BLASTX nr result
ID: Akebia24_contig00039813
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00039813
(601 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004516035.1| PREDICTED: uncharacterized protein LOC101492... 85 1e-14
ref|NP_194047.2| cysteine-rich receptor-like protein kinase 8 [A... 84 2e-14
emb|CAA18463.1| putative protein [Arabidopsis thaliana] gi|72691... 84 2e-14
gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa] 82 9e-14
gb|AFN88207.1| integrase core domain containing protein [Phaseol... 76 2e-13
gb|AHL77759.1| polyprotein [Prunus persica] 81 3e-13
gb|AFB73911.1| polyprotein [Citrus sinensis] 73 3e-13
emb|CAN80961.1| hypothetical protein VITISV_021825 [Vitis vinifera] 75 3e-13
gb|EMT12132.1| Eukaryotic translation initiation factor 3 subuni... 80 6e-13
gb|AFB73912.1| polyprotein [Citrus sinensis] 72 9e-13
emb|CAN73953.1| hypothetical protein VITISV_025588 [Vitis vinifera] 69 9e-13
gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr... 77 4e-12
emb|CAN80368.1| hypothetical protein VITISV_014720 [Vitis vinifera] 67 7e-12
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ... 75 1e-11
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 75 1e-11
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 58 3e-11
gb|ABA93790.1| retrotransposon protein, putative, Ty1-copia subc... 74 3e-11
gb|ABF96637.1| retrotransposon protein, putative, Ty1-copia subc... 74 3e-11
gb|AAR01692.1| putative gag and pol polyprotein [Oryza sativa Ja... 74 3e-11
gb|AAP44618.1| putative polyprotein [Oryza sativa Japonica Group] 74 3e-11
>ref|XP_004516035.1| PREDICTED: uncharacterized protein LOC101492305, partial [Cicer
arietinum]
Length = 1216
Score = 85.1 bits (209), Expect = 1e-14
Identities = 59/145 (40%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Frame = +1
Query: 169 WEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T* 348
W K +NG + +YKA LVAK YTQ E +DY+ETFSPV + +I +L
Sbjct: 366 WIFKTKRDSNGNVE--RYKARLVAKGYTQKEGIDYKETFSPVSSKDSLRIIMALVAHFDL 423
Query: 349 ELFQIDVKTAFF---L*VRLDGISQWRFGLKDPYGLVYRL*SRMR*AQSL*A*KSIYGLK 519
EL Q+DVKTAF + + + F L+DP +V +L KSIYGLK
Sbjct: 424 ELHQMDVKTAFLNGDIDETIYMVQPENFVLEDPKNMVCKL------------RKSIYGLK 471
Query: 520 QSSRQ*YFRFHRAITTNGFTMMEED 594
Q+SRQ Y +FH+ I + GF M D
Sbjct: 472 QASRQWYHKFHQVILSFGFEMNTVD 496
>ref|NP_194047.2| cysteine-rich receptor-like protein kinase 8 [Arabidopsis thaliana]
gi|332659317|gb|AEE84717.1| cysteine-rich receptor-like
protein kinase 8 [Arabidopsis thaliana]
Length = 1262
Score = 84.3 bits (207), Expect = 2e-14
Identities = 58/144 (40%), Positives = 75/144 (52%)
Frame = +1
Query: 166 GWEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T 345
G + YK + N TI +YKA LVAK YTQ E +D+ ETFSPV +LT V LI ++S I
Sbjct: 128 GCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYN 187
Query: 346 *ELFQIDVKTAFFL*VRLDGISQWRFGLKDPYGLVYRL*SRMR*AQSL*A*KSIYGLKQS 525
