BLASTX nr result

ID: Akebia24_contig00038798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00038798
         (1277 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35966.3| unnamed protein product [Vitis vinifera]              623   e-176
gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]        377   e-102
ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [S...   377   e-102
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...   374   e-101
ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containi...   369   2e-99
ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containi...   368   3e-99
ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containi...   366   1e-98
ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfam...   365   2e-98
gb|EMT27117.1| hypothetical protein F775_08942 [Aegilops tauschii]    365   3e-98
ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi...   363   9e-98
ref|XP_004304765.1| PREDICTED: pentatricopeptide repeat-containi...   363   1e-97
ref|XP_007014360.1| Pentatricopeptide repeat superfamily protein...   359   1e-96
ref|XP_007014358.1| Pentatricopeptide repeat superfamily protein...   359   1e-96
ref|XP_007014357.1| Pentatricopeptide repeat superfamily protein...   359   1e-96
ref|XP_007206274.1| hypothetical protein PRUPE_ppa016070mg [Prun...   359   2e-96
ref|XP_006380676.1| hypothetical protein POPTR_0007s10370g [Popu...   358   3e-96
ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citr...   357   6e-96
ref|XP_007047423.1| Tetratricopeptide repeat (TPR)-like superfam...   356   1e-95
ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containi...   355   2e-95
ref|XP_007030476.1| Tetratricopeptide repeat-like superfamily pr...   355   2e-95

>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  623 bits (1606), Expect = e-176
 Identities = 306/419 (73%), Positives = 356/419 (84%)
 Frame = +3

Query: 3    NLVEMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAIL 182
            + VEML LF QMLVSAD V+PNAATMV            ++GR++SVFIDVN IPLN IL
Sbjct: 206  DFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTIL 265

Query: 183  NTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSV 362
             TALIDMYSKCGDVEKA R+FD +SCKNL SWNA+ITG VQ G+LEEAI L+  M+A+SV
Sbjct: 266  VTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSV 325

Query: 363  RPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACL 542
            +PNEIT+VNVLSACAGLGAL+LGREVHLYLGRNGLDLNVILAT+LVDMY+KCG IDDACL
Sbjct: 326  KPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACL 385

Query: 543  VFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRL 722
            +FVK + KDVA  NAMILGLA+HG+GRDSLA+ +QM + G  PND+TFIGVLSACNHS L
Sbjct: 386  IFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGL 445

Query: 723  VEEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALL 902
            VEEGRVQFS+M  K GLSPK+EHYACMVDLLGRAG+L EA ELVQNM++ PDSIIWGALL
Sbjct: 446  VEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALL 505

Query: 903  SACRIHRNVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERGVKK 1082
            SACRIHRN++LADKI + I++SQDPN+GFCILLSNIYAS GRWKDVARVRR V+E+ +KK
Sbjct: 506  SACRIHRNLELADKISETIMASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKK 565

Query: 1083 PYGCSWIEIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPNFDFVLKNIDGM 1259
            P GCSW+E+D +VHRF+ EDTTHL+S EIY  ++ L   +K EGYV NFDF+  NI+GM
Sbjct: 566  PSGCSWVEVDGVVHRFVVEDTTHLKSGEIYGAYEILVNHLKAEGYVANFDFIANNINGM 624



 Score =  139 bits (349), Expect = 3e-30
 Identities = 86/247 (34%), Positives = 136/247 (55%), Gaps = 3/247 (1%)
 Frame = +3

Query: 189 ALIDMYSKCGDVEKARRLFDEISCK-NLVSWNAMITGYVQRGMLEEAIQLF--YLMQAKS 359
           ++I  Y + G VEKAR LF+E+  + N+V W AMI GY + G   E + LF   L+ A  
Sbjct: 164 SIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADE 223

Query: 360 VRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDAC 539
           V+PN  TMV +LSAC+ L   ++GR + +++  N + LN IL T+L+DMYSKCG ++ A 
Sbjct: 224 VQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAW 283

Query: 540 LVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSR 719
            +F  ++ K++   NA+I G    G   +++ +   M+     PN+IT + VLSAC    
Sbjct: 284 RIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLG 343

Query: 720 LVEEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGAL 899
            +E GR +    + + GL   V     +VD+  + G +D+A  L+       D  +W A+
Sbjct: 344 ALELGR-EVHLYLGRNGLDLNVILATALVDMYAKCGKIDDAC-LIFVKTSEKDVALWNAM 401

Query: 900 LSACRIH 920
           +     H
Sbjct: 402 ILGLAYH 408



 Score = 87.0 bits (214), Expect = 2e-14
 Identities = 78/308 (25%), Positives = 131/308 (42%), Gaps = 6/308 (1%)
 Frame = +3

Query: 153  VNAIPLNAILNTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQ 332
            ++ +PL   L   LID++S    ++ AR + D+       SWN++I  Y   G  + ++ 
Sbjct: 24   IHGLPLQTHLIPKLIDLHS----IDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLF 79

Query: 333  LFYLMQAKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYS 512
            L+  M   S +P+  T   VL AC+ LG++  G ++H ++ R G   ++ +  SL+DMY 
Sbjct: 80   LYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYC 139

Query: 513  KCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIG 692
            KC  +D A   +  M  +D    N++I G    G                          
Sbjct: 140  KCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQ------------------------- 174

Query: 693  VLSACNHSRLVEEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVS 872
                      VE+ R  F  M M+      V  +  M++  G+ G   E + L + M+VS
Sbjct: 175  ----------VEKARDLFEEMPMR----RNVVCWTAMINGYGKEGDFVEMLSLFRQMLVS 220

Query: 873  PDSIIWGA-----LLSACRIHRNVDLADKIGDLILSSQDP-NLGFCILLSNIYASVGRWK 1034
             D +   A     LLSAC    N ++   +   I  ++ P N      L ++Y+  G   
Sbjct: 221  ADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCG--- 277

Query: 1035 DVARVRRL 1058
            DV +  R+
Sbjct: 278  DVEKAWRI 285


>gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  377 bits (968), Expect = e-102
 Identities = 191/407 (46%), Positives = 270/407 (66%)
 Frame = +3

Query: 6    LVEMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILN 185
            +VEM    L++ V+ D V     T+V            K+G+WV+  +D   +  N  L 
Sbjct: 205  VVEMFKGMLEVGVAFDEV-----TLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLV 259

Query: 186  TALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVR 365
            TAL+DMY+KCG++ KARRLFD +  +++V+W+AMI+GY Q     EA+ LF  MQ   V 
Sbjct: 260  TALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVE 319

Query: 366  PNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLV 545
            PN++TMV+VLSACA LGAL+ G+ VH Y+ R  L L  IL T+LVD Y+KCG IDDA   
Sbjct: 320  PNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEA 379

Query: 546  FVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLV 725
            F  M  K+     A+I G+A +G GR++L + + M + G +P D+TFIGVL AC+HS LV
Sbjct: 380  FESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLV 439

Query: 726  EEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLS 905
            EEGR  F +M   +G+ P+VEHY CMVDLLGRAG +DEA + ++ M + P+++IW ALLS
Sbjct: 440  EEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLS 499

Query: 906  ACRIHRNVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERGVKKP 1085
            +C +HRNV + ++    I+S    + G  +LLSNIYAS G+WKD A VR+ +++RG++K 
Sbjct: 500  SCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKT 559

Query: 1086 YGCSWIEIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPN 1226
             GCS IE+D +V  F AED+ H + +EIY+  + +  ++KV GYVPN
Sbjct: 560  PGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPN 606



 Score =  154 bits (388), Expect = 1e-34
 Identities = 96/297 (32%), Positives = 155/297 (52%)
 Frame = +3

Query: 12  EMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILNTA 191
           + L LF++ML +A     +  T               +GR V  +     +  +  + ++
Sbjct: 101 DALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSS 160

Query: 192 LIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPN 371
           LI MY+ CGDV  AR +FD      +V WNA++  Y++ G   E +++F  M    V  +
Sbjct: 161 LIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFD 220

Query: 372 EITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFV 551
           E+T+V+V++AC  +G  KLG+ V  ++   GL  N  L T+L+DMY+KCG I  A  +F 
Sbjct: 221 EVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFD 280

Query: 552 KMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEE 731
            M ++DV   +AMI G       R++L + ++M+    +PND+T + VLSAC     +E 
Sbjct: 281 GMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALET 340

Query: 732 GRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALL 902
           G+   S  V +  LS        +VD   + G +D+AVE  ++M V  +S  W AL+
Sbjct: 341 GKWVHS-YVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVK-NSWTWTALI 395


>ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
            gi|241939236|gb|EES12381.1| hypothetical protein
            SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  377 bits (968), Expect = e-102
 Identities = 189/416 (45%), Positives = 275/416 (66%)
 Frame = +3

Query: 6    LVEMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILN 185
            +VEM    L++ V+ D +     T+V            K+G+WV+ ++D   +  N  L 
Sbjct: 204  VVEMFKGMLEVGVAFDEI-----TLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLM 258

Query: 186  TALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVR 365
            TALIDMY+KCG++ KARRLFD +  +++V+W+AMI+GY Q     EA+ LF  MQ   V 
Sbjct: 259  TALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVE 318

Query: 366  PNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLV 545
            PN++TMV+VLSACA LGAL+ G+ VH Y+ R  L L +IL T+LVD Y+KCG IDDA   
Sbjct: 319  PNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEA 378

Query: 546  FVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLV 725
            F  M  K+     A+I G+A +G GR++L + + M K   +P D+TFIGVL AC+HS LV
Sbjct: 379  FESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLV 438

Query: 726  EEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLS 905
            EEGR  F +M   +G+ P+ EHY C+VDLLGRAG +DEA + ++ M + P+++IW ALLS
Sbjct: 439  EEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLS 498

Query: 906  ACRIHRNVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERGVKKP 1085
            +C +H+NV++ ++    I+S    + G  ILLSNIYASVG+WK+ A +R+ +++RG++K 
Sbjct: 499  SCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKT 558

Query: 1086 YGCSWIEIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPNFDFVLKNID 1253
             GCS IE+D +V  F AED+ H Q +EIY+  + +  ++K+ GY+PN   V   +D
Sbjct: 559  PGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVD 614



 Score =  157 bits (398), Expect = 7e-36
 Identities = 99/297 (33%), Positives = 160/297 (53%)
 Frame = +3

Query: 12  EMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILNTA 191
           + L LF++ML  A V  P+  T+              +GR +  +     +  +  + ++
Sbjct: 101 DALHLFVEMLDVASVC-PDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSS 159

Query: 192 LIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPN 371
           LI MY+ C DV  A+ LFD +    +V WNA+IT Y++ G   E +++F  M    V  +
Sbjct: 160 LIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFD 219

Query: 372 EITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFV 551
           EIT+V+V++AC  +G  KLG+ V  Y+   GL  N  L T+L+DMY+KCG +  A  +F 
Sbjct: 220 EITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFD 279

Query: 552 KMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEE 731
            M ++DV   +AMI G       R++LA+ ++M+    +PND+T + VLSAC     +E 
Sbjct: 280 GMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALET 339

Query: 732 GRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALL 902
           G+   S  + +  LS  +     +VD   + G +D+AVE  ++M V  +S  W AL+
Sbjct: 340 GKWVHS-YIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK-NSWTWTALI 394


>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Vitis vinifera]
          Length = 738

 Score =  374 bits (959), Expect = e-101
 Identities = 194/410 (47%), Positives = 267/410 (65%), Gaps = 1/410 (0%)
 Frame = +3

Query: 27   FLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILNTALIDMY 206
            F Q +  A+V  PN +TMV            ++G WV  +I+ + +  N  L  ALIDMY
Sbjct: 251  FFQEMKRANVA-PNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMY 309

Query: 207  SKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMV 386
            SKCGD++KAR LF+ I  K+++SWN MI GY      +EA+ LF  MQ  +V PN++T V
Sbjct: 310  SKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFV 369

Query: 387  NVLSACAGLGALKLGREVHLYLGRNGLDL-NVILATSLVDMYSKCGSIDDACLVFVKMAN 563
            ++L ACA LGAL LG+ +H Y+ +  L L N  L TSL+DMY+KCG+I+ A  VF  M  
Sbjct: 370  SILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKP 429

Query: 564  KDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQ 743
            K +   NAMI GLA HG+   +L +  QM   G +P+DITF+GVLSAC+H+ LVE GR  
Sbjct: 430  KSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQC 489

