BLASTX nr result

ID: Akebia24_contig00038843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00038843
         (231 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]      47   6e-06

>gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]
          Length = 1413

 Score = 47.4 bits (111), Expect(2) = 6e-06
 Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 6/51 (11%)
 Frame = -1

Query: 147  INDELRENRLR*FGHVR*RPPTVLVRSW------NSKRTRGRLKKLWIEVV 13
            I D++RE RLR FGHV+ RP    VR+W      N++R RGRL+  W E++
Sbjct: 1018 IEDKVREGRLRWFGHVQRRPLEAPVRAWEDILIPNTRRGRGRLRITWTEIL 1068



 Score = 28.1 bits (61), Expect(2) = 6e-06
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -2

Query: 230  RMLSWMSG*TKIYKIRIENIHDSLGI 153
            RML WMSG T++ +I+ E I   +G+
Sbjct: 990  RMLRWMSGQTRMDRIKNEVIRSKVGV 1015


Top