L Q+D+ AF L+G +K P G R + KSIYGLKQ+
Sbjct: 188 FTLHQLDISNAF-----LNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQA 242
Query: 526 SRQ*YFRFHRAITTNGFTMMEEDH 597
SRQ + +F + GF DH
Sbjct: 243 SRQWFLKFSVTLIGFGFVQSHSDH 266
>emb|CAA18463.1| putative protein [Arabidopsis thaliana] gi|7269163|emb|CAB79271.1|
putative protein [Arabidopsis thaliana]
Length = 1240
Score = 84.3 bits (207), Expect = 2e-14
Identities = 58/144 (40%), Positives = 75/144 (52%)
Frame = +1
Query: 166 GWEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T 345
G + YK + N TI +YKA LVAK YTQ E +D+ ETFSPV +LT V LI ++S I
Sbjct: 128 GCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYN 187
Query: 346 *ELFQIDVKTAFFL*VRLDGISQWRFGLKDPYGLVYRL*SRMR*AQSL*A*KSIYGLKQS 525
L Q+D+ AF L+G +K P G R + KSIYGLKQ+
Sbjct: 188 FTLHQLDISNAF-----LNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQA 242
Query: 526 SRQ*YFRFHRAITTNGFTMMEEDH 597
SRQ + +F + GF DH
Sbjct: 243 SRQWFLKFSVTLIGFGFVQSHSDH 266
>gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa]
Length = 931
Score = 82.4 bits (202), Expect = 9e-14
Identities = 56/141 (39%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
Frame = +1
Query: 166 GWEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T 345
G + +K++ N K I +YKA LV K +TQ + +DY+ETFSPV + + ++ +L
Sbjct: 564 GSKWIFKTKRNSKGNIERYKARLVVKGFTQKDGIDYKETFSPVSKKDSLRIVLALVAHYN 623
Query: 346 *ELFQIDVKTAFFL*VRLDGISQWRFGLKDPYGLV----YRL*SRMR*AQSL*A*KSIYG 513
EL Q+DVKTAF L+G + + P G V L ++R KSIYG
Sbjct: 624 LELHQMDVKTAF-----LNGELEEEVYMDQPEGFVATGNENLVCKLR--------KSIYG 670
Query: 514 LKQSSRQ*YFRFHRAITTNGF 576
LKQ+SRQ YF+F+ IT+ GF
Sbjct: 671 LKQASRQWYFKFNDIITSYGF 691
>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
Length = 1387
Score = 76.3 bits (186), Expect(2) = 2e-13
Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 5/148 (3%)
Frame = +1
Query: 169 WEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T* 348
W + K +G TI + KA LVAK YTQI +DY +TFSPV ++ V L +++ +
Sbjct: 921 WVFAIKVGPDG--TIDRLKARLVAKGYTQIFGLDYGDTFSPVAKMASVRLFIAMAALQQW 978
Query: 349 ELFQIDVKTAFFL*VRLDGISQWRFGLKDPYGLVYR-----L*SRMR*AQSL*A*KSIYG 513
L+Q+DVK AF L+G Q ++ P G V + L R+R KS+YG
Sbjct: 979 PLYQLDVKNAF-----LNGDLQEEIYMEQPPGFVAQGESSGLVCRLR--------KSLYG 1025
Query: 514 LKQSSRQ*YFRFHRAITTNGFTMMEEDH 597
LKQS R + +F + G T E DH
Sbjct: 1026 LKQSPRAWFGKFSNVVQQFGMTRSEADH 1053
Score = 25.0 bits (53), Expect(2) = 2e-13
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 35 PRNY*EMLSSPAFKE*MPII*DELNLIMKNHV*ELVDLPPR 157
P++ + L+ P +++ M DE+N + N ELV LP R
Sbjct: 876 PKSVGDALAHPGWRQAML---DEMNALQNNGTWELVPLPSR 913
>gb|AHL77759.1| polyprotein [Prunus persica]
Length = 1363
Score = 80.9 bits (198), Expect = 3e-13
Identities = 56/141 (39%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Frame = +1
Query: 166 GWEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T 345