Query: 744  FSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLSACRIHR 923
            FS+MV  + +SPK++HY CM+DLLGRAG  DEA  L++NM + PD  IWG+LL ACR+H 
Sbjct: 490  FSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHG 549

Query: 924  NVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERGVKKPYGCSWI 1103
            NV+L +     +   +  N G  +LLSNIYA+ GRW DVAR+R  + ++G+KK  GCS I
Sbjct: 550  NVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSI 609

Query: 1104 EIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPNFDFVLKNID 1253
            E+DS+VH FL  D  H QSQ+IY++   +   ++  G+VP+   VL ++D
Sbjct: 610  EVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMD 659



 Score =  174 bits (440), Expect = 1e-40
 Identities = 94/257 (36%), Positives = 154/257 (59%), Gaps = 1/257 (0%)
 Frame = +3

Query: 171 NAILNTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQ 350
           +A+  TALI  Y+  G ++ ARRLF+EI  ++ VSWNAMI GY Q G  EEA+  F  M+
Sbjct: 197 DAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMK 256

Query: 351 AKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSID 530
             +V PNE TMV VLSACA  G+L+LG  V  ++  +GL  N+ L  +L+DMYSKCG +D
Sbjct: 257 RANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLD 316

Query: 531 DACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACN 710
            A  +F  +  KD+   N MI G +H  + +++LA+  +M+++  +PND+TF+ +L AC 
Sbjct: 317 KARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACA 376

Query: 711 HSRLVEEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSI-I 887
           +   ++ G+   + +  K+        +  ++D+  + G ++ A ++   M   P S+  
Sbjct: 377 YLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGM--KPKSLGS 434

Query: 888 WGALLSACRIHRNVDLA 938
           W A++S   +H + ++A
Sbjct: 435 WNAMISGLAMHGHANMA 451



 Score =  103 bits (256), Expect = 2e-19
 Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 35/267 (13%)
 Frame = +3

Query: 207 SKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMV 386
           S  G++  A  LF+ I   N   WN MI G         AI  +  M    V PN  T  
Sbjct: 77  SPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFP 136

Query: 387 NVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGS-------------- 524
            +L +CA +GA + G+++H ++ + GL+ +  + TSL++MY++ G               
Sbjct: 137 FLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLR 196

Query: 525 -----------------IDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQME 653
                            +DDA  +F ++  +D    NAMI G A  G   ++LA   +M+
Sbjct: 197 DAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMK 256

Query: 654 KNGTDPNDITFIGVLSACNHSRLVEEGRVQFSNMVMKW----GLSPKVEHYACMVDLLGR 821
           +    PN+ T + VLSAC      + G ++  N V  W    GL   +     ++D+  +
Sbjct: 257 RANVAPNESTMVTVLSAC-----AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSK 311

Query: 822 AGYLDEAVELVQNMVVSPDSIIWGALL 902
            G LD+A +L +  +   D I W  ++
Sbjct: 312 CGDLDKARDLFEG-ICEKDIISWNVMI 337


>ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400-like
            [Cucumis sativus]
          Length = 619

 Score =  369 bits (946), Expect = 2e-99
 Identities = 185/407 (45%), Positives = 264/407 (64%), Gaps = 2/407 (0%)
 Frame = +3

Query: 12   EMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILNTA 191
            E +GLF +M+ +    +PN  ++V            K+G WV  F+  N + LN  + +A
Sbjct: 211  EAVGLFREMMEAG--FQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSA 268

Query: 192  LIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPN 371
            LI MY KCGD+  ARR+FD +  K+ V+WNAMITGY Q GM EEAI+LF  M+  S  P+
Sbjct: 269  LIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPD 328

Query: 372  EITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFV 551
            +IT++ +LSACA +GAL LG++V +Y    G   +V + T+LVDMY+KCGS+D+A  VF 
Sbjct: 329  QITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFY 388

Query: 552  KMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNG--TDPNDITFIGVLSACNHSRLV 725
             M NK+    NAMI  LA HG  +++LA+   M   G    PNDITF+GVLSAC H+ LV
Sbjct: 389  GMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLV 448

Query: 726  EEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLS 905
            +EGR  F  M   +GL PK+EHY+CMVDL  RAG+L+EA + V  M   PD +I GALL 
Sbjct: 449  DEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLG 508

Query: 906  ACRIHRNVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERGVKKP 1085
            AC+  +N+D+++++  L+L  +  N G  ++ S +YA++ RW D AR+R L++++GV K 
Sbjct: 509  ACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKT 568

Query: 1086 YGCSWIEIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPN 1226
             GCSWI+I+S +H F A D  H +  EI+++   L   ++ EGY+PN
Sbjct: 569  PGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREGYIPN 615



 Score =  164 bits (415), Expect = 8e-38
 Identities = 91/244 (37%), Positives = 137/244 (56%)
 Frame = +3

Query: 189 ALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRP 368
           +LI MY++CG +  AR++FDEIS K+LVSWN+MI+GY +     EA+ LF  M     +P
Sbjct: 167 SLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQP 226

Query: 369 NEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVF 548
           NE+++V+VL AC  LG LKLG  V  ++  N + LN  + ++L+ MY KCG +  A  +F
Sbjct: 227 NEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIF 286

Query: 549 VKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVE 728
             M  KD    NAMI G A +G   +++ +   M  + T P+ IT IG+LSAC     ++
Sbjct: 287 DSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALD 346

Query: 729 EGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLSA 908
            G+ Q      + G    V     +VD+  + G LD A  +   M  + + + W A++SA
Sbjct: 347 LGK-QVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGM-PNKNEVSWNAMISA 404

Query: 909 CRIH 920
              H
Sbjct: 405 LAFH 408



 Score = 92.0 bits (227), Expect = 5e-16
 Identities = 76/291 (26%), Positives = 141/291 (48%), Gaps = 6/291 (2%)
 Frame = +3

Query: 219  DVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEE-AIQLFYLMQAKSVRPNEITMVNVL 395
            D   A   F  I      S+N MI G          A++ +  M+   ++PN +T   + 
Sbjct: 75   DFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLF 134

Query: 396  SACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVA 575
             AC+ L A++ GR  H  + R GLD +  ++ SL+ MY++CG + DA  VF +++ KD+ 
Sbjct: 135  IACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLV 194

Query: 576  FCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFSNM 755
              N+MI G +   +  +++ +  +M + G  PN+++ + VL AC      E G ++    
Sbjct: 195  SWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACG-----ELGDLKLGTW 249

Query: 756  VMKWGLSPKVE-HY---ACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLSACRIHR 923
            V ++ +  K+  +Y   + ++ + G+ G L  A  +  +M    D + W A+++    + 
Sbjct: 250  VEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSM-KKKDKVTWNAMITGYAQNG 308

Query: 924  NVDLADKI-GDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERG 1073
              + A K+  D+ +SS  P+    I + +  AS+G      +V     ERG
Sbjct: 309  MSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERG 359


>ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
            [Vitis vinifera]
          Length = 698

 Score =  368 bits (945), Expect = 3e-99
 Identities = 176/408 (43%), Positives = 274/408 (67%)
 Frame = +3

Query: 3    NLVEMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAIL 182
            N  E++ LF +ML     +  +  T+V            ++G W++ +++   +  N  L
Sbjct: 205  NWEEVVKLFHEMLELD--IRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTL 262

Query: 183  NTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSV 362
             T+L+DMY+KCG V+ ARRLFD++  +++V+W+AMI+GY Q     EA+ LF+ MQ  ++
Sbjct: 263  ITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANI 322

Query: 363  RPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACL 542
             PNEITMV++LS+CA LGAL+ G+ VH ++ +  + L V L T+L+D Y+KCGS++ +  
Sbjct: 323  DPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIE 382

Query: 543  VFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRL 722
            VF KM  K+V     +I GLA +G G+ +L     M +   +PND+TFIGVLSAC+H+ L
Sbjct: 383  VFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGL 442

Query: 723  VEEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALL 902
            V+EGR  F +M   +G+ P++EHY CMVD+LGRAG ++EA + ++NM + P+++IW  LL
Sbjct: 443  VDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLL 502

Query: 903  SACRIHRNVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERGVKK 1082
            ++C++H+NV++ ++    ++  +  + G  ILLSNIYASVGRW+D  +VR  ++E+G+KK
Sbjct: 503  ASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKK 562

Query: 1083 PYGCSWIEIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPN 1226
              GCS IE+D ++H F AED  H QS+EIY   +++  Q+K  GYVPN
Sbjct: 563  TPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPN 610



 Score =  162 bits (410), Expect = 3e-37
 Identities = 89/245 (36%), Positives = 144/245 (58%), Gaps = 1/245 (0%)
 Frame = +3

Query: 171 NAILNTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQ 350
           +  +   LI MY+ CG+VE ARR+FDE+S +N+ +WN+M  GY + G  EE ++LF+ M 
Sbjct: 158 HGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEML 217

Query: 351 AKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSID 530
              +R +E+T+V+VL+AC  L  L+LG  ++ Y+   GL  N  L TSLVDMY+KCG +D
Sbjct: 218 ELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVD 277

Query: 531 DACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACN 710
            A  +F +M  +DV   +AMI G +     R++L +  +M+K   DPN+IT + +LS+C 
Sbjct: 278 TARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCA 337

Query: 711 HSRLVEEGR-VQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSII 887
               +E G+ V F   + K  +   V     ++D   + G ++ ++E+   M V  + + 
Sbjct: 338 VLGALETGKWVHF--FIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVK-NVLS 394

Query: 888 WGALL 902
           W  L+
Sbjct: 395 WTVLI 399



 Score =  101 bits (251), Expect = 8e-19
 Identities = 73/278 (26%), Positives = 131/278 (47%), Gaps = 8/278 (2%)
 Frame = +3

Query: 222  VEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVNVLSA 401
            ++ A  +F +I   +  ++N MI G+  +    EAI LF  M   SV+P+E T   +L  
Sbjct: 74   MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKV 133

Query: 402  CAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVAFC 581
            C+ L AL  G ++H  + + G   +  +  +L+ MY+ CG ++ A  VF +M+ ++V   
Sbjct: 134  CSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTW 193

Query: 582  NAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFSNMVM 761
            N+M  G    GN  + + +  +M +     +++T + VL+AC     +E G    +  V 
Sbjct: 194  NSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGE-WINRYVE 252

Query: 762  KWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLSA-CRIHRNVDLA 938
            + GL         +VD+  + G +D A  L   M    D + W A++S   +  R  +  
Sbjct: 253  EKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQM-DRRDVVAWSAMISGYSQASRCREAL 311

Query: 939  DKIGDLILSSQDPN-------LGFCILLSNIYASVGRW 1031
            D   ++  ++ DPN       L  C +L  +    G+W
Sbjct: 312  DLFHEMQKANIDPNEITMVSILSSCAVLGAL--ETGKW 347


>ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400-like
            [Cucumis sativus]
          Length = 619

 Score =  366 bits (940), Expect = 1e-98
 Identities = 184/407 (45%), Positives = 263/407 (64%), Gaps = 2/407 (0%)
 Frame = +3

Query: 12   EMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILNTA 191
            E +GLF +M+ +    +PN  ++V            K+G WV  F+  N + LN  + +A
Sbjct: 211  EAVGLFREMMEAG--FQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSA 268

Query: 192  LIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPN 371
            LI MY KCGD+  ARR+FD +  K+ V+WNAMITGY Q GM EEAI+LF  M+  S  P+
Sbjct: 269  LIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPD 328

Query: 372  EITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFV 551
            +IT++ +LSACA +GAL LG++V +Y    G   +V + T+LVDMY+KCGS+D+A  VF 
Sbjct: 329  QITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFY 388

Query: 552  KMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNG--TDPNDITFIGVLSACNHSRLV 725
             M  K+    NAMI  LA HG  +++LA+   M   G    PNDITF+GVLSAC H+ LV
Sbjct: 389  GMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLV 448

Query: 726  EEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLS 905
            +EGR  F  M   +GL PK+EHY+CMVDL  RAG+L+EA + V  M   PD +I GALL 
Sbjct: 449  DEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLG 508

Query: 906  ACRIHRNVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERGVKKP 1085
            AC+  +N+D+++++  L+L  +  N G  ++ S +YA++ RW D AR+R L++++GV K 
Sbjct: 509  ACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKT 568

Query: 1086 YGCSWIEIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPN 1226
             GCSWI+I+S +H F A D  H +  EI+++   L   ++ EGY+PN
Sbjct: 569  PGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREGYIPN 615



