILDSGRTAIP-SPRSPNSLNGMTFINPTSNGLEKFNVELSGQ 126
           L +    +  + ++P SP+S + L      +   N  ++FNVE++G+
Sbjct: 143 LLDDQFANLLKDSLPLSPQSHSILTRTNTEDIPPNRFDQFNVEMNGK 189


>emb|CAN81897.1| hypothetical protein VITISV_009053 [Vitis vinifera]
          Length = 815

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/107 (32%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
 Frame = -2

Query: 443 LDGATTTVKNDHQSPIKNVVNREDSNLPDDQSLTSAFTQLNFKDGLAIGETSPRLINYKT 264
           LDG    ++ DHQ+PIK ++++E+SNLP +QSL+S+  +L+FK   AI   + + +++  
Sbjct: 84  LDGDRLGLEGDHQTPIK-IMDQEESNLPSEQSLSSSLAELSFKGEEAIKAANSQRLDHTF 142

Query: 263 LPNCTILDSGRTAIP-SPRSPNSLNGMTFINPTSNGLEKFNVELSGQ 126
           L +    +  + ++P SP+S + L      +   N  ++FNVE++G+
Sbjct: 143 LLDDQFANLLKDSLPLSPQSHSILTRTNTEDIPPNRFDQFNVEMNGK 189


>ref|XP_004294948.1| PREDICTED: pumilio homolog 12-like [Fragaria vesca subsp. vesca]
          Length = 752

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 42/110 (38%), Positives = 51/110 (46%)
 Frame = -2

Query: 443 LDGATTTVKNDHQSPIKNVVNREDSNLPDDQSLTSAFTQLNFKDGLAIGETSPRLINYKT 264
           LD    +VK   +SP K V   E SNLPDD SLTSAF  L+F DG       P+L N  T
Sbjct: 66  LDEGKNSVKKIQKSPAKRVQPAEVSNLPDDHSLTSAFAGLSFDDGQIPNSFKPQLPNMDT 125

Query: 263 LPNCTILDSGRTAIPSPRSPNSLNGMTFINPTSNGLEKFNVELSGQELKK 114
           L       +  T IP         G    + T+ G E  N+    +ELKK
Sbjct: 126 LMVVPPFQAA-TGIPC--------GFYEFDVTNIGQESSNMSKYSEELKK 166


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