G + YK++ N K I +YKA LVAK +TQ E VDY ETFSPV + +I +L +
Sbjct: 885 GCKWVYKTKRNSKGQIDRYKARLVAKGFTQQEGVDYNETFSPVSTKDSLRVIMALVALFD 944
Query: 346 *ELFQIDVKTAFFL*VRLDGISQWRFGLKDPYGLVYR----L*SRMR*AQSL*A*KSIYG 513
L Q+DVKTAF L+G +K P G + + L +++ KSIYG
Sbjct: 945 LHLHQMDVKTAF-----LNGNLIEEIYMKQPDGFIQKGEEDLVCKLQ--------KSIYG 991
Query: 514 LKQSSRQ*YFRFHRAITTNGF 576
LKQ+SRQ Y +F + + GF
Sbjct: 992 LKQASRQWYLKFDEVVKSQGF 1012
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 73.2 bits (178), Expect(2) = 3e-13
Identities = 51/143 (35%), Positives = 71/143 (49%), Gaps = 4/143 (2%)
Frame = +1
Query: 181 YKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T*ELFQ 360
YK + +G + +Y+A LV K Y Q E +D+ E FSPVVRLT V ++ ++ L Q
Sbjct: 842 YKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRIVLAMCATFDLHLEQ 901
Query: 361 IDVKTAFFL*VRLDGISQWRFGLKDPYGLV----YRL*SRMR*AQSL*A*KSIYGLKQSS 528
+DVKTAF L G + + P G L R+ KS+YGLKQ+
Sbjct: 902 LDVKTAF-----LHGELEEEIYMLQPEGFAETGKENLVCRLN--------KSLYGLKQAP 948
Query: 529 RQ*YFRFHRAITTNGFTMMEEDH 597
R Y RF I + G+ + DH
Sbjct: 949 RYWYKRFDSFIMSLGYNRLSSDH 971
Score = 27.7 bits (60), Expect(2) = 3e-13
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 26 DGEPRNY*EMLSSPAFKE*MPII*DELNLIMKNHV*ELVDLP 151
DGEP + E L+S M + +E+ + KN ELV LP
Sbjct: 789 DGEPSTFHEALNSSDVALWMTAMQEEIEALHKNKTWELVPLP 830
>emb|CAN80961.1| hypothetical protein VITISV_021825 [Vitis vinifera]
Length = 849
Score = 75.1 bits (183), Expect(2) = 3e-13
Identities = 54/141 (38%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
Frame = +1
Query: 166 GWEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T 345
G + +K++ + I +YKA LV K Y+Q E +D++ETFSPV +I ++
Sbjct: 431 GCKWVFKTKCDSSWKIERYKARLVVKGYSQREGIDFKETFSPVSTKDSFRVIMAIVAHFD 490
Query: 346 *ELFQIDVKTAFFL*VRLDGISQWRFGLKDPYGLV----YRL*SRMR*AQSL*A*KSIYG 513
EL Q+DVKTAF L+G ++ P G V L ++ KSIYG
Sbjct: 491 LELHQMDVKTAF-----LNGDLDEEVYIEQPTGFVEIGKEDLVCKLN--------KSIYG 537
Query: 514 LKQSSRQ*YFRFHRAITTNGF 576
LKQ+SRQ Y +F R IT NGF
Sbjct: 538 LKQASRQWYLKFDRIITQNGF 558
Score = 25.8 bits (55), Expect(2) = 3e-13
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 32 EPRNY*EMLSSPAFKE*MPII*DELNLIMKNHV*ELVDLP 151
+P Y E + P F + DE+N + N V +LV+LP
Sbjct: 385 DPVTYQEAIHCPQFISWKEAMNDEMNSMYMNGVWDLVELP 424
>gb|EMT12132.1| Eukaryotic translation initiation factor 3 subunit A [Aegilops
tauschii]
Length = 2007
Score = 79.7 bits (195), Expect = 6e-13
Identities = 57/144 (39%), Positives = 77/144 (53%)
Frame = +1
Query: 166 GWEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T 345
G + YK + K+ I KYKA LVAK +TQ E +DY ETFSPV +I +L
Sbjct: 1001 GCKWVYKIKYESKVNIEKYKARLVAKGFTQREGIDYNETFSPVSCKDSFRIIMALVAHFD 1060
Query: 346 *ELFQIDVKTAFFL*VRLDGISQWRFGLKDPYGLVYRL*SRMR*AQSL*A*KSIYGLKQS 525
EL Q+DVKTAF L+G + + +K P G + M KSIYGL+Q+