 Score =  164 bits (414), Expect = 1e-37
 Identities = 91/244 (37%), Positives = 136/244 (55%)
 Frame = +3

Query: 189 ALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRP 368
           +LI MY++CG +  AR++FDEIS K+LVSWN+MI+GY +     EA+ LF  M     +P
Sbjct: 167 SLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQP 226

Query: 369 NEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVF 548
           NE+++V+VL AC  LG LKLG  V  ++  N + LN  + ++L+ MY KCG +  A  +F
Sbjct: 227 NEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIF 286

Query: 549 VKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVE 728
             M  KD    NAMI G A +G   +++ +   M  + T P+ IT IG+LSAC     ++
Sbjct: 287 DSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALD 346

Query: 729 EGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLSA 908
            G+ Q      + G    V     +VD+  + G LD A  +   M    + + W A++SA
Sbjct: 347 LGK-QVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGM-PKKNEVSWNAMISA 404

Query: 909 CRIH 920
              H
Sbjct: 405 LAFH 408



 Score = 92.0 bits (227), Expect = 5e-16
 Identities = 76/291 (26%), Positives = 141/291 (48%), Gaps = 6/291 (2%)
 Frame = +3

Query: 219  DVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEE-AIQLFYLMQAKSVRPNEITMVNVL 395
            D   A   F  I      S+N MI G          A++ +  M+   ++PN +T   + 
Sbjct: 75   DFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLF 134

Query: 396  SACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVA 575
             AC+ L A++ GR  H  + R GLD +  ++ SL+ MY++CG + DA  VF +++ KD+ 
Sbjct: 135  IACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLV 194

Query: 576  FCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFSNM 755
              N+MI G +   +  +++ +  +M + G  PN+++ + VL AC      E G ++    
Sbjct: 195  SWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACG-----ELGDLKLGTW 249

Query: 756  VMKWGLSPKVE-HY---ACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLSACRIHR 923
            V ++ +  K+  +Y   + ++ + G+ G L  A  +  +M    D + W A+++    + 
Sbjct: 250  VEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSM-KKKDKVTWNAMITGYAQNG 308

Query: 924  NVDLADKI-GDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERG 1073
              + A K+  D+ +SS  P+    I + +  AS+G      +V     ERG
Sbjct: 309  MSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERG 359


>ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao] gi|508783730|gb|EOY30986.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein,
            putative [Theobroma cacao]
          Length = 847

 Score =  365 bits (938), Expect = 2e-98
 Identities = 183/410 (44%), Positives = 268/410 (65%), Gaps = 1/410 (0%)
 Frame = +3

Query: 27   FLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILNTALIDMY 206
            F + ++ A+VV PN +T+V            ++G WV  +I+ + +  N  L  ALIDMY
Sbjct: 307  FFEEMIGANVV-PNESTLVSVLSACAQSGSLELGTWVRSWINEHGLGSNIHLANALIDMY 365

Query: 207  SKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMV 386
            SKCGD++ A  LF+ +  ++++SWN MI GY      +EA+ LF  M   ++ P+++T +
Sbjct: 366  SKCGDLDTAFDLFEGLQQRDVISWNVMIGGYTHMSYYKEALGLFRRMLRSNIEPSDVTFL 425

Query: 387  NVLSACAGLGALKLGREVHLYLGRNGLD-LNVILATSLVDMYSKCGSIDDACLVFVKMAN 563
            +VL ACA LGAL LG+ +H Y+ +N  +  N+ L TSL+DMY+KCGSI+ A  VF  M  
Sbjct: 426  SVLPACANLGALDLGKWIHAYIDKNFQNSTNISLWTSLIDMYAKCGSIEAAQQVFNGMEQ 485

Query: 564  KDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQ 743
            K++A  NAMI GLA HG    +L + +QM   G  P+DITF+GVLSAC H+ L++ GR  
Sbjct: 486  KNLASWNAMISGLAMHGLADKALELFSQMMGGGLKPDDITFVGVLSACTHAGLLDLGRQY 545

Query: 744  FSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLSACRIHR 923
            FS+MV ++ +SP ++HY CMV+LLGRAG  DEA  L+QNM + PD  IWG+LL ACR+H+
Sbjct: 546  FSSMVQEYAISPDLQHYGCMVNLLGRAGLFDEAEALIQNMEMKPDGAIWGSLLGACRVHK 605

Query: 924  NVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERGVKKPYGCSWI 1103
             V+L + +   +L  +  N G  +LLSNIYA  GRW DVAR+R L+  +G+KK  GCS I
Sbjct: 606  RVELGESVAQRLLELEPDNPGAYVLLSNIYAGAGRWDDVARIRTLLNNKGMKKVPGCSSI 665

Query: 1104 EIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPNFDFVLKNID 1253
            E+DS+VH FL  D  H + +EIY++   +   ++  G+VP+   V++++D
Sbjct: 666  EVDSVVHEFLVSDKVHPRCKEIYDMLNEVDTLLEKAGFVPDTSEVIRDMD 715



 Score =  170 bits (431), Expect = 1e-39
 Identities = 97/257 (37%), Positives = 150/257 (58%)
 Frame = +3

Query: 186  TALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVR 365
            TALI  Y   G +E AR+LFDEI  +++VSWNAMI GY Q G  EEA+  F  M   +V 
Sbjct: 258  TALITGYVSIGYMENARKLFDEIPIRDVVSWNAMIAGYAQTGQHEEALAFFEEMIGANVV 317

Query: 366  PNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLV 545
            PNE T+V+VLSACA  G+L+LG  V  ++  +GL  N+ LA +L+DMYSKCG +D A  +
Sbjct: 318  PNESTLVSVLSACAQSGSLELGTWVRSWINEHGLGSNIHLANALIDMYSKCGDLDTAFDL 377

Query: 546  FVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLV 725
            F  +  +DV   N MI G  H    +++L +  +M ++  +P+D+TF+ VL AC +   +
Sbjct: 378  FEGLQQRDVISWNVMIGGYTHMSYYKEALGLFRRMLRSNIEPSDVTFLSVLPACANLGAL 437

Query: 726  EEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLS 905
            + G+   + +   +  S  +  +  ++D+  + G + EA + V N +   +   W A++S
Sbjct: 438  DLGKWIHAYIDKNFQNSTNISLWTSLIDMYAKCGSI-EAAQQVFNGMEQKNLASWNAMIS 496

Query: 906  ACRIHRNVDLADKIGDL 956
               +H    LADK  +L
Sbjct: 497  GLAMH---GLADKALEL 510



 Score = 97.1 bits (240), Expect = 2e-17
 Identities = 73/267 (27%), Positives = 115/267 (43%), Gaps = 35/267 (13%)
 Frame = +3

Query: 207 SKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMV 386
           S  GD+  A  LF+ I   N V WN MI G+         ++ +  M    + PN  T  
Sbjct: 133 SPFGDLPYALLLFESIDEPNQVIWNTMIRGFSLSSSPGLTLEFYVKMIWSGIVPNSYTFP 192

Query: 387 NVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVK---- 554
            VL +CA   + + G+++H  + + GL+ +  + TSL++MY++ G   +A LVF K    
Sbjct: 193 FVLKSCAKTASTQEGKQIHGQVLKLGLESDAFVHTSLINMYAQNGEFGNARLVFDKSHLR 252

Query: 555 -----------------MAN----------KDVAFCNAMILGLAHHGNGRDSLAILTQME 653
                            M N          +DV   NAMI G A  G   ++LA   +M 
Sbjct: 253 DTVSYTALITGYVSIGYMENARKLFDEIPIRDVVSWNAMIAGYAQTGQHEEALAFFEEMI 312

Query: 654 KNGTDPNDITFIGVLSACNHSRLVEEGRVQFSNMVMKW----GLSPKVEHYACMVDLLGR 821
                PN+ T + VLSAC      + G ++    V  W    GL   +     ++D+  +
Sbjct: 313 GANVVPNESTLVSVLSAC-----AQSGSLELGTWVRSWINEHGLGSNIHLANALIDMYSK 367

Query: 822 AGYLDEAVELVQNMVVSPDSIIWGALL 902
            G LD A +L + +    D I W  ++
Sbjct: 368 CGDLDTAFDLFEGL-QQRDVISWNVMI 393


>gb|EMT27117.1| hypothetical protein F775_08942 [Aegilops tauschii]
          Length = 588

 Score =  365 bits (936), Expect = 3e-98
 Identities = 184/407 (45%), Positives = 260/407 (63%)
 Frame = +3

Query: 6    LVEMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILN 185
            +VEM    L++    D V     T+V            K+G  +  + +   +  N  L 
Sbjct: 99   VVEMFKGILEVQAPFDEV-----TLVSVATACGKIGDSKLGERIGDYAEEKGMVRNRNLA 153

Query: 186  TALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVR 365
            TAL+DMY+KCG ++KARRLFD +  +++V+W+AMI+GY Q     EA+ +F  MQA  V 
Sbjct: 154  TALVDMYAKCGQLDKARRLFDRMHSRDVVAWSAMISGYTQADRCREALAIFNKMQATEVN 213

Query: 366  PNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLV 545
            PN++TMV+VLSACA LGAL+ G+  H Y+ R  L L V+L T+LVD Y+KCG I+DA   
Sbjct: 214  PNDVTMVSVLSACAVLGALETGKWAHSYIRRKALPLTVVLGTALVDFYAKCGCIEDAVKA 273

Query: 546  FVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLV 725
            F  M  ++     A+I G+A +G GR++L + + M +   +P D+TFIGVL AC+HS LV
Sbjct: 274  FESMPMRNSWTWTALIKGMASNGRGREALELFSSMREANIEPTDVTFIGVLLACSHSCLV 333

Query: 726  EEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLS 905
            EEGR  F +M   +G+ P +EHY CMVDLLGRAG +DEA   ++NM + P++++W ALLS
Sbjct: 334  EEGRRHFDSMTQDYGIHPSIEHYGCMVDLLGRAGLIDEAHRFIRNMPIEPNAVVWRALLS 393

Query: 906  ACRIHRNVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERGVKKP 1085
            AC +H+NV++ ++    I      + G  ILLSN YASVG+WKD A +R+ + ERG+KK 
Sbjct: 394  ACTVHKNVEIGEEALKQITPLDPNHSGNYILLSNTYASVGQWKDAAMIRKEMNERGIKKI 453

Query: 1086 YGCSWIEIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPN 1226
             GCS IE+D  +  F AED+ H QS+EIYE    +   +K+ GYVPN
Sbjct: 454  PGCSLIELDGTIFEFFAEDSDHPQSREIYEKVDEMIENIKMAGYVPN 500



 Score =  150 bits (378), Expect = 1e-33
 Identities = 87/242 (35%), Positives = 140/242 (57%)
 Frame = +3

Query: 177 ILNTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAK 356
           +LN+ LI MY+ CGD+  A+ LF+ +  K +V+WNAMI GY + G  +E +++F  +   
Sbjct: 51  VLNS-LIHMYASCGDIVAAKVLFNAVEEKGVVTWNAMIAGYFKNGDWKEVVEMFKGILEV 109

Query: 357 SVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDA 536
               +E+T+V+V +AC  +G  KLG  +  Y    G+  N  LAT+LVDMY+KCG +D A
Sbjct: 110 QAPFDEVTLVSVATACGKIGDSKLGERIGDYAEEKGMVRNRNLATALVDMYAKCGQLDKA 169

Query: 537 CLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHS 716
             +F +M ++DV   +AMI G       R++LAI  +M+    +PND+T + VLSAC   
Sbjct: 170 RRLFDRMHSRDVVAWSAMISGYTQADRCREALAIFNKMQATEVNPNDVTMVSVLSACAVL 229

Query: 717 RLVEEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGA 896
             +E G+   S  + +  L   V     +VD   + G +++AV+  ++M +  +S  W A
Sbjct: 230 GALETGKWAHS-YIRRKALPLTVVLGTALVDFYAKCGCIEDAVKAFESMPMR-NSWTWTA 287

Query: 897 LL 902
           L+
Sbjct: 288 LI 289



 Score = 74.7 bits (182), Expect = 8e-11
 Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
 Frame = +3

Query: 351 AKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSID 530
           A +V P++ T+ N + +CA + AL  GR V  Y  + G   +  +  SL+ MY+ CG I 
Sbjct: 7   AANVCPDQHTIANTVKSCARIYALATGRSVQAYAVKLGFMADQFVLNSLIHMYASCGDIV 66

Query: 531 DACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSAC- 707
            A ++F  +  K V   NAMI G   +G+ ++ + +   + +     +++T + V +AC 
Sbjct: 67  AAKVLFNAVEEKGVVTWNAMIAGYFKNGDWKEVVEMFKGILEVQAPFDEVTLVSVATACG 126

Query: 708 --NHSRLVEEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDS 881
               S+L E    +  +   + G+         +VD+  + G LD+A  L   M  S D 
Sbjct: 127 KIGDSKLGE----RIGDYAEEKGMVRNRNLATALVDMYAKCGQLDKARRLFDRM-HSRDV 181

Query: 882 IIWGALLS 905
           + W A++S
Sbjct: 182 VAWSAMIS 189


>ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
            [Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed
            protein product [Vitis vinifera]
          Length = 618

 Score =  363 bits (932), Expect = 9e-98
 Identities = 188/411 (45%), Positives = 267/411 (64%), Gaps = 2/411 (0%)
 Frame = +3

Query: 12   EMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILNTA 191
            + +GLF +M  +    EP+  T+V             +G W+  F+  N + LN+ + +A
Sbjct: 210  DAVGLFGEMRDAG--FEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSA 267

Query: 192  LIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPN 371
            LI MY KCGD+  ARR+FD +  K++V+WNAMITGY Q G+ +EAI LF  M+   V P+
Sbjct: 268  LIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPD 327

Query: 372  EITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFV 551
            +IT+V VLSACA +GAL  G+ +  Y    GL  ++ ++T+L+DMY+KCGS+DDA  VF 
Sbjct: 328  KITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFE 387

Query: 552  KMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNG--TDPNDITFIGVLSACNHSRLV 725
             M  K+    NAMI  LA HG  ++SL++  +M K G    PNDI+FIGVLSAC H+ LV
Sbjct: 388  DMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLV 447

Query: 726  EEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLS 905
            +EGR  F  M   +GL PK+EH++CMVDLL RAG++ EA + ++ M   PD ++ GALL 
Sbjct: 448  DEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLG 507

Query: 906  ACRIHRNVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERGVKKP 1085
            AC+  RNVD+++++  ++L  +  N G  I+ S I+A++ RW D AR+R L+R+RGV K 
Sbjct: 508  ACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKT 567

Query: 1086 YGCSWIEIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPNFDFV 1238
             GCSWIEI++ VH F A D  H  SQ++ +V   L  +MKVEGY P  DF+
Sbjct: 568  PGCSWIEIENQVHEFHAGDVLHFISQDMCQVINLLNEEMKVEGYGPKVDFL 618



 Score =  174 bits (441), Expect = 7e-41
 Identities = 91/244 (37%), Positives = 147/244 (60%)
 Frame = +3

Query: 189 ALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRP 368
           +LI MYS+CG++  ARR+FDEIS K+LVSWN+MI+GY + G   +A+ LF  M+     P
Sbjct: 166 SLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEP 225

Query: 369 NEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVF 548
           +E+T+V++L AC  LG L LG  +  ++  N +DLN  + ++L+ MY KCG +  A  VF
Sbjct: 226 DEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVF 285

Query: 549 VKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVE 728
            +M  KDV   NAMI G A +G   +++ + + M ++G +P+ IT +GVLSAC     ++
Sbjct: 286 DRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALD 345

Query: 729 EGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLSA 908
            G+        + GL   +     ++D+  + G LD+A+ + ++M    + + W A++SA
Sbjct: 346 FGK-WLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDM-PQKNEVSWNAMISA 403

Query: 909 CRIH 920
              H
Sbjct: 404 LAFH 407



 Score = 92.4 bits (228), Expect = 4e-16
 Identities = 69/252 (27%), Positives = 117/252 (46%), Gaps = 1/252 (0%)
 Frame = +3

Query: 153 VNAIPLNAILNTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGM-LEEAI 329
           +NAI     L    ID+     D   A  LF +I   N  ++N MI G           I
Sbjct: 56  INAIHKPNFLLHRFIDLK----DFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTI 111

Query: 330 QLFYLMQAKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMY 509
           + +Y M+   +RPN  T   V  ACA L  L  G+  H  + ++GL  +  +  SL+ MY
Sbjct: 112 EFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMY 171

Query: 510 SKCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFI 689
           S+CG +  A  VF +++ KD+   N+MI G +  G   D++ +  +M   G +P+++T +
Sbjct: 172 SRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLV 231

Query: 690 GVLSACNHSRLVEEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVV 869
            +L AC     +  G       V++  +       + ++ + G+ G L  A  +   M V
Sbjct: 232 SILGACGDLGDLGLGS-WIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRM-V 289

Query: 870 SPDSIIWGALLS 905
             D + W A+++
Sbjct: 290 KKDVVTWNAMIT 301


>ref|XP_004304765.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Fragaria vesca subsp. vesca]
          Length = 684

 Score =  363 bits (931), Expect = 1e-97
 Identities = 179/414 (43%), Positives = 271/414 (65%)
 Frame = +3

Query: 12   EMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILNTA 191
            E + LF +ML       PN  T++            ++G+W+  ++  N   ++  L TA
Sbjct: 194  EGVKLFKRMLEERKF--PNEITVLSLIIESGNVGALELGKWLHAYVLRNGFVMSLALATA 251

Query: 192  LIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPN 371
            L+DMY KCG+ E AR +FD I  K+++ W+AMI+ Y +     +A +LF  M+   VRPN
Sbjct: 252  LVDMYGKCGEAEYARAVFDSIEEKDVMIWSAMISAYSRANQTNQASELFARMKDSGVRPN 311

Query: 372  EITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFV 551
            ++TMV+++S C  +GAL LG+ VH Y+ +  +D++VIL T+LVDMY+KCG ID A  +F 
Sbjct: 312  QVTMVSLISLCGEVGALDLGKWVHSYINQQRIDVDVILRTALVDMYAKCGEIDVALRLFS 371

Query: 552  KMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEE 731
            +  N+D    N MI GLA HG G+ +L +  +M++ G  PNDITFIG+L AC+H+ LV +
Sbjct: 372  EAINRDSQMWNVMITGLAMHGCGKQALELFEEMQRQGVKPNDITFIGLLHACSHAGLVAD 431

Query: 732  GRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLSAC 911
            G+  F  MV  + L+PKVEHY CMVDLLGRAG LDEA +L+++M + P++I+WG+LL+AC
Sbjct: 432  GKKIFEKMVHDFSLAPKVEHYGCMVDLLGRAGKLDEAHKLIKSMPLEPNTIVWGSLLAAC 491

Query: 912  RIHRNVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERGVKKPYG 1091
            + H++ +LA+     +L  +  N G+ +L+SNIYA+  +W DVA VR+ ++++G KK  G
Sbjct: 492  KTHKSPNLAEVAARQLLKLEPQNCGYNVLMSNIYAASNKWVDVAGVRKAMKDQGTKKEPG 551

Query: 1092 CSWIEIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPNFDFVLKNID 1253
             S IE++  VH F+  D TH Q+++IYE+   +  ++K  GY PN   VL+NID
Sbjct: 552  LSSIEVNGAVHDFMMGDKTHPQTRKIYEMLAEMNKKLKEAGYTPNTSVVLQNID 605



 Score =  155 bits (393), Expect = 3e-35
 Identities = 88/290 (30%), Positives = 156/290 (53%), Gaps = 2/290 (0%)
 Frame = +3

Query: 57  VEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAIL--NTALIDMYSKCGDVEK 230
           V+P+   M+            KM + +  ++  N+     ++   TAL+DMY KCG++  
Sbjct: 104 VKPSEVAMISMIGLFADIADVKMAKAMHCYVVRNSANEKLVVPVTTALVDMYVKCGNLGY 163

Query: 231 ARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVNVLSACAG 410
           ARRLFD ++ K++VSW  MI G ++   +EE ++LF  M  +   PNEIT+++++     
Sbjct: 164 ARRLFDGLAEKSVVSWTTMIAGCIRCNEVEEGVKLFKRMLEERKFPNEITVLSLIIESGN 223

Query: 411 LGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVAFCNAM 590
           +GAL+LG+ +H Y+ RNG  +++ LAT+LVDMY KCG  + A  VF  +  KDV   +AM
Sbjct: 224 VGALELGKWLHAYVLRNGFVMSLALATALVDMYGKCGEAEYARAVFDSIEEKDVMIWSAM 283

Query: 591 ILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFSNMVMKWG 770
           I   +       +  +  +M+ +G  PN +T + ++S C     ++ G+   S  + +  
Sbjct: 284 ISAYSRANQTNQASELFARMKDSGVRPNQVTMVSLISLCGEVGALDLGKWVHS-YINQQR 342

Query: 771 LSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLSACRIH 920
           +   V     +VD+  + G +D A+ L     ++ DS +W  +++   +H
Sbjct: 343 IDVDVILRTALVDMYAKCGEIDVALRLFSE-AINRDSQMWNVMITGLAMH 391



 Score =  125 bits (313), Expect = 5e-26
 Identities = 84/304 (27%), Positives = 153/304 (50%), Gaps = 3/304 (0%)
 Frame = +3

Query: 123  MGRWVSVFIDVNAIPLNAILNTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYV 302
            +GR +  F     +  +A +  ALI MY +CG +E AR +FD +  +++VSW+ MI GYV
Sbjct: 25   LGREIHGFALKGGLDCDAFVCNALIKMYGECGRLELARLVFDVMCERDVVSWSTMINGYV 84

Query: 303  QRGMLEEAIQLFYLMQAKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLD--LN 476
            +     EA+++   M    V+P+E+ M++++   A +  +K+ + +H Y+ RN  +  L 
Sbjct: 85   RNRGFGEALEVIREMHFLQVKPSEVAMISMIGLFADIADVKMAKAMHCYVVRNSANEKLV 144

Query: 477  VILATSLVDMYSKCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEK 656
            V + T+LVDMY KCG++  A  +F  +A K V     MI G        + + +  +M +
Sbjct: 145  VPVTTALVDMYVKCGNLGYARRLFDGLAEKSVVSWTTMIAGCIRCNEVEEGVKLFKRMLE 204

Query: 657  NGTDPNDITFIGVLSACNHSRLVEEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLD 836
                PN+IT + ++    +   +E G+      V++ G    +     +VD+ G+ G  +
Sbjct: 205  ERKFPNEITVLSLIIESGNVGALELGK-WLHAYVLRNGFVMSLALATALVDMYGKCGEAE 263

Query: 837  EAVELVQNMVVSPDSIIWGALLSA-CRIHRNVDLADKIGDLILSSQDPNLGFCILLSNIY 1013
             A   V + +   D +IW A++SA  R ++    ++    +  S   PN    + L ++ 
Sbjct: 264  YA-RAVFDSIEEKDVMIWSAMISAYSRANQTNQASELFARMKDSGVRPNQVTMVSLISLC 322

Query: 1014 ASVG 1025
              VG
Sbjct: 323  GEVG 326



 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 7/228 (3%)
 Frame = +3

Query: 369  NEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVF 548
            +  T+ +VL AC       LGRE+H +  + GLD +  +  +L+ MY +CG ++ A LVF
Sbjct: 6    DHFTIPSVLKACGQSSVEMLGREIHGFALKGGLDCDAFVCNALIKMYGECGRLELARLVF 65

Query: 549  VKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVE 728
              M  +DV   + MI G   +    ++L ++ +M      P+++  I ++        V+
Sbjct: 66   DVMCERDVVSWSTMINGYVRNRGFGEALEVIREMHFLQVKPSEVAMISMIGLFADIADVK 125

Query: 729  EGRVQFSNMVMKWGLSPKVEHY-ACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLS 905
              +     +V        V      +VD+  + G L  A  L   +      + W  +++
Sbjct: 126  MAKAMHCYVVRNSANEKLVVPVTTALVDMYVKCGNLGYARRLFDGL-AEKSVVSWTTMIA 184

Query: 906  ACRIHRNVDLADKIGDLILSSQD-PN----LGFCILLSNIYA-SVGRW 1031
             C     V+   K+   +L  +  PN    L   I   N+ A  +G+W
Sbjct: 185  GCIRCNEVEEGVKLFKRMLEERKFPNEITVLSLIIESGNVGALELGKW 232