Sbjct: 1061 LELHQMDVKTAF-----LNGDLKEKVYMKQPKGFIMEGKENMGCCLK----KSIYGLRQA 1111
Query: 526 SRQ*YFRFHRAITTNGFTMMEEDH 597
S Q Y +F++ I + GF ED+
Sbjct: 1112 SWQCYLKFNQTIKSFGFKENIEDN 1135
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 72.4 bits (176), Expect(2) = 9e-13
Identities = 51/143 (35%), Positives = 71/143 (49%), Gaps = 4/143 (2%)
Frame = +1
Query: 181 YKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T*ELFQ 360
YK + +G + +Y+A LV K Y Q E +D+ E FSPVVRLT V ++ ++ L Q
Sbjct: 842 YKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRIVLAMCATFDLHLEQ 901
Query: 361 IDVKTAFFL*VRLDGISQWRFGLKDPYGLV----YRL*SRMR*AQSL*A*KSIYGLKQSS 528
+DVKTAF L G + + P G L R+ KS+YGLKQ+
Sbjct: 902 LDVKTAF-----LHGELEEEIYMLQPEGFAETGKENLVCRLN--------KSLYGLKQAP 948
Query: 529 RQ*YFRFHRAITTNGFTMMEEDH 597
R Y RF I + G+ + DH
Sbjct: 949 RCWYKRFDSFIMSLGYNRLSSDH 971
Score = 26.9 bits (58), Expect(2) = 9e-13
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 26 DGEPRNY*EMLSSPAFKE*MPII*DELNLIMKNHV*ELVDLP 151
DGEP + E L+S M + +E+ + KN ELV LP
Sbjct: 789 DGEPSTFHEALNSLDVALWMTAMQEEIEALHKNKTWELVPLP 830
>emb|CAN73953.1| hypothetical protein VITISV_025588 [Vitis vinifera]
Length = 715
Score = 69.3 bits (168), Expect(2) = 9e-13
Identities = 47/143 (32%), Positives = 72/143 (50%)
Frame = +1
Query: 169 WEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T* 348
W KS+ +G ++ +YKA LVAK +TQ +DY+ETF+PV ++ + ++ SL+
Sbjct: 402 WVFRIKSKADG--SVERYKARLVAKGFTQTYGIDYQETFAPVAKINSIRVLLSLAVNSNW 459
Query: 349 ELFQIDVKTAFFL*VRLDGISQWRFGLKDPYGLVYRL*SRMR*AQSL*A*KSIYGLKQSS 528
L Q+DVK F L+G + + P G + KS+YGLKQS
Sbjct: 460 PLHQLDVKNVF-----LNGDLEEEVFMSPPPGFE----ESFGVGKMCKLKKSLYGLKQSP 510
Query: 529 RQ*YFRFHRAITTNGFTMMEEDH 597
R + F + I G+T + DH
Sbjct: 511 RAWFEHFDKVIKHYGYTQSQADH 533
Score = 30.0 bits (66), Expect(2) = 9e-13
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 35 PRNY*EMLSSPAFKE*MPII*DELNLIMKNHV*ELVDLP 151
PRN E L P++K + +E+N + KN + E+VDLP
Sbjct: 357 PRNIQEALDEPSWKL---TVFEEMNALKKNGILEVVDLP 392
>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 1034
Score = 77.0 bits (188), Expect = 4e-12
Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Frame = +1
Query: 169 WEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T* 348
W K + +G TI K+KA LV + + Q E +DY +T++PVVR++ + L+ L+ I
Sbjct: 806 WIFKKKIKVDG--TIDKFKARLVVQGFRQKEGIDYFDTYAPVVRISSIRLLIGLASIHNL 863
Query: 349 ELFQIDVKTAFFL*VRLDGISQWRFGLKDPYGLV-----YRL*SRMR*AQSL*A*KSIYG 513
+ Q+DVKTAF L+G+ + +K P G V +++ + KS+YG
Sbjct: 864 VIHQMDVKTAF-----LNGVLEEEVYMKQPEGFVMPGNEHKVCKLV---------KSLYG 909
Query: 514 LKQSSRQ*YFRFHRAITTNGFTMMEED 594
LKQ+ +Q + RF A+ +NGF + + D
Sbjct: 910 LKQAPKQWHQRFDEAVLSNGFELNQSD 936
>emb|CAN80368.1| hypothetical protein VITISV_014720 [Vitis vinifera]
Length = 869
Score = 67.4 bits (163), Expect(2) = 7e-12
Identities = 46/143 (32%), Positives = 72/143 (50%)
Frame = +1
Query: 169 WEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T* 348
W KS+ +G ++ +YKA LVAK +TQ +DY+ETF+P+ ++ + ++ SL+
Sbjct: 443 WVFMIKSKADG--SVERYKARLVAKGFTQTYGIDYQETFAPIAKINSIRILLSLAINSNW 500
Query: 349 ELFQIDVKTAFFL*VRLDGISQWRFGLKDPYGLVYRL*SRMR*AQSL*A*KSIYGLKQSS 528
L Q+DVK AF L+G L++ +S+YGLKQS
Sbjct: 501 PLHQLDVKNAF-----LNG------DLEE---------------------ESLYGLKQSP 528
Query: 529 RQ*YFRFHRAITTNGFTMMEEDH 597
R + RF + I G+T + DH
Sbjct: 529 RAWFERFGKVINHYGYTQSQADH 551
Score = 28.9 bits (63), Expect(2) = 7e-12
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 35 PRNY*EMLSSPAFKE*MPII*DELNLIMKNHV*ELVDLP 151
PRN E L P++K + +E+N + KN E+VDLP
Sbjct: 398 PRNIQEALDEPSWKL---AVFEEMNALKKNGTWEVVDLP 433
>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
Length = 1309
Score = 75.5 bits (184), Expect = 1e-11
Identities = 52/142 (36%), Positives = 81/142 (57%)
Frame = +1
Query: 169 WEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T* 348
W K + +G TI KYKA LVAK +TQ ++ DY +T+SPV RL + ++ +L+
Sbjct: 846 WIFRRKRRPDG--TIEKYKARLVAKGFTQKKEEDYFDTYSPVARLPTIRVLLALAAAYKL 903
Query: 349 ELFQIDVKTAFFL*VRLDGISQWRFGLKDPYGLVYRL*SRMR*AQSL*A*KSIYGLKQSS 528
+ Q+DVKTAF L+G + ++ P G V + + ++ KS+YGLKQ+
Sbjct: 904 LVHQMDVKTAF-----LNGELEEEIYMQQPEGFVV----KGQESKVCRLIKSLYGLKQAP 954
Query: 529 RQ*YFRFHRAITTNGFTMMEED 594
RQ + +F+ +TT GF + E D
Sbjct: 955 RQWHEKFNNTLTTAGFCVNEAD 976
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 75.5 bits (184), Expect = 1e-11
Identities = 53/144 (36%), Positives = 77/144 (53%)
Frame = +1
Query: 166 GWEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T 345
G + YK + N TI +YKA LVAK ++Q+E +DY ETF+PV +LT V ++ SL+ I
Sbjct: 1011 GCKWVYKIKYNPDGTIERYKARLVAKGFSQVEGIDYRETFAPVAKLTTVRVLLSLASIQG 1070
Query: 346 *ELFQIDVKTAFFL*VRLDGISQWRFGLKDPYGLVYRL*SRMR*AQSL*A*KSIYGLKQS 525
L Q+DV AF L+G ++ P G + R+ KS+YGLKQ+
Sbjct: 1071 WHLHQLDVNNAF-----LNGDLYEDVYMQLPPGFGRKGEHRVCKLH-----KSLYGLKQA 1120
Query: 526 SRQ*YFRFHRAITTNGFTMMEEDH 597
SRQ + + A+ GF D+
Sbjct: 1121 SRQWFLKLSSALKAAGFKQSWSDY 1144
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 58.2 bits (139), Expect(2) = 3e-11
Identities = 41/142 (28%), Positives = 73/142 (51%)
Frame = +1
Query: 169 WEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T* 348
W K + +G +I KYKA LV K Y Q E +DY +T+SPV R+ + ++ +++ +
Sbjct: 862 WIFKRKMKVDG--SIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLAIAALRNL 919
Query: 349 ELFQIDVKTAFFL*VRLDGISQWRFGLKDPYGLVYRL*SRMR*AQSL*A*KSIYGLKQSS 528
E+ Q+D+K + ++ P G + + + L KS+YGLKQ+
Sbjct: 920 EIHQMDMKEIY---------------MEQPEG--FSAPGQEKKVCKL--VKSLYGLKQAP 960
Query: 529 RQ*YFRFHRAITTNGFTMMEED 594
+Q + +F + ++GF + E D
Sbjct: 961 KQWHEKFDNVMLSHGFKINECD 982
Score = 36.2 bits (82), Expect(2) = 3e-11
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +2
Query: 8 FMFTLIDGEPRNY*EMLSSPAFKE*MPII*DELNLIMKNHV*ELVDLPP 154
F+ +++GEP+ + E ++S I E++ I++NH ELVDLPP