>ref|XP_007014360.1| Pentatricopeptide repeat superfamily protein isoform 4 [Theobroma
            cacao] gi|590581496|ref|XP_007014363.1| Pentatricopeptide
            repeat superfamily protein isoform 4 [Theobroma cacao]
            gi|508784723|gb|EOY31979.1| Pentatricopeptide repeat
            superfamily protein isoform 4 [Theobroma cacao]
            gi|508784726|gb|EOY31982.1| Pentatricopeptide repeat
            superfamily protein isoform 4 [Theobroma cacao]
          Length = 619

 Score =  359 bits (922), Expect = 1e-96
 Identities = 189/409 (46%), Positives = 263/409 (64%), Gaps = 2/409 (0%)
 Frame = +3

Query: 12   EMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILNTA 191
            E +GLF +M     V  P+  T+V             +GRWV  F   + I LN+ + +A
Sbjct: 211  EAVGLFGKMREEGFV--PDEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASA 268

Query: 192  LIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPN 371
            LI MY KCGD   AR +FD +  K++V+WNAMITGY Q GM +EAI+LF+ M+   V P+
Sbjct: 269  LIGMYGKCGDFVSARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPD 328

Query: 372  EITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFV 551
            +IT+V VLSACA +GAL LG+ +  Y  + GL  N+ ++T+LVDMY+KCGS+D+A  VF 
Sbjct: 329  KITLVGVLSACASIGALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKCGSLDNAQRVFE 388

Query: 552  KMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTD--PNDITFIGVLSACNHSRLV 725
             M  K+    NAMI  LA HG  +++L++  +M K G D  PND+TF+GVLSAC H+ LV
Sbjct: 389  NMPVKNEVSWNAMISALAFHGRPQEALSLFERMSKEGRDACPNDVTFVGVLSACVHAGLV 448

Query: 726  EEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLS 905
            +EG   F  M   +GL+PK+EH +CMVDLL RAG L EA + ++ M   PD I+ GALL 
Sbjct: 449  DEGWQYFELMNSSYGLTPKIEHCSCMVDLLARAGQLYEAWDFIEKMPEKPDEIVLGALLG 508

Query: 906  ACRIHRNVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERGVKKP 1085
            AC+  +NVD+ +++  L+L  +  N G  ++ S IYA+  RW D A++R L+R+RGV K 
Sbjct: 509  ACQKRKNVDVGERVMQLLLQMEPSNSGNYVISSKIYANSRRWDDSAKMRVLMRQRGVNKT 568

Query: 1086 YGCSWIEIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPNFD 1232
             GCSWIEI++ +H FLA D     S +I++V   L  +MK EGY+P  D
Sbjct: 569  PGCSWIEIEAQLHEFLAGDGLQYHSIKIHQVFDLLNAEMKREGYIPKVD 617



 Score =  170 bits (431), Expect = 1e-39
 Identities = 95/244 (38%), Positives = 143/244 (58%)
 Frame = +3

Query: 189 ALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRP 368
           +LI MY++CG++  ARR+FDEIS ++LVSWN+MI+GY + G   EA+ LF  M+ +   P
Sbjct: 167 SLITMYARCGELGSARRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVP 226

Query: 369 NEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVF 548
           +E+T+V+VL AC  LG L LGR V  +   + + LN  +A++L+ MY KCG    A  VF
Sbjct: 227 DEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGDFVSARGVF 286

Query: 549 VKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVE 728
             M  KDV   NAMI G A +G   +++ +   M+  G  P+ IT +GVLSAC     ++
Sbjct: 287 DGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSACASIGALD 346

Query: 729 EGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLSA 908
            G+ +      + GL   +     +VD+  + G LD A  + +NM V  + + W A++SA
Sbjct: 347 LGK-RIDTYASQRGLQRNIFVSTALVDMYAKCGSLDNAQRVFENMPVK-NEVSWNAMISA 404

Query: 909 CRIH 920
              H
Sbjct: 405 LAFH 408



 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 87/335 (25%), Positives = 148/335 (44%), Gaps = 36/335 (10%)
 Frame = +3

Query: 153  VNAIPLNAILNTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGM-LEEAI 329
            +N+I     L + +ID+     +   A  LF +I   N  ++N MI G           +
Sbjct: 57   INSIQKPNFLLSKIIDL----NNFAYASLLFSQIPQPNDYAFNVMIRGLTTTWQHYSTTL 112

Query: 330  QLFYLMQAKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMY 509
              +Y M+   ++PN+ T   +  ACA L  L  G+  H  + R GLD++     SL+ MY
Sbjct: 113  HFYYQMKFLGLKPNKFTYPFLFIACANLLELSHGQAAHSSVFRLGLDVDSHTTHSLITMY 172

Query: 510  SKCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFI 689
            ++CG +  A  VF +++ +D+   N+MI G +  G   +++ +  +M + G  P+++T +
Sbjct: 173  ARCGELGSARRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVPDEMTLV 232

Query: 690  GVLSACNH------SRLVE----EGRVQFSNMVMKW-------------------GLSPK 782
             VL AC         R VE    E +++ ++ +                      G+  K
Sbjct: 233  SVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGDFVSARGVFDGMEGK 292

Query: 783  -VEHYACMVDLLGRAGYLDEAVELVQNMV---VSPDSIIWGALLSACRIHRNVDLADKIG 950
             V  +  M+    + G  DEA++L   M    V PD I    +LSAC     +DL  +I 
Sbjct: 293  DVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSACASIGALDLGKRI- 351

Query: 951  DLILSSQ--DPNLGFCILLSNIYASVGRWKDVARV 1049
            D   S +    N+     L ++YA  G   +  RV
Sbjct: 352  DTYASQRGLQRNIFVSTALVDMYAKCGSLDNAQRV 386


>ref|XP_007014358.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma
            cacao] gi|590581482|ref|XP_007014359.1| Pentatricopeptide
            repeat superfamily protein isoform 2 [Theobroma cacao]
            gi|590581490|ref|XP_007014361.1| Pentatricopeptide repeat
            superfamily protein isoform 2 [Theobroma cacao]
            gi|590581493|ref|XP_007014362.1| Pentatricopeptide repeat
            superfamily protein isoform 2 [Theobroma cacao]
            gi|508784721|gb|EOY31977.1| Pentatricopeptide repeat
            superfamily protein isoform 2 [Theobroma cacao]
            gi|508784722|gb|EOY31978.1| Pentatricopeptide repeat
            superfamily protein isoform 2 [Theobroma cacao]
            gi|508784724|gb|EOY31980.1| Pentatricopeptide repeat
            superfamily protein isoform 2 [Theobroma cacao]
            gi|508784725|gb|EOY31981.1| Pentatricopeptide repeat
            superfamily protein isoform 2 [Theobroma cacao]
          Length = 565

 Score =  359 bits (922), Expect = 1e-96
 Identities = 189/409 (46%), Positives = 263/409 (64%), Gaps = 2/409 (0%)
 Frame = +3

Query: 12   EMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILNTA 191
            E +GLF +M     V  P+  T+V             +GRWV  F   + I LN+ + +A
Sbjct: 157  EAVGLFGKMREEGFV--PDEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASA 214

Query: 192  LIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPN 371
            LI MY KCGD   AR +FD +  K++V+WNAMITGY Q GM +EAI+LF+ M+   V P+
Sbjct: 215  LIGMYGKCGDFVSARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPD 274

Query: 372  EITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFV 551
            +IT+V VLSACA +GAL LG+ +  Y  + GL  N+ ++T+LVDMY+KCGS+D+A  VF 
Sbjct: 275  KITLVGVLSACASIGALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKCGSLDNAQRVFE 334

Query: 552  KMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTD--PNDITFIGVLSACNHSRLV 725
             M  K+    NAMI  LA HG  +++L++  +M K G D  PND+TF+GVLSAC H+ LV
Sbjct: 335  NMPVKNEVSWNAMISALAFHGRPQEALSLFERMSKEGRDACPNDVTFVGVLSACVHAGLV 394

Query: 726  EEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLS 905
            +EG   F  M   +GL+PK+EH +CMVDLL RAG L EA + ++ M   PD I+ GALL 
Sbjct: 395  DEGWQYFELMNSSYGLTPKIEHCSCMVDLLARAGQLYEAWDFIEKMPEKPDEIVLGALLG 454

Query: 906  ACRIHRNVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERGVKKP 1085
            AC+  +NVD+ +++  L+L  +  N G  ++ S IYA+  RW D A++R L+R+RGV K 
Sbjct: 455  ACQKRKNVDVGERVMQLLLQMEPSNSGNYVISSKIYANSRRWDDSAKMRVLMRQRGVNKT 514

Query: 1086 YGCSWIEIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPNFD 1232
             GCSWIEI++ +H FLA D     S +I++V   L  +MK EGY+P  D
Sbjct: 515  PGCSWIEIEAQLHEFLAGDGLQYHSIKIHQVFDLLNAEMKREGYIPKVD 563



 Score =  170 bits (431), Expect = 1e-39
 Identities = 95/244 (38%), Positives = 143/244 (58%)
 Frame = +3

Query: 189 ALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRP 368
           +LI MY++CG++  ARR+FDEIS ++LVSWN+MI+GY + G   EA+ LF  M+ +   P
Sbjct: 113 SLITMYARCGELGSARRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVP 172

Query: 369 NEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVF 548
           +E+T+V+VL AC  LG L LGR V  +   + + LN  +A++L+ MY KCG    A  VF
Sbjct: 173 DEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGDFVSARGVF 232

Query: 549 VKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVE 728
             M  KDV   NAMI G A +G   +++ +   M+  G  P+ IT +GVLSAC     ++
Sbjct: 233 DGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSACASIGALD 292

Query: 729 EGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLSA 908
            G+ +      + GL   +     +VD+  + G LD A  + +NM V  + + W A++SA
Sbjct: 293 LGK-RIDTYASQRGLQRNIFVSTALVDMYAKCGSLDNAQRVFENMPVK-NEVSWNAMISA 350

Query: 909 CRIH 920
              H
Sbjct: 351 LAFH 354



 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 87/335 (25%), Positives = 148/335 (44%), Gaps = 36/335 (10%)
 Frame = +3

Query: 153  VNAIPLNAILNTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGM-LEEAI 329
            +N+I     L + +ID+     +   A  LF +I   N  ++N MI G           +
Sbjct: 3    INSIQKPNFLLSKIIDL----NNFAYASLLFSQIPQPNDYAFNVMIRGLTTTWQHYSTTL 58

Query: 330  QLFYLMQAKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMY 509
              +Y M+   ++PN+ T   +  ACA L  L  G+  H  + R GLD++     SL+ MY
Sbjct: 59   HFYYQMKFLGLKPNKFTYPFLFIACANLLELSHGQAAHSSVFRLGLDVDSHTTHSLITMY 118

Query: 510  SKCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFI 689
            ++CG +  A  VF +++ +D+   N+MI G +  G   +++ +  +M + G  P+++T +
Sbjct: 119  ARCGELGSARRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVPDEMTLV 178

Query: 690  GVLSACNH------SRLVE----EGRVQFSNMVMKW-------------------GLSPK 782
             VL AC         R VE    E +++ ++ +                      G+  K
Sbjct: 179  SVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGDFVSARGVFDGMEGK 238

Query: 783  -VEHYACMVDLLGRAGYLDEAVELVQNMV---VSPDSIIWGALLSACRIHRNVDLADKIG 950
             V  +  M+    + G  DEA++L   M    V PD I    +LSAC     +DL  +I 
Sbjct: 239  DVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSACASIGALDLGKRI- 297

Query: 951  DLILSSQ--DPNLGFCILLSNIYASVGRWKDVARV 1049
            D   S +    N+     L ++YA  G   +  RV
Sbjct: 298  DTYASQRGLQRNIFVSTALVDMYAKCGSLDNAQRV 332


>ref|XP_007014357.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
            cacao] gi|508784720|gb|EOY31976.1| Pentatricopeptide
            repeat superfamily protein isoform 1 [Theobroma cacao]
          Length = 656

 Score =  359 bits (922), Expect = 1e-96
 Identities = 189/409 (46%), Positives = 263/409 (64%), Gaps = 2/409 (0%)
 Frame = +3

Query: 12   EMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILNTA 191
            E +GLF +M     V  P+  T+V             +GRWV  F   + I LN+ + +A
Sbjct: 248  EAVGLFGKMREEGFV--PDEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASA 305

Query: 192  LIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPN 371
            LI MY KCGD   AR +FD +  K++V+WNAMITGY Q GM +EAI+LF+ M+   V P+
Sbjct: 306  LIGMYGKCGDFVSARGVFDGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPD 365