Sbjct: 805 FLTFMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPP 853
>gb|ABA93790.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1370
Score = 73.9 bits (180), Expect = 3e-11
Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Frame = +1
Query: 169 WEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T* 348
W K + +G TI KYKA LVAK YTQ E D+ +T+SPV RLT + ++ +L
Sbjct: 906 WVFKKKLRPDG--TIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTMIRVLLALVASHGL 963
Query: 349 ELFQIDVKTAFFL*VRLDGISQWR---FGLKDPYGLVYRL*SRMR*AQSL*A*KSIYGLK 519
+ Q+DVKTAF + I + +GL+ G+V +L KS+YGLK
Sbjct: 964 LVHQMDVKTAFLNGELEEEIYMDQPDGYGLEGQKGMVCKL------------LKSLYGLK 1011
Query: 520 QSSRQ*YFRFHRAITTNGFTMMEED 594
Q+ +Q + +F +T+ GF + E+D
Sbjct: 1012 QAPKQWHEKFDNTLTSAGFVVNEDD 1036
>gb|ABF96637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1543
Score = 73.9 bits (180), Expect = 3e-11
Identities = 55/142 (38%), Positives = 79/142 (55%)
Frame = +1
Query: 169 WEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T* 348
W K + +G TI KYKA LVAK YTQ E D+ +T+SPV RLT + ++ +L+
Sbjct: 1205 WVFKKKLRPDG--TIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGL 1262
Query: 349 ELFQIDVKTAFFL*VRLDGISQWRFGLKDPYGLVYRL*SRMR*AQSL*A*KSIYGLKQSS 528
+ Q+DVKTAF L+G + + P G V RM + L KS+YGLKQ+
Sbjct: 1263 LVHQMDVKTAF-----LNGELEEEIYMDQPDGYVLEGQERMV-CKLL---KSLYGLKQAP 1313
Query: 529 RQ*YFRFHRAITTNGFTMMEED 594
+Q + +F +T+ GF + E D
Sbjct: 1314 KQWHEKFDTTLTSVGFVVNEVD 1335
>gb|AAR01692.1| putative gag and pol polyprotein [Oryza sativa Japonica Group]
Length = 1427
Score = 73.9 bits (180), Expect = 3e-11
Identities = 55/142 (38%), Positives = 79/142 (55%)
Frame = +1
Query: 169 WEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T* 348
W K + +G TI KYKA LVAK YTQ E D+ +T+SPV RLT + ++ +L+
Sbjct: 1089 WVFKKKLRPDG--TIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGL 1146
Query: 349 ELFQIDVKTAFFL*VRLDGISQWRFGLKDPYGLVYRL*SRMR*AQSL*A*KSIYGLKQSS 528
+ Q+DVKTAF L+G + + P G V RM + L KS+YGLKQ+
Sbjct: 1147 LVHQMDVKTAF-----LNGELEEEIYMDQPDGYVLEGQERMV-CKLL---KSLYGLKQAP 1197
Query: 529 RQ*YFRFHRAITTNGFTMMEED 594
+Q + +F +T+ GF + E D
Sbjct: 1198 KQWHEKFDTTLTSVGFVVNEVD 1219
>gb|AAP44618.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1494
Score = 73.9 bits (180), Expect = 3e-11
Identities = 55/142 (38%), Positives = 79/142 (55%)
Frame = +1
Query: 169 WEMSYKSQTNGKLTIFKYKAHLVAKAYTQIEDVDYEETFSPVVRLTFVHLI*SLSHI*T* 348
W K + +G TI KYKA LVAK YTQ E D+ +T+SPV RLT + ++ +L+
Sbjct: 1156 WVFKKKLRPDG--TIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGL 1213
Query: 349 ELFQIDVKTAFFL*VRLDGISQWRFGLKDPYGLVYRL*SRMR*AQSL*A*KSIYGLKQSS 528
+ Q+DVKTAF L+G + + P G V RM + L KS+YGLKQ+
Sbjct: 1214 LVHQMDVKTAF-----LNGELEEEIYMDQPDGYVLEGQERMV-CKLL---KSLYGLKQAP 1264
Query: 529 RQ*YFRFHRAITTNGFTMMEED 594
+Q + +F +T+ GF + E D
Sbjct: 1265 KQWHEKFDTTLTSVGFVVNEVD 1286