Query: 372  EITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFV 551
            +IT+V VLSACA +GAL LG+ +  Y  + GL  N+ ++T+LVDMY+KCGS+D+A  VF 
Sbjct: 366  KITLVGVLSACASIGALDLGKRIDTYASQRGLQRNIFVSTALVDMYAKCGSLDNAQRVFE 425

Query: 552  KMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTD--PNDITFIGVLSACNHSRLV 725
             M  K+    NAMI  LA HG  +++L++  +M K G D  PND+TF+GVLSAC H+ LV
Sbjct: 426  NMPVKNEVSWNAMISALAFHGRPQEALSLFERMSKEGRDACPNDVTFVGVLSACVHAGLV 485

Query: 726  EEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLS 905
            +EG   F  M   +GL+PK+EH +CMVDLL RAG L EA + ++ M   PD I+ GALL 
Sbjct: 486  DEGWQYFELMNSSYGLTPKIEHCSCMVDLLARAGQLYEAWDFIEKMPEKPDEIVLGALLG 545

Query: 906  ACRIHRNVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERGVKKP 1085
            AC+  +NVD+ +++  L+L  +  N G  ++ S IYA+  RW D A++R L+R+RGV K 
Sbjct: 546  ACQKRKNVDVGERVMQLLLQMEPSNSGNYVISSKIYANSRRWDDSAKMRVLMRQRGVNKT 605

Query: 1086 YGCSWIEIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPNFD 1232
             GCSWIEI++ +H FLA D     S +I++V   L  +MK EGY+P  D
Sbjct: 606  PGCSWIEIEAQLHEFLAGDGLQYHSIKIHQVFDLLNAEMKREGYIPKVD 654



 Score =  170 bits (431), Expect = 1e-39
 Identities = 95/244 (38%), Positives = 143/244 (58%)
 Frame = +3

Query: 189 ALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRP 368
           +LI MY++CG++  ARR+FDEIS ++LVSWN+MI+GY + G   EA+ LF  M+ +   P
Sbjct: 204 SLITMYARCGELGSARRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVP 263

Query: 369 NEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVF 548
           +E+T+V+VL AC  LG L LGR V  +   + + LN  +A++L+ MY KCG    A  VF
Sbjct: 264 DEMTLVSVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGDFVSARGVF 323

Query: 549 VKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVE 728
             M  KDV   NAMI G A +G   +++ +   M+  G  P+ IT +GVLSAC     ++
Sbjct: 324 DGMEGKDVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSACASIGALD 383

Query: 729 EGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLSA 908
            G+ +      + GL   +     +VD+  + G LD A  + +NM V  + + W A++SA
Sbjct: 384 LGK-RIDTYASQRGLQRNIFVSTALVDMYAKCGSLDNAQRVFENMPVK-NEVSWNAMISA 441

Query: 909 CRIH 920
              H
Sbjct: 442 LAFH 445



 Score = 94.4 bits (233), Expect = 1e-16
 Identities = 87/335 (25%), Positives = 148/335 (44%), Gaps = 36/335 (10%)
 Frame = +3

Query: 153  VNAIPLNAILNTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGM-LEEAI 329
            +N+I     L + +ID+     +   A  LF +I   N  ++N MI G           +
Sbjct: 94   INSIQKPNFLLSKIIDL----NNFAYASLLFSQIPQPNDYAFNVMIRGLTTTWQHYSTTL 149

Query: 330  QLFYLMQAKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMY 509
              +Y M+   ++PN+ T   +  ACA L  L  G+  H  + R GLD++     SL+ MY
Sbjct: 150  HFYYQMKFLGLKPNKFTYPFLFIACANLLELSHGQAAHSSVFRLGLDVDSHTTHSLITMY 209

Query: 510  SKCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFI 689
            ++CG +  A  VF +++ +D+   N+MI G +  G   +++ +  +M + G  P+++T +
Sbjct: 210  ARCGELGSARRVFDEISERDLVSWNSMISGYSKMGYANEAVGLFGKMREEGFVPDEMTLV 269

Query: 690  GVLSACNH------SRLVE----EGRVQFSNMVMKW-------------------GLSPK 782
             VL AC         R VE    E +++ ++ +                      G+  K
Sbjct: 270  SVLGACGDLGDLSLGRWVEGFAIEHKIKLNSFIASALIGMYGKCGDFVSARGVFDGMEGK 329

Query: 783  -VEHYACMVDLLGRAGYLDEAVELVQNMV---VSPDSIIWGALLSACRIHRNVDLADKIG 950
             V  +  M+    + G  DEA++L   M    V PD I    +LSAC     +DL  +I 
Sbjct: 330  DVVTWNAMITGYAQNGMSDEAIKLFHGMKDAGVIPDKITLVGVLSACASIGALDLGKRI- 388

Query: 951  DLILSSQ--DPNLGFCILLSNIYASVGRWKDVARV 1049
            D   S +    N+     L ++YA  G   +  RV
Sbjct: 389  DTYASQRGLQRNIFVSTALVDMYAKCGSLDNAQRV 423


>ref|XP_007206274.1| hypothetical protein PRUPE_ppa016070mg [Prunus persica]
            gi|462401916|gb|EMJ07473.1| hypothetical protein
            PRUPE_ppa016070mg [Prunus persica]
          Length = 608

 Score =  359 bits (921), Expect = 2e-96
 Identities = 184/423 (43%), Positives = 273/423 (64%), Gaps = 24/423 (5%)
 Frame = +3

Query: 57   VEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAI--PLNAILNTALIDMYSKCGDVEK 230
            V+P+   MV            +MG+ +  ++  N+    L   ++TALIDMY KCG++  
Sbjct: 107  VKPSEIAMVSMVNLFADVADREMGKAMHAYVVRNSTNEKLGVSISTALIDMYVKCGNLAY 166

Query: 231  ARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLM--------------------- 347
            ARR+FD ++ KN+VSW AMI GY+    L+E  +LF  M                     
Sbjct: 167  ARRVFDGLAQKNIVSWTAMIAGYIHCRNLQEGAKLFNRMLMERNYPNEITMLSLVIESGS 226

Query: 348  -QAKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGS 524
             +   VRP+++TMV+++S CA +GAL LG+ VH Y+ +  ++++VIL T+LVDMY+KCG 
Sbjct: 227  MKDSGVRPSQVTMVSLISLCAEVGALDLGKWVHSYINQQRMEVDVILRTALVDMYAKCGD 286

Query: 525  IDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSA 704
            +D A  +F + +N+D    NAM+ G A HG G+ +L +  QM++ G +PNDITFIGVL A
Sbjct: 287  MDMALRLFSEASNRDSCMWNAMMTGFAMHGCGKQALELFEQMDRQGVEPNDITFIGVLHA 346

Query: 705  CNHSRLVEEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSI 884
            C+H+ LV +G++ F  MV  +GL+PKVEHY CMVDLLGRAG LDEA +L+++M + P++I
Sbjct: 347  CSHAGLVADGKLLFEKMVHVYGLAPKVEHYGCMVDLLGRAGNLDEAHKLIKSMPMQPNTI 406

Query: 885  IWGALLSACRIHRNVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVR 1064
            +WGALL+AC+IH+N +LA+     +L  +  N G+ IL+SNIYA+  RW +V  VR+ ++
Sbjct: 407  VWGALLAACKIHKNPNLAEVAARELLELEPQNCGYNILMSNIYAASNRWNEVDGVRKYMK 466

Query: 1065 ERGVKKPYGCSWIEIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPNFDFVLK 1244
            +RG KK  G S IE++  VH F+  D  H Q+++IYE+   +T ++K  GY PN   VL+
Sbjct: 467  DRGTKKEPGLSSIEVNGSVHDFIMGDKAHPQTRKIYEMLAEMTKKLKEAGYTPNTSVVLQ 526

Query: 1245 NID 1253
            NID
Sbjct: 527  NID 529



 Score =  132 bits (332), Expect = 3e-28
 Identities = 83/290 (28%), Positives = 151/290 (52%), Gaps = 24/290 (8%)
 Frame = +3

Query: 123 MGRWVSVFIDVNAIPLNAILNTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYV 302
           +G+    F   N +  +  ++ ALI MYS+CG+V  AR LFD+++ +++VSW+ MI  YV
Sbjct: 28  LGKETHGFALKNGLDSDVFVSNALIQMYSECGNVVFARLLFDQMADRDVVSWSTMIRSYV 87

Query: 303 QRGMLEEAIQLFYLMQAKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLD--LN 476
           +  +  EA++L   M    V+P+EI MV++++  A +   ++G+ +H Y+ RN  +  L 
Sbjct: 88  RNRLFREALELIKEMHCMQVKPSEIAMVSMVNLFADVADREMGKAMHAYVVRNSTNEKLG 147

Query: 477 VILATSLVDMYSKCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQ--M 650
           V ++T+L+DMY KCG++  A  VF  +A K++    AMI G  H  N ++   +  +  M
Sbjct: 148 VSISTALIDMYVKCGNLAYARRVFDGLAQKNIVSWTAMIAGYIHCRNLQEGAKLFNRMLM 207

Query: 651 EKN--------------------GTDPNDITFIGVLSACNHSRLVEEGRVQFSNMVMKWG 770
           E+N                    G  P+ +T + ++S C     ++ G+   S  + +  
Sbjct: 208 ERNYPNEITMLSLVIESGSMKDSGVRPSQVTMVSLISLCAEVGALDLGKWVHS-YINQQR 266

Query: 771 LSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLSACRIH 920
           +   V     +VD+  + G +D A+ L      + DS +W A+++   +H
Sbjct: 267 MEVDVILRTALVDMYAKCGDMDMALRLFSE-ASNRDSCMWNAMMTGFAMH 315



 Score = 72.0 bits (175), Expect = 5e-10
 Identities = 53/218 (24%), Positives = 107/218 (49%), Gaps = 6/218 (2%)
 Frame = +3

Query: 345 MQAKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGS 524
           M+    + +  T+ +VL AC       LG+E H +  +NGLD +V ++ +L+ MYS+CG+
Sbjct: 1   MRRMDTQVDSFTIPSVLKACGQSSLAVLGKETHGFALKNGLDSDVFVSNALIQMYSECGN 60

Query: 525 IDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSA 704
           +  A L+F +MA++DV   + MI     +   R++L ++ +M      P++I  + +++ 
Sbjct: 61  VVFARLLFDQMADRDVVSWSTMIRSYVRNRLFREALELIKEMHCMQVKPSEIAMVSMVNL 120

Query: 705 CNHSRLVEEGRVQFSNMVM-----KWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVV 869
                  E G+   + +V      K G+S        ++D+  + G L  A  +   +  
Sbjct: 121 FADVADREMGKAMHAYVVRNSTNEKLGVSIS----TALIDMYVKCGNLAYARRVFDGL-A 175

Query: 870 SPDSIIWGALLSACRIHRNVDLADKIGDLILSSQD-PN 980
             + + W A+++     RN+    K+ + +L  ++ PN
Sbjct: 176 QKNIVSWTAMIAGYIHCRNLQEGAKLFNRMLMERNYPN 213


>ref|XP_006380676.1| hypothetical protein POPTR_0007s10370g [Populus trichocarpa]
            gi|550334566|gb|ERP58473.1| hypothetical protein
            POPTR_0007s10370g [Populus trichocarpa]
          Length = 631

 Score =  358 bits (919), Expect = 3e-96
 Identities = 177/367 (48%), Positives = 253/367 (68%), Gaps = 1/367 (0%)
 Frame = +3

Query: 156  NAIPLNAILN-TALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQ 332
            +A+P  ++++ TA+I  Y+K G +++AR LFD +  ++ + WN MI GY Q G+  E + 
Sbjct: 186  DAMPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLL 245

Query: 333  LFYLMQAKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYS 512
            LF  M    VRPNE+T++ VLSAC   GAL+ GR VH Y+  NG+ +NV + TSL+DMYS
Sbjct: 246  LFRQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYS 305

Query: 513  KCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIG 692
            KCGS++DA LVF +++NKDV   N+M++G A HG  +D+L +  +M   G  P DITFIG
Sbjct: 306  KCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIG 365

Query: 693  VLSACNHSRLVEEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVS 872
            VL+AC+H+ LV EG   F +M  ++G+ PKVEHY CMV+LLG AGYL+EA ELV+NM + 
Sbjct: 366  VLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGHAGYLEEAYELVKNMEID 425

Query: 873  PDSIIWGALLSACRIHRNVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVR 1052
             D ++WG LL ACR+H N+ L ++I + ++S    N G  +LLSNIYA+ G W+ VARVR
Sbjct: 426  QDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVR 485

Query: 1053 RLVRERGVKKPYGCSWIEIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPNFD 1232
             L++E G +K  GCS IE+++ VH FLA D  H +S+EIYE+ + +   +K  GY P  D
Sbjct: 486  TLMKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTD 545

Query: 1233 FVLKNID 1253
             VL +++
Sbjct: 546  IVLHDLE 552



 Score =  107 bits (268), Expect = 9e-21
 Identities = 66/204 (32%), Positives = 108/204 (52%), Gaps = 2/204 (0%)
 Frame = +3

Query: 12  EMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILNTA 191
           E L LF QML +   V PN  T++            + GRWV  +I+ N I +N  + T+
Sbjct: 242 EGLLLFRQMLNAK--VRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTS 299

Query: 192 LIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPN 371
           LIDMYSKCG +E AR +F+ IS K++V+WN+M+ GY   G  ++A++LF  M     +P 
Sbjct: 300 LIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPT 359

Query: 372 EITMVNVLSACAGLGALKLG-REVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVF 548
           +IT + VL+AC+  G +  G +  +      G++  V     +V++    G +++A  + 
Sbjct: 360 DITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGHAGYLEEAYELV 419

Query: 549 VKM-ANKDVAFCNAMILGLAHHGN 617
             M  ++D      ++     HGN
Sbjct: 420 KNMEIDQDPVLWGTLLGACRLHGN 443


>ref|XP_006429514.1| hypothetical protein CICLE_v10011209mg [Citrus clementina]
            gi|568855070|ref|XP_006481133.1| PREDICTED: putative
            pentatricopeptide repeat-containing protein
            At3g08820-like [Citrus sinensis]
            gi|557531571|gb|ESR42754.1| hypothetical protein
            CICLE_v10011209mg [Citrus clementina]
          Length = 688

 Score =  357 bits (916), Expect = 6e-96
 Identities = 169/417 (40%), Positives = 275/417 (65%)
 Frame = +3

Query: 3    NLVEMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAIL 182
            NL E + +F ++L     ++P++ ++V               +W+  +++   +  N  +
Sbjct: 195  NLEEAINMFRRLLHRG--LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGMGRNVFV 252

Query: 183  NTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSV 362
             T+L+D+Y+KCG++EKARR+FD++  K++VSW++MI GY   G  +EA+ +FY MQ +++
Sbjct: 253  ATSLVDLYAKCGNMEKARRVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENL 312

Query: 363  RPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACL 542
            +P+  TMV VLSACA LGAL+LG     ++ RN    N +L T+L+DMY+KCG +  AC 
Sbjct: 313  KPDRYTMVGVLSACASLGALELGVWASSFMERNEFLSNPVLGTTLIDMYAKCGRMAQACK 372

Query: 543  VFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRL 722
            VF +M +KD    NA++ GL+ +G  + +  +  Q+EK G  PN  TF+G+L  C H+ L
Sbjct: 373  VFREMKDKDQVVWNAVVSGLSMNGYVKVAFGVFGQLEKCGIQPNGNTFVGLLCGCTHAGL 432

Query: 723  VEEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALL 902
            V+EGR  F++M   + L+P +EHY CMVDLLGR+G LDEA EL+++M + P++I+WGALL
Sbjct: 433  VDEGRQFFNSMSRVFSLTPMIEHYGCMVDLLGRSGQLDEAHELIKSMPMEPNAIVWGALL 492

Query: 903  SACRIHRNVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERGVKK 1082
            + CR+H+  DLA+ + + +++ +  N G  +LLSNIY++  +W D A++R ++ ++G++K
Sbjct: 493  AGCRLHKKTDLAEHVLNQLIALEPWNSGNYVLLSNIYSASHKWNDAAKIRSMMGDKGIQK 552

Query: 1083 PYGCSWIEIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPNFDFVLKNID 1253
              GCSW+E+D +VH FL  D +H  S++IY     L  ++K  G+VP  D VL +I+
Sbjct: 553  IRGCSWVEVDGVVHEFLVGDNSHPLSEKIYSKLDELATKLKAAGFVPTTDHVLFDIE 609



 Score =  159 bits (402), Expect = 2e-36
 Identities = 87/253 (34%), Positives = 149/253 (58%)
 Frame = +3

Query: 180 LNTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKS 359
           + T+L+++Y  CG +  A ++FD+I  KN+VSW A+I+GY+  G LEEAI +F  +  + 
Sbjct: 151 VKTSLLNLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRG 210

Query: 360 VRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDAC 539
           ++P+  ++V VL+AC  LG L   + +H Y+   G+  NV +ATSLVD+Y+KCG+++ A 
Sbjct: 211 LKPDSFSIVRVLTACTQLGDLSTAKWIHGYVNEAGMGRNVFVATSLVDLYAKCGNMEKAR 270

Query: 540 LVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSR 719
            VF +M  KD+   ++MI G A +G  +++L +   M++    P+  T +GVLSAC    
Sbjct: 271 RVFDQMPEKDIVSWSSMIQGYASNGFPKEALDMFYNMQRENLKPDRYTMVGVLSACASLG 330

Query: 720 LVEEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGAL 899
            +E G    S M     LS  V     ++D+  + G + +A ++ + M    D ++W A+
Sbjct: 331 ALELGVWASSFMERNEFLSNPVLG-TTLIDMYAKCGRMAQACKVFREM-KDKDQVVWNAV 388

Query: 900 LSACRIHRNVDLA 938
           +S   ++  V +A
Sbjct: 389 VSGLSMNGYVKVA 401



 Score = 92.8 bits (229), Expect = 3e-16
 Identities = 63/254 (24%), Positives = 116/254 (45%)
 Frame = +3

Query: 141 VFIDVNAIPLNAILNTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLE 320
           V +D ++  LN +L +         G       +F +    N+  +N MI G+V     +
Sbjct: 42  VGLDQDSYLLNLLLRSCF-----HFGQTNYTHLIFSQTKEPNIFLYNTMIRGFVSNDCFQ 96

Query: 321 EAIQLFYLMQAKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLV 500
            AI+ +  M+ +   P   T   VL ACA     +LG   H  + + GLD +  + TSL+
Sbjct: 97  HAIEFYNSMRNEGFLPTNFTFPFVLKACAREHDFQLGVRSHSLIVKAGLDCDEFVKTSLL 156

Query: 501 DMYSKCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDI 680
           ++Y  CG + DA  VF  + +K+V    A+I G  + GN  +++ +  ++   G  P+  
Sbjct: 157 NLYVHCGYLADALKVFDDIPDKNVVSWTAIISGYINEGNLEEAINMFRRLLHRGLKPDSF 216

Query: 681 TFIGVLSACNHSRLVEEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQN 860
           + + VL+AC     +   +      V + G+   V     +VDL  + G +++A  +   
Sbjct: 217 SIVRVLTACTQLGDLSTAK-WIHGYVNEAGMGRNVFVATSLVDLYAKCGNMEKARRVFDQ 275

Query: 861 MVVSPDSIIWGALL 902
           M    D + W +++
Sbjct: 276 M-PEKDIVSWSSMI 288


>ref|XP_007047423.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
            cacao] gi|508699684|gb|EOX91580.1| Tetratricopeptide
            repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 633

 Score =  356 bits (913), Expect = 1e-95
 Identities = 179/355 (50%), Positives = 244/355 (68%)
 Frame = +3

Query: 186  TALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVR 365
            T ++  Y+K G++E+AR LFD +  K++V WN MI GY Q GM  EA+ LF  M A   R
Sbjct: 199  TTMLTCYAKHGELEEARLLFDGMVKKDVVCWNVMIDGYAQHGMPNEALVLFRRMLAAKAR 258

Query: 366  PNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLV 545
            PNEIT++ VLSACA LGAL+ GR +H Y+  N + +NV +AT+L+DMYSKCGS++DA LV
Sbjct: 259  PNEITILAVLSACAQLGALESGRWLHTYIDNNNIQVNVRVATALIDMYSKCGSLEDARLV 318

Query: 546  FVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLV 725
            F ++ +KDV   N+MI+G A HG  +++L +   M +    P DITFIGVL AC H+ LV
Sbjct: 319  FDRIPDKDVVAWNSMIIGYALHGFSQEALELFHGMCRTRLRPTDITFIGVLGACGHAGLV 378

Query: 726  EEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLS 905
             EG   F  M  ++G+ PK+EHY CMV+LLGRAG L+EA EL +NM + PD I+WGALL 
Sbjct: 379  NEGWSLFYAMKDEYGIEPKIEHYGCMVNLLGRAGRLEEAYELAKNMKIEPDPILWGALLG 438

Query: 906  ACRIHRNVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERGVKKP 1085
            ACR+H N+DL +KI + ++     N G  ILLSN+YA+ G W+ VAR+R L+++ GV+K 
Sbjct: 439  ACRLHGNIDLGEKIVEFLVGHNVANSGTYILLSNMYAAKGNWEGVARIRTLMKDSGVQKE 498

Query: 1086 YGCSWIEIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPNFDFVLKNI 1250
             GCS IE++S VH FLA D  H +S+EIY + + +   +K  GY P  D VL +I
Sbjct: 499  PGCSSIEVNSKVHEFLAGDLKHPKSKEIYTMLEEMNGWLKAHGYTPQTDIVLHDI 553



 Score =  112 bits (279), Expect = 5e-22
 Identities = 68/204 (33%), Positives = 106/204 (51%), Gaps = 2/204 (0%)
 Frame = +3

Query: 12  EMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILNTA 191
           E L LF +ML +     PN  T++            + GRW+  +ID N I +N  + TA
Sbjct: 244 EALVLFRRMLAAK--ARPNEITILAVLSACAQLGALESGRWLHTYIDNNNIQVNVRVATA 301

Query: 192 LIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPN 371
           LIDMYSKCG +E AR +FD I  K++V+WN+MI GY   G  +EA++LF+ M    +RP 
Sbjct: 302 LIDMYSKCGSLEDARLVFDRIPDKDVVAWNSMIIGYALHGFSQEALELFHGMCRTRLRPT 361

Query: 372 EITMVNVLSACAGLGALKLGREV-HLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVF 548
           +IT + VL AC   G +  G  + +      G++  +     +V++  + G +++A  + 
Sbjct: 362 DITFIGVLGACGHAGLVNEGWSLFYAMKDEYGIEPKIEHYGCMVNLLGRAGRLEEAYELA 421

Query: 549 VKM-ANKDVAFCNAMILGLAHHGN 617
             M    D     A++     HGN
Sbjct: 422 KNMKIEPDPILWGALLGACRLHGN 445



 Score =  102 bits (254), Expect = 4e-19
 Identities = 72/275 (26%), Positives = 129/275 (46%), Gaps = 27/275 (9%)
 Frame = +3

Query: 177 ILNTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAK 356
           ILN  L   YS  G ++ +  LF+     N+  + ++I  +   G+ +EA+ ++  M  +
Sbjct: 68  ILNFKLQRSYSSLGRLDYSLALFNRTLNPNIFFYTSIINAHALHGLSQEALFIYTRMLFE 127

Query: 357 SVRPNEITMVNVLSACA-------GLGALKLGREVHLYL--------GRNG--------- 464
            V+PNE T  ++L +C+          A+K G +  LY+         R G         
Sbjct: 128 GVQPNEFTFSSILKSCSFEHGKMLHSQAIKFGFDSDLYVKTGLVDVYARGGDIGSARLVF 187

Query: 465 ---LDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLA 635
              L+ +++  T+++  Y+K G +++A L+F  M  KDV   N MI G A HG   ++L 
Sbjct: 188 ERMLEKSLVSFTTMLTCYAKHGELEEARLLFDGMVKKDVVCWNVMIDGYAQHGMPNEALV 247

Query: 636 ILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFSNMVMKWGLSPKVEHYACMVDLL 815
           +  +M      PN+IT + VLSAC     +E GR      +    +   V     ++D+ 
Sbjct: 248 LFRRMLAAKARPNEITILAVLSACAQLGALESGR-WLHTYIDNNNIQVNVRVATALIDMY 306

Query: 816 GRAGYLDEAVELVQNMVVSPDSIIWGALLSACRIH 920
            + G L++A  LV + +   D + W +++    +H
Sbjct: 307 SKCGSLEDA-RLVFDRIPDKDVVAWNSMIIGYALH 340


>ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  355 bits (912), Expect = 2e-95
 Identities = 170/368 (46%), Positives = 251/368 (68%)
 Frame = +3

Query: 123  MGRWVSVFIDVNAIPLNAILNTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYV 302
            +G+W++ + +   +  +  L TAL+DMY+KCG+++KARRLFD +  +++V+W+AMI+GY 
Sbjct: 290  LGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYT 349

Query: 303  QRGMLEEAIQLFYLMQAKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVI 482
            Q     EA+ +F  MQ   V PN++TMV+VLSACA LGAL+ G+ VH Y+ R  L L VI
Sbjct: 350  QSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVI 409

Query: 483  LATSLVDMYSKCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNG 662
            L T+LVD Y+KCG I DA   F  M  ++     A+I G+A +G  R++L + + M +  
Sbjct: 410  LGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEAN 469

Query: 663  TDPNDITFIGVLSACNHSRLVEEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEA 842
             +P D+TFIGVL AC+H  LVEEGR  F++M   +G+ P++EHY CMVDLLGRAG +DEA
Sbjct: 470  IEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEA 529

Query: 843  VELVQNMVVSPDSIIWGALLSACRIHRNVDLADKIGDLILSSQDPNLGFCILLSNIYASV 1022
             + ++NM + P++++W ALLSAC +H+NV++ ++    I+     + G  ILLSN YASV
Sbjct: 530  YQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASV 589

Query: 1023 GRWKDVARVRRLVRERGVKKPYGCSWIEIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQM 1202
            G+WK+ A VR+ ++E+GV+K  GCS IE++  +  F AED+ H Q  EIYE    +   +
Sbjct: 590  GQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENI 649

Query: 1203 KVEGYVPN 1226
            K+ GY+PN
Sbjct: 650  KMVGYIPN 657



 Score =  154 bits (388), Expect = 1e-34
 Identities = 96/297 (32%), Positives = 156/297 (52%)
 Frame = +3

Query: 12   EMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILNTA 191
            + L LF++ML     V P+  T+              +GR V  +       ++  +  +
Sbjct: 153  DALHLFVEMLDDT-AVSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNS 211

Query: 192  LIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPN 371
            LI MY+ CGDV  A  LF  +  K +++WNAMI GYV+ G  +E +++F  M       +
Sbjct: 212  LIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFD 271

Query: 372  EITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFV 551
            E+T+++V +AC  LG   LG+ +  Y    G+  +  LAT+LVDMY+KCG +D A  +F 
Sbjct: 272  EVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFD 331

Query: 552  KMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEE 731
            +M ++DV   +AMI G       R++LAI  +M+    +PND+T + VLSAC     +E 
Sbjct: 332  RMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALET 391

Query: 732  GRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALL 902
            G+   S  + +  L   V     +VD   + G + +AV+  ++M V  ++  W AL+
Sbjct: 392  GKWVHS-YIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVR-NTWTWTALI 446



 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 1/176 (0%)
 Frame = +3

Query: 12  EMLGLFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILNTA 191
           E L +F +M      V PN  TMV            + G+WV  +I    +PL  IL TA
Sbjct: 356 EALAIFNEM--QGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTA 413

Query: 192 LIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPN 371
           L+D Y+KCG ++ A + F+ +  +N  +W A+I G    G   EA++LF  M   ++ P 
Sbjct: 414 LVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPT 473

Query: 372 EITMVNVLSACAGLGALKLGREVHLYLGRN-GLDLNVILATSLVDMYSKCGSIDDA 536
           ++T + VL AC+    ++ GR     + ++ G+   +     +VD+  + G ID+A
Sbjct: 474 DVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEA 529


>ref|XP_007030476.1| Tetratricopeptide repeat-like superfamily protein, putative
            [Theobroma cacao] gi|508719081|gb|EOY10978.1|
            Tetratricopeptide repeat-like superfamily protein,
            putative [Theobroma cacao]
          Length = 783

 Score =  355 bits (911), Expect = 2e-95
 Identities = 171/410 (41%), Positives = 266/410 (64%)
 Frame = +3

Query: 24   LFLQMLVSADVVEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILNTALIDM 203
            LF +M+   + ++PN  T++            ++G+ +  +I  N I ++  L TAL+DM
Sbjct: 297  LFARMI--EERIKPNEITLLSLVVECGFVGALELGKQIHAYISRNGICVSLALATALVDM 354

Query: 204  YSKCGDVEKARRLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITM 383
            Y KCG +  A+ +FD +  K+++ W+AMI  Y Q   +++A+ LF  M+   VRPN++TM
Sbjct: 355  YGKCGQIRNAKAVFDTVKNKDVMIWSAMIAAYAQAHCIDQALDLFVKMRDSGVRPNQVTM 414

Query: 384  VNVLSACAGLGALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMAN 563
            V VLS CA  GAL +G+ VH Y+ R  +++++IL T+L++MY+KCG ID A  +F +  +
Sbjct: 415  VTVLSLCAEAGALDMGKWVHTYIDRQVVEMDMILQTALIEMYAKCGDIDGAWRLFRESKD 474

Query: 564  KDVAFCNAMILGLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQ 743
            +D+   N M+ G   HG G+++L + ++ME+ G  PNDITFIG+L AC+H+ LV+EGR+ 
Sbjct: 475  QDIGMWNTMMAGFGMHGCGKEALELFSEMERVGARPNDITFIGLLHACSHAGLVKEGRLF 534

Query: 744  FSNMVMKWGLSPKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLSACRIHR 923
            F  MV  +GL PKVEHY CMVDLLGRAG LDEA E++++M + P++I W ALL+AC++H+
Sbjct: 535  FEKMVHDFGLVPKVEHYGCMVDLLGRAGLLDEAYEMIKSMPIRPNTITWSALLAACKLHK 594

Query: 924  NVDLADKIGDLILSSQDPNLGFCILLSNIYASVGRWKDVARVRRLVRERGVKKPYGCSWI 1103
            N  L +     ++  +  N G+ + +SNIYA   RW DVA VR+ ++ +G+KK  G S I
Sbjct: 595  NTVLGEMAARQLVYLEPQNCGYNVSMSNIYAVANRWNDVAGVRKAMKNKGMKKEPGLSSI 654

Query: 1104 EIDSIVHRFLAEDTTHLQSQEIYEVHQNLTYQMKVEGYVPNFDFVLKNID 1253
            E+D  VH F+  D  H Q ++I ++   +  ++K  GY+ +   VLKNID
Sbjct: 655  EVDGYVHEFIMGDKAHPQIEKINDMVSEIGKKLKEAGYMADTSAVLKNID 704



 Score =  162 bits (409), Expect = 4e-37
 Identities = 91/288 (31%), Positives = 155/288 (53%)
 Frame = +3

Query: 57   VEPNAATMVXXXXXXXXXXXXKMGRWVSVFIDVNAIPLNAILNTALIDMYSKCGDVEKAR 236
            V P+   M+            +MGR +  ++  N   +   L TA IDMY+K G++  A 
Sbjct: 205  VRPSEVAMISMVNLFAELKDIEMGRAMHAYVTRNLEKMGVHLTTAFIDMYAKSGNLASAG 264

Query: 237  RLFDEISCKNLVSWNAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVNVLSACAGLG 416
             LF  ++ K++VSW AMI GY+    LEE  +LF  M  + ++PNEIT+++++  C  +G
Sbjct: 265  LLFHGLNQKSIVSWTAMIAGYIHCNKLEEGGKLFARMIEERIKPNEITLLSLVVECGFVG 324

Query: 417  ALKLGREVHLYLGRNGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVAFCNAMIL 596
            AL+LG+++H Y+ RNG+ +++ LAT+LVDMY KCG I +A  VF  + NKDV   +AMI 
Sbjct: 325  ALELGKQIHAYISRNGICVSLALATALVDMYGKCGQIRNAKAVFDTVKNKDVMIWSAMIA 384

Query: 597  GLAHHGNGRDSLAILTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFSNMVMKWGLS 776
              A       +L +  +M  +G  PN +T + VLS C  +  ++ G+      + +  + 
Sbjct: 385  AYAQAHCIDQALDLFVKMRDSGVRPNQVTMVTVLSLCAEAGALDMGK-WVHTYIDRQVVE 443

Query: 777  PKVEHYACMVDLLGRAGYLDEAVELVQNMVVSPDSIIWGALLSACRIH 920
              +     ++++  + G +D A  L +      D  +W  +++   +H
Sbjct: 444  MDMILQTALIEMYAKCGDIDGAWRLFRES-KDQDIGMWNTMMAGFGMH 490



 Score =  137 bits (345), Expect = 1e-29
 Identities = 85/306 (27%), Positives = 157/306 (51%), Gaps = 4/306 (1%)
 Frame = +3

Query: 120  KMGRWVSVFIDVNAIPLNAILNTALIDMYSKCGDVEKARRLFDEISCKNLVSWNAMITGY 299
            ++G+ +  F   N +  +  ++ ALI MYS+C     AR LFD +  +++VSW+ MI  Y
Sbjct: 125  QLGKEIHGFALKNGLIEDVFVSNALIQMYSECRSAVSARLLFDNMDERDVVSWSTMIRSY 184

Query: 300  VQRGMLEEAIQLFYLMQAKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGRNGLDLNV 479
            V+  +  EA+ +   M    VRP+E+ M+++++  A L  +++GR +H Y+ RN   + V
Sbjct: 185  VRSKLYREALDIVRKMHILQVRPSEVAMISMVNLFAELKDIEMGRAMHAYVTRNLEKMGV 244

Query: 480  ILATSLVDMYSKCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAILTQMEKN 659
             L T+ +DMY+K G++  A L+F  +  K +    AMI G  H     +   +  +M + 
Sbjct: 245  HLTTAFIDMYAKSGNLASAGLLFHGLNQKSIVSWTAMIAGYIHCNKLEEGGKLFARMIEE 304

Query: 660  GTDPNDITFIGVLSACNHSRLVEEGRVQFSNMVMKWGLSPKVEHYACMVDLLGRAGYLDE 839
               PN+IT + ++  C     +E G+ Q    + + G+   +     +VD+ G+ G +  
Sbjct: 305  RIKPNEITLLSLVVECGFVGALELGK-QIHAYISRNGICVSLALATALVDMYGKCGQIRN 363

Query: 840  AVELVQNMVVSPDSIIWGALLSACRIHRNVDLADKIGDLILSSQD----PNLGFCILLSN 1007
            A + V + V + D +IW A+++A   +      D+  DL +  +D    PN    + + +
Sbjct: 364  A-KAVFDTVKNKDVMIWSAMIAA---YAQAHCIDQALDLFVKMRDSGVRPNQVTMVTVLS 419

Query: 1008 IYASVG 1025
            + A  G
Sbjct: 420  LCAEAG 425



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 3/219 (1%)
 Frame = +3

Query: 279 NAMITGYVQRGMLEEAIQLFYLMQAKSVRPNEITMVNVLSACAGLGALKLGREVHLYLGR 458
           N +IT Y +       + ++  ++      +   +  +L AC+ +   +LG+E+H +  +
Sbjct: 77  NFLITSYTRNSQPHNTLAIYAYLRRTDYEVDNFMVPAILKACSFVSMTQLGKEIHGFALK 136

Query: 459 NGLDLNVILATSLVDMYSKCGSIDDACLVFVKMANKDVAFCNAMILGLAHHGNGRDSLAI 638
           NGL  +V ++ +L+ MYS+C S   A L+F  M  +DV   + MI         R++L I
Sbjct: 137 NGLIEDVFVSNALIQMYSECRSAVSARLLFDNMDERDVVSWSTMIRSYVRSKLYREALDI 196

Query: 639 LTQMEKNGTDPNDITFIGVLSACNHSRLVEEGRVQFSNM---VMKWGLSPKVEHYACMVD 809
           + +M      P+++  I +++     + +E GR   + +   + K G    V      +D
Sbjct: 197 VRKMHILQVRPSEVAMISMVNLFAELKDIEMGRAMHAYVTRNLEKMG----VHLTTAFID 252

Query: 810 LLGRAGYLDEAVELVQNMVVSPDSIIWGALLSACRIHRN 926
           +  ++G L  A  L   +  +  SI+    + A  IH N
Sbjct: 253 MYAKSGNLASAGLLFHGL--NQKSIVSWTAMIAGYIHCN 289


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